Ec-00_002470.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002470.1
Unique NameEc-00_002470.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length192
Homology
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BLAST of Ec-00_002470.1 vs. uniprot
Match: D7FL18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL18_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 1.040e-133
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1 
Query:   34 MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGLMKHRCFFLSSDLQDIGTHAWLFIFSGALRRASTTALFSTMCHLPSL 606
            MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGLMKHRCFFLSSDLQDIGTHAWLFIFSGALRRASTTALFSTMCHLPSL
Sbjct:    1 MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGLMKHRCFFLSSDLQDIGTHAWLFIFSGALRRASTTALFSTMCHLPSL 191
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BLAST of Ec-00_002470.1 vs. uniprot
Match: D8LC64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC64_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 6.130e-74
Identity = 125/145 (86.21%), Postives = 125/145 (86.21%), Query Frame = 1 
Query:   31 FMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETG 465
             MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKP                   LYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETG
Sbjct:   29 LMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKP-------------------LYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETG 154
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BLAST of Ec-00_002470.1 vs. uniprot
Match: A0A6H5KKI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI2_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.060e-66
Identity = 116/149 (77.85%), Postives = 120/149 (80.54%), Query Frame = 1 
Query:   34 MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGLMKHR 480
            MTNDMGLLD +G LPSISAAFLNPKG                     YLVDCPLSVADSLKTHLKLYKLRSKV+IKDATALYDVLVSGVRDPWQAPEREGGGD+SPAAAG LG GAGGGREARFPDPRSAALGVRLIRPK ETG+   R
Sbjct:    1 MTNDMGLLDGDGGLPSISAAFLNPKG---------------------YLVDCPLSVADSLKTHLKLYKLRSKVKIKDATALYDVLVSGVRDPWQAPEREGGGDMSPAAAGHLG-GAGGGREARFPDPRSAALGVRLIRPKGETGVCDFR 127
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BLAST of Ec-00_002470.1 vs. uniprot
Match: F0Y579_AURAN (GCV_T domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y579_AURAN)

HSP 1 Score: 70.9 bits (172), Expect = 4.290e-11
Identity = 49/123 (39.84%), Postives = 62/123 (50.41%), Query Frame = 1 
Query:   76 PSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLI 444
            P ++AAFLN KGRV+ADA++ R       G    LVDCP S A +L  HLK+YKLRS V++K   A  D+ V+    P  A      GDV    A                DPR+A LG R +
Sbjct:   34 PGLAAAFLNTKGRVLADAVLWRD------GAEDILVDCPASAAKALLRHLKMYKLRSDVKLK---ARDDLAVATFASPDAAAAAVAAGDVVAGGA----------------DPRTALLGGRCV 131
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BLAST of Ec-00_002470.1 vs. uniprot
Match: UPI001BA5F1E2 (folate-binding protein YgfZ n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BA5F1E2)

HSP 1 Score: 69.7 bits (169), Expect = 9.930e-11
Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 1 
Query:    7 RCEGAAARFMTNDMGLLDENGRLPSIS--AAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKD 456
            +  G  AR   N++   D +   P ++   A L P+G+++AD L+T +P     G   +L+DCPL +AD+L T L  YKLR+KV + + +    VL       W         D +PA    L           FPDPR  ALG R++ P+D
Sbjct:   13 KVSGDDARSFLNNLVTSDIDQVRPGVARFGALLTPQGKIVADFLITEAPIGHGGG---FLLDCPLPLADALATKLGFYKLRAKVAVDNLSGGLGVLAV-----W---------DGAPATPPDL----------AFPDPRLEALGWRILVPQD 137
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BLAST of Ec-00_002470.1 vs. uniprot
Match: A0A7S3YL60_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL60_HETAK)

HSP 1 Score: 65.1 bits (157), Expect = 6.510e-10
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 1 
Query:   31 FMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKG--KPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRD 306
             +TND+  LD  G   SI+AAFL  KGR   DA++T        G  +  YLVDCP +    L  HLK YKLRSKV+I+D +   +V+ +   +
Sbjct:   57 LITNDIRTLD-GGVDKSIAAAFLTTKGRCFTDAIITAVVDDSGNGATEQSYLVDCPEAHRAELLRHLKRYKLRSKVQIRDRSPHLEVVAAAAAE 149
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BLAST of Ec-00_002470.1 vs. uniprot
Match: UPI00046690DC (folate-binding protein YgfZ n=1 Tax=Bradyrhizobium sp. Tv2a-2 TaxID=113395 RepID=UPI00046690DC)

HSP 1 Score: 65.1 bits (157), Expect = 4.400e-9
Identity = 43/152 (28.29%), Postives = 69/152 (45.39%), Query Frame = 1 
Query:    7 RCEGAAARFMTNDMGLLDENGRLPSIS--AAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKD 456
            +  G  AR   N +   D     P ++   A L P+G++I D L+T +P   A    G+L DCP  +A +L   L+ YKLR+KV +++ +    V+ +   +P   P+                          F DPRS ALG R++ P++
Sbjct:   13 KVSGEDARNFLNGLVTSDVTELKPGVAKFGALLTPQGKIIVDFLITEAP---AGHGGGFLFDCPRPLAQALTDKLRFYKLRAKVTLENLSESLGVIAAWGGEPAMQPD------------------------LTFADPRSPALGYRILAPQE 137
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BLAST of Ec-00_002470.1 vs. uniprot
Match: Q1QGF9_NITHX (Glycine cleavage T protein (Aminomethyl transferase) n=3 Tax=Nitrobacter TaxID=911 RepID=Q1QGF9_NITHX)

HSP 1 Score: 64.7 bits (156), Expect = 6.020e-9
Identity = 46/153 (30.07%), Postives = 68/153 (44.44%), Query Frame = 1 
Query:    7 RCEGAAARFMTNDMGLLDENGRLPSIS--AAFLNPKGRVIADALVTRS-PRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKD 456
            +  G  AR   N +   D     P      A L P+G++  D L+T + P H      G+L+DCPLS+A SL T L  YKLR+KV + + ++   VL +   +P   P+                          F DPRS  LG R++ P++
Sbjct:   13 KVSGDDARNFLNGLVTTDVTKIQPGFGRFGALLTPQGKITFDFLITEAQPGHGG----GFLIDCPLSLAQSLATKLGFYKLRAKVTVDNISSTLGVLAAWDGEPAMKPD------------------------LTFADPRSDRLGWRILAPEE 137
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BLAST of Ec-00_002470.1 vs. uniprot
Match: X0XDU6_9ZZZZ (GCV_T domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XDU6_9ZZZZ)

HSP 1 Score: 60.1 bits (144), Expect = 2.090e-8
Identity = 34/96 (35.42%), Postives = 54/96 (56.25%), Query Frame = 1 
Query:    7 RCEGAAARFMTNDMGLLDENGRLPSIS--AAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVL 288
            +  G  AR   N++   D +   P ++   A L P+G+++AD L+T +P     G   +L+DCPL +AD+L T L  YKLR+KV + + +    VL
Sbjct:   13 KVSGDDARSFLNNLVTSDIDQVRPGVARFGALLTPQGKIVADFLITEAPTGHGGG---FLLDCPLPLADALATKLGFYKLRAKVAVDNLSGGLGVL 105
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BLAST of Ec-00_002470.1 vs. uniprot
Match: W9H994_9PROT (Glycine cleavage system protein T n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9H994_9PROT)

HSP 1 Score: 63.2 bits (152), Expect = 2.150e-8
Identity = 49/141 (34.75%), Postives = 69/141 (48.94%), Query Frame = 1 
Query:   31 FMTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLVDCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREGGGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPK 453
             +TND+  +   G   ++ +AFL P+G+ + D  ++     E  G+   L+DC       L+  LK+YKLRSK+ ++DATA Y V         +A     G    P AA  LG G        F DPR AALG R I P+
Sbjct:   28 LVTNDVTKV---GPSQAVYSAFLTPQGKYLHDFTIS-----EVDGR--LLLDCEAERLADLQRRLKMYKLRSKITLEDATAAYSVTALFGEGALEAV----GLTAEPGAAAPLGGG------VVFTDPRLAALGARAILPR 148
The following BLAST results are available for this feature:
BLAST of Ec-00_002470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL18_ECTSI1.040e-133100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LC64_ECTSI6.130e-7486.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKI2_9PHAE1.060e-6677.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y579_AURAN4.290e-1139.84GCV_T domain-containing protein n=1 Tax=Aureococcu... [more]
UPI001BA5F1E29.930e-1132.89folate-binding protein YgfZ n=1 Tax=unclassified B... [more]
A0A7S3YL60_HETAK6.510e-1041.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI00046690DC4.400e-928.29folate-binding protein YgfZ n=1 Tax=Bradyrhizobium... [more]
Q1QGF9_NITHX6.020e-930.07Glycine cleavage T protein (Aminomethyl transferas... [more]
X0XDU6_9ZZZZ2.090e-835.42GCV_T domain-containing protein (Fragment) n=1 Tax... [more]
W9H994_9PROT2.150e-834.75Glycine cleavage system protein T n=1 Tax=Skermane... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2717422..2718942 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.1
Seed ortholog evalue1.4e-59
Seed eggNOG ortholog2880.D8LC64
Preferred nameCAF17
Length610
KEGG rclassRC00002,RC00004,RC00014
KEGG koko:K01897,ko:K12613,ko:K14806,ko:K22073
KEGG TC4.C.1.1
KEGG ReactionR01280,R10815
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03018,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03018,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086,M00395
Hectar predicted targeting categoryother localisation
Gene idEc-00_002470.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044572,GO:0051186,GO:0070013,GO:0071840
EggNOG free text desc.metallo-sulfur cluster assembly
EggNOG OGsCOG0354@1,KOG2929@2759
EC3.6.1.62,3.6.4.13,6.2.1.3
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko01009,ko03009,ko03019,ko03029,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002470Ec-00_002470Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2717422..2718942 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002470.1Ec-00_002470.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2717422..2718908 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002470.1.4Ec-00_002470.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2717422..2717567 -
Ec-00_002470.1.3Ec-00_002470.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2717851..2718142 -
Ec-00_002470.1.2Ec-00_002470.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2718476..2718538 -
Ec-00_002470.1.1Ec-00_002470.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2718834..2718942 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002470.1CDS:Ec-00_002470.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2717422..2717567 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0024705UTR:Ec-00_002470.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 2718909..2718942 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002470.1 ID=Ec-00_002470.1|Name=Ec-00_002470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=192bp
MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLV
DCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREG
GGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGLMKHRC
FFLSSDLQDIGTHAWLFIFSGALRRASTTALFSTMCHLPSL*
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spliced messenger RNA

>Ec-00_002470.1 ID=Ec-00_002470.1|Name=Ec-00_002470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=610bp|location=Sequence derived from alignment at chr_00:2717422..2718942- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGGGGTCGATGCGAAGGCGCTGCTGCAAGGTTTGATGACCAACGACATGG
GTCTTCTGGATGAGAACGGCAGACTTCCGAGCATATCGGCGGCGTTCCTC
AACCCCAAGGGACGCGTGATAGCCGACGCGTTGGTGACGAGAAGCCCCCG
ACACGAGGCGAAGGGGAAGCCGGGATATCTGGTGGATTGCCCGCTATCCG
TTGCAGATAGCCTGAAGACCCACCTCAAGCTTTACAAGCTGAGGTCCAAG
GTCAGGATAAAGGACGCTACGGCTCTGTACGACGTTTTGGTGTCGGGAGT
GCGAGACCCCTGGCAGGCGCCTGAGAGGGAGGGAGGAGGGGACGTGTCCC
CTGCGGCAGCGGGACGTTTGGGTGATGGTGCTGGTGGTGGCCGGGAGGCC
CGTTTTCCGGATCCGCGGAGCGCCGCGCTTGGAGTGCGGCTGATTCGACC
GAAGGACGAAACCGGTCTGATGAAACATCGATGTTTTTTTTTAAGTTCAG
ATTTGCAGGATATCGGAACTCACGCATGGCTCTTTATTTTTAGCGGCGCC
CTTCGTAGAGCCAGCACCACCGCCCTGTTTTCAACGATGTGTCATCTACC
ATCTCTCTAA
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protein sequence of Ec-00_002470.1

>Ec-00_002470.1 ID=Ec-00_002470.1|Name=Ec-00_002470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=192bp
MTNDMGLLDENGRLPSISAAFLNPKGRVIADALVTRSPRHEAKGKPGYLV
DCPLSVADSLKTHLKLYKLRSKVRIKDATALYDVLVSGVRDPWQAPEREG
GGDVSPAAAGRLGDGAGGGREARFPDPRSAALGVRLIRPKDETGLMKHRC
FFLSSDLQDIGTHAWLFIFSGALRRASTTALFSTMCHLPSL*
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mRNA from alignment at chr_00:2717422..2718942-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002470.1 ID=Ec-00_002470.1|Name=Ec-00_002470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1521bp|location=Sequence derived from alignment at chr_00:2717422..2718942- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGGGGTCGATGCGAAGGCGCTGCTGCAAGGTTTGATGACCAACGACATGG
GTCTTCTGGATGAGAACGGCAGACTTCCGAGCATATCGGCGGCGTTCCTC
AACCCCAAGGTAACAGCAGTACCAATTTGCTGCTGTCTACGAGCTATTTT
GTGGAAGAAAATTACCGTGCGCAGAGCGCGGGAGTCTTCGTGATGCGGGG
GGCGGGTTTGGTTGTTGCCCGGATGATTCACACGGGGTTTGCACCCCTGC
TCTCTCCACGCGTGCATTCAAGCACGCTCCTGCGTGACGCGCATATGTTG
GCACCTTATGGATCCTGTGTGTGAATGAAGAGTAAGCACGTGTTCGCTCG
TTTCGTCTAATGCCGCTGTAACGTTGGTGCGTTTCGCTCACAACAATGCC
ACAGGGACGCGTGATAGCCGACGCGTTGGTGACGAGAAGCCCCCGACACG
AGGCGAAGGGGAAGCCGGTGAGAATCCGAAATAATAGAAGTAGTTTTCTT
GGCACGCTAGAGTAGATGGCAGTGACTACCCTCGCCCGTCTTAGGCCTGT
CCTCGATAGGCGATTGCCTGATACGTTCGCTGTCGATTTTTGTGAACATG
CTGAAAATAGAGTAGAGGAAAAGTTAAGTGTATCTAAATCGCGAACGAGG
ACAGGCCTAGCCCGTCTGTTGATGTTGTCAATTGCCCTATTTCGTTCTCC
CGCAAGATGATTTCCACAAATTGTGTCCGAACCTGACCGTGGGCGAGAAG
TTCCAAACTCCCTTGATATGATATCCCAACCCCCCCCCCCCCCCCCCCAG
GGATATCTGGTGGATTGCCCGCTATCCGTTGCAGATAGCCTGAAGACCCA
CCTCAAGCTTTACAAGCTGAGGTCCAAGGTCAGGATAAAGGACGCTACGG
CTCTGTACGACGTTTTGGTGTCGGGAGTGCGAGACCCCTGGCAGGCGCCT
GAGAGGGAGGGAGGAGGGGACGTGTCCCCTGCGGCAGCGGGACGTTTGGG
TGATGGTGCTGGTGGTGGCCGGGAGGCCCGTTTTCCGGATCCGCGGAGCG
CCGCGCTTGGAGTGCGGCTGATTCGACCGAAGGACGAAACCGGTGTGTAT
GATGTCTGAGACAAGGCGGTGGGATGCAGCCTAGTGCCGCCAGTCTACAG
TAGGCTGCATCGTATTTGCCAATTTTGGGGCCAGTACACCAGTTGTTCGT
TTCTATTTTTCTGCGCTGGGTCCCGGCGGCCTTAGCTTCGTACCGTACCT
TGGAAGGCTTTTGCCGCCCTTCGGATAGTTCTACTTAATTCGATCGCCGC
ACACCCTCCGTCCTCTACCCTGGCCAAGATAGCTTGCTGTTCGTTCGCTT
CTCTTTTCCTCGCTGCATGCCTCAGGTCTGATGAAACATCGATGTTTTTT
TTTAAGTTCAGATTTGCAGGATATCGGAACTCACGCATGGCTCTTTATTT
TTAGCGGCGCCCTTCGTAGAGCCAGCACCACCGCCCTGTTTTCAACGATG
TGTCATCTACCATCTCTCTAA
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Coding sequence (CDS) from alignment at chr_00:2717422..2718942-

>Ec-00_002470.1 ID=Ec-00_002470.1|Name=Ec-00_002470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=576bp|location=Sequence derived from alignment at chr_00:2717422..2718942- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACCAACGACATGGGTCTTCTGGATGAGAACGGCAGACTTCCGAGCAT
ATCGGCGGCGTTCCTCAACCCCAAGGGACGCGTGATAGCCGACGCGTTGG
TGACGAGAAGCCCCCGACACGAGGCGAAGGGGAAGCCGGGATATCTGGTG
GATTGCCCGCTATCCGTTGCAGATAGCCTGAAGACCCACCTCAAGCTTTA
CAAGCTGAGGTCCAAGGTCAGGATAAAGGACGCTACGGCTCTGTACGACG
TTTTGGTGTCGGGAGTGCGAGACCCCTGGCAGGCGCCTGAGAGGGAGGGA
GGAGGGGACGTGTCCCCTGCGGCAGCGGGACGTTTGGGTGATGGTGCTGG
TGGTGGCCGGGAGGCCCGTTTTCCGGATCCGCGGAGCGCCGCGCTTGGAG
TGCGGCTGATTCGACCGAAGGACGAAACCGGTCTGATGAAACATCGATGT
TTTTTTTTAAGTTCAGATTTGCAGGATATCGGAACTCACGCATGGCTCTT
TATTTTTAGCGGCGCCCTTCGTAGAGCCAGCACCACCGCCCTGTTTTCAA
CGATGTGTCATCTACCATCTCTCTAA
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Synonyms
The feature 'Ec-00_002470.1' has the following synonyms
Synonym
Esi1515_0001
Esi_1515_0001