Ec-00_001930.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001930.2
Unique NameEc-00_001930.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length163
Homology
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BLAST of Ec-00_001930.2 vs. uniprot
Match: D8LEE0_ECTSI (DUF2431 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE0_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 1.310e-104
Identity = 270/431 (62.65%), Postives = 289/431 (67.05%), Query Frame = 3 
Query:  357 GNGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQL-HTL*------TLPGSRKPS*GPVKAGEMTGVEAELLERRREFCSIASSSTXXXXXXXXXXXXXXXXXXXXXXXGIGEVRGGRGRGARYPQGQASVLGLECEAMARESELIMVRCLAFDPSVFPGYRHSTTDPQQRNSTREGPGRT---CSAGR--DPSLTTSG*VRRLPGDSATGGSSLLCELS*DCQQHRRQQRFRRQRLRYDHSSEDDNASDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKTGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD 1613
            G GAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQ+ H++       TL G+ +        G + G +  +L  R  F      +                        G+ +     G      + +    G   +AMARESELIMVRCLAFDPSVFPGYRHSTTDPQ +     G  RT   C A    D ++  SG     P     GG++                                   DNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKTGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD
Sbjct:   98 GTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVF------NFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGG-ARTNVFCRARSELDDNVDESG---AFPVIVRRGGAASSANSVETXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKTGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD 518
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BLAST of Ec-00_001930.2 vs. uniprot
Match: D8LED8_ECTSI (DUF2431 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED8_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.520e-40
Identity = 121/264 (45.83%), Postives = 139/264 (52.65%), Query Frame = 1 
Query:   67 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPG---RLQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTELVSWRRPWTPRKLYSRSTRELRLGSPNLKPTEPSCTLCRRYQARGNPPRGR*RPGR*RGWRRSCWREDASFVRSRRLQLPPHRCPEDTPQP*PHPRLLRQH---------QGLVKCAAAGGEVHVTLKDKPPYSGWNVRQWRGKAS*SW*GALPSTHRCFP 822
            MGKFRGHQD+S RGRE K+LKKK G A GGI A AAQAES V GGDSL S +PG   + QQR  VG KRKLKHVTYAKEHSVL+VGDG FSF    + HRGT            K   +   +     P L+   P        QAR NP RG        GWR     E    V   + ++  HR   + P        L +          +GLVKCAA GG VHVTLKDKPP+SGWN     GK +    G +P     FP
Sbjct:    1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHA-AAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGP--------QARENPSRG--------GWRP----EGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNV-EGKRADH--GGVPGDPSVFP 239
[Close]
BLAST of Ec-00_001930.2 vs. uniprot
Match: A0A836CCP6_9STRA (DUF2431 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.100e-9
Identity = 35/71 (49.30%), Postives = 42/71 (59.15%), Query Frame = 2 
Query:  467 VAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTRDW 679
            V H VDATRLE+ +                   + + LFDRVVFNFPHTG QR HLNRNL+R+FF S R +
Sbjct:  140 VLHGVDATRLEQAV-------------------RPQQLFDRVVFNFPHTGEQRVHLNRNLLRNFFRSARGY 191
[Close]
BLAST of Ec-00_001930.2 vs. uniprot
Match: A0A1V9ZF63_9STRA (DUF2431 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZF63_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.010e-9
Identity = 67/216 (31.02%), Postives = 91/216 (42.13%), Query Frame = 2 
Query:  401 SCTQEVPAS*DLAPQT*SRRSPVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTRDW*SARRPGE-RCTLPSRTSLRTRAGM*GNGEGKRADHGEV-PCLRPIGVSRLPPQHNR---PSAKKFDAGGARTNVFCRARSELDDKWMSQAPSR**CDGGEQPPLRTQLRLPTTPATATIPTT 1033
            SC Q + A+          ++ V HSVDAT+L +                    +    LFD ++FNFPH+G QR H+NR L+ DFF S R   + R  GE   TL ++           N E +   HG V    RP  +   P  H+R   P AKKF+     T VF   RS          PS         PP  T +  P+TP  + +P+T
Sbjct:   87 SCIQSISAA----------QAHVLHSVDATKLHKL----------------PHSDVVPALFDYIIFNFPHSGQQRVHINRVLLLDFFESARPKLALR--GEVHITLKTKPPYSN-----WNVEEQARAHGFVLKERRPFRIQLFPGYHHRTTDPDAKKFEPDQCITYVFIVDRSRFP------VPS-------VLPPKTTNVAAPSTPRPSQLPST 256
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BLAST of Ec-00_001930.2 vs. uniprot
Match: A0A0L0FXM2_9EUKA (DUF2431 domain-containing protein n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXM2_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 1.140e-8
Identity = 55/157 (35.03%), Postives = 71/157 (45.22%), Query Frame = 2 
Query:  452 SRRSPVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTRDW*SARRPGE-RCTLPSRT-----SLRTRAGM*GN---GEGKRADHGEVPCLRPIGVSRLPPQHNRPSAKKFDAGGARTNVFC 895
            S+   VAH VDAT L++TL                  + ++  FD VVFNFPHTG QR HLNR L+ DFF S +     +  GE RCTL ++       +R +A + GN      KR D       R +           P AKKFDA       +C
Sbjct:  137 SKGGAVAHGVDATELKQTL----------------PKKLSQKKFDCVVFNFPHTGKQRVHLNRKLLLDFFISAKQM--VQPGGEIRCTLKNKPPYSGWEIRKQADVAGNLGPAVEKRFDFSLFKGYRHMTTE--------PDAKKFDAFEKHCVTYC 267
[Close]
BLAST of Ec-00_001930.2 vs. uniprot
Match: F0W3R3_9STRA (Uncharacterized protein AlNc14C14G1639 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3R3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.420e-8
Identity = 36/69 (52.17%), Postives = 41/69 (59.42%), Query Frame = 2 
Query:  467 VAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTR 673
            V H VDAT+L++TL               V G     LFD V+FNFPHTG QR HLNRNL+RDFF S R
Sbjct:   90 VLHRVDATQLDQTLW-------------RVNG--LTKLFDYVIFNFPHTGQQRVHLNRNLLRDFFQSAR 143
[Close]
BLAST of Ec-00_001930.2 vs. uniprot
Match: A0A7S1X7L4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X7L4_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 2.590e-7
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 2 
Query:  458 RSPVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFAS 667
            R+ VAH VDAT+L+ TL                      + FD ++FNFPHTG Q+ HLNR L+R FFAS
Sbjct:   59 RAVVAHGVDATKLDATL----------------PATDAPLAFDAIIFNFPHTGTQKVHLNRQLLRGFFAS 112
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BLAST of Ec-00_001930.2 vs. uniprot
Match: A0A024G6X6_9STRA (DUF2431 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6X6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.990e-7
Identity = 36/74 (48.65%), Postives = 42/74 (56.76%), Query Frame = 2 
Query:  452 SRRSPVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTR 673
            S  + V H VDATRL++TL         DG             FD ++FNFPHTG QR HLNRNL+RDFF S R
Sbjct:  337 SHGAKVFHGVDATRLDQTLPRI------DG---------LPHCFDYIIFNFPHTGQQRVHLNRNLVRDFFHSAR 395
[Close]
BLAST of Ec-00_001930.2 vs. uniprot
Match: A0A1V9ZN60_9STRA (DUF2431 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN60_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.510e-6
Identity = 51/155 (32.90%), Postives = 70/155 (45.16%), Query Frame = 2 
Query:  458 RSPVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTRDW*SARRPGE-RCTLPSRTSLRTRAGM*GNGEGKRADHGEVPCLRPIGVSRLPPQHNR----PSAKKFDAGGARTNVFCRARS 907
            ++ V H +DAT+L++                 V  +    LFD ++FNFPH+G QR H+NR L+ DFF S R     R  GE   +L ++           N E +    G V   R    S+L P +N     P AKKF+A    T VF   RS
Sbjct:   92 KAHVLHDIDATKLDQL----------------VHNDAVPALFDYIIFNFPHSGEQRVHINRVLLLDFFGSARSKLKFR--GEVHISLKNKPPYSN-----WNVEDQAKASGFVLKERRPFRSKLFPGYNHRTTDPDAKKFEADQCTTYVFIVDRS 223
[Close]
BLAST of Ec-00_001930.2 vs. uniprot
Match: A0A5D6XQB0_9STRA (DUF2431 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQB0_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.420e-6
Identity = 33/72 (45.83%), Postives = 39/72 (54.17%), Query Frame = 2 
Query:  458 RSPVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTR 673
            R  V H VDAT+L E        R  DG        +    F R+VFNFPH+G QR H+NR L+RDFF S R
Sbjct:   84 RGRVLHGVDATKLHELPA-----RLPDGA-------RVPAQFSRIVFNFPHSGQQRVHVNRALLRDFFESAR 143
The following BLAST results are available for this feature:
BLAST of Ec-00_001930.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LEE0_ECTSI1.310e-10462.65DUF2431 domain-containing protein n=2 Tax=Ectocarp... [more]
D8LED8_ECTSI1.520e-4045.83DUF2431 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CCP6_9STRA1.100e-949.30DUF2431 domain-containing protein (Fragment) n=1 T... [more]
A0A1V9ZF63_9STRA2.010e-931.02DUF2431 domain-containing protein n=1 Tax=Achlya h... [more]
A0A0L0FXM2_9EUKA1.140e-835.03DUF2431 domain-containing protein n=2 Tax=Sphaerof... [more]
F0W3R3_9STRA4.420e-852.17Uncharacterized protein AlNc14C14G1639 n=1 Tax=Alb... [more]
A0A7S1X7L4_9CHLO2.590e-744.29Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A024G6X6_9STRA2.990e-748.65DUF2431 domain-containing protein n=1 Tax=Albugo c... [more]
A0A1V9ZN60_9STRA1.510e-632.90DUF2431 domain-containing protein n=1 Tax=Thrausto... [more]
A0A5D6XQB0_9STRA3.420e-645.83DUF2431 domain-containing protein n=1 Tax=Pythium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2159213..2164547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2618
Hectar predicted targeting categorychloroplast
Gene idEc-00_001930.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001930Ec-00_001930Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2159211..2164552 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001930.2Ec-00_001930.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2160290..2160778 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001930.2.8Ec-00_001930.2.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2159213..2160902 -
Ec-00_001930.2.7Ec-00_001930.2.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2161328..2161399 -
Ec-00_001930.2.6Ec-00_001930.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2161742..2161838 -
Ec-00_001930.2.5Ec-00_001930.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2162086..2162169 -
Ec-00_001930.2.4Ec-00_001930.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2162764..2162969 -
Ec-00_001930.2.3Ec-00_001930.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2163338..2163440 -
Ec-00_001930.2.2Ec-00_001930.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2163680..2164015 -
Ec-00_001930.2.1Ec-00_001930.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2164518..2164547 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0019303UTR:Ec-00_001930.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 2159213..2160289 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001930.2CDS:Ec-00_001930.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2160290..2160778 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0019305UTR:Ec-00_001930.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 2160779..2160902 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001930.2 ID=Ec-00_001930.2|Name=Ec-00_001930.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=163bp
MTTVVKTTTLATTVTCSAGAAAGAGTPMAAWGLGTTKKEKAKKQPPRRGR
AMSPTAAAVLIRQPPMLTAGRTEGRRRKLVKKAVSAVFPVAARPRRLMRG
RGRYRMGHRNAACFSLRCRRRRPRSVEHSVSERPPLLKKQQPLQPRRQKG
RRQERVSHRATA*
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spliced messenger RNA

>Ec-00_001930.2 ID=Ec-00_001930.2|Name=Ec-00_001930.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2618bp|location=Sequence derived from alignment at chr_00:2159213..2164547- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGAGAGAGAGAGAGAGCGTGTCGCTCACTGGCAGCGAACAGCAAACCGAT
CGGCCTTCCTAAGACACATGGGGAAGTTCCGAGGGCACCAGGATAAGAGC
CGGAGGGGAAGGGAGAAGAAGCTCCTAAAGAAGAAAGCCGGGGCGGCTGC
TGGTGGAATCCGCGCGGTGGCGGCACAAGCTGAGTCGGCCGTTCCCGGCG
GCGACTCTCTGACCAGCAGCAGTCCTGGCCGTCTACAACAGCGGGGGGTA
GTAGGCGCGAAGAGGAAGCTCAAGCACGTGACGTACGCCAAGGAACACTC
GGTGCTTATCGTCGGAGACGGCGACTTCAGCTTCACGCGTGGCGTTATCC
GACACCGGGGAACGGGAGCTGGTGTCGTGGCGACGTCCCTGGACTCCGAG
AAAGCTGTACTCAAGAAGTACCCGCGAGCTGAGACTTGGCTCCCCAAACT
TGAAGCCGACGGAGCCCAGGTTGCACACTCTGTAGACGCTACCAGGCTCG
AGGAAACCCTCCTAGGGGCCGGTGAAGGCCGGGGAGATGACGGGGGTGGA
GGCGGAGTTGCTGGAGAGAAGACGCGAGTTTTGTTCGATCGCGTCGTCTT
CAACTTCCCCCACACCGGTGCCCAGAGGACACACCTCAACCGTAACCTCA
TCCGAGACTTCTTCGCCAGCACCAAGGGATTGGTGAAGTGCGCGGCGGCC
GGGGGAGAGGTGCACGTTACCCTCAAGGACAAGCCTCCGTACTCGGGCTG
GAATGTGAAGGCAATGGCGAGGGAAAGCGAGCTGATCATGGTGAGGTGCC
TTGCCTTCGACCCATCGGTGTTTCCCGGCTACCGCCACAGCACAACCGAC
CCTCAGGCAAAGAAATTCGACGCGGGAGGGGCCAGGACGAACGTGTTCTG
CCGGGCGAGATCCGAGCTTGACGACAACGTGGATGAGTCAGGCGCCTTCC
CGGTGATAGTGCGACGGGGGGGAGCAGCCTCCTCTGCGAACTCAGTTGAG
ACTGCCAACAACACCGGCGACAGCAACGATTCCGACGACAACGTCTACGG
TGATGACCACAGTAGTGAAGACGACAACGCTAGCGACAACAGTGACTTGT
TCGGCGGGGGCGGCTGCGGGAGCGGGGACCCCGATGGCGGCCTGGGGTCT
TGGGACGACGAAGAAAGAAAAGGCGAAAAAACAACCGCCTCGGCGGGGGC
GGGCGATGTCGCCCACGGCAGCGGCGGTGTTGATCAGGCAACCGCCGATG
CTAACGGCAGGAAGAACCGAGGGAAGAAGAAGAAAACTGGTGAAAAAGGC
GGTGTCGGCGGTGTTCCCAGTGGCAGCGAGGCCGAGGAGGTTAATGAGGG
GAAGGGGTCGGTATCGAATGGGGCATCGAAACGCGGCATGCTTCAGCCTC
CGGTGCAGAAGAAGAAGGCCGCGAAGCGTAGAGCACAGCGTAAGCGAAAG
GCCGCCGCTGCTAAAGAAGCAGCAGCCGCTACAGCCGCGGCGGCAGAAGG
GGCGCCGACAGGAGAGGGTTTCCCACAGGGCGACGGCGTGATGCCTGCCA
ACAAGGCAAAGTCTCCCAAGCGAAAGCGAGGGAAGTACGTCGTCAATTCG
GCGAAGAAGCGGCCGAGAGATTGATTAATTAATATGCGGCTCCGAGAGAC
GGCGATTTGTTTTTCGTTGACTACTGTGGCTCCTTGTAAGGTTATTTTGT
TTGGTGATTTGATTGAAACACACAAACCCTGCAAGCTGGGAAACAACAAC
AGTGCGAGCTGGGAAACGACTTGTTTCCGTACTTCGCGAGGGGGGGAAAC
ACTCGTCCTTTCTTGTTGCAGCCAAGAAATGAGTTTGACTTGAACATCGA
TCGTTACTATGTCAAGGCCCTACGCATGCATTGCCAATTGGCTGTTTATG
CTTCTCTTTTTTGAGAGTGACAGAGAGCCAGCGAGATGGCGGCATTTAGC
CAAGCAGTAGCAATACAAGCAGCGTCGTCGATGTTGTTGTCACTGATGCT
GTGGTAGCACTTCTCTTTCTCTCTCTCTCACTCCCTCTGCCGTTACGGGT
GCATCTATTTCCAGCTCTCTCTTCTGTAGCGCCGCCGGTTGATTCCCCGG
CTTGCCCCCCCCATGATTGTTCAAAAGAACGTCAGGCCTGTCTGTCCCAG
CCAGTTCTTATCGCGCTCACAGCAGTTGCGTGCAATCGCGCGCTGTGCGG
GCATGCGCCACGGCGAACCAACGCACGGGTGATGATCCATCGACTTGAAA
AGGTTACGTCTGCGATGAGACATGATGGGCGTGCTTAGTGTGAATGTTGT
GAAGGTGAAGTCTTGGTAGACAGGTTCAATAAGGAGGAGCTCAGAAACGT
GACGTAGGCAATTACCTCCTGAGAATTTCCTGTGTTCCTCGATGCACCAT
GTGCTCGGGCCGCGGCTTACTGCATGATCATGGTTATTATAAGTGACGTC
AAGAGCTAAAGATGGACGTACAACCCGGCCTTGCTAATGATCGTGGAGCT
ACAACAGTGTAAGCCGCGCAGGTCATGCAAGTAACACCCGGTGAAGAGGC
AGGAGCAGGGGGGGTGGGGCCGCAATCTCTCGGGATCATTGTTTCGAAGG
ATGATACATGCATTCTTT
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protein sequence of Ec-00_001930.2

>Ec-00_001930.2 ID=Ec-00_001930.2|Name=Ec-00_001930.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=163bp
MTTVVKTTTLATTVTCSAGAAAGAGTPMAAWGLGTTKKEKAKKQPPRRGR
AMSPTAAAVLIRQPPMLTAGRTEGRRRKLVKKAVSAVFPVAARPRRLMRG
RGRYRMGHRNAACFSLRCRRRRPRSVEHSVSERPPLLKKQQPLQPRRQKG
RRQERVSHRATA*
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mRNA from alignment at chr_00:2159213..2164547-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001930.2 ID=Ec-00_001930.2|Name=Ec-00_001930.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5335bp|location=Sequence derived from alignment at chr_00:2159213..2164547- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGAGAGAGAGAGAGAGCGTGTCGCTCACTGGTGAGTGTCTTGTGTACCTT
GTTGAGCAAAACGATGATCCACTTCGCTCGTCGTTTGATGAGGTCGTTGG
TGGCTCCGCAAGCGGGACTGTTAGCTTTTCGTGGCAGCAAGAGCAGCAAG
AGAGCAAGTCCCCCGGTTCCCATGTTTCGTCTCGTCGCGCTAGGGTTGGT
AGTTGCGGAAGGCTACCGGGTTACACCACATGCAAGATGACGTGGCTGTA
CTCATAGAACAGCACTGGGCAACAAGCGCCTGGCCCTCGTCCCCATTATG
CCCACACGGAGGCAGCAGTGCACTGCTCACGACTTGCAAGGGTCCATTAG
ACCATCCTCACGCAGTGGCGAACAGGCGGCAACAACTGCAGCACAATCAG
CACATCTGTTGATGGCAGCCCTTGATTGTGGTTTTGACCTCCTTGAGAAA
TAAAGCAGACCGGATTTCCCACAGTCGTTTTTCATTGGCCTCAATTTTGA
AAAGCTTGAGGAATACCTTGCGCCCCCGGCAGGCAGCGAACAGCAAACCG
ATCGGCCTTCCTAAGACACATGGGGAAGTTCCGAGGGCACCAGGATAAGA
GCCGGAGGGGAAGGGAGAAGAAGCTCCTAAAGAAGAAAGCCGGGGCGGCT
GCTGGTGGAATCCGCGCGGTGGCGGCACAAGCTGAGTCGGCCGTTCCCGG
CGGCGACTCTCTGACCAGCAGCAGTCCTGGCCGTCTACAACAGCGGGGGG
TAGTAGGCGCGAAGAGGAAGCTCAAGCACGTGACGTACGCCAAGGAACAC
TCGGTGCTTATCGTCGGAGACGGCGACTTCAGCTTCACGCGTGGCGTTAT
CCGACACCGGGGAACGGGGTAAGTCTAACCGAGCGCTCGCCACTTCAATA
TTAAACGTTTCCTTAATTAAACGTCTCTTGGAGCACTTGCCGTCTTGCCG
AACAAAACGCAGTACGTCCGTGTCCAAGAACCAAGGTCTCTTTCACCCAC
GAAACGACCTGATCTGATGAAGCTAGGTTTGTGACTCCCCTCTTGCTTGA
CGGAACTCCAAACTCTTTGTTCAACTAGTTTGCAACCATTTCCGTTCATT
GGTGCAGAGCTGGTGTCGTGGCGACGTCCCTGGACTCCGAGAAAGCTGTA
CTCAAGAAGTACCCGCGAGCTGAGACTTGGCTCCCCAAACTTGAAGCCGA
CGGAGCCCAGGTAAACAAACCACCTGAGACGGGCTATGCTTTCTGGTACG
GGAAACGTCGAGGACGTGCGGTCAGCCGAATGTCTGTAGATGCATCCTTG
ATTGTCGTTTGCGTCGACTCTGCTCTGGTGTACTGCTGCGGTGGTGAACG
CGACGCAGGCGAAGTCCAGATGAGGGGAAGACTCCGTCAGGCCTAGTTAA
ACCGCAAATATGACCGCACCATAGATGGTCGGGGGGATATTTTCGTTTTT
TGGGGGACTGCCGACACTCACACCCAACACTTTCTGGGCGTCTGATACGG
CAGTCTTGGTCTATTCATCCAACATCTTGACCGGGTCTTGTCTACCGTTA
CCCTTCCGTGATGAATATATTGTACCAGGTTGCACACTCTGTAGACGCTA
CCAGGCTCGAGGAAACCCTCCTAGGGGCCGGTGAAGGCCGGGGAGATGAC
GGGGGTGGAGGCGGAGTTGCTGGAGAGAAGACGCGAGTTTTGTTCGATCG
CGTCGTCTTCAACTTCCCCCACACCGGTGCCCAGAGGACACACCTCAACC
GTAACCTCATCCGAGACTTCTTCGCCAGCACCAAGTGAGTCGTCGCAGCG
GAATCGAAAAGCCTCCGCTATCAACCACCCAGCGTTTTTATCGATGTTGG
CCTTAAGCGTATATCGATGTTAGTGTTGGCAGTAAATCGTTGTTGGTCTT
CGGGGAATAGAGGCCGACCTAGCCTGCTTGCCTGAAAAAGTGCCCCGCCT
GCCGTCGTTTGGCCACGGTGGGAAAACAAAGCTTGGATATGATGGGCCGT
GGTTTTTGGTTTCCCGCGAGGTGGATCACACGGCTCACGCGGTATTTCGA
GGGGGACGGGGTAGAAAGGATTCATCGTTCATGTCTAACTCAGTTCGTAA
GAATGCAGCGAGGGAGACCAGTAGGATTCCGCGCTAGACATAAGCAGGTG
GAGCCGAGGGAGGTTACATGTGGGGGGTGCGATGCGCTGTTTCGTTTTCT
TCTGACATGTCTTGGTCTCCGAACATCTGTGCCAAACGAGCAACGTGCGC
AATACAGCGACAACCGACCACGCTCTTGTTTCTTGGCGGGCAGTTCATGT
GCATGCCCTGTCCTCTTCCGACGGAATCGTGTGAAACTCAGCCTGAGCCC
CTCCCCTCTCTCCTTCCGATTGTGAAAGGGGATTGGTGAAGTGCGCGGCG
GCCGGGGGAGAGGTGCACGTTACCCTCAAGGACAAGCCTCCGTACTCGGG
CTGGAATGTGAAGTAAGCCATCCGTTCGTTATGTTGCTTTTTTCCTGGCT
TTGCTCTTGTGCTTTCTTCCTACGGTCCTGACAATCGTAGCCATTCGTGT
TGAAATGTTCTTATTTTGCTTGTTGATGTGGTTCTGTGACTTTCTCGGTG
CTATGGACTTGCTCTTGTTCTTCAGTTTATTTCGTTGGACCACCAATCAT
ACCTCGCAGCTGGTATCCTTGTTATCCTCACGCGAAACGATCCGCTTCTG
TGTCCGCAGGGCAATGGCGAGGGAAAGCGAGCTGATCATGGTGAGGTGCC
TTGCCTTCGACCCATCGGTGTTTCCCGGCTACCGCCACAGCACAACCGAC
CCTCAGGTAAACAAAACCACTGAATTGTATTCTAGCTCACTCGTGCTTGA
CTGACTGCTTGTCAAGAAGCGCATGGAGCAGCAGAGGAAGTTCTAGCCCC
AGGCTAAACGACACGGAGGAATTTCCAGCCTCCGGCTAAATGAAGCCACT
GAGTTTGCGGTGGTTACCATGGGCTGCGGTGGATGTTTGGCCGATGAAAA
CGTTAAGGAAGTTGTCAAGTCGGAGTGAATATTACAGAAGTTGGGAAGCC
CAAGTGGATACCTCCCGTCGTCCACCGCTATATTTCTATCTCAGTCAACC
CTTTTTGTGTTTTGTTTGTGTCCCTGTGCCCCTGTTTCTTTTCCACAGGC
AAAGAAATTCGACGCGGGAGGGGCCAGGACGAACGTGTTCTGCCGGGCGA
GATCCGAGCTTGACGACAACGTGAGCATCGTCCGTTGAATTCCATTCATG
TTTTCCATGTGCATGTCTACGCCCTCCCCAAAAGCCAAGAATATTTTCAT
GTCATGAACTGGAAGGAACACCGCCATTGTTTTATCCCGCTACCATGCTT
GCTGATTCACAAATACGCATATTTTTGCAGCCTTTGTTTCACCCTTCCGC
ATGAACTGCTAATCGGTCAGACCGGAAGGGTAGGTGATGATGTGCCTCAC
GCGTGCATTCCGGCGGTGCGCGGATGCTGAATGGGCTGCTTGCGCTGTGA
TCCTTGCCGTGTGCTTGTGAAACCAACCCGGGAAACGAAGCTCTTGCTGC
TGCGATTGGTCACAATATCAGCTCGAGACGCGTCGGTTCGCGATGCCTGA
TGGCTCTATTTACAATGTTGCGCATGGATTGACTGCTGTAACCAGGTGGA
TGAGTCAGGCGCCTTCCCGGTGATAGTGCGACGGGGGGGAGCAGCCTCCT
CTGCGAACTCAGTTGAGACTGCCAACAACACCGGCGACAGCAACGATTCC
GACGACAACGTCTACGGTGATGACCACAGTAGTGAAGACGACAACGCTAG
CGACAACAGTGACTTGTTCGGCGGGGGCGGCTGCGGGAGCGGGGACCCCG
ATGGCGGCCTGGGGTCTTGGGACGACGAAGAAAGAAAAGGCGAAAAAACA
ACCGCCTCGGCGGGGGCGGGCGATGTCGCCCACGGCAGCGGCGGTGTTGA
TCAGGCAACCGCCGATGCTAACGGCAGGAAGAACCGAGGGAAGAAGAAGA
AAACTGGTGAAAAAGGCGGTGTCGGCGGTGTTCCCAGTGGCAGCGAGGCC
GAGGAGGTTAATGAGGGGAAGGGGTCGGTATCGAATGGGGCATCGAAACG
CGGCATGCTTCAGCCTCCGGTGCAGAAGAAGAAGGCCGCGAAGCGTAGAG
CACAGCGTAAGCGAAAGGCCGCCGCTGCTAAAGAAGCAGCAGCCGCTACA
GCCGCGGCGGCAGAAGGGGCGCCGACAGGAGAGGGTTTCCCACAGGGCGA
CGGCGTGATGCCTGCCAACAAGGCAAAGTCTCCCAAGCGAAAGCGAGGGA
AGTACGTCGTCAATTCGGCGAAGAAGCGGCCGAGAGATTGATTAATTAAT
ATGCGGCTCCGAGAGACGGCGATTTGTTTTTCGTTGACTACTGTGGCTCC
TTGTAAGGTTATTTTGTTTGGTGATTTGATTGAAACACACAAACCCTGCA
AGCTGGGAAACAACAACAGTGCGAGCTGGGAAACGACTTGTTTCCGTACT
TCGCGAGGGGGGGAAACACTCGTCCTTTCTTGTTGCAGCCAAGAAATGAG
TTTGACTTGAACATCGATCGTTACTATGTCAAGGCCCTACGCATGCATTG
CCAATTGGCTGTTTATGCTTCTCTTTTTTGAGAGTGACAGAGAGCCAGCG
AGATGGCGGCATTTAGCCAAGCAGTAGCAATACAAGCAGCGTCGTCGATG
TTGTTGTCACTGATGCTGTGGTAGCACTTCTCTTTCTCTCTCTCTCACTC
CCTCTGCCGTTACGGGTGCATCTATTTCCAGCTCTCTCTTCTGTAGCGCC
GCCGGTTGATTCCCCGGCTTGCCCCCCCCATGATTGTTCAAAAGAACGTC
AGGCCTGTCTGTCCCAGCCAGTTCTTATCGCGCTCACAGCAGTTGCGTGC
AATCGCGCGCTGTGCGGGCATGCGCCACGGCGAACCAACGCACGGGTGAT
GATCCATCGACTTGAAAAGGTTACGTCTGCGATGAGACATGATGGGCGTG
CTTAGTGTGAATGTTGTGAAGGTGAAGTCTTGGTAGACAGGTTCAATAAG
GAGGAGCTCAGAAACGTGACGTAGGCAATTACCTCCTGAGAATTTCCTGT
GTTCCTCGATGCACCATGTGCTCGGGCCGCGGCTTACTGCATGATCATGG
TTATTATAAGTGACGTCAAGAGCTAAAGATGGACGTACAACCCGGCCTTG
CTAATGATCGTGGAGCTACAACAGTGTAAGCCGCGCAGGTCATGCAAGTA
ACACCCGGTGAAGAGGCAGGAGCAGGGGGGGTGGGGCCGCAATCTCTCGG
GATCATTGTTTCGAAGGATGATACATGCATTCTTT
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Coding sequence (CDS) from alignment at chr_00:2159213..2164547-

>Ec-00_001930.2 ID=Ec-00_001930.2|Name=Ec-00_001930.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=489bp|location=Sequence derived from alignment at chr_00:2159213..2164547- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACCACAGTAGTGAAGACGACAACGCTAGCGACAACAGTGACTTGTTC
GGCGGGGGCGGCTGCGGGAGCGGGGACCCCGATGGCGGCCTGGGGTCTTG
GGACGACGAAGAAAGAAAAGGCGAAAAAACAACCGCCTCGGCGGGGGCGG
GCGATGTCGCCCACGGCAGCGGCGGTGTTGATCAGGCAACCGCCGATGCT
AACGGCAGGAAGAACCGAGGGAAGAAGAAGAAAACTGGTGAAAAAGGCGG
TGTCGGCGGTGTTCCCAGTGGCAGCGAGGCCGAGGAGGTTAATGAGGGGA
AGGGGTCGGTATCGAATGGGGCATCGAAACGCGGCATGCTTCAGCCTCCG
GTGCAGAAGAAGAAGGCCGCGAAGCGTAGAGCACAGCGTAAGCGAAAGGC
CGCCGCTGCTAAAGAAGCAGCAGCCGCTACAGCCGCGGCGGCAGAAGGGG
CGCCGACAGGAGAGGGTTTCCCACAGGGCGACGGCGTGA
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Synonyms
The feature 'Ec-00_001930.2' has the following synonyms
Synonym
Esi0013_0186
Esi_0013_0186