Ec-00_001910.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001910.1
Unique NameEc-00_001910.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length302
Homology
BLAST of Ec-00_001910.1 vs. uniprot
Match: D8LED8_ECTSI (DUF2431 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED8_ECTSI)

HSP 1 Score: 624 bits (1609), Expect = 2.840e-226
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1
Query:    1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHAAAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNCCVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDNASTVEIHSYFPYASNHSFSPKTKNEIK 903
            MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHAAAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNCCVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDNASTVEIHSYFPYASNHSFSPKTKNEIK
Sbjct:    1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHAAAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNCCVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDNASTVEIHSYFPYASNHSFSPKTKNEIK 301          
BLAST of Ec-00_001910.1 vs. uniprot
Match: D8LEE0_ECTSI (DUF2431 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE0_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 1.440e-112
Identity = 198/318 (62.26%), Postives = 220/318 (69.18%), Query Frame = 1
Query:    1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHA-AAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQAREN------------PSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGV---PGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDNASTVEIHSYFPYASNHSFSPKTKNEIK 903
            MGKFRGHQD+S RGRE K+LKKK G A GGI A AAQAES V GGDSL S +PG  QQ   R  VG KRKLKHVTYAKEHSVL+VGDG FSF    + HRGT AGVVATSLDS KAVLKKYP+AETWLPKLEADG Q   +               G     G  GV+GEK R+ F RVVFNFPHTGAQ THLNR+LI DFFASTKGLVKCAA GG VHVTLKDKPP+SGWN     + ++   V     DPSVFPGY +STTDPQA +F+A GAR TNV C ARSELDDN   V+    FP       +  + N ++
Sbjct:    1 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPGRLQQ---RGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGAR-TNVFCRARSELDDN---VDESGAFPVIVRRGGAASSANSVE 311          
BLAST of Ec-00_001910.1 vs. uniprot
Match: A0A836CCP6_9STRA (DUF2431 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP6_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.140e-33
Identity = 83/182 (45.60%), Postives = 107/182 (58.79%), Query Frame = 1
Query:  211 KHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGVP-----GDPSVFPGYLYSTT 738
            K V+YA   ++L+ GDG FSF    ++HR + AGVVATSLDS   VL KYP A  WL +L AD   A+        R E        + +  F RVVFNFPHTG Q  HLNR+L+ +FF S +G VKCA  GG VHVTLK+ PP++GW   ++   A  G +P      DP+ FPGY +  +
Sbjct:   76 KTVSYAANSTILVCGDGDFSFTRGLLKHRRSGAGVVATSLDSHDVVLSKYPDALEWLDRL-AD---AKVLHGVDATRLE-----QAVRPQQLFDRVVFNFPHTGEQRVHLNRNLLRNFFRSARGYVKCAPDGGEVHVTLKEGPPYNGWE--IKEAAAAAGMLPIRTLAFDPNQFPGYRHQVS 246          
BLAST of Ec-00_001910.1 vs. uniprot
Match: A0A225WPB9_9STRA (DUF2431 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPB9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.140e-27
Identity = 75/205 (36.59%), Postives = 108/205 (52.68%), Query Frame = 1
Query:  199 KRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKL---------EADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPGDPS-----VFPGYLYSTTDPQAMRFNAE 768
            K++     YA + +VL++GDG FSF+   V+HRGT  GV+ATS DS   V  KYP A+  +  +         + D  +  E P       + + G   +    +FH +VFNFPH+G Q  H+NR L+L+FF S +  +      G  HVTLK +PP+S W    + K A  G V  +       +FPGY + TTDPQA +F  +
Sbjct:   26 KQEASTQVYAADDTVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESKVRSKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQ------QVKTGAGLKPVPDFFHYIVFNFPHSGQQRVHINRALLLNFFESARDRLTAQ---GEAHVTLKTRPPYSNWFIEEQAKAA--GFVMKERRKFNIRLFPGYRHRTTDPQAKKFEPD 219          
BLAST of Ec-00_001910.1 vs. uniprot
Match: D0MYL5_PHYIT (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MYL5_PHYIT)

HSP 1 Score: 114 bits (285), Expect = 9.960e-27
Identity = 74/199 (37.19%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  223 YAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKL---------EADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGW--------NGNVEGKRADHGGVPGDPSVFPGYLYSTTDPQAMRFNA 765
            YA + +VL++GDG FSF+   V+HR T  GV+ATS DS   V +KYP A+  +  +         + D  +  E P +       + G   +    +F  +VFNFPH+G Q  H+NR L+L+FF S +  +    V G  HVTLK +PP+S W         G V  +R        D  +FPGY + TTDPQA +F A
Sbjct:   36 YAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKV------KTGTGLKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TVRGEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQF-----DIKLFPGYRHRTTDPQAKKFEA 220          
BLAST of Ec-00_001910.1 vs. uniprot
Match: M4BFN6_HYAAE (DUF2431 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFN6_HYAAE)

HSP 1 Score: 115 bits (289), Expect = 2.290e-26
Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 1
Query:  223 YAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEA---------DGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGV-----PGDPSVFPGYLYSTTDPQAMRFNAE 768
            YA + +VL+VGDG FSF+   V+HRGT  G++ATS DS   V  KY  A   +  +++         D  +  E P         + G   +     F  ++FNFPH+G Q  H+NR L+L+FF S +  +   +V G VHVTLK +PP+S W   VE +  + G V       D  +FPGY + TTDPQA +F+ +
Sbjct:   39 YAPKDTVLIVGDGDFSFSRGLVKHRGTGLGIIATSFDSDSQVCAKYSNAHECIAAVQSSLGLVLHDVDATKLLELPQHV------QTGTGSKTISDVFQYIIFNFPHSGQQRVHINRALLLNFFESARDRL---SVHGEVHVTLKTQPPYSNWF--VEDRAKEAGFVLKERRKFDSRLFPGYRHRTTDPQAKKFDLD 224          
BLAST of Ec-00_001910.1 vs. uniprot
Match: A0A833SYA2_PHYIN (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SYA2_PHYIN)

HSP 1 Score: 114 bits (285), Expect = 8.540e-26
Identity = 74/199 (37.19%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  223 YAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKL---------EADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGW--------NGNVEGKRADHGGVPGDPSVFPGYLYSTTDPQAMRFNA 765
            YA + +VL++GDG FSF+   V+HR T  GV+ATS DS   V +KYP A+  +  +         + D  +  E P +       + G   +    +F  +VFNFPH+G Q  H+NR L+L+FF S +  +    V G  HVTLK +PP+S W         G V  +R        D  +FPGY + TTDPQA +F A
Sbjct:   36 YAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKV------KTGTGLKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TVRGEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQF-----DIKLFPGYRHRTTDPQAKKFEA 220          
BLAST of Ec-00_001910.1 vs. uniprot
Match: A0A0L0FXM2_9EUKA (DUF2431 domain-containing protein n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXM2_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 5.850e-25
Identity = 75/192 (39.06%), Postives = 105/192 (54.69%), Query Frame = 1
Query:  220 TYAKEHSVLLVGDGCFSFNC-CVEH-RGTRAGVVATSLDSLKAVLKKYPQAET-WLPKLEADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPG-------DPSVFPGYLYSTTDPQAMRFNA 765
            TY     +L+VGDG F F+   V H +G  + +VATS D  K + +KY +  T  +  +E+ G       + G    E +  +  + ++  F  VVFNFPHTG Q  HLNR L+LDFF S K +V+    GG +  TLK+KPP+SGW      K+AD  G  G       D S+F GY + TT+P A +F+A
Sbjct:   77 TYGANQKILVVGDGDFGFSAGLVSHCKGKGSNIVATSYDKAKELTEKYGERATRHIQAIESKGGAV----AHGVDATELKQTLPKKLSQKKFDCVVFNFPHTGKQRVHLNRKLLLDFFISAKQMVQ---PGGEIRCTLKNKPPYSGWEIR---KQADVAGNLGPAVEKRFDFSLFKGYRHMTTEPDAKKFDA 258          
BLAST of Ec-00_001910.1 vs. uniprot
Match: A0A1V9ZN60_9STRA (DUF2431 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN60_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.290e-25
Identity = 71/188 (37.77%), Postives = 102/188 (54.26%), Query Frame = 1
Query:  223 YAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGV-----PGDPSVFPGYLYSTTDPQAMRFNAE 768
            Y  +  +L++GDG F+F+   VEHRG+   ++ATS DS  AV  KY  A T +  +     QA+ +        +    V  +     F  ++FNFPH+G Q  H+NR L+LDFF S +  +K     G VH++LK+KPP+S WN  VE +    G V     P    +FPGY + TTDP A +F A+
Sbjct:   33 YTAKDVILVLGDGDFTFSKGLVEHRGSGINLIATSFDSSTAVRDKYKNAYTCINAIR----QAKAHVLHDIDATKLDQLVHNDAVPALFDYIIFNFPHSGEQRVHINRVLLLDFFGSARSKLKFR---GEVHISLKNKPPYSNWN--VEDQAKASGFVLKERRPFRSKLFPGYNHRTTDPDAKKFEAD 211          
BLAST of Ec-00_001910.1 vs. uniprot
Match: F2U7G5_SALR5 (DUF2431 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7G5_SALR5)

HSP 1 Score: 114 bits (284), Expect = 7.060e-25
Identity = 75/194 (38.66%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  202 RKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAG-VVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRAD---HGGVPGDPSVFPGYLYSTTDPQAMRFNAE 768
            R    V Y   H +L+VGDG FSF+   VEH G  A  +VATS DSL+ V KKY  ++  +  ++  G Q   +   G             K R +FHRVVFNFPHTG Q  HLN++L+  F  S+  ++      G VH+T+K   P+SGW+    GK A     G +  +  +FPGY + TT  +A  F+AE
Sbjct:  169 RATADVKYKSTHRILVVGDGDFSFSAGLVEHVGGHADRLVATSYDSLEEVEKKYKASKRNIGAIKRGGAQVVHDIDAGNLHNHF------PKQREYFHRVVFNFPHTGEQRVHLNKELVRRFLFSSPFVLH---PNGQVHITIKMSLPYSGWDIPALGKEAGLVLAGMLDFNAQLFPGYRHKTTLAEAKEFDAE 353          
The following BLAST results are available for this feature:
BLAST of Ec-00_001910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LED8_ECTSI2.840e-226100.00DUF2431 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LEE0_ECTSI1.440e-11262.26DUF2431 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CCP6_9STRA1.140e-3345.60DUF2431 domain-containing protein (Fragment) n=1 T... [more]
A0A225WPB9_9STRA2.140e-2736.59DUF2431 domain-containing protein n=1 Tax=Phytopht... [more]
D0MYL5_PHYIT9.960e-2737.19DUF2431 domain-containing protein n=1 Tax=Phytopht... [more]
M4BFN6_HYAAE2.290e-2637.56DUF2431 domain-containing protein n=1 Tax=Hyaloper... [more]
A0A833SYA2_PHYIN8.540e-2637.19DUF2431 domain-containing protein n=1 Tax=Phytopht... [more]
A0A0L0FXM2_9EUKA5.850e-2539.06DUF2431 domain-containing protein n=2 Tax=Sphaerof... [more]
A0A1V9ZN60_9STRA6.290e-2537.77DUF2431 domain-containing protein n=1 Tax=Thrausto... [more]
F2U7G5_SALR57.060e-2538.66DUF2431 domain-containing protein n=1 Tax=Salpingo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2147640..2150438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score627.5
Seed ortholog evalue3.3e-177
Seed eggNOG ortholog2880.D8LED8
Length906
KEGG koko:K10696,ko:K19307
Hectar predicted targeting categoryother localisation
Gene idEc-00_001910.1
EggNOG free text desc.rRNA (uridine-N3-)-methyltransferase activity
EggNOG OGsKOG4174@1,KOG4174@2759
EC2.1.1.313,2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001910Ec-00_001910Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2147640..2150438 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001910.1Ec-00_001910.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2147640..2150438 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001910.1.6Ec-00_001910.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2147640..2147798 -
Ec-00_001910.1.5Ec-00_001910.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2148142..2148234 -
Ec-00_001910.1.4Ec-00_001910.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2148521..2148599 -
Ec-00_001910.1.3Ec-00_001910.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2149227..2149396 -
Ec-00_001910.1.2Ec-00_001910.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2149785..2149887 -
Ec-00_001910.1.1Ec-00_001910.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2150137..2150438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001910.1CDS:Ec-00_001910.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2147640..2147798 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001910.1 ID=Ec-00_001910.1|Name=Ec-00_001910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=302bp
MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHAAAQAESTVSGGDSLGSG
NPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNCCVEHRGT
RAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGR
CGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAV
GGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPGDPSVFPGYLYSTTDPQA
MRFNAEGARRTNVLCPARSELDDNASTVEIHSYFPYASNHSFSPKTKNEI
K*
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spliced messenger RNA

>Ec-00_001910.1 ID=Ec-00_001910.1|Name=Ec-00_001910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=906bp|location=Sequence derived from alignment at chr_00:2147640..2150438- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGAAGTTTCGAGGGCATCAGGATAGGAGCTGGAGGGGAAGAGAGAA
TAAAATCCTCAAGAAGAAAGTCGGGGTGGCTGTTGGGGGAATCCACGCGG
CGGCACAAGCTGAATCGACCGTTTCCGGCGGCGACTCTCTGGGCAGCGGC
AATCCTGGGCACCAACAACAACAGCAACAGCGGGAGGCAGTAGGCCCGAA
ACGGAAGCTCAAGCACGTGACGTACGCCAAGGAACACTCGGTGCTTCTCG
TCGGAGACGGTTGCTTCAGTTTCAACTGTTGTGTTGAACACCGGGGAACG
CGAGCTGGAGTCGTAGCGACGTCCCTGGACTCCCTAAAAGCTGTACTCAA
AAAGTACCCGCAAGCCGAGACTTGGCTCCCCAAGCTTGAAGCCGACGGAC
CCCAGGCTCGAGAAAACCCTTCTAGGGGCGGGTGGAGGCCAGAGGGACGG
TGCGGAGTTTCTGGAGAAAAGAATCGAATTTGGTTCCACCGCGTCGTTTT
CAACTTCCCCCACACCGGCGCCCAGAGCACACACCTGAACCGTGACCTCA
TCCTAGACTTCTTCGCCAGCACCAAGGGATTGGTCAAGTGCGCGGCGGTC
GGGGGACACGTGCACGTTACCCTCAAGGACAAGCCTCCGTTCTCGGGCTG
GAACGGCAATGTCGAGGGAAAGCGAGCTGATCATGGTGGGGTGCCTGGCG
ACCCATCGGTGTTTCCCGGCTACCTCTACAGCACAACTGACCCTCAGGCA
ATGAGGTTCAACGCTGAAGGGGCCAGGCGAACGAACGTGTTGTGCCCGGC
GAGATCCGAGCTTGACGACAATGCGAGCACCGTTGAAATTCATTCATATT
TTCCGTATGCATCAAATCATTCGTTCTCCCCAAAAACCAAGAACGAAATT
AAATGA
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protein sequence of Ec-00_001910.1

>Ec-00_001910.1 ID=Ec-00_001910.1|Name=Ec-00_001910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=302bp
MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHAAAQAESTVSGGDSLGSG
NPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNCCVEHRGT
RAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRPEGR
CGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAV
GGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPGDPSVFPGYLYSTTDPQA
MRFNAEGARRTNVLCPARSELDDNASTVEIHSYFPYASNHSFSPKTKNEI
K*
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mRNA from alignment at chr_00:2147640..2150438-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001910.1 ID=Ec-00_001910.1|Name=Ec-00_001910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2799bp|location=Sequence derived from alignment at chr_00:2147640..2150438- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGGAAGTTTCGAGGGCATCAGGATAGGAGCTGGAGGGGAAGAGAGAA TAAAATCCTCAAGAAGAAAGTCGGGGTGGCTGTTGGGGGAATCCACGCGG CGGCACAAGCTGAATCGACCGTTTCCGGCGGCGACTCTCTGGGCAGCGGC AATCCTGGGCACCAACAACAACAGCAACAGCGGGAGGCAGTAGGCCCGAA ACGGAAGCTCAAGCACGTGACGTACGCCAAGGAACACTCGGTGCTTCTCG TCGGAGACGGTTGCTTCAGTTTCAACTGTTGTGTTGAACACCGGGGAACG CGGTGAGTCTAACCATGCTTCAGTAAGACGCACACCTCTTGGAACACTTG CCAACAATGGGTACTCCCATGTGCGTCGCACTAATATTGCGCAGCCGTGA ACAACTAAGGTCTCTTTGGCCCACGAAACGATCTCACCTGACGCAGTCCG GTCACCGTTATTTGTGACGCTCTTGCTGTTCCTTGACGAAACTCAAAACT TCTTGTGTAACTCCTTTGAACCTTTGAAACCGTTTTCGTTCATTGGTGCA GAGCTGGAGTCGTAGCGACGTCCCTGGACTCCCTAAAAGCTGTACTCAAA AAGTACCCGCAAGCCGAGACTTGGCTCCCCAAGCTTGAAGCCGACGGACC CCAGGTTAAGCAAACAGCCTTAGGCGGACATATATATGGCGAGACTGTTT ATAGGACAGCAGACATCTAAGGCTTGCAGCCGGCCGTATGTCTGTATGTG CCTCCTTGATTGTCGTTTTCGTCGACTGCCCTGGTGCTGCGGTGGTGAAC GAGGTGCAAGAGAAAACTAGACGAGGGGAATACTCCGTCAGGCCTACCCA CACCGCAAACATGGTAGGTAGCAAGGGGGTATTTTTGTTTGAGGGACTGT CGACAATGGCAACATAATCTGAACGTCTGATGCATTTTGTTCTACAAAGG ATCATTTTCCTACATCCGGCCGGGTCTTGTCCACCGTTACCCTTCCGTGG TGATTTTTTGTGCCAGGTTGCACGCGCCGTTGACGCCAACAGGCTCGAGA AAACCCTTCTAGGGGCGGGTGGAGGCCAGAGGGACGGTGCGGAGTTTCTG GAGAAAAGAATCGAATTTGGTTCCACCGCGTCGTTTTCAACTTCCCCCAC ACCGGCGCCCAGAGCACACACCTGAACCGTGACCTCATCCTAGACTTCTT CGCCAGCACCAAGTGAGTCGTCGCAACGGCACCAAAAAGCCTTCGCAATC AACCACTTAGCGTTTTTATCGATGCTGGACGTAGCAGAAAGTCGATATTG GTCTTTGCAAAAGTAAGTCGATGCTAGTCTTGGCAGTAAATCGATGTTGG TCTTAGGAGCATAGAGGTCGGCCTCGGCTGCTTGTCGGAAAAAGTGCACG CCATGCCGTCGTTTGGCCACGATGGGAAAACAAGGCTCATATTTTTCCTG CGAGATGGCTCACACGGCGGCTCATGCGGAACTCGCCCGGGGACGGAGTA GAAAGGAGTTTTCATCCACCATTGTCCAAATCATTTCGTAAGGGTACAGC GAGGGAGAGGAGTAGGATTTCACGCGAGACCGGCGCAAGTGGGGCCGAGA GAGGGTGGGGAGGGGGCAACGTGCTGCAGTTTTTTCTTCGTTTTGGCCGT GACGTGTCTTTGTCTCCAAGAATCTCCGTACCAAACGAGCACGCGCGCAG TACCGATAACAGTCCACTCCCTTGTTTCTTGGCAGGCAGTTCGTGCGCGT TCAACCCCCATTTCCCCCCCGAAAGAATCGCGTGAAGCTCTGCCGCCGCT GATTGTCTCTGTCCCCTCTTTCCTTCCGATTGTCAAAAGGGGATTGGTCA AGTGCGCGGCGGTCGGGGGACACGTGCACGTTACCCTCAAGGACAAGCCT CCGTTCTCGGGCTGGAACGTGAAGTATGCCATCCGTTGGTTCTGTTGCTT ATTCGCCTTGCTCTGTACTTGCTTGCTACGGCCCTGGAACTATGATGTTG AAGTGTTCTGAATGTTTTCGTTGATGATGTAGTTGTGTGGAGCTTTCTTG GTGTTGGACTCGAATTTGTATTGTTGTGGATTCGGTTGATATTTGATGTT TTAGAATAGTTTAGACAACGGAAAACGTATTTCAACGAAAAATATTACAC AGCTGGGGTATCCTTATTATCTTCACACGAATCGACCCGCTCCTGTGTAC ACAGGGCAATGTCGAGGGAAAGCGAGCTGATCATGGTGGGGTGCCTGGCG ACCCATCGGTGTTTCCCGGCTACCTCTACAGCACAACTGACCCTCAGGTA CAATAAATCACTCGAAGCTCACTCGTTCTGGACTGAATATTCGTCAATTG CGCATTAAACACCGACGAGATTTCGAGCCCGATGCTAACCGAAGCGGAAG ATTTTCTAGCCTCAGGCAAAATGAAGTCACTGAGTTTGCAGCGGTTACCA CAAGGTACGCGGTGGATGTTATGTCAACGTTGAGGAAGTTGTGAAGACGG GGTGAATATCAAGGACGTCGTGAAGCCAGAGTGAATGCAACCCGCCCCCC ACCGCCGTGCATGGAAAAACACTTTCGGTTACACCCCGCCCCCCCCCCTG TTTTGGTGTCGTCCCCGACGCCCCCCTTCCTTATCCGCAGGCAATGAGGT TCAACGCTGAAGGGGCCAGGCGAACGAACGTGTTGTGCCCGGCGAGATCC GAGCTTGACGACAATGCGAGCACCGTTGAAATTCATTCATATTTTCCGTA TGCATCAAATCATTCGTTCTCCCCAAAAACCAAGAACGAAATTAAATGA
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Coding sequence (CDS) from alignment at chr_00:2147640..2150438-

>Ec-00_001910.1 ID=Ec-00_001910.1|Name=Ec-00_001910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=906bp|location=Sequence derived from alignment at chr_00:2147640..2150438- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGGAAGTTTCGAGGGCATCAGGATAGGAGCTGGAGGGGAAGAGAGAA
TAAAATCCTCAAGAAGAAAGTCGGGGTGGCTGTTGGGGGAATCCACGCGG
CGGCACAAGCTGAATCGACCGTTTCCGGCGGCGACTCTCTGGGCAGCGGC
AATCCTGGGCACCAACAACAACAGCAACAGCGGGAGGCAGTAGGCCCGAA
ACGGAAGCTCAAGCACGTGACGTACGCCAAGGAACACTCGGTGCTTCTCG
TCGGAGACGGTTGCTTCAGTTTCAACTGTTGTGTTGAACACCGGGGAACG
CGAGCTGGAGTCGTAGCGACGTCCCTGGACTCCCTAAAAGCTGTACTCAA
AAAGTACCCGCAAGCCGAGACTTGGCTCCCCAAGCTTGAAGCCGACGGAC
CCCAGGCTCGAGAAAACCCTTCTAGGGGCGGGTGGAGGCCAGAGGGACGG
TGCGGAGTTTCTGGAGAAAAGAATCGAATTTGGTTCCACCGCGTCGTTTT
CAACTTCCCCCACACCGGCGCCCAGAGCACACACCTGAACCGTGACCTCA
TCCTAGACTTCTTCGCCAGCACCAAGGGATTGGTCAAGTGCGCGGCGGTC
GGGGGACACGTGCACGTTACCCTCAAGGACAAGCCTCCGTTCTCGGGCTG
GAACGGCAATGTCGAGGGAAAGCGAGCTGATCATGGTGGGGTGCCTGGCG
ACCCATCGGTGTTTCCCGGCTACCTCTACAGCACAACTGACCCTCAGGCA
ATGAGGTTCAACGCTGAAGGGGCCAGGCGAACGAACGTGTTGTGCCCGGC
GAGATCCGAGCTTGACGACAATGCGAGCACCGTTGAAATTCATTCATATT
TTCCGTATGCATCAAATCATTCGTTCTCCCCAAAAACCAAGAACGAAATT
AAATGA
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Synonyms
The feature 'Ec-00_001910.1' has the following synonyms
Synonym
Esi0013_0184
Esi_0013_0184