Ec-00_001900.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001900.1
Unique NameEc-00_001900.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length906
Homology
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 1550 bits (4014), Expect = 0.000e+0
Identity = 905/905 (100.00%), Postives = 905/905 (100.00%), Query Frame = 1 
Query:    1 MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPTPTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC 2715
            MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPTPTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC
Sbjct:    1 MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPTPTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC 905
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI)

HSP 1 Score: 1018 bits (2632), Expect = 0.000e+0
Identity = 505/626 (80.67%), Postives = 531/626 (84.82%), Query Frame = 1 
Query:    1 MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDG 1878
            MTPAPF SGM+G VAVFGMLAPAAV+GHGF IEPISRQYLRS+EFN+G  + VE+WAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPD VVTQDCLNMYPLDRDETD WNSPIDPDYPGRFFVNPECRG+N ETDQ+GRP+L+ G+ GLDNGYINVGRYHLPNIQC+HCVLQMKYYAYVGCHHPGYHEFEPEWPG+CAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL+ADGE  +         PEP XXXXXXXXXXXXXXXXXXXXX                                                 VAAPVYEMPVT+PV+  YSYVGCFAD+K DRVFEYM+TS TMTTAVCLEYCL+RRATYMATQYG ECWCSVDAE EYDRHSDGVCDHACGGD AD CGGFDAFDLYKITEP EPTGDEYVGCFAD+ ED +LG EIK QPDMTQAVCRTYCE+ DA FYATQ G+ECWCGMS +EEDY R GRGSCLAGCSGDP VACGGF+AFNLFKF G
Sbjct:   22 MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPTV--------PEPTXXXXXXXXXXXXXXXXXXXXXEQT----------------------------------------------VAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGG 593
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE)

HSP 1 Score: 905 bits (2340), Expect = 7.570e-316
Identity = 502/660 (76.06%), Postives = 535/660 (81.06%), Query Frame = 1 
Query:   64 PAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDN-------------------GYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMP----------VTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSD----------GVCDHACGGDAADI----CGGFDAFD------------LYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDG 1878
            P AVEGHGFCIEPISRQYLRSKEFN+G E+YVEKWAGSFNGGGADAVQARTIDNIDPDILADYG GDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTY SGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGE GETDQ+GR MLNDGEVGLD+                   GYIN GRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEF+PEWPGDCAP+KE+WLPHKNPGCSDEGQKWGNVFFGCSDITL+ADG+T  TAP       EP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXX XXXXXXXX            PVAA VYEM             +PV E Y++VGCF+D+KEDRV E M TSS MT A+C E+C+DRRATYMATQYG+ECWCS D++++Y RHSD          G+C   C GD   I    C   +A +            LYKITEPTEP G+EYVGCFADD +DRLL +EIK QPDMTQAVCRTYCE   A+FYATQYGDECWCG S+D+EDYKRHG GSC+A CSGDPT ACGGFD+FNLFK  G
Sbjct:   29 PTAVEGHGFCIEPISRQYLRSKEFNDGGEFYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGDGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQSGRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDPEWPGDCAPNKEEWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGKTFPTAP-------EPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQ----------PVAASVYEMXXXXXXXXXXXADVPV-EAYTHVGCFSDNKEDRVLEAMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHGSCRQREALENHAMGEIRNLHYLYKITEPTEPEGEEYVGCFADDGDDRLLKNEIKYQPDMTQAVCRTYCEGFGAHFYATQYGDECWCGTSDDKEDYKRHGHGSCVAQCSGDPTTACGGFDSFNLFKLKG 670
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 717 bits (1850), Expect = 6.080e-245
Identity = 419/508 (82.48%), Postives = 432/508 (85.04%), Query Frame = 1 
Query: 1267 MPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACG------------------------GFDAFNLFKFDGIAEPIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPTPTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKV-DDAVAGC 2715
            MPV+MP +EGYSYVGCFADSK+DRVFEYMKTS TMTTAVCLEYCLDRRAT+MATQ+G ECWCSVDAE+EYDRHSDGVCD  CGG+A DICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQ VCRTYCEERDAYFYATQYGDECWCGMS DE+DYKRHGRGSCLAGCSGDPTVACG                        GFDAFNLFKFDG+AEP+APTP  XXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     TNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNN DP DGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPA TSKSYGTFVKVYGNAADGVFKYQGTAE+E+G HTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFG S    +DAVAGC
Sbjct:    1 MPVSMPAEEGYSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGVAEPVAPTPGPXXXXXXXVSALTPEPVAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------TNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNRDPGDGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPADTSKSYGTFVKVYGNAADGVFKYQGTAEDEDGAHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGGSFHTAEDAVAGC 487
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE)

HSP 1 Score: 701 bits (1809), Expect = 7.230e-240
Identity = 317/324 (97.84%), Postives = 319/324 (98.46%), Query Frame = 1 
Query:    1 MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 972
            MTPAPF  GMMGVVAVFGMLAPAAVEGHGF IEPISRQYLRSKEFN+GDEYYVEKWAGSFNGGGADAVQARTIDNIDPD+LADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTY SGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGE GETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL
Sbjct:   43 MTPAPFAPGMMGVVAVFGMLAPAAVEGHGFVIEPISRQYLRSKEFNDGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 366
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI)

HSP 1 Score: 661 bits (1706), Expect = 6.670e-224
Identity = 330/537 (61.45%), Postives = 354/537 (65.92%), Query Frame = 1 
Query:  295 GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSD------GVCDHACGGD------AADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFK 1869
            GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTY SGSIIE++AVINNNHWGHIEYFLCDTADMDD DGVVTQDCLN YPLDRDETDWWNSPIDP+YPGRFFVNPECRGEN ETDQ+GRP L  G +GLD GYIN GRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL+A+GE       + T                                                 R    +                     V  P   +P  +P+                               +C E+C    A YMATQ+G+ECWCS D +++Y RHSD      G+C  AC GD      A D C          + E  E   DEYVGCFADD EDRLLG+EIK QPDMTQAVCRTYCE  DA+FYATQYGDECWCGMSNDEEDYKRHG GSCL  CSGDP   CGG DAFNL+K
Sbjct:    2 GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRAVINNNHWGHIEYFLCDTADMDDADGVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVANGEIDLQGNPSCT----------------------------------------CRRTYHRDLRNNINTQFL------------------VQIPTPPIPEQVPL------------------------------CMCYEHCYSEGAAYMATQFGFECWCSDDTDLDYSRHSDNIDGGDGLCTTACQGDTCWRERALDACAVLVDRRALLVEEGDEV--DEYVGCFADDPEDRLLGNEIKYQPDMTQAVCRTYCEGYDAHFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDPGTVCGGNDAFNLYK 448
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE)

HSP 1 Score: 541 bits (1395), Expect = 7.620e-180
Identity = 238/269 (88.48%), Postives = 252/269 (93.68%), Query Frame = 1 
Query:  181 NGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGE 987
            NG GAD VQARTI NIDPD+LADYG G+ WIVGAAWD GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTY SGSIIE++ VINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNM+PLDRDETDWWNSPID +YPGRFFVNP+CRG N ETDQ+GRP+L  G +GLD GYIN GRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEF+PEWPGDCAPDKEDWLPHKNPGC DEG+KWGNVFFGCSDITL+A+GE
Sbjct:    5 NGTGADEVQARTITNIDPDVLADYGDGNYWIVGAAWDMGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDPEWPGDCAPDKEDWLPHKNPGCGDEGRKWGNVFFGCSDITLVANGE 273
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI)

HSP 1 Score: 555 bits (1429), Expect = 5.070e-178
Identity = 391/891 (43.88%), Postives = 465/891 (52.19%), Query Frame = 1 
Query:  124 SKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWI-VGAAWDKGERCPNNNYLESDKIAVGHGVCGDPP---QGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAP----------AAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYS--YVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRH-----SDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMS--NDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPTPTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVA--GC 2715
            S  + E +   +EK AG++N GG   VQ R     DP ILA+YG G  W  +   +DKGE  PN NY+E   I+V HGVCGDP    QGG D  NTYSTPN  WP +  +  G  +E+KAV+   H+GH+E+F+CDT D+DDPD V TQ+C N YPL R E D  NSPIDP+YPGR++ +P CR    E D   R            GY+    Y LP N+ CEHCVLQM YY    C+HPGY EF P  W  +CAP+K DW+      C D        F+ CSDI + A+       P          A   PD +P                              XXXXXXXXXXXXX     X XXXXXXXXXXX             P    P    V +G    YVGCF D+KEDR+      S  MTT VCL +C +  A +MATQ+G+ECWCS D  ++Y+RH     +D VCD +C GD    CGGF++FDLYK+                                   Q      C       Y  Q G + W G +   D  D  +     C A C    TV                 EPI P+P             XXXXXXXXXXXXXXXXXXXXX                                                         PT+ CMVV +EAEDLPV GDWR+V D  ASGG YITWEGLSE QNN DPADGDI+S S+Q+PTAGTYSFKW MRQPDGVESDK ND+WLNFPDA R+GPAGT +SYGTF+KVYG A +G F+Y GT E+ +G HTQIA+EF  AGEY MEI GRSHG QIDQI++FG+ L VD+AVA  GC
Sbjct:    2 SAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDG--WYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWR---------AGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAETNWCLPCPFFHRICRWIVACRDPDAQPRSRPTATDAPVDATAEPTAAATAEPLHPTPXXXXXXXXXXXXXTPEPTXXXXXXXXXXXXXGTTMTPEPIETTPP----PTDGDVGDGEEAEYVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKL-----------------------------------QTTSTVLCSGTPVEAYE-QCGGKDWTGSTCCMDGYDCTQMVEDGCYAQCRPSVTV-----------------EPITPSPVSTTRPPVALSTSXXXXXXXXXXXXXXXXXXXXXVSE------------------------------------------------------PTSGCMVVRMEAEDLPVLGDWRVVNDADASGGKYITWEGLSEGQNNGDPADGDIMSASIQVPTAGTYSFKWLMRQPDGVESDKGNDAWLNFPDAKRYGPAGTQESYGTFIKVYGRATNGDFEYSGTGEDSHG-HTQIAVEFEEAGEYAMEISGRSHGLQIDQILVFGEDLSVDEAVANTGC 769
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 9.480e-98
Identity = 194/522 (37.16%), Postives = 253/522 (48.47%), Query Frame = 1 
Query:  100 PISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKIT-----------------EPTEPTGDEYVGC 1611
            P+SRQ  R  +F   D+  VE     +N  G   V+ R  DN+D   L  YGGG+ + +      GE   N NYLE+++IA  HGVCGDP Q   +  N YST N  W P+ ++TSG ++E+  V+N  HWGH E+F+C+T DMDDPDGV TQ+C NM+PL R + D   SPIDP+YPGR++V+PECR E  ET+Q+   +          GY    RY LP+I+CEHC+LQM YY    C H GY EF P  WP  CAP+K DW+      C   GQ +   F+ CSD ++ +DG T + AP    PDP  E                                                                                     E Y YVGC+ D ++DR+      S  MT   C EYC +  A YMATQY +EC+CS D +++Y+RH   +CD AC GD  + CGG +AFDLY+I                  EPT P  D   GC
Sbjct:   27 PMSRQLSRGIDFKAWDDPEVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREE--ETEQSSNSI---------EGYNIKMRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQ-YPEEFWACSDFSMTSDGSTPADAPM---PDPVDEEDDEDSTDGGM--------------------------------------------------------------------------EMYEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHGTAMCDKACRGDEGETCGGENAFDLYRIMPSMDLPTPATPFSEPEPEPTTPVSD---GC 452
[Close]
BLAST of Ec-00_001900.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 1.990e-73
Identity = 135/331 (40.79%), Postives = 195/331 (58.91%), Query Frame = 1 
Query:   28 MMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPT 1017
            M+ V  V   LA    +GH + + P+SR +  S+ F + D+   +     +N  G+   +AR I+ +DPD+L  +GGG  + +          PN NYLE +++AV HGVCGDP Q      NTYST ++ W P++TY SG ++E   V+N +HWGH+E+F+C+  +  DPDG+ TQ+C N YPL R E D  NSPIDP++PGR++ +P CRG+ GE DQT +P+     +  +N  +   RY LP+I+C HC+LQM Y+    CHH GY EF P  WP  CAP+KEDW+      C  +G  +   F+ CSD ++  D    S  P+  T
Sbjct:    1 MVRVCTVVLALALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQT-KPLH---AISGENMKM---RYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACG-QGGYYPEEFWACSDFSITRDATPPSPTPSVET 317
The following BLAST results are available for this feature:
BLAST of Ec-00_001900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LED7_ECTSI0.000e+0100.00EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LED9_ECTSI0.000e+080.67EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JN72_9PHAE7.570e-31676.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMV6_9PHAE6.080e-24582.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMP7_9PHAE7.230e-24097.84Chitin-binding type-4 domain-containing protein n=... [more]
D8LED5_ECTSI6.670e-22461.45EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JNS7_9PHAE7.620e-18088.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU28_ECTSI5.070e-17843.88EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LMS9_ECTSI9.480e-9837.16EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
D7FZR0_ECTSI1.990e-7340.79EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2137981..2146269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1563.5
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LED7
Length3891
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting categorysignal peptide
Gene idEc-00_001900.1
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.4.21.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001900Ec-00_001900Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2102998..2146269 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001900.1Ec-00_001900.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2137981..2145096 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001900.1.1Ec-00_001900.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2137981..2138123 +
Ec-00_001900.1.2Ec-00_001900.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2138944..2138990 +
Ec-00_001900.1.3Ec-00_001900.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2139368..2139552 +
Ec-00_001900.1.4Ec-00_001900.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2139938..2140054 +
Ec-00_001900.1.5Ec-00_001900.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2140494..2140533 +
Ec-00_001900.1.6Ec-00_001900.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2140805..2141004 +
Ec-00_001900.1.7Ec-00_001900.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2141268..2141340 +
Ec-00_001900.1.8Ec-00_001900.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2141543..2141719 +
Ec-00_001900.1.9Ec-00_001900.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2141969..2142366 +
Ec-00_001900.1.10Ec-00_001900.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2142543..2142717 +
Ec-00_001900.1.11Ec-00_001900.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2143060..2143235 +
Ec-00_001900.1.12Ec-00_001900.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2143508..2143616 +
Ec-00_001900.1.13Ec-00_001900.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2143887..2144232 +
Ec-00_001900.1.14Ec-00_001900.1.14Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2144565..2146269 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001900.1CDS:Ec-00_001900.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2137981..2138123 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0019003UTR:Ec-00_001900.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 2145097..2146269 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001900.1 ID=Ec-00_001900.1|Name=Ec-00_001900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=906bp
MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDE
YYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGE
RCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSG
SIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETD
WWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVG
RYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPH
KNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEPTPEP
TPEPTPESTPEPTPESTSEPTPESTPEPTPELTPEPTARPTPESTPESTP
EPTPEPEPTAEPEQPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEY
MKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVC
DHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDE
IKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGS
CLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAPTPEPVAPTPEPVAPTPE
PVAPTPEPVAPTPEPVAPTPEPVAPTPEPVAPTPEPVAPTPEPVAPTPEP
VAPTPEPVAPTPEPVAPTPEPVVAPTPTNDCMVVIIEAEDLPVNGDWRIV
QDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMR
QPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQ
GTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDD
AVAGC*
back to top

spliced messenger RNA

>Ec-00_001900.1 ID=Ec-00_001900.1|Name=Ec-00_001900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3891bp|location=Sequence derived from alignment at chr_00:2137981..2146269+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTCCAGCTCCGTTTACATCGGGGATGATGGGGGTGGTGGCAGTGTT
TGGCATGCTGGCACCAGCTGCCGTCGAAGGACACGGCTTCTGCATCGAGC
CAATTAGCCGGCAATACCTGCGATCAAAGGAATTTAATGAGGGCGACGAG
TACTACGTGGAGAAGTGGGCGGGATCCTTCAACGGAGGAGGTGCTGACGC
GGTCCAGGCCCGAACAATCGACAACATCGATCCTGACATCCTTGCCGACT
ACGGTGGCGGCGACGTCTGGATCGTGGGGGCGGCTTGGGACAAGGGGGAG
AGGTGCCCGAACAACAACTACCTCGAGAGCGACAAGATTGCCGTCGGACA
CGGCGTGTGCGGGGATCCTCCTCAGGGCGGCTTGGACAACCCGAACACGT
ACAGCACCCCGAACACCCTCTGGCCTCCCATCTCGACGTACACGTCGGGA
TCCATCATCGAGCTCAAGGCCGTCATCAACAACAACCACTGGGGGCACAT
CGAGTACTTCCTGTGCGATACCGCTGACATGGACGACCCTGACGGCGTGG
TGACCCAGGACTGCTTGAACATGTACCCGCTCGACCGCGACGAGACCGAT
TGGTGGAACAGCCCCATCGACCCGGACTACCCCGGGCGTTTCTTCGTGAA
CCCCGAGTGCCGCGGTGAAAATGGAGAGACCGACCAAACAGGACGGCCCA
TGCTCAACGACGGGGAGGTTGGCCTGGACAATGGCTACATCAACGTTGGA
CGTTACCATCTGCCGAACATCCAGTGCGAGCACTGCGTCCTCCAGATGAA
ATACTACGCGTACGTCGGGTGCCACCACCCCGGCTACCACGAGTTCGAGC
CCGAGTGGCCGGGAGATTGCGCGCCGGACAAAGAGGATTGGCTGCCGCAC
AAGAACCCCGGTTGCAGCGACGAAGGCCAGAAGTGGGGCAACGTGTTCTT
CGGCTGCTCCGACATCACTCTGCTGGCCGACGGCGAAACGTCCTCCACGG
CTCCCGCGGCACCCACGCCGGACCCTGAACCTGAACCGACTCCCGAGCCG
ACACCGGAACCGACTCCCGAATCGACCCCTGAACCTACTCCCGAATCGAC
TTCCGAGCCTACTCCCGAATCGACGCCCGAGCCAACCCCCGAACTGACTC
CGGAGCCTACTGCTAGGCCAACTCCCGAGTCGACGCCCGAGTCAACCCCC
GAACCGACGCCTGAGCCTGAGCCCACTGCGGAGCCCGAACAACCAGTTGC
TGCTCCTGTGTACGAAATGCCCGTAACCATGCCCGTCGACGAGGGTTACT
CGTACGTTGGCTGCTTTGCGGACAGCAAGGAAGACCGAGTGTTCGAGTAC
ATGAAGACTTCGTCAACCATGACCACCGCGGTGTGCCTCGAGTACTGCTT
GGACAGGCGAGCAACCTACATGGCCACCCAGTACGGATACGAGTGCTGGT
GCAGCGTCGACGCAGAAGTCGAGTACGACCGCCACTCCGATGGCGTGTGC
GATCACGCGTGCGGCGGGGATGCAGCCGACATTTGCGGTGGCTTCGACGC
TTTCGACCTCTACAAGATCACGGAACCGACGGAACCCACGGGCGATGAGT
ACGTGGGGTGCTTCGCCGACGACCGGGAAGACCGGTTGTTGGGCGACGAG
ATCAAGTTGCAGCCCGACATGACCCAGGCCGTCTGCCGCACGTACTGCGA
GGAACGCGACGCCTACTTCTACGCCACCCAGTACGGCGACGAGTGCTGGT
GCGGAATGTCCAACGACGAGGAGGACTACAAGAGGCACGGGCGAGGATCA
TGTCTCGCGGGCTGCTCCGGTGACCCTACGGTTGCGTGCGGTGGGTTCGA
TGCGTTCAACTTGTTCAAGTTTGACGGAATCGCCGAACCTATCGCTCCCA
CACCGGAACCTGTCGCTCCCACACCGGAACCTGTCGCACCCACACCGGAA
CCTGTAGCACCCACACCGGAACCTGTCGCTCCAACACCGGAACCTGTCGC
ACCCACACCGGAACCTGTCGCTCCCACACCGGAACCTGTCGCACCCACAC
CGGAACCTGTAGCACCCACACCTGAACCTGTCGCTCCCACACCGGAACCT
GTCGCGCCCACACCGGAACCTGTCGCGCCCACACCGGAACCTGTCGCACC
TACACCCGAACCGGTTGTCGCGCCCACACCTACCAACGACTGCATGGTGG
TCATCATCGAAGCCGAAGACCTCCCGGTCAACGGTGACTGGCGCATCGTC
CAGGACAATGCCGCCAGCGGCGGGGCTTACATCACCTGGGAGGGGCTGTC
TGAGGCCCAAAACAACAGCGACCCGGCGGACGGCGACATCATCTCCACCA
GCGTGCAGATCCCCACCGCGGGCACCTACTCGTTCAAGTGGGCCATGCGC
CAGCCTGACGGCGTCGAGAGCGACAAGGCCAACGACAGCTGGCTGAACTT
CCCGGACGCGGATAGGTTCGGGCCGGCCGGCACCTCCAAGAGCTACGGCA
CCTTCGTGAAGGTGTACGGTAACGCCGCGGACGGCGTTTTCAAGTATCAG
GGGACCGCCGAGGAGGAGAACGGCGACCACACCCAGATCGCCATCGAGTT
TGCCGCGGCCGGCGAGTACGAGATGGAAATCGGAGGCCGTTCGCACGGCC
ACCAGATCGACCAGATTGTTTTGTTCGGGGACTCCCTCAAGGTCGACGAC
GCTGTTGCTGGCTGCTAGGAGTGTAAGGTTCAGCGTGATGGGGAGTCCCT
GCTCCCGTTGTCGTCACAGGGAGTGAATGGAGGCTTGGTTGCCGGAATGT
TTTTGATGCATAGCTCTTACTCACTCGCCGGAAATCGATCCGTGGACCAG
TCTTTCTTTTCATTGATGTTGTCACCCGGCATGTAGGTGAACTACCGCTG
TCGGTCGTGTTGTGTTAATTCCATTTGCAGTCGTATCGTTCTACTAGTGA
GTCAGAAGTCTCGACACCACACATATCGGGAGATTGCGTGAGTTGACTTG
ACAGACGGACTTGTTGCATTCTCTCATGTTATCACATCAAACCTCGTGCT
GTGGGTCCTTCTGGGCACGAGGATGGCTCTTGTTTTTCACTCTTTTACAC
ATAACGTTGGTCGAATTTATAGGCTTCGCTGTCATTCGGCCTCCAGTCTC
GACACGGCCGCGTTGTTGTGCTGTGGCTGATTCTCCCGTCTTTTTGTTAC
ATTTGTCGGTAACCTTCCTTGTCGTAAATATTTTTCGTTCTTGACGTGTT
TTGGTTTGTGGGGTTTTGTCGCATTTGTTGTGGGCGCACAAGTCTCTTCA
CATGACGGTATGTAGATTTGACGCACCCACGGCGGTCACATGAGGTGGAG
GAAAACGGTAGTTCAGCATTTTATTTTGTATATCGTGTGGGCCGTATGGT
ACTGTCTCTTATTTCCTTCATTTAGAGCATTTTTTTTTTGGAATGTTTAT
TTTTTGGCTCCTGGAGTACTCCTAGCGCGTGTTTGTAGGACAAAAGTGAA
AAGAGAGTCTAATCGAGTTTCTAGGACATTTCGTAGCTAGGAGAGCGTGC
TGTACTAGAATCAAGTGGCATGTTTCAGGTACGTACGTCATTTAATGAAG
TGTGAGCAGGAATCGTCGACTCAGCTGTGCGCAATAACAAACCTCGGCGT
AAAATGTTGCTGGGCTAGAGAAAATGGCATGTTTCAGTCACGCCATTTAG
ACCCCATGATCGGTGAGAGCAGGAATCTTCGCAAAGCGCAGCTTTACGCA
ACAACAAACTTCGGTAATGGATGTCGTGAGTCGCGTTCCAAATTAAGCAG
AGGACGCGCAGAAATGACTTCTGAGCCGATTATGAACGAGGAGGACCGAT
TTGATTTACCCATTTCATCCTCGCAACACGTGATGACCAAA
back to top

protein sequence of Ec-00_001900.1

>Ec-00_001900.1 ID=Ec-00_001900.1|Name=Ec-00_001900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=906bp
MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDE
YYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGE
RCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSG
SIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETD
WWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVG
RYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPH
KNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEPTPEP
TPEPTPESTPEPTPESTSEPTPESTPEPTPELTPEPTARPTPESTPESTP
EPTPEPEPTAEPEQPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEY
MKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVC
DHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDE
IKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGS
CLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAPTPEPVAPTPEPVAPTPE
PVAPTPEPVAPTPEPVAPTPEPVAPTPEPVAPTPEPVAPTPEPVAPTPEP
VAPTPEPVAPTPEPVAPTPEPVVAPTPTNDCMVVIIEAEDLPVNGDWRIV
QDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMR
QPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQ
GTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDD
AVAGC*
back to top

mRNA from alignment at chr_00:2137981..2146269+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001900.1 ID=Ec-00_001900.1|Name=Ec-00_001900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8289bp|location=Sequence derived from alignment at chr_00:2137981..2146269+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACTCCAGCTCCGTTTACATCGGGGATGATGGGGGTGGTGGCAGTGTT
TGGCATGCTGGCACCAGCTGCCGTCGAAGGACACGGCTTCTGCATCGAGC
CAATTAGCCGGCAATACCTGCGATCAAAGGAATTTAATGAGGGGTGAGAG
GCACGCAAGCATGATGACCCATGCGCTGCAGCTGTTGCTGTTGTTCTACA
GTAGTAGAGGAGCGACTGCAGCAGTTACACGTACGCGTCATGGGCCTCGT
CTAGCCTCTACTTGCTTTGCTGTGTGTGTTTGTTTGGTCGGGGACGTTGC
GAAACACAACGATCATGGCACACAGCTTTCTTGGCGATAGGATCTTTGCA
ACCCGGTGTCGCAATTTTTTATGGGTCGTGTCGACAATGGCAGCCGTGCG
GATCTCGCACGCTGGTGTCTTGAGTATGTGCTCGACCACTGTGTACCAAT
ATGGCGCTTCGGGTGGTACAGCAGCAGCACCAGCAGCATGTTCCAAGAGC
ATACGCTTTTTGCGCACCCCCCGCCCGTTCTGTTGAACGGAGCGGTATGT
AGATTAGTGTCGTCGGAATCAGAACAAAGATCGAATTGCCACACCTGCGA
AAGGTTTTGAGTAGAGCATCTGCTTGCTGCAGAGTTGATGCTCCTGCCAG
CTCCGCCCCGATAATCGTTGCATGATGTTCGAAGAATTTGAAGTGCCGGA
GCATACCTTTGTTCATGGACATGACGGTTTGCTTTGAATCGAGCACCTGG
TAATTATTTCAGCATTTCGGCGCGACATGCTGCAATTGAAACGTTCGTTT
GTTCGGGCACACGCCCGAAGAGCCGTTCTTTTCGTTTTGACATGGGTGAT
GTGATATTCGTTCCAGTAAAACAAAACCAACAAATGTACACAAGATGTAC
TCACGATTCTCTCCTTTGCCTTTACTCCTCCCTCCTCCCGCGCCCCGCCC
ACGACACACGCAGCGACGAGTACTACGTGGAGAAGTGGGCGGGATCCTTC
AACGGAGGAGGTAATGTGGCGTACCATGCGACTTGGAAGTATTGCCCACT
TCGAAATGTATGCACTAAATACAGTAGTAGTTTGGGAAGATATGATGCCG
ACGAGATGGATGTTGGCACACTAGTTTATAGCCAGGTAGGTTTCCAATAG
CCCTGCATTCGTCAGTTCGTTAGGCGGACGCCTGCCGGGATACACACATT
ACATAAGAGCGTAGCCGGTATACGGCATGCACCACCATTACTCATCTCCC
ACAAAGACGACTCACAAAGTTCGTACACCGCCGACCATGGGTCGCCGCTT
TAGCGTCCACCACCCCCCCCCCCGGCATGGAAGGTCCACACGTTCACACT
CGCAGCGTCGTTGCTGAATCCTTGCGCTGAATCGTAGGTGCTGACGCGGT
CCAGGCCCGAACAATCGACAACATCGATCCTGACATCCTTGCCGACTACG
GTGGCGGCGACGTCTGGATCGTGGGGGCGGCTTGGGACAAGGGGGAGAGG
TGCCCGAACAACAACTACCTCGAGAGCGACAAGATTGCCGTCGGACACGG
CGTGTGCGGGGATCCTCCTCAGGTCAGTGACGCGATCGCTTCCTAGCGAG
AGACACGGTGAATGCACCAAGATTGATGACCTACCCACGACAGTGTGTCG
CAAAATGCCTTGGCGCAGCATTGTGATAGCGATTTGAGCATGTGGAATAA
GAAAATGACATACTATTCTGTAGACTTTCCACCAGAGTAAGAAGCGCCTT
CGATATGTCGCTCACTCAACACCTTTCCTCGAGGGGCGTTCGTTTTGTGT
TTTGGTTGTACAATGAACTTGACATGTGCACCTTCTTGCTTAGTTCTCAA
ATCGGCCACACACCGGGCAAACCCCGATGTGGCATATGCCGTATTCACGA
ACTTTACCGAAATATTCCCCGACAACACCCATTGCCTGCGGATAAAAAAA
AACACAGGGCGGCTTGGACAACCCGAACACGTACAGCACCCCGAACACCC
TCTGGCCTCCCATCTCGACGTACACGTCGGGATCCATCATCGAGCTCAAG
GCCGTCATCAACAACAACCACTGGGTGAGTCGGTCCTTCTACACGCCTCC
AAGCAAGCCAGCTGTGCGCCTCGGCCCCCAGGCACACGCCGCTGGAAACA
AGAAATGCCGTGATGTGATGAGTCAAGCCCCTAGTCAGGCGTAGGTGTTG
TTTGCTTCACAGGTGAGGCAAGAACATCATTTCTGAAAATCGTGGAGTGT
TGACACATCACACAAGCAGTATTTTGCGAAACTCATTCTTGTATCCGGGC
GGTGCGAAAAGTGTCCGAGGCTACTAATTCAGGAGTTCTACACTAATCAC
TGTCATCACGGCCCGTACGGCGAAACACGTTTAAATAAATCAAAAGATGA
TCCCCAGCTTAGTGCAACAGCAGTCATCTCAGTGAGATTGAACGAGCTTC
ACGTTTTTTAAATCACATCTTGTGATCCCCGCCCGCCCGCCCCTCCCGTC
CCGGAACCAACAGGGGCACATCGAGTACTTCCTGTGCGATACCGCTGACA
TGGGTGAGTCTCGTGCATCAGTCCGTTGCTGGTTGGTCATTTTTTTGGAA
GCTGGTCTCCTTGACCTACGCTGCGCATCATTGCCGTATCATTATTGTTG
TCCGCCATACCGACAAGACACGGTTAGCCGACACACGATGTCAGTCATCG
TAGGTGCGCTCGTGAGATCTTACTTCGGTCCCTGTTGAACACGGTAAATT
TACGCCAGACATGCAAAGCCACTCCTATCTGAGTCCTTCCCCCCGCCCCA
ACCTTGGTCCCCGTCCGAAATTAGACGACCCTGACGGCGTGGTGACCCAG
GACTGCTTGAACATGTACCCGCTCGACCGCGACGAGACCGATTGGTGGAA
CAGCCCCATCGACCCGGACTACCCCGGGCGTTTCTTCGTGAACCCCGAGT
GCCGCGGTGAAAATGGAGAGACCGACCAAACAGGACGGCCCATGCTCAAC
GACGGGGAGGTTGGCCTGGACAATGTGAGAAACCTGTCCATCTTGGTAGA
TGTCCTGCTTGTATGTGGCTCGCATATCCAGAGCACGCCAAGCAGCACCA
TTGCTGCGAGTGTACTATAACTCAAGAACGCCGTTTCATTGTTCGAGGGG
AGGGGGGCCTGGAGGATAGCCCTACTCATCGTGCCGCGTGTGCCAACCCG
TTGCGTCCCCAGGGAAAAACACCTACCGGGGCCCCGGCCAACATTCTCGA
ACTCACCCCCCGGTGCCCTACCTCTTGACTTTTGCAGGGCTACATCAACG
TTGGACGTTACCATCTGCCGAACATCCAGTGCGAGCACTGCGTCCTCCAG
ATGAAATACTGTGAGTACGTACGCGTCCTGGACCTCAACGATACCACCAT
TTTTGTGTAGTTTCTGGAACCAGCGGCGTAAATTTCCACGTGTTTCTTGA
TCCGTATGAACCTTTTCCCCAGCAAACAGTTTGTACTTGGAGTCACTGTG
CAGCCCCTTGTTGACCGTAAGGACTAGAGCTCACCCCAGAGACATCCTTC
TACTTTTGCCAGACGCGTACGTCGGGTGCCACCACCCCGGCTACCACGAG
TTCGAGCCCGAGTGGCCGGGAGATTGCGCGCCGGACAAAGAGGATTGGCT
GCCGCACAAGAACCCCGGTTGCAGCGACGAAGGCCAGAAGTGGGGCAACG
TGTTCTTCGGCTGCTCCGACATCACTCTGCTGGCCGACGGTGAGATTGAT
GATCCCTAGTCAACCCGTATTCTACCCGCAGTTGTCATGTGGACAACCTC
CCCTTTTTACTCCTTGCATCAACAACCAGGCAATTGGGTGAAATACGCAT
GCAAAAGTAGGACTTACCCTGCTTGTAACGCTCTGTGCGTAGGTCGAACT
TTGTAAACAAGGCGGTTCGAGGGGTCCATCATTCCGGTAGAAACGTGCGC
ATGCCTCTAAACGTGGATCCACTTTTGTTCCTTTACAGGCGAAACGTCCT
CCACGGCTCCCGCGGCACCCACGCCGGACCCTGAACCTGAACCGACTCCC
GAGCCGACACCGGAACCGACTCCCGAATCGACCCCTGAACCTACTCCCGA
ATCGACTTCCGAGCCTACTCCCGAATCGACGCCCGAGCCAACCCCCGAAC
TGACTCCGGAGCCTACTGCTAGGCCAACTCCCGAGTCGACGCCCGAGTCA
ACCCCCGAACCGACGCCTGAGCCTGAGCCCACTGCGGAGCCCGAACAACC
AGTTGCTGCTCCTGTGTACGAAATGCCCGTAACCATGCCCGTCGACGAGG
GTTACTCGTACGTTGGCTGCTTTGCGGACAGCAAGGAAGACCGAGTGTTC
GAGTACATGAAGACTTCGTCAACCATGACCACCGCGGTAAGTTTACGCAT
ATCTTTGAATGCGCTTTTTGGTGACTCTTTCGTTAGTGTTTGTTCTCTCC
CACCCGAGCTCCCTCTTTATTATAGATTTTGATGTCCTGCTTCCTATGCC
CCTTGGTATTCGCTTTGGACCCGACCAGTAAGTGATAATTGGTTTACATT
TTCCCTACCCAGGTGTGCCTCGAGTACTGCTTGGACAGGCGAGCAACCTA
CATGGCCACCCAGTACGGATACGAGTGCTGGTGCAGCGTCGACGCAGAAG
TCGAGTACGACCGCCACTCCGATGGCGTGTGCGATCACGCGTGCGGCGGG
GATGCAGCCGACATTTGCGGTGGCTTCGACGCTTTCGGTGAGTGTTTTTT
TTTCGTCTCTCGTTGTATGGGGGGAGCATTATCGCCACCTGGGAAGAACA
TAGCGGGCCCGCCTATTCTTGCAAGTATCCGGATATAATATACCTGGATG
TCTCGGAAAAAGGGGTTTGGCTTCACGGAGATGCGTGAAGACGGTCGTTG
AGACGACGCGGTTTCATGTCGGCGATGATGGCTGTGCTTTCTTAGGAAAG
CGTGATGTTGATGAGGCGAGCTGTCGTTTTTTTTGTCCATTGATATGACA
CATGTATGCATACGCATGATGGGCGTCGCCTGAACACGATCTTCACCCCG
CCTTCCTGAACCTGCGCCGTGGTATCCAGACCTCTACAAGATCACGGAAC
CGACGGAACCCACGGGCGATGAGTACGTGGGGTGCTTCGCCGACGACCGG
GAAGACCGGTTGTTGGGCGACGAGATCAAGTTGCAGCCCGACATGACCCA
GGCCGTCTGCCGCACGTACTGCGAGGAACGCGACGCCTACTTCTACGCCA
CCCAGGTGGAGTTTTGTGTACCGTCGGATTTTCGTGCTGCTAGTACTCTT
GGCGCTTGGGTTCCTTTTTGCCTTGTTGATTGTGTAAATGCCTTAATTCT
ATTCGCTTCGTGCTGAATAGTGCCCTTTGCCTCGTTCTGTATGCACCGGT
GTTTTATTCGCTGCGCCCCGTGGCACGCCTCTCTGTGTCCTTCACCTTCA
CCTTGTGGCTAACCAGTGTGTTGCTCCGTTGCTTTCGATGTCCGCCTCCG
GCGCTTGTTTGTCTTTTGCGTCAACAGTACGGCGACGAGTGCTGGTGCGG
AATGTCCAACGACGAGGAGGACTACAAGAGGCACGGGCGAGGATCATGTC
TCGCGGGCTGCTCCGGTGACCCTACGGTTGCGTGCGGTGAGTGAGATCGG
AAGATGGGGTGTAGGAAGACCTGGCAACTACAGCGGCACCGTGTGGTACA
TGCATGCCGACGTCGAGACCGGATATGCAGGAAGAGACTTACAGGTGGCG
CTCGCCGAGTGATCTCTAACAGTACTTTTGGGCCGGATGTGGTGTTCCCG
CGTGAAGTCCGTGCTTGGTGACAAGTGAGAGCCTTGTAGACATGTCTTAC
TATCTTCTTGACACTAGTCGTTCCACCCCTTCCTTGCCGTTACCCTTTTG
TCCCAGGTGGGTTCGATGCGTTCAACTTGTTCAAGTTTGACGGAATCGCC
GAACCTATCGCTCCCACACCGGAACCTGTCGCTCCCACACCGGAACCTGT
CGCACCCACACCGGAACCTGTAGCACCCACACCGGAACCTGTCGCTCCAA
CACCGGAACCTGTCGCACCCACACCGGAACCTGTCGCTCCCACACCGGAA
CCTGTCGCACCCACACCGGAACCTGTAGCACCCACACCTGAACCTGTCGC
TCCCACACCGGAACCTGTCGCGCCCACACCGGAACCTGTCGCGCCCACAC
CGGAACCTGTCGCACCTACACCCGAACCGGTTGTCGCGCCCACACCTACC
AAGTAAGTGGGGCCTGCTTTCCGAGCGTCTATTCTCCGGCTTGCTAATGG
GTTACATACTTGCCAACGACAACTCGCATATCGCACACTCCCAGGTGTTT
AGGTGCGTTCTGTTCCGAAATCTTTCTGTAGAGTGTTGCCCCAGGTACGT
CTGGTGGCGTAACAGATGCATGGCATATACGTGGGACACGGTTCATACCT
GTCTGGGTGACCAGTTCCCCCAGCTGTTTTCTCAGGTGCGATAGGCTCTT
AACTATATAGTTCGTTCGCCCTTTGTCTCCGCCCTCTCCCCCTAACGATG
CCTCCCTACATATTCGCGCCTTTCCCTTGCGCAGCGACTGCATGGTGGTC
ATCATCGAAGCCGAAGACCTCCCGGTCAACGGTGACTGGCGCATCGTCCA
GGACAATGCCGCCAGCGGCGGGGCTTACATCACCTGGGAGGGGCTGTCTG
AGGCCCAAAACAACAGCGACCCGGCGGACGGCGACATCATCTCCACCAGC
GTGCAGATCCCCACCGCGGGCACCTACTCGTTCAAGTGGGCCATGCGCCA
GCCTGACGGCGTCGAGAGCGACAAGGCCAACGACAGCTGGCTGAACTTCC
CGGACGCGGATAGGTTCGGGCCGGCCGGCACCTCCAAGAGCTACGGCACC
TTCGTGAAGGTGTACGGTAACGCCGCGGACGGCGTTTTCAAGTATCAGGG
GACCGCCGAGGAGGAGAACGGCGACCACACCCAGATCGCCATCGAGTTTG
CCGCGGCCGGCGAGTACGAGATGGAAATCGGAGGCCGTTCGCACGGCCAC
CAGATCGACCAGATTGTTTTGTTCGGGGACTCCCTCAAGGTCGACGACGC
TGTTGCTGGCTGCTAGGAGTGTAAGGTTCAGCGTGATGGGGAGTCCCTGC
TCCCGTTGTCGTCACAGGGAGTGAATGGAGGCTTGGTTGCCGGAATGTTT
TTGATGCATAGCTCTTACTCACTCGCCGGAAATCGATCCGTGGACCAGTC
TTTCTTTTCATTGATGTTGTCACCCGGCATGTAGGTGAACTACCGCTGTC
GGTCGTGTTGTGTTAATTCCATTTGCAGTCGTATCGTTCTACTAGTGAGT
CAGAAGTCTCGACACCACACATATCGGGAGATTGCGTGAGTTGACTTGAC
AGACGGACTTGTTGCATTCTCTCATGTTATCACATCAAACCTCGTGCTGT
GGGTCCTTCTGGGCACGAGGATGGCTCTTGTTTTTCACTCTTTTACACAT
AACGTTGGTCGAATTTATAGGCTTCGCTGTCATTCGGCCTCCAGTCTCGA
CACGGCCGCGTTGTTGTGCTGTGGCTGATTCTCCCGTCTTTTTGTTACAT
TTGTCGGTAACCTTCCTTGTCGTAAATATTTTTCGTTCTTGACGTGTTTT
GGTTTGTGGGGTTTTGTCGCATTTGTTGTGGGCGCACAAGTCTCTTCACA
TGACGGTATGTAGATTTGACGCACCCACGGCGGTCACATGAGGTGGAGGA
AAACGGTAGTTCAGCATTTTATTTTGTATATCGTGTGGGCCGTATGGTAC
TGTCTCTTATTTCCTTCATTTAGAGCATTTTTTTTTTGGAATGTTTATTT
TTTGGCTCCTGGAGTACTCCTAGCGCGTGTTTGTAGGACAAAAGTGAAAA
GAGAGTCTAATCGAGTTTCTAGGACATTTCGTAGCTAGGAGAGCGTGCTG
TACTAGAATCAAGTGGCATGTTTCAGGTACGTACGTCATTTAATGAAGTG
TGAGCAGGAATCGTCGACTCAGCTGTGCGCAATAACAAACCTCGGCGTAA
AATGTTGCTGGGCTAGAGAAAATGGCATGTTTCAGTCACGCCATTTAGAC
CCCATGATCGGTGAGAGCAGGAATCTTCGCAAAGCGCAGCTTTACGCAAC
AACAAACTTCGGTAATGGATGTCGTGAGTCGCGTTCCAAATTAAGCAGAG
GACGCGCAGAAATGACTTCTGAGCCGATTATGAACGAGGAGGACCGATTT
GATTTACCCATTTCATCCTCGCAACACGTGATGACCAAA
back to top

Coding sequence (CDS) from alignment at chr_00:2137981..2146269+

>Ec-00_001900.1 ID=Ec-00_001900.1|Name=Ec-00_001900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2718bp|location=Sequence derived from alignment at chr_00:2137981..2146269+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACTCCAGCTCCGTTTACATCGGGGATGATGGGGGTGGTGGCAGTGTT
TGGCATGCTGGCACCAGCTGCCGTCGAAGGACACGGCTTCTGCATCGAGC
CAATTAGCCGGCAATACCTGCGATCAAAGGAATTTAATGAGGGCGACGAG
TACTACGTGGAGAAGTGGGCGGGATCCTTCAACGGAGGAGGTGCTGACGC
GGTCCAGGCCCGAACAATCGACAACATCGATCCTGACATCCTTGCCGACT
ACGGTGGCGGCGACGTCTGGATCGTGGGGGCGGCTTGGGACAAGGGGGAG
AGGTGCCCGAACAACAACTACCTCGAGAGCGACAAGATTGCCGTCGGACA
CGGCGTGTGCGGGGATCCTCCTCAGGGCGGCTTGGACAACCCGAACACGT
ACAGCACCCCGAACACCCTCTGGCCTCCCATCTCGACGTACACGTCGGGA
TCCATCATCGAGCTCAAGGCCGTCATCAACAACAACCACTGGGGGCACAT
CGAGTACTTCCTGTGCGATACCGCTGACATGGACGACCCTGACGGCGTGG
TGACCCAGGACTGCTTGAACATGTACCCGCTCGACCGCGACGAGACCGAT
TGGTGGAACAGCCCCATCGACCCGGACTACCCCGGGCGTTTCTTCGTGAA
CCCCGAGTGCCGCGGTGAAAATGGAGAGACCGACCAAACAGGACGGCCCA
TGCTCAACGACGGGGAGGTTGGCCTGGACAATGGCTACATCAACGTTGGA
CGTTACCATCTGCCGAACATCCAGTGCGAGCACTGCGTCCTCCAGATGAA
ATACTACGCGTACGTCGGGTGCCACCACCCCGGCTACCACGAGTTCGAGC
CCGAGTGGCCGGGAGATTGCGCGCCGGACAAAGAGGATTGGCTGCCGCAC
AAGAACCCCGGTTGCAGCGACGAAGGCCAGAAGTGGGGCAACGTGTTCTT
CGGCTGCTCCGACATCACTCTGCTGGCCGACGGCGAAACGTCCTCCACGG
CTCCCGCGGCACCCACGCCGGACCCTGAACCTGAACCGACTCCCGAGCCG
ACACCGGAACCGACTCCCGAATCGACCCCTGAACCTACTCCCGAATCGAC
TTCCGAGCCTACTCCCGAATCGACGCCCGAGCCAACCCCCGAACTGACTC
CGGAGCCTACTGCTAGGCCAACTCCCGAGTCGACGCCCGAGTCAACCCCC
GAACCGACGCCTGAGCCTGAGCCCACTGCGGAGCCCGAACAACCAGTTGC
TGCTCCTGTGTACGAAATGCCCGTAACCATGCCCGTCGACGAGGGTTACT
CGTACGTTGGCTGCTTTGCGGACAGCAAGGAAGACCGAGTGTTCGAGTAC
ATGAAGACTTCGTCAACCATGACCACCGCGGTGTGCCTCGAGTACTGCTT
GGACAGGCGAGCAACCTACATGGCCACCCAGTACGGATACGAGTGCTGGT
GCAGCGTCGACGCAGAAGTCGAGTACGACCGCCACTCCGATGGCGTGTGC
GATCACGCGTGCGGCGGGGATGCAGCCGACATTTGCGGTGGCTTCGACGC
TTTCGACCTCTACAAGATCACGGAACCGACGGAACCCACGGGCGATGAGT
ACGTGGGGTGCTTCGCCGACGACCGGGAAGACCGGTTGTTGGGCGACGAG
ATCAAGTTGCAGCCCGACATGACCCAGGCCGTCTGCCGCACGTACTGCGA
GGAACGCGACGCCTACTTCTACGCCACCCAGTACGGCGACGAGTGCTGGT
GCGGAATGTCCAACGACGAGGAGGACTACAAGAGGCACGGGCGAGGATCA
TGTCTCGCGGGCTGCTCCGGTGACCCTACGGTTGCGTGCGGTGGGTTCGA
TGCGTTCAACTTGTTCAAGTTTGACGGAATCGCCGAACCTATCGCTCCCA
CACCGGAACCTGTCGCTCCCACACCGGAACCTGTCGCACCCACACCGGAA
CCTGTAGCACCCACACCGGAACCTGTCGCTCCAACACCGGAACCTGTCGC
ACCCACACCGGAACCTGTCGCTCCCACACCGGAACCTGTCGCACCCACAC
CGGAACCTGTAGCACCCACACCTGAACCTGTCGCTCCCACACCGGAACCT
GTCGCGCCCACACCGGAACCTGTCGCGCCCACACCGGAACCTGTCGCACC
TACACCCGAACCGGTTGTCGCGCCCACACCTACCAACGACTGCATGGTGG
TCATCATCGAAGCCGAAGACCTCCCGGTCAACGGTGACTGGCGCATCGTC
CAGGACAATGCCGCCAGCGGCGGGGCTTACATCACCTGGGAGGGGCTGTC
TGAGGCCCAAAACAACAGCGACCCGGCGGACGGCGACATCATCTCCACCA
GCGTGCAGATCCCCACCGCGGGCACCTACTCGTTCAAGTGGGCCATGCGC
CAGCCTGACGGCGTCGAGAGCGACAAGGCCAACGACAGCTGGCTGAACTT
CCCGGACGCGGATAGGTTCGGGCCGGCCGGCACCTCCAAGAGCTACGGCA
CCTTCGTGAAGGTGTACGGTAACGCCGCGGACGGCGTTTTCAAGTATCAG
GGGACCGCCGAGGAGGAGAACGGCGACCACACCCAGATCGCCATCGAGTT
TGCCGCGGCCGGCGAGTACGAGATGGAAATCGGAGGCCGTTCGCACGGCC
ACCAGATCGACCAGATTGTTTTGTTCGGGGACTCCCTCAAGGTCGACGAC
GCTGTTGCTGGCTGCTAG
back to top
Synonyms
The feature 'Ec-00_001900.1' has the following synonyms
Synonym
Esi0013_0183
Esi_0013_0183