Ec-00_001690.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001690.2
Unique NameEc-00_001690.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length507
Homology
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BLAST of Ec-00_001690.2 vs. uniprot
Match: D8LEC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC1_ECTSI)

HSP 1 Score: 494 bits (1271), Expect = 6.720e-167
Identity = 249/250 (99.60%), Postives = 250/250 (100.00%), Query Frame = 1 
Query:  178 MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKL 927
            MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTK+
Sbjct:    1 MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKV 250
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BLAST of Ec-00_001690.2 vs. uniprot
Match: A0A835ZE72_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE72_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.380e-24
Identity = 89/265 (33.58%), Postives = 133/265 (50.19%), Query Frame = 1 
Query:  214 FRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSL---------SLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAK------------------------VLGQRFWRKATKRRRKARMVGADLC 909
            F W FG  R  +++  L++  LV  +  +  +K   D  R++  +  VD   + K+DI  FF+YF IE S YN RAF+LLAF  +  D +G                      + F +F VSMY+Y T  H  LVRF+F ++++GK +    DV   V+LL +  +R + TT ++M ++D     +V++E F   E++LGSML+PAF+LQK LR K                        VL +RFW +A + R  A   GAD  
Sbjct:   13 FLW-FGVSRTDFKRTVLEDRILVEFLAKI-HLK-QVDALRLLAAYNKVDSDRSGKIDIGEFFDYFNIEHSAYNVRAFKLLAFSTQ--DGSGXXXXXXXXXXXXXXXXXXXXAEMSFAEFLVSMYSYCTQSHGTLVRFSFRIISAGKRYITLGDVGAFVALLITNPARHQETTASMMQVLDSEKTGRVAWEQFLANEKKLGSMLYPAFRLQKMLRNKSSTLTASAPAADNRPRSSRAARLQVLSRRFWARAARGR--AANAGADAA 270
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BLAST of Ec-00_001690.2 vs. uniprot
Match: A0A6H5K884_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K884_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.080e-8
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = -1 
Query: 2245 RRCLVLRCVSKVDKLRFEEIIARNQACLIQRAPAIVETSAES 2370
            +R LVLRCVSKVDKLRFEEIIARNQA L QRAPAIVET+ ES
Sbjct:  358 KRWLVLRCVSKVDKLRFEEIIARNQAGLAQRAPAIVETTVES 399
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BLAST of Ec-00_001690.2 vs. uniprot
Match: A0BXL7_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BXL7_PARTE)

HSP 1 Score: 64.3 bits (155), Expect = 4.190e-7
Identity = 45/207 (21.74%), Postives = 99/207 (47.83%), Query Frame = 1 
Query:  268 NEPLVVLVRNMLG------IKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEF----SEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKE-FCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFW 855
            +E +V+   + +G      +    DV+ + ++F  +D  GT  +  + FFE+   EF    S Y +  F+L+    EQ+                 + F ++  ++  Y     +++V + F ++ S  + F +++D++  +    + K          + ++D    DK+S E FRK ++++  + +PAF+LQ+ LR+++ G ++W
Sbjct:   15 DEQIVISTNSRIGYIQKKFLFSQADVSNLHKIFRKMDTMGTGYISQQNFFEFLDEEFNSVVSPYIEYLFQLIEKEVEQK-----------------VSFSEWLPAISLYCLYTKDSVVAYVFQMLDSDHDNFISKKDLMNFLVQKRNGKKIFYYNYMKAVELLDIERPDKISLEQFRKIQQQIPFICYPAFRLQRELRSRIFGVKYW 204
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BLAST of Ec-00_001690.2 vs. uniprot
Match: A0A225WT84_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WT84_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.420e-6
Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 1 
Query:  532 FDQFFVSMYNYGTLLHEALVRFAFDVM---ASGK------EFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGA--DLCREYTKL 927
            F +F ++++NY +  H +LVRFAFD+     SG+      E C R+ V G    ++S   ++    D L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R    +     D  ++ TKL
Sbjct:   11 FIEFVLAVWNYCSFNHASLVRFAFDLYDIDGSGEIEHDEIERCVRE-VWGAGWEVNSNAHKI---VDKLDAIMANTTNNRLSATLFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWARATEKRASINVAALNWDHVKDMTKL 149
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BLAST of Ec-00_001690.2 vs. uniprot
Match: A0A6A3MZN3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZN3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.800e-6
Identity = 58/225 (25.78%), Postives = 102/225 (45.33%), Query Frame = 1 
Query:  229 GFRRALYEQLFLK----NEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSE----KSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 876
            GF     E+ F K    NE L+  +R  LG+      A + ++F  +D   + ++++  FFEY  ++ S ++++A                                 F ++++NY +  H +LVRFA+D+    G       +V+  V  +        S  +   D L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:    9 GFATRAREKAFNKSLHLNETLLQTLRG-LGLDHKHLFA-LYQIFSAMDKDKSGEINLMEFFEYIDLKRSRFSEKAXXXXXXXXXXXX-----------------XXXXFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKLDAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 214
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BLAST of Ec-00_001690.2 vs. uniprot
Match: A0A6A3ZBF7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZBF7_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.710e-6
Identity = 58/225 (25.78%), Postives = 102/225 (45.33%), Query Frame = 1 
Query:  229 GFRRALYEQLFLK----NEPLVVLVRNMLGIKGDGDVARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSE----KSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 876
            GF     E+ F K    NE L+  +R  LG+      A + ++F  +D   + ++++  FFEY  ++ S ++++A                                 F ++++NY +  H +LVRFA+D+    G       +V+  V  +        S  +   D L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:    9 GFATRAREKAFNKSLHLNETLLQTLRG-LGLDHKHLFA-LYQIFSAMDKDKSGEINLMEFFEYIDLKRSRFSEKAXXXXXXXXXXXX-----------------XXXXFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKLDAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 214
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BLAST of Ec-00_001690.2 vs. uniprot
Match: G4ZDA4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDA4_PHYSP)

HSP 1 Score: 58.5 bits (140), Expect = 7.100e-6
Identity = 45/157 (28.66%), Postives = 79/157 (50.32%), Query Frame = 1 
Query:  421 SEYNKRAFRLLAFGDEQEDRTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSE----KSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 876
            S ++++AF ++       DR G          S  + F +F ++++NY +  H +LVRFA+D+    G       +V+  V  +        S  +   + L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:   20 SRFSEKAFSVM-------DRNG----------SGEVDFIEFVLAVWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREIWGSAWETSSSAQKIVEKLDAIMANTPNNRLSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 159
The following BLAST results are available for this feature:
BLAST of Ec-00_001690.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LEC1_ECTSI6.720e-16799.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZE72_9STRA1.380e-2433.58EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5K884_9PHAE1.080e-885.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0BXL7_PARTE4.190e-721.74Uncharacterized protein n=1 Tax=Paramecium tetraur... [more]
A0A225WT84_9STRA2.420e-633.57EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
A0A6A3MZN3_9STRA2.800e-625.78Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3ZBF7_9STRA4.710e-625.78Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
G4ZDA4_PHYSP7.100e-628.66Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1913566..1920793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score105.5
Seed ortholog evalue7.3e-20
Seed eggNOG ortholog44056.XP_009039936.1
Length2403
KEGG koko:K12879,ko:K13754,ko:K17582
KEGG TC2.A.19.4.4
KEGG Pathwayko03013,ko03040,map03013,map03040
KEGG ModuleM00405,M00406
Hectar predicted targeting categoryother localisation
Gene idEc-00_001690.2
EggNOG free text desc.calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential
EggNOG OGsCOG0530@1,KOG2399@2759,KOG4475@1,KOG4475@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko02000,ko03019,ko03041
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690Ec-00_001690Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1913566..1920793 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690.2.11Ec-00_001690.2.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1913566..1914436 -
Ec-00_001690.2.10Ec-00_001690.2.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1914769..1914921 -
Ec-00_001690.2.9Ec-00_001690.2.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1915323..1915513 -
Ec-00_001690.2.8Ec-00_001690.2.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1916054..1916204 -
Ec-00_001690.2.7Ec-00_001690.2.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1917095..1917206 -
Ec-00_001690.2.6Ec-00_001690.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1918082..1918170 -
Ec-00_001690.2.5Ec-00_001690.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1918418..1918686 -
Ec-00_001690.2.4Ec-00_001690.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1919066..1919159 -
Ec-00_001690.2.3Ec-00_001690.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1919556..1919762 -
Ec-00_001690.2.2Ec-00_001690.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1920334..1920491 -
Ec-00_001690.2.1Ec-00_001690.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1920686..1920793 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0016903UTR:Ec-00_001690.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1913566..1914268 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690.2CDS:Ec-00_001690.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1914269..1914436 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0016905UTR:Ec-00_001690.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1920421..1920491 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001690.2Ec-00_001690.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1914269..1920420 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001690.2 ID=Ec-00_001690.2|Name=Ec-00_001690.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=507bp
MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDV
ARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQED
RTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKE
FCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEER
RLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKL
RTEHDGLRNQGDVGGKRGASNKTPAGIVAGGPAAEEGGTEEPGLHPTKPG
AEGNGAYGAEGKGEGESGRGTGGTSSSSGSGSGSGSEEEKTADQAQQLQP
EGRRVSIAASKAGARRVSYADDRAPRGSLSGEGHWESQEGDGRRRSSALK
GNRAPGRRRSTKVSIADAGENMGRRRSSVAIASISDQGTAGRKGSMFEGM
QVYAPAETSAAINDTSSRRRSTRKGSTSRVTPGHAPPSEFADGLHLHPEL
EHHNEE*
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spliced messenger RNA

>Ec-00_001690.2 ID=Ec-00_001690.2|Name=Ec-00_001690.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2403bp|location=Sequence derived from alignment at chr_00:1913566..1920793- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CACGACGTGATATCCTTTGAAATTTGGTGCTCTCATAGGTGAGCTCCAGC
CAGTGGTGGGGCGAGCCCAGCCAACCCCGATAGCTCCGAAGTGAAGAGTG
AAAACAAGTGGGCAGGTGTGTGGGGCCATTCGACTCAGAACGTGGGCATT
CCCTCTGTCTGTCAGAAAACGTCGCCTGGATGGCAGAGGATGCGGCTTCA
TGCCGGGGCTGCATATTTCGATGGAGGTTTGGCTTCCGAAGGGCTCTGTA
CGAGCAACTGTTCTTGAAGAACGAGCCTCTGGTGGTGCTCGTGCGAAATA
TGTTAGGCATCAAGGGCGACGGAGACGTGGCGCGAGTCATGCGCGTCTTC
CTAGACGTCGACCTGCGGGGAACACACAAGTTGGACATCGAGACCTTCTT
CGAGTACTTCGGCATCGAGTTCTCCGAGTACAACAAGCGAGCCTTTCGAC
TCCTAGCCTTCGGAGACGAACAGGAAGACCGAACAGGACGTAGAGGGTCT
TCAAGCAGCAAACGCTCGAGCCTCTCGCTCAAGTTCGATCAGTTTTTTGT
CAGCATGTACAACTACGGCACACTGCTCCACGAAGCCCTGGTGCGCTTCG
CGTTCGATGTGATGGCGTCGGGGAAGGAGTTCTGCAACAGGCAGGACGTG
ATTGGGCTGGTGTCGCTGCTTCACTCGGAGAAGTCCCGCGTCAGGAACAC
CACCGACACCCTCATGGGCATCATGGACCCTCATAACCGGGACAAGGTTT
CCTTCGAGACGTTCAGGAAGGAGGAACGGAGGCTGGGTTCAATGCTCTTC
CCCGCCTTCAAGCTGCAGAAGACCCTCCGTGCTAAGGTTCTGGGGCAGCG
GTTTTGGCGCAAAGCTACGAAGAGGCGTCGGAAGGCTCGCATGGTTGGAG
CCGATCTCTGTCGAGAATACACCAAGCTCAGAACCGAGCATGATGGCCTC
CGAAACCAGGGCGATGTAGGAGGGAAGCGGGGAGCAAGCAACAAAACCCC
CGCCGGTATTGTTGCAGGGGGACCCGCGGCGGAAGAGGGTGGGACGGAGG
AGCCGGGCCTCCACCCGACGAAACCGGGTGCCGAGGGCAACGGTGCGTAT
GGGGCTGAAGGAAAGGGAGAAGGGGAGAGCGGGAGGGGGACAGGCGGAAC
TAGCAGCTCCAGCGGCAGCGGCTCTGGTAGTGGTAGCGAGGAAGAAAAAA
CCGCCGATCAGGCCCAGCAGCTGCAGCCAGAGGGCAGACGAGTGTCGATA
GCGGCGAGCAAAGCGGGGGCTCGGAGAGTGTCATACGCCGACGATCGCGC
TCCGCGGGGCTCTTTGTCGGGAGAGGGACATTGGGAAAGCCAAGAGGGCG
ACGGGCGACGGCGTTCCTCAGCGCTGAAGGGAAACCGAGCGCCAGGCCGG
AGACGCTCAACCAAGGTGAGCATTGCGGACGCAGGCGAAAATATGGGAAG
GCGAAGATCTTCCGTGGCAATTGCTTCCATTTCTGACCAGGGGACCGCGG
GCCGGAAAGGGTCAATGTTCGAGGGCATGCAGGTGTATGCTCCAGCAGAA
ACGTCCGCCGCCATAAATGACACATCGAGCCGCCGCCGATCTACGCGAAA
GGGGTCAACTTCCCGGGTAACGCCGGGCCATGCACCTCCGAGCGAATTCG
CGGATGGACTGCATCTCCATCCAGAGCTTGAGCACCACAACGAAGAATGA
CAGCGTGTCTCCTTGTACTCATAAGTCAAAGACACAGCGAGAACATGCGA
TCCCTAGAGGAATATATCGTGTATCAGAATGCGGTGAGAGCTCCAGTGCG
GGACGTGGACTTGCCCGAAAGGTCGGCGGGGGAAGGGAACCAACAGATAA
TGTTACGACATGTCTATGTCGCAAGCCCGAAGGGAGTAGAACCCACAGGG
CGGGGAATATGTGAAGTATTGCTGCACAATTACACTCACCCGGTCATCGA
AAGGCTCAGGTACTCATTGTAAGCAAAATCTTTTTGGATTGGTCGCATAT
TTTGATGCTTCGAACGCATTGGTCCTTTTTCCACCTGGGCGTTTGCCTGA
GAATAGAACCTTGTCGGCTTCCCAGCACGCTGATCCCCGTCCACTGAGGA
TGGAGCGAATAACACCACAGGGCTATTCACGTTCGGAACGTGCTTCATTC
CACCACAACGCCTTTACGCTGTTGAGTGCACCACTCTGCAGCGTGCCCGT
ACAACACAGCTACCCGCCTCCCCAAGTGAACCTGGCGCTATGATATCGAC
TCGGCGGATGTCTCCACGATGGCGGGTGCACGTTGTATGAGGCATGCTTG
GTTCCTGGCGATGATCTCCTCGAATCGCAGCTTGTCCACTTTTGAGACGC
ATCGCAAAACGAGACACCTGCGGTCAGGTTGAAGGAAAAAGCGGTTAGGC
CGG
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protein sequence of Ec-00_001690.2

>Ec-00_001690.2 ID=Ec-00_001690.2|Name=Ec-00_001690.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=507bp
MAEDAASCRGCIFRWRFGFRRALYEQLFLKNEPLVVLVRNMLGIKGDGDV
ARVMRVFLDVDLRGTHKLDIETFFEYFGIEFSEYNKRAFRLLAFGDEQED
RTGRRGSSSSKRSSLSLKFDQFFVSMYNYGTLLHEALVRFAFDVMASGKE
FCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEER
RLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTKL
RTEHDGLRNQGDVGGKRGASNKTPAGIVAGGPAAEEGGTEEPGLHPTKPG
AEGNGAYGAEGKGEGESGRGTGGTSSSSGSGSGSGSEEEKTADQAQQLQP
EGRRVSIAASKAGARRVSYADDRAPRGSLSGEGHWESQEGDGRRRSSALK
GNRAPGRRRSTKVSIADAGENMGRRRSSVAIASISDQGTAGRKGSMFEGM
QVYAPAETSAAINDTSSRRRSTRKGSTSRVTPGHAPPSEFADGLHLHPEL
EHHNEE*
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mRNA from alignment at chr_00:1913566..1920793-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001690.2 ID=Ec-00_001690.2|Name=Ec-00_001690.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7228bp|location=Sequence derived from alignment at chr_00:1913566..1920793- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CACGACGTGATATCCTTTGAAATTTGGTGCTCTCATAGGTGAGCTCCAGC
CAGTGGTGGGGCGAGCCCAGCCAACCCCGATAGCTCCGAAGTGAAGAGTG
AAAACAAGGTAAAACCTCTTACAGTACAGCAAGCAGTGTCCGCATGTCGG
TCGTCGTCCTGGTGAAGCTTCGAAACACTGCTGTACGTAGGTAAGCCTTG
GGAGATCTACTACAACCGTATTAAGGTGTGTTCGGCAGTCACATCCTCCC
CGTCCCCCTCCCCACGGATTCCGCATTTCACTACATGAACATATGCATAC
AGTGGGCAGGTGTGTGGGGCCATTCGACTCAGAACGTGGGCATTCCCTCT
GTCTGTCAGAAAACGTCGCCTGGATGGCAGAGGATGCGGCTTCATGCCGG
GGCTGCATATTTCGATGGAGGTTTGGCTTCCGAAGGGCTCTGTACGAGCA
ACTGTTCTTGGTGAGCATATGAGTCGTCTCGAATTATACCCGTGCCAATG
GCGATTACAGCAGTAGTTGCGGGACATATCGAGAACCGCTTAGAACCTGT
TCATGTATGACGACTATACAGATGTACCATGCATGTGTATACTATCATGT
ATGCACATGAACATATCGTGGACGAAGCCTGCAACTGTACGGCGAAAGCA
CGACTCCTGCAGGTGCGATTTTTTAGAGCACATTACGGTTGCCAACTGTA
TTCATTCGATACTCAAAATGCCCCGTCTTGGGAAGCGGGAATGTACAATG
TGATGTGAGATTCCCGTCTTCGACGTTTGCAATGTTTTAGTTGGTTCCCA
ACAGCGTGTTCACAGCGCCACCGGTACGTCACCGATATACACCAAGCATG
GCTTCCAGCCTTTTCTTGTAGACGTATTGTCGACATGGCCCTCATTAGGA
TGTCAATCCTTCCTCTCGTTGACGGCTAGCCTATAGAGTGCAGCGAAATT
CCACGCAGGACACCGCACACAGTTGCCGTCAATGGACTACCCCGCTCGCG
CGATATTCGATGATTTTCGCAACGATCGCAGAAGAACGAGCCTCTGGTGG
TGCTCGTGCGAAATATGTTAGGCATCAAGGGCGACGGAGACGTGGCGCGA
GTCATGCGCGTCTTCCTAGACGTCGACCTGCGGGGAACACACAAGTTGGA
CATCGAGACCTTCTTCGAGTACTTCGGCATCGAGTTCTCCGAGTACAACA
AGCGAGCCTTTCGACTCCTAGCCTTCGGAGACGAACAGGTGTGAGACAAG
CTTAACCCGAGTGTTCAGTCGAAACTGACCTTCACCCACAGGCATTCTGT
TGCAATGCGACAGCACGCCACCCGCCACACACCGCAACAGGTGGTGTACA
TCAGCCGGATGGTTCGCAGCATCTGTTTGTTGATGCTAGCCTGCATCACC
CTTCCTGGGGACAAACATGTCCTACAAAGAAAGATACTTCTCATGCTGCT
GCCTCGCTTCTCATGTAGTAAGATAGACCCGTGTGCACAGGATCCAAGGA
CAACGTGTTGCAGGATGCACACGCCGAGTGAGTCTACCACATACTTGTAC
TTGGATTCCATTTGTTGTGTGCGGCCAGCTTTTCAATTATTTCCGCGTCC
CGTTCCCACTGCGCCTTCGACTTGTCGTTCGTAGGAAGACCGAACAGGAC
GTAGAGGGTCTTCAAGCAGCAAACGCTCGAGCCTCTCGCTCAAGTTCGAT
CAGTTTTTTGTCAGCATGTACAACTACGGTGAGTAAGGGTCACGCAGACG
ACTTTGTGCAGTGGGATGAAGTCTGCACACGTGTAGCACGAACGCCATCC
ATGTGTCGAAAAGGGATGGTCCGTCGTGTTAGGAGTCCGAGCCCCCGATT
CGGGGCATGAATGGCGGGGCGGGTAGCACCTCGTAGCCTTTCGGGCCGAT
CAGAGGGGATACCTGTCACATCACCAAGGACGTACGTGCGTGTGAATTTC
ACTCTTCGGGAACGGGAGATTGCTCCTGGTGCTACCGCTACTGCCATTCC
ATTTGTGCACACACTTGTCCAAACCCCACCTAATCCCTTCTTGTCAACCC
TCGTCGTTCGGTGGAAACAATTCACCCTGTGCACCGCGGCGGTCGGTTGC
GACTCAGGCACACTGCTCCACGAAGCCCTGGTGCGCTTCGCGTTCGATGT
GATGGCGTCGGGGAAGGAGTTCTGCAACAGGCAGGACGTGATTGGGCTGG
TGTCGCTGCTTCACTCGGAGAAGTCCCGCGTCAGGAACACCACCGACACC
CTCATGGGCATCATGGACCCTCATAACCGGGACAAGGTTTCCTTCGAGAC
GTTCAGGAAGGAGGAACGGAGGCTGGGTTCAATGCTCTTCCCCGCCTTCA
AGCTGCAGAAGACCCTCCGTGCTAAGGTGTACGCCTGCTGTTGTTAGTTT
TGTGTGGGGCCCCCGTTGACATCATGCCCTCTACAATTATCGCATGAGAC
CGTATTTGAGGGACACCCTATTCCATGCATGGCACATGAACGCACGGGAA
AACACGGGCCTCGACGATCTTCGGAACAGCTGGTCAGCCCACACCCATAG
AGAGTGGCCAGACTGCACAATGATGCGTGCGCTATGTGTGAGCTCAACGC
GTTCTTTCCCCACGGGGTAGCAGGTTCTGGGGCAGCGGTTTTGGCGCAAA
GCTACGAAGAGGCGTCGGAAGGCTCGCATGGTTGGAGCCGATCTCTGTCG
AGAATACACCAAGTGAGTGTTGCCTGCTGATCAGCCCTTTCGACACCCCG
ACACCTGACATTCGCCCTGAGCGTCAACCCTTCGAGCCGATGGGTACAAC
CCTATTGCGAAGAGCTGTCAGTCTTTCAGAACGGTCATCAGCGAACACAA
TGCCCGGCTTTGTGTTTGTACGGATAGAATTACCCAAAGTGACCGAGTCA
TCGCGCATCTCGTTAGATGGCTTTCGTCTTTCGCCGATACTCTCTTGTTT
TTGCCTTTTGTGTGCCGGGCTGCACCCATTAAACGGTGATTTTCAGTCCC
CCTTGTCATGAGCATACAAACGACCTCTTCCGAATCCATATGCGCCAACT
GCGTCTGCAAGGTGCTTGTAACTACCCGGAACATGCCGGTTATGCTATTA
GTTTTTCCACGAAAGATGCACGGTGCCACAACCAAGCACGGTGTCATTGG
AACCATGCGACGGAGAGTAGAGTGTAGATGCAAGGCTCGTTGTTCAACTT
CCCCCCCACTTTTCATATTTATTGTTCGACGAGACCATGCGCCCCGTGGC
GGAGGGGGGGGCAGTATTCGCCGTTGCCCCTGGTACATAGCGTATATGAG
CCAAACCAACACGATCGTGGCATTTTTACTCAAGTCGCTGAGGTTCAATT
TGTTTCGCTTCTCCGCCTTTTTGACCCCGAAGCTCTCCCTTTCGAACTCT
AGCGACAAGACGTCCCGCGTACACGTCACTTCCACTGTTTTCGAGATCTT
GAGTTCCGGAACGAGGCAGGCGGGTTCCGTGTACGGGACATTTTGCGGGA
AGGACAACAACATGGTATGAGCAAAACCACACCAACGCGTGCATTGAATG
CCGCGTCCACGGTGAACGCAAAATATCTGTCCCACAGGCTCAGAACCGAG
CATGATGGCCTCCGAAACCAGGGCGATGTAGGAGGGAAGCGGGGAGCAAG
CAACAAAACCCCCGCCGGTATTGTTGCAGGGGGACCCGCGGCGGAAGAGG
TACCGATTGAGCAGCTCCAAGCCTTACCAGTCGTGAAACGCTCAAACACT
TCTGCCGTGTCAATTGCAATAACCCATGGCGCCTTGTGGTTCGCGGACTG
GGTTTCTCTGTCGGGCCCACAAGGGGGGACTGGTATGCCGAGTTGCGTCA
CGGGCTACCCCCCCCCCCCCCTCTGTTTCTACCGGTGCCCCCTCTGGGTC
GATAAAGACACCTGGCATGTTCAAAATATTGAAAGCTCTGTGACAACCGG
GTCGCAATGTTGTCCTCTGGGCGAAATGAGTGTTTTTTTTTTCCCGCTAC
ATCTATTCTGGACGTCCGTCAACACCGACCTTTGGTGAATGCTTAAGAAG
CAGCATCTGGAGTCTCACATAACAAACTCTCCACGTTTCCTCCAGCGGTG
TTTGCCTTCAAATCCTTAACTCGAAAAGTGTTCGTTAGTCCCTTCTCTCA
TTATTCTGACAGTTCGATTCGGAGTTTCCGATCCATGGCTTGGCGTTGTG
TCTGTGGTGATGGGTGTTCGGCTGGGTTGCGAAAGTAGGCGTGGTTCTTC
GCTTTCGAGGAGCATTGGTGCCACCTCTGTGACAGAAGAATGCCGCGCTA
CACCATCTATCAGCCACTATCGTACCCTGCACGAATGAGCTATTGACAGC
AAATCGTAACGACCCGCCGGTCCACCCTTGCCGCGCACCCAACACCAACC
AATCGTGTCGAGCCGTCCGTAGCACCCTCACTGCCCGAGTGGCTCCTCAA
TCGAAACAGCGACTCGCGGAAGACATAAATCTCCATCCGGTGTCCTCAAG
GCCACCACTGGCAACAACATTTCTCTCCTGCCCCATACACCCGCGGTGTA
TCGGCTGCCCCCCTGTCGCCGTCGGATATTGTCGTGTAGGGTGGGACGGA
GGAGCCGGGCCTCCACCCGACGAAACCGGGTGCCGAGGGCAACGGTGCGT
ATGGGGCTGAAGGAAAGGGAGAAGGGGAGAGCGGGAGGGGGACAGGCGGA
ACTAGCAGCTCCAGCGGCAGCGGCTCTGGTAGTGGTAGCGGTGAGTTGTT
TGCAACAGGTCCGTGGGGTGGCTCGATTCTCAGCCAACGGAATTGTATCA
ACGTGATCCAAATTATCCAACCACAGGAACACCAATGGCAACAGCGCCAA
TACTTGTGGAACTATACTACAGTAGTTGTTCATTGAAATTCATCGATAAA
CGAAGAACCCGCGGCGTTGTCAGAGGTATGGGGGCGAAAGATACCAAGGG
GCGTTCTACGAAGTTTAAGTGTTGGGTACTGCCGGCGTTATATAGGCGTT
GGGCCAGGGAGGTTGTAAAAGGTGTTCTCATGGTGAGGAACGTTCTCGAA
AGGACGCGATTGCACACTAACCTGGTGTCGGCGTAAGCGATTGGGATTTG
TTGGGGACGTTCTTATGAAACGGGAACCGACGGTTCGGTGGGTCCTCGGC
AAGGTTGTGATCGTTTGGTGTTTCTTCATTTCCCTTCCTTCCCGCCCCAC
GCACCCTCCCGTTCTCTTCTTTTCCCGACTCCACACACACTATCGCGCCA
CCGCTCCTCCTACAACAATGCACCGCTCAGAGGAAGAAAAAACCGCCGAT
CAGGCCCAGCAGCTGCAGCCAGAGGGCAGACGAGTGTCGATAGCGGCGAG
CAAAGCGGGGGCTCGGAGAGTGTCATACGCCGACGATCGCGCTCCGCGGG
GCTCTTTGTCGGGAGAGGGACATTGGGAAAGCCAAGAGGGCGACGGGCGA
CGGCGTTCCTCAGCGCTGAAGGTGCGCTGGTCTTACCTTAGGGCAGGCCG
TGGAAGAGTAGCGGGGTGCTTTTGGGGGGCTCTTCCTCTCCTCTTGGCAG
AAATCGCGGCAATAATCTACGATAGAACCCACGCTTCTATCAGGCGGGGT
CTTGCGACCCTATTTCTGTCCTTTTCTGCTTCGAGTTCAGACTTATTTCT
TGCATTCATATTTTTTTTGCTCTGATGAGATCAACTCGCTTCGAACAAGC
TGGCACCCCTTCAACACCAGAACACGCTATTTTTTTCTCCGTGCGGCCAG
TTCGTCGAGGTTTAGGACACCACACTCAGCCATCTGTCAGTTGCTGCCGC
CAGTGCCTTCTCGTTGGCTGAACTTCAACGTGATCGACCTATTAGGCTAC
TTCTCTCTTGGAATCCTTCCAGGGAAACCGAGCGCCAGGCCGGAGACGCT
CAACCAAGGTGAGCATTGCGGACGCAGGCGAAAATATGGGAAGGCGAAGA
TCTTCCGTGGCAATTGCTTCCATTTCTGACCAGGGGACCGCGGGCCGGAA
AGGGTCAATGTTCGAGGGCATGCAGGTTTGGCTGTAGTCTGTGCGTGGAT
CGCTTCCTCTTGCGTTTTTTGTTGTTTGTTTTTTACTGTTCGGGGGCGGT
TGGTTCCTTTCCAAGGATTGGCTGAACGTCGACTGGTGCGACGGCAGCAG
AAGACCGCGAATTCACAGAAAAGTTCGAGGCTGATGATGAAATCTACACG
CCATGGGCCATGAATGGAATTACATTGGCGAAACACTGGCTGGACAACCA
ACCGAGCCCGTATGGTGGAGACCAAACCTCTGCTATTTAGTGGCGGCTGA
GTCGCTTCTATCGTGTTAACCTGTGTGTATCTACACTCTTTCAACACGTC
CTGCCAGGTGTATGCTCCAGCAGAAACGTCCGCCGCCATAAATGACACAT
CGAGCCGCCGCCGATCTACGCGAAAGGGGTCAACTTCCCGGGTAACGCCG
GGCCATGCACCTCCGAGCGAATTCGCGGATGGACTGCATCTCCATCCAGA
GCTTGAGCACCACAACGAAGAATGACAGCGTGTCTCCTTGTACTCATAAG
TCAAAGACACAGCGAGAACATGCGATCCCTAGAGGAATATATCGTGTATC
AGAATGCGGTGAGAGCTCCAGTGCGGGACGTGGACTTGCCCGAAAGGTCG
GCGGGGGAAGGGAACCAACAGATAATGTTACGACATGTCTATGTCGCAAG
CCCGAAGGGAGTAGAACCCACAGGGCGGGGAATATGTGAAGTATTGCTGC
ACAATTACACTCACCCGGTCATCGAAAGGCTCAGGTACTCATTGTAAGCA
AAATCTTTTTGGATTGGTCGCATATTTTGATGCTTCGAACGCATTGGTCC
TTTTTCCACCTGGGCGTTTGCCTGAGAATAGAACCTTGTCGGCTTCCCAG
CACGCTGATCCCCGTCCACTGAGGATGGAGCGAATAACACCACAGGGCTA
TTCACGTTCGGAACGTGCTTCATTCCACCACAACGCCTTTACGCTGTTGA
GTGCACCACTCTGCAGCGTGCCCGTACAACACAGCTACCCGCCTCCCCAA
GTGAACCTGGCGCTATGATATCGACTCGGCGGATGTCTCCACGATGGCGG
GTGCACGTTGTATGAGGCATGCTTGGTTCCTGGCGATGATCTCCTCGAAT
CGCAGCTTGTCCACTTTTGAGACGCATCGCAAAACGAGACACCTGCGGTC
AGGTTGAAGGAAAAAGCGGTTAGGCCGG
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Coding sequence (CDS) from alignment at chr_00:1913566..1920793-

>Ec-00_001690.2 ID=Ec-00_001690.2|Name=Ec-00_001690.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1521bp|location=Sequence derived from alignment at chr_00:1913566..1920793- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCAGAGGATGCGGCTTCATGCCGGGGCTGCATATTTCGATGGAGGTT
TGGCTTCCGAAGGGCTCTGTACGAGCAACTGTTCTTGAAGAACGAGCCTC
TGGTGGTGCTCGTGCGAAATATGTTAGGCATCAAGGGCGACGGAGACGTG
GCGCGAGTCATGCGCGTCTTCCTAGACGTCGACCTGCGGGGAACACACAA
GTTGGACATCGAGACCTTCTTCGAGTACTTCGGCATCGAGTTCTCCGAGT
ACAACAAGCGAGCCTTTCGACTCCTAGCCTTCGGAGACGAACAGGAAGAC
CGAACAGGACGTAGAGGGTCTTCAAGCAGCAAACGCTCGAGCCTCTCGCT
CAAGTTCGATCAGTTTTTTGTCAGCATGTACAACTACGGCACACTGCTCC
ACGAAGCCCTGGTGCGCTTCGCGTTCGATGTGATGGCGTCGGGGAAGGAG
TTCTGCAACAGGCAGGACGTGATTGGGCTGGTGTCGCTGCTTCACTCGGA
GAAGTCCCGCGTCAGGAACACCACCGACACCCTCATGGGCATCATGGACC
CTCATAACCGGGACAAGGTTTCCTTCGAGACGTTCAGGAAGGAGGAACGG
AGGCTGGGTTCAATGCTCTTCCCCGCCTTCAAGCTGCAGAAGACCCTCCG
TGCTAAGGTTCTGGGGCAGCGGTTTTGGCGCAAAGCTACGAAGAGGCGTC
GGAAGGCTCGCATGGTTGGAGCCGATCTCTGTCGAGAATACACCAAGCTC
AGAACCGAGCATGATGGCCTCCGAAACCAGGGCGATGTAGGAGGGAAGCG
GGGAGCAAGCAACAAAACCCCCGCCGGTATTGTTGCAGGGGGACCCGCGG
CGGAAGAGGGTGGGACGGAGGAGCCGGGCCTCCACCCGACGAAACCGGGT
GCCGAGGGCAACGGTGCGTATGGGGCTGAAGGAAAGGGAGAAGGGGAGAG
CGGGAGGGGGACAGGCGGAACTAGCAGCTCCAGCGGCAGCGGCTCTGGTA
GTGGTAGCGAGGAAGAAAAAACCGCCGATCAGGCCCAGCAGCTGCAGCCA
GAGGGCAGACGAGTGTCGATAGCGGCGAGCAAAGCGGGGGCTCGGAGAGT
GTCATACGCCGACGATCGCGCTCCGCGGGGCTCTTTGTCGGGAGAGGGAC
ATTGGGAAAGCCAAGAGGGCGACGGGCGACGGCGTTCCTCAGCGCTGAAG
GGAAACCGAGCGCCAGGCCGGAGACGCTCAACCAAGGTGAGCATTGCGGA
CGCAGGCGAAAATATGGGAAGGCGAAGATCTTCCGTGGCAATTGCTTCCA
TTTCTGACCAGGGGACCGCGGGCCGGAAAGGGTCAATGTTCGAGGGCATG
CAGGTGTATGCTCCAGCAGAAACGTCCGCCGCCATAAATGACACATCGAG
CCGCCGCCGATCTACGCGAAAGGGGTCAACTTCCCGGGTAACGCCGGGCC
ATGCACCTCCGAGCGAATTCGCGGATGGACTGCATCTCCATCCAGAGCTT
GAGCACCACAACGAAGAATGA
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Synonyms
The feature 'Ec-00_001690.2' has the following synonyms
Synonym
Esi0013_0137
Esi_0013_0137