Ec-00_001610.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_001610.1
Unique Name	Ec-00_001610.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	613

Homology

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BLAST of Ec-00_001610.1 vs. uniprot
Match: D8LEB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB4_ECTSI)

HSP 1 Score: 1190 bits (3079), Expect = 0.000e+0
Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 1

Query:    1 MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA 1836
            MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA
Sbjct:    1 MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA 612

[Close]

BLAST of Ec-00_001610.1 vs. uniprot
Match: A0A6H5KAW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW4_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 2.460e-40
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 1

Query:  130 QAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAV 345
            QAA+EDRLWKDLCHRRWRRVNVDVARPNNR CDGGG VIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAV
Sbjct:    4 QAAQEDRLWKDLCHRRWRRVNVDVARPNNRTCDGGGGVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAV 75

The following BLAST results are available for this feature:

BLAST of Ec-00_001610.1 vs. uniprot

BLAST of Ec-00_001610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LEB4_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAW4_9PHAE	2.460e-40	95.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1842526..1847927 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	1839
Hectar predicted targeting category	other localisation
Gene id	Ec-00_001610.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001610	Ec-00_001610	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 1842526..1847927 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001610.1	Ec-00_001610.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 1842526..1847927 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001610.1.1	Ec-00_001610.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1842526..1842657 +
Ec-00_001610.1.2	Ec-00_001610.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1843482..1843694 +
Ec-00_001610.1.3	Ec-00_001610.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1844331..1844384 +
Ec-00_001610.1.4	Ec-00_001610.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1844564..1844911 +
Ec-00_001610.1.5	Ec-00_001610.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1845248..1845373 +
Ec-00_001610.1.6	Ec-00_001610.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1845794..1845973 +
Ec-00_001610.1.7	Ec-00_001610.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1846554..1846804 +
Ec-00_001610.1.8	Ec-00_001610.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1847393..1847927 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001610.1	CDS:Ec-00_001610.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 1842526..1842657 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:1842526..1847927+
coding sequence from alignment at chr_00:1842526..1847927+

mRNA sequence

>Ec-00_001610.1 ID=Ec-00_001610.1|Name=Ec-00_001610.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=613bp
MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDR
LWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTN
RLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVC
SADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSGGGGGQNGGGGAAE
SIVESSSGAGGSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVH
KCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGC
PGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSL
GGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDA
RCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSR
ATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHS
QRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVP
GVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDR
EGAGVTSLFLAA*

spliced messenger RNA

>Ec-00_001610.1 ID=Ec-00_001610.1|Name=Ec-00_001610.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1839bp|location=Sequence derived from alignment at chr_00:1842526..1847927+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGATCGAAATGCCTGATGATGATGACCGTGGTGCAGCTCTCCTGAT
CTCAAGCGCAGCGCACTGGCTTGAGTTCCTCCCAGCTGAGGGCGTCGCTA
TGTGCTGTGGAGTTTGTGCAGGTTTAAAGCAGGCCGCGGAGGAGGACAGG
TTATGGAAGGACCTGTGTCACCGGAGATGGCGTCGGGTCAACGTCGACGT
TGCCCGCCCCAACAACAGGAAGTGTGACGGCGGCGGCAGCGTCATCGGGG
GGCATCAGGCTGCGTACGCGTCGCTCAACGGGTGGCGCGACCCAACGAAC
AGACTCAGGCGCACAATCCTATCCACTGCTCCGAACGATGCTGTGACCGG
ACGACGATTTACCCGAGGGGCTCAAGGGGTGGCCCCCGGAGGTGGACCTG
CGACGAACATCTCCGGCATGGACGTCGGCCCTTGTCGAGTCGTCGTTTGC
TCCGCCGACTTCGCCTGGTACTACAACGTGCGGCAAGGCTCGAACACGTC
GAGACAACGACGGCAGCAGCCCCGAGACGCAACCAGCGATAGTGCCAGTA
TTGACAGCGGTGGAGGCGGTGGCCAAAACGGCGGAGGGGGTGCCGCCGAA
TCAATCGTCGAGTCTTCGTCGGGCGCTGGGGGGTCATCTCGCACGCTACG
GGGTTTCCAGCTGCCGTCGTCTGGCGTTACGGAGGCGAGGTACTCGGGGG
ACGGAGAGCGATGCTTCTTCGGCACTGTCTCAGGCCACATCTTCGTCCAC
AAATGTGGTGGTGACGACGACGATAAGGATGGCGAGAGACACCGATCTTC
CGAGGCTGTCGAGCCTTGGACACCGACCCTGGCGCTCTCGAGTCCCACAG
GAAGCCCTGTTGCTGTAAGACAGGTGGTAGCGAGATTCGAGGGCGGGTGC
CCGGGGGGATCGCGGCTAGGAGTGTTGTGCCGACCCACTTTGGTATGGCA
GCCGAATCTAGAGGGATCGGGCGAGGGGGGCTACCTGTTCCTCGTCGACA
CCCAAGCGCAGGCGGTCACGCGGCAGATGAACCTGGGGGGTGGCAGTCTC
GGGGGATTGACATTCCCGACCATGGAGCGCGGGGGGGCGGCGGTAAGCAT
GGCCCCACTCTCCTCCGAAGGGATGCCTTTCGGCTCCAGTGGCAGCGGCG
AACTCTTCGCCGTCGGGTTCGCCGGGGGCACCGTCGCTGTTTTTGACGCC
CGGTGCCACGAGGGGGGCGGGATGGTGGGTGGGTTCACTACGAGGCATCG
GTGGCTGAAGCGGCTGCGAAGTGCCGGGCCATTGCTCATGAACTCGTACG
GGAGAACCAAGAACATCGAAACCTGGGACATGCGCAGGCTGCCGTCCCGG
GCTACGCACGAGCCCCCCCCCGGCTTGCCGTCACCCCGCCTGCGCGCCCC
GCCGTGCCTCGCCGACCTCGCGTGCCCGGCAAACTCGCCGGACTTTTGGG
TGGAGCCGCACGGCCTCTGCGTGGCAGTGCACGGGGCTCCCAGACACAGC
CAGCGTTTCGGCGCGAAGCATGCCTTCTGGCCTTGGCCTAGACAGACCGG
CGGCGTGGCAACGGTCTCTACAGATCCCAACGCGCCCGCGTGCTCGGCAA
GGGGTGATGGCGGAGGAGTTGAGATTCCTGGAAGGTGTGTCGTGGTTCCC
GGCGTGGTGAACGACTCGGGCTACCGGATGTGTCTGTCGACCGGGGTCAA
GTTTACCGACACGCACATGGCCACGGTGCTCGACTCTTCTCGGGTGTTGG
TCGATGAGATGGCGGTGATGCCGAGAGTCTCTCGCGGGTCCGGTGATCGC
GAGGGGGCAGGCGTGACATCACTGTTTCTCGCTGCTTGA

protein sequence of Ec-00_001610.1

>Ec-00_001610.1 ID=Ec-00_001610.1|Name=Ec-00_001610.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=613bp
MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDR
LWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTN
RLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVC
SADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSGGGGGQNGGGGAAE
SIVESSSGAGGSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVH
KCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGC
PGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSL
GGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDA
RCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSR
ATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHS
QRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVP
GVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDR
EGAGVTSLFLAA*

mRNA from alignment at chr_00:1842526..1847927+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_001610.1 ID=Ec-00_001610.1|Name=Ec-00_001610.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5402bp|location=Sequence derived from alignment at chr_00:1842526..1847927+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGATCGAAATGCCTGATGATGATGACCGTGGTGCAGCTCTCCTGAT
CTCAAGCGCAGCGCACTGGCTTGAGTTCCTCCCAGCTGAGGGCGTCGCTA
TGTGCTGTGGAGTTTGTGCAGGTTTAAAGCAGGTATGTCGACGTTGCTGT
CTCTGTTCTTTGCACGCTTTGAAATCATTCAGAGATGCATGGACAGGGCT
AGACAATGTGTAGATAGGGGCCATCATCATTACCACCCCGGCTCGTCACT
TACGTTTTCTTTGTCGAGTGTTTTCAACGGTTGAAACATGTGCCTCTCCA
CTACGGCTGTGCACTTCGGTCCGTGCACTTAGTACCGCGTGCCTGGACCC
AGTCGGGCAAAGAGGGGGTATACATCATCTGGCTGATACGCTGAAGCTAT
GACAATGAGATTGCTACAACTTTGACAGGAGGGCATGTGCCAGGAGTACG
ATAAGCATACGGGTTCGGGGGGCTACCTCGTTCATAGCGCCAGTGTTCCG
GTCCTGTGGAACCCTTCCTACTTATGTTGGTTTTACCACTTCGTGCTATG
CGTTAGTGTACCACTCTACTCCCCACAGGGCTGATTCTTGGGCACATGTC
CTCTCAGCCCCGGTAACCCCTAACCATGCAGCCCTCTGTCGTGTGGAAAT
TAAGTTCCAATACTTGGCGCGCTTCCCAGGAACTGAGATTTTCTCTCACG
CCACGCCCATACAGTATACAGTGAAGGGCAACTTGGTCTTGGATGCGCAA
AAACTGACTTGATTGCTGTAGACGAGGAAAAGGATCGTGAACGTTCTCGC
CGTATGTGACGATTCGACTAGGACAAGCGCCGCCGAAGGAAGATGGCAAA
AATATGACTCGTGTGTGGCCTTCACCCTGGTGACCCCACCTGGTGGGTTT
AAACCATGCCAAACGTGTAACAACTGACGACACCACCCATCGGAATGCCG
ACACAGGCCGCGGAGGAGGACAGGTTATGGAAGGACCTGTGTCACCGGAG
ATGGCGTCGGGTCAACGTCGACGTTGCCCGCCCCAACAACAGGAAGTGTG
ACGGCGGCGGCAGCGTCATCGGGGGGCATCAGGCTGCGTACGCGTCGCTC
AACGGGTGGCGCGACCCAACGAACAGACTCAGGCGCACAATCCTATCCAC
TGCTCCGAACGATGCTGTGGTAAGTATGTCTTCGGGGAAAGGAGTAGGGA
CGCGGGCCGCACACGGGTGATTTTCCAAGGAGAGAAGGGAGAAGGAGACT
CCGTTGGGAGCGGATGGCATCGTTTTTTAAGTGGAAGCCCTCGAGATGCT
GGCCAATAAGGACACCACGGACTGGCACTTGTCGAGGGCGATGCGCCCAC
TCTTGTGCCGGCAAGCGACCATGCACACAATCCAGCAAGAATCTGCTCCG
GCTGGTAGTCACACCACAGACTCCACCTGTCGAGGGTGCGGCGCTTTGCA
CTCTTGCGCCGCCAAGCGACCATGCACAAATCCAGTAAGAATCTCCGGTT
GGCAGTCAACGCTGGGCTTTTGGGGTGGTTGAATCAAGCCGTTGTTGGCC
GTGGCCAGTAAGGAAGCAGAAATGCGGTTTCCCTTCCCTCTGCCGTTCCT
CCTGTCAGAGATCTTTTTTTCAGAGTCCAACACTCTGTTTCGTTGCGATT
TTTCTCCGCCAATACCCGTTTCGGAGCGTTTCCCAAGTGAAGCAATCCAT
TGCCTCAGACTGAGTCAGTGGGTATTCCCGACCGTTCGACCCCTGCCGGC
CTCCACCGTGCCCCCCCCCCCCCCCCCCCCGTCCTCTTCCCTTTATGCCC
CAAAGACCGGACGACGATTTACCCGAGGGGCTCAAGGGGTGGCCCCCGGA
GGTGGACCTGTGAGTTTCGAGTTTTTCATGAAATCAAGAGCAGGCACACC
ACGCATGGGAGGTTTCCCGGCAAAAAACAATGAAGAGAGTTGAAGGAGTT
GTCATTCCTGGTGCGCTGTCGTTTGACACCGCCACCACCATCACAATGTA
GACGATTAACACGTTGAAGAACGGTCACGATGCGGCAGGCGACGAACATC
TCCGGCATGGACGTCGGCCCTTGTCGAGTCGTCGTTTGCTCCGCCGACTT
CGCCTGGTACTACAACGTGCGGCAAGGCTCGAACACGTCGAGACAACGAC
GGCAGCAGCCCCGAGACGCAACCAGCGATAGTGCCAGTATTGACAGCGGT
GGAGGCGGTGGCCAAAACGGCGGAGGGGGTGCCGCCGAATCAATCGTCGA
GTCTTCGTCGGGCGCTGGGGGGTCATCTCGCACGCTACGGGGTTTCCAGC
TGCCGTCGTCTGGCGTTACGGAGGCGAGGTACTCGGGGGACGGAGAGCGA
TGCTTCTTCGGCACTGTCTCAGGCCACATCTTCGTCGTGAGTGGGATCGG
GCCGGGTCTCCTGGTAGCTTGCTAACTTTTCTCAATTTATGTGGGCTATT
CTCCTGTTCATGCTGTTCTAAACGAATATGTGCATGTACATAATGTACCA
TCTGTCAGAGTATTGCACTGTCTGTTATTTTTCTGTTTTTTTTTGTGCCG
GTTATCGGCGTTTCGCGTTTACTGACACTCCTTTCGTTTGTTTTATCCTT
CCTTTTATTTTTTTCACTCCTTTTCTCTCGGACGTGTGCTTTTTCTTTGC
CACCTTCTTGCTCTCCTTGTTTCTCGATGTCTTGACGACGCTGTTTGCTT
ACCCCTACCTGGTATTCGCCAGCACAAATGTGGTGGTGACGACGACGATA
AGGATGGCGAGAGACACCGATCTTCCGAGGCTGTCGAGCCTTGGACACCG
ACCCTGGCGCTCTCGAGTCCCACAGGAAGCCCTGTTGCTGTAAGACAGGT
ATGGTCCTTTTCGTGACTTGGCTCTGGCTCGAATCGAATAGCATAGGTTC
ATTATTTCTCCGGACACAGTACTTGCGTACTTAGCTGAAGCGAAGAGTGC
AACAGGGGAGACTGAAGACATAGCCCTGAAGTTGCTGCGACGAAACGAAG
TACTATTGATACATTTTTTCCGTCTACATGTACGTCGGTAATAGCAACAG
CATATTTGCAGCAGCTACGATGTAGCTGCACCCTCCTTGATGTGGGTCGC
TTTGTATTGCAATCGTCGCTTCGCTTCCAAACAGTTTTGTGAAGATCTCT
TCCAAGCACGCCCCAATCCATGTGCTGCGTCCACGCTTGTCGGACGGCTG
TTTCATTCGCAAATCGACCCTTCAGAATACTCGCCATATGCCCGCTGCAT
GCTGCGTTCCCATGCCAGGTGGTAGCGAGATTCGAGGGCGGGTGCCCGGG
GGGATCGCGGCTAGGAGTGTTGTGCCGACCCACTTTGGTATGGCAGCCGA
ATCTAGAGGGATCGGGCGAGGGGGGCTACCTGTTCCTCGTCGACACCCAA
GCGCAGGCGGTCACGCGGCAGATGAACCTGGGGGGTGGCAGTCTCGGGGC
AAGTATGTAGGCACAACGGAGTTTGGATGCATATTTCTGTGAGCGTGTTT
GCTCCACTAACAGCATCGACCGTGCTACCCGACTGACCAACGAGGAAGGG
AAGGGAAGGGAAGGGAAGGGAAGGGAAATGCCGGGAAACTGTCCTCTGTG
TGTACATATGTAAGCGATTTCCGGAGAAGCTCGAGGGATCTCACGCACTC
TTGACCGGCTTTTCGCAGCTCGATTGTTCCAGCACCAAGAGGCTGCCAGT
GCCGAAGATGGCTGAGTTGAGAAGATCTCATACACTACTCGGTCGGGTTT
CCGGAGCATCCCTCTTGGTGGTGTTGAGGAGCAGTCGAGCTTTGAAAGTC
AATCCAGCAGATGTCCCGTCAATCCCACTTAGACGGTAATTGTTTCGCAC
GGCCGGGCCGGCGCTGACGGGATGATCACAGAAAATGATCTACTAGTCCC
GTTGGGGGTGAACCGAACACGCTATGTAGTCGATGTGTAATCGTGTTCTG
AGCGCATCGAGACGAAAGCTAGGCGCGCCATCTCCCCCACCCGCTCACCC
TAACTCCCTCCTCACGCGACCCCAACAGGGATTGACATTCCCGACCATGG
AGCGCGGGGGGGCGGCGGTAAGCATGGCCCCACTCTCCTCCGAAGGGATG
CCTTTCGGCTCCAGTGGCAGCGGCGAACTCTTCGCCGTCGGGTTCGCCGG
GGGCACCGTCGCTGTTTTTGACGCCCGGTGCCACGAGGGGGGCGGGATGG
TGGGTGGGTTCACTACGAGGCATCGGTGGCTGAAGCGGCTGCGAAGTGCC
GGGCCATTGCTCATGAACTCGTACGGGAGGTGAGGAAGAACGACAGGGAA
AACTCGCGCGTGGGGGGGGGCGGGGGCGAGTAGAACTGACGCTTCGGTCT
TGCTTTCGCCAAGGTATTGGTCAAGATCTCGAGTCTCGAGTGCATGCTAC
TGGCAGACGCATCACCCTAATTCCTCCCTCTATAGCTGGGGTTGCTCTCT
GCATGCGTGCCAGTGGTTGTGCTCACTCTCACTCACGGCTGTAGTGCGTA
GGTCGACGTATGATTGCAGAGGTTGGCGGATATTCTTATCTCAGCCGGTG
GCACTAGCTGAGGGCTTGGCCATCGTAGTACCGACGAGGCGTACAGCGAG
TGCTGTGGTGTCGCCCAGCAAATAGGAACGTTTTTGTTGGGTGCTTGCTG
CGACTGGGGCACGGTCGTCATATGCACTAGCGGCTGGCGTGTTTGCGCTG
TCCTTGCCAATTGGCAACCCTCAATCCGCTTGCACCTCTCCCCGCACGTC
CCTCATCCGCTGTTTTTGTCGCCTTAAACAGCCTTTGCTATTGCTGTGTC
CAACCCGTTCCCTTCAAACAGCCATTAAATCTCCATCAAAACCCTGGTCG
CGAACGTCTTTGTGCAGAACCAAGAACATCGAAACCTGGGACATGCGCAG
GCTGCCGTCCCGGGCTACGCACGAGCCCCCCCCCGGCTTGCCGTCACCCC
GCCTGCGCGCCCCGCCGTGCCTCGCCGACCTCGCGTGCCCGGCAAACTCG
CCGGACTTTTGGGTGGAGCCGCACGGCCTCTGCGTGGCAGTGCACGGGGC
TCCCAGACACAGCCAGCGTTTCGGCGCGAAGCATGCCTTCTGGCCTTGGC
CTAGACAGACCGGCGGCGTGGCAACGGTCTCTACAGATCCCAACGCGCCC
GCGTGCTCGGCAAGGGGTGATGGCGGAGGAGTTGAGATTCCTGGAAGGTG
TGTCGTGGTTCCCGGCGTGGTGAACGACTCGGGCTACCGGATGTGTCTGT
CGACCGGGGTCAAGTTTACCGACACGCACATGGCCACGGTGCTCGACTCT
TCTCGGGTGTTGGTCGATGAGATGGCGGTGATGCCGAGAGTCTCTCGCGG
GTCCGGTGATCGCGAGGGGGCAGGCGTGACATCACTGTTTCTCGCTGCTT
GA

Coding sequence (CDS) from alignment at chr_00:1842526..1847927+

>Ec-00_001610.1 ID=Ec-00_001610.1|Name=Ec-00_001610.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1839bp|location=Sequence derived from alignment at chr_00:1842526..1847927+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGATCGAAATGCCTGATGATGATGACCGTGGTGCAGCTCTCCTGAT
CTCAAGCGCAGCGCACTGGCTTGAGTTCCTCCCAGCTGAGGGCGTCGCTA
TGTGCTGTGGAGTTTGTGCAGGTTTAAAGCAGGCCGCGGAGGAGGACAGG
TTATGGAAGGACCTGTGTCACCGGAGATGGCGTCGGGTCAACGTCGACGT
TGCCCGCCCCAACAACAGGAAGTGTGACGGCGGCGGCAGCGTCATCGGGG
GGCATCAGGCTGCGTACGCGTCGCTCAACGGGTGGCGCGACCCAACGAAC
AGACTCAGGCGCACAATCCTATCCACTGCTCCGAACGATGCTGTGACCGG
ACGACGATTTACCCGAGGGGCTCAAGGGGTGGCCCCCGGAGGTGGACCTG
CGACGAACATCTCCGGCATGGACGTCGGCCCTTGTCGAGTCGTCGTTTGC
TCCGCCGACTTCGCCTGGTACTACAACGTGCGGCAAGGCTCGAACACGTC
GAGACAACGACGGCAGCAGCCCCGAGACGCAACCAGCGATAGTGCCAGTA
TTGACAGCGGTGGAGGCGGTGGCCAAAACGGCGGAGGGGGTGCCGCCGAA
TCAATCGTCGAGTCTTCGTCGGGCGCTGGGGGGTCATCTCGCACGCTACG
GGGTTTCCAGCTGCCGTCGTCTGGCGTTACGGAGGCGAGGTACTCGGGGG
ACGGAGAGCGATGCTTCTTCGGCACTGTCTCAGGCCACATCTTCGTCCAC
AAATGTGGTGGTGACGACGACGATAAGGATGGCGAGAGACACCGATCTTC
CGAGGCTGTCGAGCCTTGGACACCGACCCTGGCGCTCTCGAGTCCCACAG
GAAGCCCTGTTGCTGTAAGACAGGTGGTAGCGAGATTCGAGGGCGGGTGC
CCGGGGGGATCGCGGCTAGGAGTGTTGTGCCGACCCACTTTGGTATGGCA
GCCGAATCTAGAGGGATCGGGCGAGGGGGGCTACCTGTTCCTCGTCGACA
CCCAAGCGCAGGCGGTCACGCGGCAGATGAACCTGGGGGGTGGCAGTCTC
GGGGGATTGACATTCCCGACCATGGAGCGCGGGGGGGCGGCGGTAAGCAT
GGCCCCACTCTCCTCCGAAGGGATGCCTTTCGGCTCCAGTGGCAGCGGCG
AACTCTTCGCCGTCGGGTTCGCCGGGGGCACCGTCGCTGTTTTTGACGCC
CGGTGCCACGAGGGGGGCGGGATGGTGGGTGGGTTCACTACGAGGCATCG
GTGGCTGAAGCGGCTGCGAAGTGCCGGGCCATTGCTCATGAACTCGTACG
GGAGAACCAAGAACATCGAAACCTGGGACATGCGCAGGCTGCCGTCCCGG
GCTACGCACGAGCCCCCCCCCGGCTTGCCGTCACCCCGCCTGCGCGCCCC
GCCGTGCCTCGCCGACCTCGCGTGCCCGGCAAACTCGCCGGACTTTTGGG
TGGAGCCGCACGGCCTCTGCGTGGCAGTGCACGGGGCTCCCAGACACAGC
CAGCGTTTCGGCGCGAAGCATGCCTTCTGGCCTTGGCCTAGACAGACCGG
CGGCGTGGCAACGGTCTCTACAGATCCCAACGCGCCCGCGTGCTCGGCAA
GGGGTGATGGCGGAGGAGTTGAGATTCCTGGAAGGTGTGTCGTGGTTCCC
GGCGTGGTGAACGACTCGGGCTACCGGATGTGTCTGTCGACCGGGGTCAA
GTTTACCGACACGCACATGGCCACGGTGCTCGACTCTTCTCGGGTGTTGG
TCGATGAGATGGCGGTGATGCCGAGAGTCTCTCGCGGGTCCGGTGATCGC
GAGGGGGCAGGCGTGACATCACTGTTTCTCGCTGCTTGA

Synonyms

The feature 'Ec-00_001610.1' has the following synonyms


Synonym
Esi0013_0127
Esi_0013_0127