Ec-00_001550.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001550.1
Unique NameEc-00_001550.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length549
Homology
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: D8LEA9_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA9_ECTSI)

HSP 1 Score: 1070 bits (2767), Expect = 0.000e+0
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 2 
Query:   74 MMTAAFGDESASSMSLLPPIEGSGGDTGEDVDGNPREAARLLEEENPHHQPSYNGQRHEQQDVPGRQLMEDRWPSGQYSSLTTVPPGGASGGSPNVAWQDPNTTTSAGEGDSDGMVTPGQGQAGLAPLDEQPPPDPFAMERPPIANGGRGGGGAVGGEIRAKPPVAPRPARREWNLTTTKPSPKLSSTAVGATGAANGHISSDGKGVGVAGVGGGSVAGGGGVGLKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALDNRGPGADQQRLLSQGFRVG 1717
            MMTAAFGDESASSMSLLPPIEGSGGDTGEDVDGNPREAARLLEEENPHHQPSYNGQRHEQQDVPGRQLMEDRWPSGQYSSLTTVPPGGASGGSPNVAWQDPNTTTSAGEGDSDGMVTPGQGQAGLAPLDEQPPPDPFAMERPPIANGGRGGGGAVGGEIRAKPPVAPRPARREWNLTTTKPSPKLSSTAVGATGAANGHISSDGKGVGVAGVGGGSVAGGGGVGLKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALDNRGPGADQQRLLSQGFRVG
Sbjct:    1 MMTAAFGDESASSMSLLPPIEGSGGDTGEDVDGNPREAARLLEEENPHHQPSYNGQRHEQQDVPGRQLMEDRWPSGQYSSLTTVPPGGASGGSPNVAWQDPNTTTSAGEGDSDGMVTPGQGQAGLAPLDEQPPPDPFAMERPPIANGGRGGGGAVGGEIRAKPPVAPRPARREWNLTTTKPSPKLSSTAVGATGAANGHISSDGKGVGVAGVGGGSVAGGGGVGLKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALDNRGPGADQQRLLSQGFRVG 548
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A835Z286_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z286_9STRA)

HSP 1 Score: 360 bits (923), Expect = 7.830e-110
Identity = 189/354 (53.39%), Postives = 236/354 (66.67%), Query Frame = 2 
Query:  746 LKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDV---ERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKT----------------DEGV------------------------------WSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEG-VAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEAL 1657
            + PP+W+PDED  +C  C + FDWARR+HHCR CGGIFC +CS++++LLPRSFG+RDPQR+C+ CNA +A LQE L  ++SNAVK N V   E+  ++ YLN+P+ FTLGAEVRKAAY++ NF + G++QD SIP ELL+RAKGLAF+TV+K G    G  GTGLVIS+                 D                                 WSAPSAI T+GMGWGA IG  +TD VLVL T+AA+EAF     VS+GA + VA GP+GR+GAG V+++ E  VA   SYSHSRGLFAG+SLEG VI +RPDVNR FYGR +  + LL+G   PPPAA PLYEAL
Sbjct:   83 ITPPRWIPDEDVLACVKCNKAFDWARRKHHCRCCGGIFCASCSKYQSLLPRSFGTRDPQRVCKACNASLAHLQEHLQATLSNAVKANQVSKSEKPGLSPYLNKPLSFTLGAEVRKAAYSVLNFMRTGVVQDNSIPTELLARAKGLAFMTVLKAGCFWTGSFGTGLVISRLPAERCCHPSAASLSDGDSAAAPEQXXPLSVAAAAYGSSAQLMRRPPRRLEWSAPSAIGTVGMGWGAAIGANVTDVVLVLTTNAAVEAFCAT-NVSLGAGIGVAAGPIGRSGAGAVTISTESDVAPVLSYSHSRGLFAGISLEGAVIAARPDVNRAFYGRDIGAKQLLAGEAPPPPAAAPLYEAL 435
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A835YJX3_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX3_9STRA)

HSP 1 Score: 352 bits (904), Expect = 7.640e-109
Identity = 179/310 (57.74%), Postives = 218/310 (70.32%), Query Frame = 2 
Query:  740 VGLKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGT---VASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEG-VAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEAL 1657
             GL PP+W PD    +C  CGR FDWARR+HH               +ALLPRSFG+RDPQR+C  C   + PLQ  L  + SNAV+ N+V  G    ++ YLN+P+ FTLGAEVRKAAY++ NF + G++QD SIP ELL+ AKGLAF+TV+K G +  G  GTGLV        WSAPSAI T+GMGWGA IG  ITD VLVLNT AA+EAF G GQ+S+GA + +A GP+GR+GAG V++  +G VA   SYSHSRGLFAG+SLEG VI +RPDVNR FYG+ V+ + LLSG V PPPAA PLYEAL
Sbjct:    4 AGLAPPRWTPDAQAVNCHNCGRLFDWARRKHHXXXXXXXXXXXXXXXQALLPRSFGTRDPQRVCDECKTTLEPLQADLINTFSNAVRANEVANGAKRGLSPYLNKPLSFTLGAEVRKAAYSVFNFMRAGVVQDSSIPTELLTCAKGLAFITVLKAGVVWVGNFGTGLVQCHLLSTEWSAPSAIGTIGMGWGACIGANITDVVLVLNTAAAVEAFCGAGQMSLGAGIGMAAGPIGRSGAGGVTIGTDGDVAPVLSYSHSRGLFAGISLEGAVIAARPDVNRAFYGKDVTAKQLLSGEVDPPPAAAPLYEAL 313
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A485KLR6_9STRA (Aste57867_8862 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLR6_9STRA)

HSP 1 Score: 348 bits (894), Expect = 4.340e-106
Identity = 167/313 (53.35%), Postives = 222/313 (70.93%), Query Frame = 2 
Query:  758 KWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALD 1660
            +W+PDE+ S C  CG  FDW RR+HHCR CG +FC  C+  R+++              S  +  PQR+C+PC+  + P Q +L E+ SNAV+ N +       +LN P  FTL  EVRKAAY++ NF  +G+I+DQSIP  LL+ A+G+AFLTV+K GF+V GR+GTGLV+SK  +G WSAPSAI T G+GWGA +GGE+TDFV++LNT AA++ F  +GQV++GAEL VA GP+GR  AG++     G+A  YSYSHS+GLF G+SLEG VIV+RPDVNR+FYGR ++  +LLSG   PP AA PLY+AL+
Sbjct:   35 RWIPDEEVSLCKSCGLLFDWVRRKHHCRYCGQVFCDLCTTHRSMIREDKILTAPTKRYLSVSAYSPQRVCEPCHNVLMPDQAILRETASNAVQPNSINEAGSKRFLNSPYSFTLREEVRKAAYSVKNFMLDGLIKDQSIPLPLLTNAQGIAFLTVLKVGFVVTGRLGTGLVLSKLADGSWSAPSAIGTAGIGWGAQVGGEVTDFVIILNTRAAVDTFCAQGQVNLGAELGVAAGPLGRVAAGSMEAGPGGIAPCYSYSHSKGLFIGISLEGSVIVARPDVNREFYGRDITAAELLSGQERPPVAAMPLYDALE 347
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A067CDH3_SAPPC (FYVE-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDH3_SAPPC)

HSP 1 Score: 342 bits (878), Expect = 2.730e-104
Identity = 166/312 (53.21%), Postives = 221/312 (70.83%), Query Frame = 2 
Query:  758 KWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALL--------PR----SFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEAL 1657
            +W+PD + S C  CG  FDW RR+HHCR CG +FC  C+ FR+L+        P     S  + +PQR+C+PC   + P Q +L  + SNAV+ N +       +LN P  FTL  E+RKAAY++ NF  +G+I+DQSIP  LL+ AKG+AFLTV+K GF+V GRVGTGLVI+K  +G WSAPSAIAT G+GWGA IGG +TDFV++LNT +A++ F  +GQV++GAEL VA GP+GR  AG +     G+A  YSYSHS+GLF G+S+EG V+++RPDVN +FYG++V+  DLLSG   PP AA+PLY+AL
Sbjct:   23 RWIPDAEVSLCKACGLLFDWVRRKHHCRYCGHVFCDLCTTFRSLIRDDKILTSPEKRYLSVNAYNPQRVCEPCYTLLLPDQSLLCATASNAVQPNSISEAGSKRFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGPGGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGRERPPVAAQPLYDAL 334
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A1V9Z795_9STRA (FYVE-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z795_9STRA)

HSP 1 Score: 342 bits (876), Expect = 5.670e-104
Identity = 164/312 (52.56%), Postives = 219/312 (70.19%), Query Frame = 2 
Query:  758 KWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEAL 1657
            +W+PD + S C  CG  FDW RR+HHCR CG +FC  C+ FR+L+              S  + +PQR+C+PC   + P Q +L E+ SNAV+ N +       +LN P  FTL  E+RKAAY++ NF  +G+I+DQSIP  LL+ AKG+AFLTV+K GF+V GRVGTGLVI+K  +G WSAPSAIAT G+GWGA IGG +TDFV++LNT +A++ F  +GQV++GAEL VA GP+GR  AG +     G+A  YSYSHS+GLF G+S+EG ++V+RPDVN +FYG++V+   LLSG    P AA+PLY+AL
Sbjct:   21 RWIPDAEVSLCKACGLLFDWVRRKHHCRYCGHVFCDLCTNFRSLIREDKILTSPEKRYLSVNAYNPQRVCEPCYTILLPDQSLLCETSSNAVQPNSITEAGSKRFLNSPYSFTLREEIRKAAYSVKNFMYDGLIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGTWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGPGGIAPCYSYSHSKGLFIGISIEGSIVVARPDVNMEFYGKEVTAAQLLSGQERRPVAAQPLYDAL 332
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A5D6Y5S5_9STRA (FYVE-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S5_9STRA)

HSP 1 Score: 340 bits (872), Expect = 1.310e-103
Identity = 170/313 (54.31%), Postives = 219/313 (69.97%), Query Frame = 2 
Query:  758 KWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAE-GVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEAL 1657
            +W+PD + S C GC   FDW RR+HHCR CG +FC  C+  R+L+P             S  + +PQR+C  C   + P Q  L  ++SNAV+EN+++      +LN P  FTL  E+RKAAY++ NF  +G+I+DQSIP  LL+ AKG+AFLTVIK GF+  GRVGTGLVI++  +G WSAPSAIAT G+GWGA IGGEITDFV+VLNT  A++AF  +GQV++GAEL V+ GPVGR  AG V  +A+  VA  YSYSHS+GLF GLSLEG +I++RPD+NR FYGR V V +LL G   PP  A PLY+A+
Sbjct:   16 RWIPDAEVSLCFGCQLLFDWVRRKHHCRFCGHVFCDLCTPRRSLIPADQILANPERQYLSVNAHNPQRVCDDCFNALLPAQAELRGTMSNAVQENELDEAGAKRFLNSPYSFTLREEIRKAAYSVKNFMYQGVIKDQSIPLPLLTHAKGIAFLTVIKVGFVFTGRVGTGLVIARLPDGRWSAPSAIATAGVGWGAQIGGEITDFVIVLNTKRAVDAFCSKGQVNLGAELGVSAGPVGRVAAGAVEASADLAVAPCYSYSHSKGLFVGLSLEGSMILARPDINRAFYGRDVQVAELLGGMEPPPVGATPLYDAI 328
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A024UDI5_9STRA (FYVE-type domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UDI5_9STRA)

HSP 1 Score: 342 bits (876), Expect = 1.550e-103
Identity = 168/313 (53.67%), Postives = 219/313 (69.97%), Query Frame = 2 
Query:  758 KWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALD 1660
            +W+ D + S C  CG  FDW RR+HHCR CG +FC  C+  R+L+              S  +  PQR+C+PC+  + P Q +L E+ SNAV+ N +       + N P  FTL  EVRKAAY+I NF  EG+I+DQSIP  LL+ A+G+AFLTV+K GF+V GR+GTGLV+SK  +G WSAPSAIAT G+GWGA +GGE+TDFV++LNT AA++ F  +GQV++GAEL VA GPVGR  AG V     G+A  YSYSHS+GLF G+SLEG VI++RPDVNR+FYG+ V+  +LL G   PP AA+PLY+AL+
Sbjct:   36 RWISDAEVSLCKSCGLLFDWVRRKHHCRYCGQVFCDDCTPHRSLIHEDKILISPNKRYLSVNAFSPQRVCKPCHHILLPDQAILRETASNAVQPNSINETGSKRFFNSPYSFTLREEVRKAAYSIKNFMLEGVIKDQSIPLPLLTNAQGIAFLTVLKVGFVVTGRLGTGLVLSKLPDGSWSAPSAIATAGIGWGAQVGGEVTDFVMILNTRAAVDTFCAQGQVNLGAELGVAAGPVGRVAAGAVEAGPGGIAPCYSYSHSKGLFIGISLEGSVIMARPDVNREFYGKDVTAAELLGGRERPPVAAQPLYDALE 348
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A8K1C966_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C966_PYTOL)

HSP 1 Score: 341 bits (874), Expect = 3.300e-103
Identity = 174/313 (55.59%), Postives = 220/313 (70.29%), Query Frame = 2 
Query:  758 KWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALL---------PRSF---GSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAE-GVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEAL 1657
            +W+ D + S C GC   FDW RR+HHCR CG IFC  C+  R L+          R F    + +PQR+C  C   + P Q  L ES SNAV  N +       +LN P  FTL  E+RKAAY++ NF  +G+I+DQSIP  LL++AKG+AFLTVIK GF++ GRVGTGLVISK  +G WSAPSAI T G+GWGA IGGE+TDFV++LNT  A++AF+ +GQV++GAEL VA GP+GRT AG+V  +A+  +A  YSYSHS+GLFAG+SLEG VI++RPD+NR FYGR+V   +LL G  APP AA PLYEAL
Sbjct:   37 RWVMDAEVSVCYGCQLLFDWVRRKHHCRYCGRIFCEPCTSKRCLIREEQILQSPDRQFLAVNAHNPQRVCDECYVTLQPEQPTLRESTSNAVMANALNDNGPQRFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLAKAKGIAFLTVIKVGFVLTGRVGTGLVISKLPDGRWSAPSAIGTAGIGWGAQIGGELTDFVIILNTKRAVDAFTSKGQVNLGAELGVAAGPLGRTAAGSVEASADLDIAPCYSYSHSKGLFAGISLEGSVILTRPDINRAFYGREVQATELLGGMEAPPNAATPLYEAL 349
[Close]
BLAST of Ec-00_001550.1 vs. uniprot
Match: A0A6V1LWE2_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LWE2_HETAK)

HSP 1 Score: 341 bits (875), Expect = 1.010e-102
Identity = 170/318 (53.46%), Postives = 233/318 (73.27%), Query Frame = 2 
Query:  737 GVGLKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLAESVSNAVKENDVE-RGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKE---------GMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALD 1660
            GVG  P +W+PDE+ + C+ C   FDWA R+HHCR CG IFC +CS+ +ALLP+ F  RDP+R+C PC   + PLQ+ L  ++SN+++EN ++    +  +++ P   TLGA VRKAA+TI N +           G+++DQSIP E L RA+GLAFLTV K GF++AG+ GTGLV+++  +G W+APSAIAT+G+ WG LIGGEITD+V++LNT  A+EAFSGRGQV++GAEL  A+GPVGR   GN+++   GVA  Y+YSHS+GLF G+SLEG VI +R D+N+KFYG+ V   +LL+G V  P AA+PLY+AL+
Sbjct:  120 GVGALP-RWVPDEEVTHCTQCQVMFDWAVRKHHCRACGRIFCQSCSENKALLPKEFCDRDPKRVCDPCFRALQPLQDELVATMSNSIRENHIDPNSALERHVHNPFSTTLGACVRKAAHTILNMTDTHTTDHINGMGVVKDQSIPIEYLRRARGLAFLTVAKMGFVLAGKAGTGLVVARRPDGGWTAPSAIATVGVNWGLLIGGEITDYVILLNTQKAVEAFSGRGQVTLGAELGAALGPVGRNAGGNLALGDGGVAPTYTYSHSKGLFVGVSLEGTVIAARADMNQKFYGQPVLASNLLNGVVPNPRAAQPLYDALE 436
The following BLAST results are available for this feature:
BLAST of Ec-00_001550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA9_ECTSI0.000e+0100.00FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z286_9STRA7.830e-11053.39FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YJX3_9STRA7.640e-10957.74FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
A0A485KLR6_9STRA4.340e-10653.35Aste57867_8862 protein n=1 Tax=Aphanomyces stellat... [more]
A0A067CDH3_SAPPC2.730e-10453.21FYVE-type domain-containing protein n=2 Tax=Saprol... [more]
A0A1V9Z795_9STRA5.670e-10452.56FYVE-type domain-containing protein n=1 Tax=Achlya... [more]
A0A5D6Y5S5_9STRA1.310e-10354.31FYVE-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A024UDI5_9STRA1.550e-10353.67FYVE-type domain-containing protein n=3 Tax=Aphano... [more]
A0A8K1C966_PYTOL3.300e-10355.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6V1LWE2_HETAK1.010e-10253.46Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1776676..1785628 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1080.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LEA9
Length3417
KEGG koko:K20523
Hectar predicted targeting categoryother localisation
Gene idEc-00_001550.1
EggNOG free text desc.regulation of ruffle assembly
EggNOG OGsCOG2930@1,KOG1843@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001550Ec-00_001550Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1776676..1785628 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001550.1.1Ec-00_001550.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1776676..1776812 +
Ec-00_001550.1.2Ec-00_001550.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1777914..1778000 +
Ec-00_001550.1.3Ec-00_001550.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1778329..1778690 +
Ec-00_001550.1.4Ec-00_001550.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1779658..1779901 +
Ec-00_001550.1.5Ec-00_001550.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1780407..1780554 +
Ec-00_001550.1.6Ec-00_001550.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1781213..1781348 +
Ec-00_001550.1.7Ec-00_001550.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1781896..1781976 +
Ec-00_001550.1.8Ec-00_001550.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1782282..1782463 +
Ec-00_001550.1.9Ec-00_001550.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1782689..1782802 +
Ec-00_001550.1.10Ec-00_001550.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1783329..1783434 +
Ec-00_001550.1.11Ec-00_001550.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1783809..1785628 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0015505UTR:Ec-00_001550.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1776676..1776749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001550.1CDS:Ec-00_001550.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1776750..1776812 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0015503UTR:Ec-00_001550.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1783933..1785628 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001550.1Ec-00_001550.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1776750..1783932 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001550.1 ID=Ec-00_001550.1|Name=Ec-00_001550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=549bp
MMTAAFGDESASSMSLLPPIEGSGGDTGEDVDGNPREAARLLEEENPHHQ
PSYNGQRHEQQDVPGRQLMEDRWPSGQYSSLTTVPPGGASGGSPNVAWQD
PNTTTSAGEGDSDGMVTPGQGQAGLAPLDEQPPPDPFAMERPPIANGGRG
GGGAVGGEIRAKPPVAPRPARREWNLTTTKPSPKLSSTAVGATGAANGHI
SSDGKGVGVAGVGGGSVAGGGGVGLKPPKWLPDEDTSSCSGCGRDFDWAR
RRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEML
AESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMI
QDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPS
AIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVG
PVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKF
YGRQVSVRDLLSGSVAPPPAARPLYEALDNRGPGADQQRLLSQGFRVG*
back to top

spliced messenger RNA

>Ec-00_001550.1 ID=Ec-00_001550.1|Name=Ec-00_001550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3417bp|location=Sequence derived from alignment at chr_00:1776676..1785628+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CAGCCACATGGAAGCCGGAGCACAGACAGAGAGGGGCACGGCTGGAGGCT
TTTGCACTAACAAGGGCAGGGGAAATGATGACGGCCGCCTTCGGCGATGA
ATCGGCTAGCTCCATGAGCCTTCTTCCGCCAATTGAGGGCTCTGGCGGCG
ATACCGGGGAGGATGTAGATGGAAACCCACGAGAGGCGGCGCGACTACTG
GAGGAGGAAAACCCCCATCATCAGCCGTCCTACAACGGCCAACGCCACGA
GCAGCAAGACGTGCCAGGCAGGCAACTCATGGAAGACAGGTGGCCCAGCG
GACAATACTCCTCCTTGACAACGGTACCACCAGGTGGTGCTAGTGGTGGC
AGCCCCAACGTAGCTTGGCAAGATCCAAACACTACCACAAGTGCTGGCGA
AGGAGACAGCGACGGCATGGTTACTCCCGGACAGGGCCAGGCCGGACTAG
CCCCGCTTGACGAGCAACCTCCCCCGGATCCGTTTGCGATGGAGAGGCCG
CCGATCGCCAACGGCGGGCGGGGGGGGGGGGGCGCCGTGGGAGGTGAAAT
TCGCGCGAAGCCCCCAGTCGCACCACGGCCGGCAAGGAGGGAATGGAACC
TGACCACGACCAAGCCGTCTCCGAAGCTCTCGTCCACCGCGGTTGGCGCT
ACCGGCGCCGCGAACGGCCACATTTCCAGCGATGGCAAGGGCGTCGGTGT
GGCGGGAGTAGGAGGTGGGAGCGTGGCAGGCGGTGGGGGTGTGGGCCTGA
AGCCCCCCAAGTGGTTGCCCGACGAGGACACTTCGTCGTGCTCGGGATGC
GGGCGAGATTTTGATTGGGCGAGACGAAGGCACCACTGTCGCCTCTGCGG
AGGCATCTTCTGCTATGCGTGCAGCCAGTTCCGCGCGTTGTTGCCGCGAT
CGTTCGGGTCCCGAGACCCTCAGCGCCTTTGCCAGCCCTGCAACGCTAGG
GTTGCGCCGCTGCAGGAGATGCTGGCCGAGAGCGTTAGCAACGCCGTCAA
GGAGAACGATGTGGAGCGGGGAACCGTGGCCTCTTACCTCAACCGCCCGA
TCGTCTTCACGCTGGGAGCCGAGGTTCGGAAGGCCGCGTACACCATCCAC
AACTTCTCCAAAGAGGGCATGATTCAAGACCAGTCCATACCGCAGGAACT
TCTTAGCCGCGCCAAAGGACTCGCGTTCCTGACGGTTATCAAAGGGGGGT
TTATCGTTGCCGGCCGTGTGGGCACTGGCCTGGTCATCTCCAAGACGGAC
GAGGGAGTGTGGTCCGCGCCCTCCGCCATAGCGACGCTGGGCATGGGCTG
GGGCGCGCTCATCGGGGGCGAGATCACCGACTTCGTGCTGGTGCTCAACA
CGGATGCAGCCCTGGAGGCCTTCTCAGGAAGAGGTCAGGTGTCCATCGGC
GCAGAGCTTAGCGTGGCGGTCGGTCCCGTGGGGCGCACAGGGGCTGGCAA
TGTCAGCGTCGCGGCGGAGGGCGTCGCTCACGCTTATTCTTACAGTCACA
GCAGAGGCCTGTTTGCAGGTCTGAGCCTGGAGGGGGGAGTGATCGTGTCC
AGACCGGACGTGAACAGAAAATTTTATGGCCGACAAGTTTCCGTGAGGGA
CCTCCTTTCTGGAAGCGTAGCGCCTCCACCAGCGGCCCGGCCTCTATACG
AAGCTCTAGATAACAGGGGGCCAGGCGCCGACCAACAGCGGCTCCTTTCG
CAAGGATTTCGGGTAGGCTAGAAATACGAGGGGGGGATCAACGGCAGGGC
GTAAGCTGGTCCCTAAGGATTCGGGTGGGCTACATGCACGGGAGAAAACG
TTTCCATGTCAGAGGGCGGGTTCGGTCAAATGAATCGTAGCGGTTCCGGT
GCAAATCGGACGGGTTACCGTTACCTGGGCTTCTTCGGTGTTGAGCTTGT
GGCCTTTGCGTAGATCGGAAAGGAATTCCAACCATCTGCGAAGAAAGTTG
CTCAACAGTCACGCCCGCGTGAGATGTGGCGCATTTATTTCGAACTTTTT
TTACTGCCGGATGATGAAAGACTCGCCAGGCACTATACTGTTGAATATTT
CTCGGCATGTTTCAGTCGATGCACACGGATGTGCTGCACGCGTGGTGTTG
GTGTACCGTACGATATCTCCGTAGATGTGATTTTATTACATGCGGTTGTG
GAAGAAAGTGAGGGAGAAGCGTACATGTTCCATCAGAATGTTCCATCAGA
AATGATGCGTTGGCGGTGTTATTCTTGGTTGTGTTGCAAGTGTTCCTTGT
GTTTATGTTTTGCATATCGTTTGGTGGAGTGGGCAGGCCCCGCCCGGCGG
CCAGGATGGCCCAATCGCGGCGTGGGAGCTGTCGTTGTCGGTGTATGGAC
TGTGGTGCTGCATGCCGTGAGAGGTACCTTGCACACAGCAGTAGTGCACG
AGGCACGTAGTACATGGAGTCTCTTGTGCGAAGTTTGCCGAGATTCGGGA
GCAACTCCTTCTAAAATTCAGGGACCAGACTCATGTATGACGTGACTCTC
CAGCTAGAGGGCCCTGGGAGCGGGAATACACCGATGAACGTATGCGACAG
AGCCACGGAGACCAGTTGTGGATGGAGTCGAAGCGTTTCGACCAAAGCCA
CGACAAAAGACGGCGGCGTTGGAATACCCTCGCCACGCAACGGTTGTTAG
TTCGGGGCAAGTTGCTACGGCACGCGGAAGGCGGGCGCGGCGTGTGTTGA
ATATATTGTGTGCTGAGTGCGTCCTGTTCGCTTGGGAGTGAAGAAGACGA
AGAGAAAGTAGACACTTCGCGCATGTAGGAAAACACACAAGCTTTCGCAA
ATCGCAATAATAGTGTGGGAAATGGTAATGGAGGGAGTGATGCAGCGACA
GAAGGAGTCGTTTCGAGCTTTCAAGCCTCTGCCTTCCGTGGACCATGTAT
GTGCTGTAGACGGAGTATATTCTGTAGTCTAGAACTGATCGAACTGAAAA
ATCCGTCGTACGGTTTCAAGTAATAGGCACAGAACTGAAGATCCTTCTGC
ATGTTAAGGATATTTAGCAGATCGAGTCTTGGTACTTGGTTGTCTTCATG
GACCTCCTGTAGATCCACCTCATATGCTTAGACTTCTTAGTCGACAGCAA
CGGTGAGCGGGGCTGTGCAGATTGAGTTGGCGTCCGGCATGCCTTTTAAT
GACCGATGCCAACAAACTTTTTTGATCGGTGAAGAACGTGCAAGAGGGCG
TTCCCCCTGCGTAATGGAAGGCGCCACCACGGAACCTCGTGTATCCATGG
TTGACCGAGAGGTTGGGTTCTGACTTCCTTTGTGGGATATGCAGTAATTC
TATATCCCAACAACGACTATTTATTTTGCTTTGTTGAGCACACCTGTTTC
ATCCTACGTCAAGTCGATCTATCCCTTTGATATCTTCTTCTCCTTGGTTG
CCTGAAGTTAATGCCAC
back to top

protein sequence of Ec-00_001550.1

>Ec-00_001550.1 ID=Ec-00_001550.1|Name=Ec-00_001550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=549bp
MMTAAFGDESASSMSLLPPIEGSGGDTGEDVDGNPREAARLLEEENPHHQ
PSYNGQRHEQQDVPGRQLMEDRWPSGQYSSLTTVPPGGASGGSPNVAWQD
PNTTTSAGEGDSDGMVTPGQGQAGLAPLDEQPPPDPFAMERPPIANGGRG
GGGAVGGEIRAKPPVAPRPARREWNLTTTKPSPKLSSTAVGATGAANGHI
SSDGKGVGVAGVGGGSVAGGGGVGLKPPKWLPDEDTSSCSGCGRDFDWAR
RRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEML
AESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMI
QDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPS
AIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVG
PVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKF
YGRQVSVRDLLSGSVAPPPAARPLYEALDNRGPGADQQRLLSQGFRVG*
back to top

mRNA from alignment at chr_00:1776676..1785628+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001550.1 ID=Ec-00_001550.1|Name=Ec-00_001550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8953bp|location=Sequence derived from alignment at chr_00:1776676..1785628+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CAGCCACATGGAAGCCGGAGCACAGACAGAGAGGGGCACGGCTGGAGGCT
TTTGCACTAACAAGGGCAGGGGAAATGATGACGGCCGCCTTCGGCGATGA
ATCGGCTAGCTCCATGAGCCTTCTTCCGCCAATTGAGGTACGTCCTGCTC
TGGGTACCGTGCTGTACACGTCAACTTCAATTTCGTCCGCCGACCTCCAT
CGTTCGCGATGATGAGTAGGGTTCGTCATCCAGACTACCTCCCGTACTTA
CCGTGCCTCACCCAAGCGCCCATCACCCTGTCTGAGCATCATGCATAAGC
TCTCTCATTTGAGGAGTATTATTTCTGCTAGAAGTACCGCGGGTGTCGGG
TGTACAACTGCACTACACTGCTGTGTAGTTTAGGTCTGTGTTTTCTGCTT
CACGTACTGCAGCGCAGTGCTGTGCCGTTGTGTGCGAAGACTATTACACA
AGCAACGGCGGTGCCGTGAACGCGCGAAGTTCTGGTGGCACAGGCTACAC
TTGTTCCTGAGTCGTATGATGTGTCGCCGGTGCTCTCAGTACATTTTTTA
CGCCTGCATGTGTGGACGCAGTGGATAGGCCGCCATCCCACAATCCCTAT
ATTCGCACTTCGGACCTCCAACAGATGCAAGCACGGGCGGTGTGTAGTAC
GATGGTAGCAATATGCGTATGTACCAGCTGGGGGAGGAGGCGCCCATATA
TGACTCATTTTGAAGCTGGCCAATGGAACGAGGGGGGCATGTCGCGCTCA
ACTCAAGAGTCGCACTCTACTACTGCTGTACACTTTTTTTTCGGGTCCCG
TTATTTGGTTAGGTTTCAATTTAGAAATACGAACATAGAGGCAGTTGCCA
AATTCTCATTTCGACTCTGCTGCACATGTATGGATGTGAAGCAACAGGAG
GCCAACCACCACGCGCAAAACTCGAAAGACTAGTTATCATCGTACAAGTT
TATCCCGCTGTGTGCGAGAAGTTCGTTTTTGCGACCTAGTTCTTCCATAG
TATGCATACACCGCTGCGAAAAGACGACAATTACGCTGCCCTCCCCCTTT
TTCTAGTCGACCGTGGTCGTCGCGGTTCTTTACAAAGCTGTGAGGTTATG
TTTACTTTCAACAAATGCTGCCAGCCACGGGAAGGCATGCTAGTTCTACG
GAGATTTTATTTCAATCGTCGTGTGTGCCTCTTTACTTATTTTCTGACCG
TGTGCGGGCTGGCCGCTACGTTATTATACATGTTACAGGGCTCTGGCGGC
GATACCGGGGAGGATGTAGATGGAAACCCACGAGAGGCGGCGCGACTACT
GGAGGAGGAAAACCCCCATCATCAGGTGCGATGGAACTGTGCTTCTCTTT
TTTATCTGCCGTGTGGACGCAAAGGATTATAGTATGGTACATGTTTTTTT
TCTTGTGAGGTTTGCGCTTATTTCTTTTCTGCCGCTGAGTGGCGTTCCTT
GACGGAGAGAAAGGGAAGGAGCAGCAGGAAATGTTTTTGAAGAAGGTCAC
ACGATATCTTCCGCAACATGATCGGACGGCTCAGAGCTCCAGCCTCCTTT
CTCAGAATCGCTTGCTACTACCTCTTGGAAGGTGATCTTGTGTCCATCCT
CAAACACCCCTCATTCCTCTTGCTGTCCTATCCACACCCCCCCGCCGGCC
CAGCCGTCCTACAACGGCCAACGCCACGAGCAGCAAGACGTGCCAGGCAG
GCAACTCATGGAAGACAGGTGGCCCAGCGGACAATACTCCTCCTTGACAA
CGGTACCACCAGGTGGTGCTAGTGGTGGCAGCCCCAACGTAGCTTGGCAA
GATCCAAACACTACCACAAGTGCTGGCGAAGGAGACAGCGACGGCATGGT
TACTCCCGGACAGGGCCAGGCCGGACTAGCCCCGCTTGACGAGCAACCTC
CCCCGGATCCGTTTGCGATGGAGAGGCCGCCGATCGCCAACGGCGGGCGG
GGGGGGGGGGGCGCCGTGGGAGGTGAAATTCGCGCGAAGCCCCCAGTCGC
ACCACGGCCGGCAAGGTATAGCAGTGGCGTGGCTGTTGGTCTGGTAGTGC
AAGATGTAAGATTAGCGTTGCCGGACTCCTGGTGGTCTGGCTGGATGGAT
GATCGTCAAGCGTTGAAATGAAGCTTTTTTAACTGTACGCGTTTTAGGGC
CGACGTCCAAAATAACATGAAAGGGTGGCGTCCGACGATTTTATGACTTC
TCCGGGGTTGACCTCTTCGCTTGTACCGGCCGAAGCTGGTGGGCCTGGAG
TCAGAACCGGCTTGTGTTGACATCGAAAAACTGGGCACGTGAGGCATAGC
GCCGCCGCTCATCTGCTTGCGACCCAGCAGTGCCAGCCACTGCTGTACCA
CACCAGTAACACATGCGCTGGCGGGGTACTAACACCAACACGCTCCAACA
CGCCGTCGTGCCTTGGCCTCCAATGCAGCGCGTACCCAAAGCCCCGTCAA
GACTTGGCCGCATTCGTTGCAAAGAAGGGGTTGTTGTTGTTGTTGTTGTT
GTCTTCACATTAAAAACCGTTCCGATCTCTCTCTACCCAGTACCTTCGTA
TGTCCGTACTGATCCAACACTCGACGCGGTCGATTCCCGTGGTCACAGGT
TAACTTACCCTAAAAAGGTACACTCAAATATACTGGCCCCGAGGGGTCCG
CAAGTCAATAGAAATCAACGACAGATATTCTGGGATCCTCCACTCCCTCT
TCGCGCTATGCGAGGTATCAACTGAGACTAGCAGTCACTATCTATCATGG
GCCGGAGAGAAAGAGGTACACCCCCTTGGTTCAATCTTGGTACTTCACAA
CGCAAGCAGAGACAAGACCATCTGGCACAGAAAAAGAGAGAGAAAAAGAG
AGAAAAAAAAAAAGAAAAAAGAGAAAAAAAAAGGGTATGACGGAACCGAT
CGTTGCGAAAGGTGGGTTCTACAGGCTTATGACCCCCGCCCCCGTATGTA
TTCTTCATGTTAATCTTCCGCTGTTCGCGCAGGAGGGAATGGAACCTGAC
CACGACCAAGCCGTCTCCGAAGCTCTCGTCCACCGCGGTTGGCGCTACCG
GCGCCGCGAACGGCCACATTTCCAGCGATGGCAAGGGCGTCGGTGTGGCG
GGAGTAGGAGGTGGGAGCGTGGCAGGCGGTGGGGGTGTGGGCCTGAAGCC
CCCCAAGTGGTTGCCCGACGAGGACACTTCGTCGTGCTCGGGATGCGGGC
GAGATTTTGATTGGGCGAGACGAAGGGTGAGGGTATGCCCGTTGTGCGGG
GAGAGGGGGGAGGGTCACGTCCACAGAGGAAAAGCTCCCAACACTGGTGT
TCCACGCGTGGTTCGGGGCAATGGATTATTTGGATGTATTCACCTGCTAC
ATCTGCGCCTGTGCGTAGCGGATATGTTATTCTCTGCTGGCAGCGCCGTA
ATTTTGTCAACTAGTCCGATAGAGATGCAGAGACGTCTTTGGCGGGTTTG
TCGTGTTTGTTCGGTATGTTGAGCGTGGTCATAACTGCTGCCCCCTTGTA
GGTCGTGGGTCTGTTTCAGGCCGTCGTTTCCCCGCTCCCACCCCCCGCTC
CCACCCCCCACCCCCACGCCCCGCCGGACATGTCTTTCATTGCACAGATC
CCCAACGTCGTGGCCTTGCCTCTTCCCACACCTTATTTTCGCAAATGGCG
CCCCTTTTCCCGGCAACTCCTCCTTCGTTGTGCTGTACCACGGTGCTGTT
ATTGTGTGTCTGGCTCCTGTGGCATCGTCAGCACCACTGTCGCCTCTGCG
GAGGCATCTTCTGCTATGCGTGCAGCCAGTTCCGCGCGTTGTTGCCGCGA
TCGTTCGGGTCCCGAGACCCTCAGCGCCTTTGCCAGCCCTGCAACGCTAG
GGTTGCGCCGCTGCAGGAGATGCTGGCCGGTGGGTGCTCTTGATGTAAAC
TTTTGCGCGCTAGTGGCGGTGTGAGCAAGGAAGAATTGGGTTCGGAGCGG
CGTGTGTGGTCGCATGATTCGCTACCACACTTGTGTTTATCGTTGGTGAG
GGGGGTCAAAGGGAACAGGTGGTGTGTAGCCTAGGATTACCTCTTTGGAA
AGTTAAAGCTGTGAAACCTTTGCTGCAGCGTTTTGTAGAAAATGTTTTTT
TTACGATCACAGAAAGACTACTCGCTTGACTATAACTTCGCACGCTGTGT
TATGCGAAACTGCAAGTGTCGCGAAGATTCCACAAGCCCTTATGATGTTG
TACATGGTAGATTAGTCAGGCTGCTAGATTGTGGGACCGAGTCGCTGTAG
TGTGGGCAATGCGGTGAAGGGAGGCGACGTGTGTCAATGGCGGGAAAAGT
GTGTCTAGAAGTCTAAGGTCATTAGCAGTATACCGTTTGGTTCGGCAGAC
GGGTTGTACGGTTGTACCCGTCTTCGCCCATGGCTGAATCGTGCCACCAC
AATCCACAATTAGCGAAATCCCTAGACGGCATCGAAATCTCCTGCGGATT
CATGCACGAGTTGCTGCATGCATGCTTACACGAAACACTTGGAATATGCC
CCCACTGCTGCTGGTCGCACCCCTGCCTGCCGAGCAGAGAGCGTTAGCAA
CGCCGTCAAGGAGAACGATGTGGAGCGGGGAACCGTGGCCTCTTACCTCA
ACCGCCCGATCGTCTTCACGCTGGGAGCCGAGGTTCGGAAGGCCGCGTAC
ACCATCCACAACTTCTCCAAAGAGTGAGTGAAGTGAAAAGCGGACGCGGA
GTGCAGCCTATGCCAGGGTGTTCTATCGCGTCTGGTCTTGGTCGGTGGCG
ATGTCGGTGGCTGGGTCGCCCTTGGAAGTCGCTGTCTGTTTTGTTGTGCT
CTTTGGTTGGAGGCACGGTGTCTCTGCCGTCGCAGCTATCCTGTTCTGTT
TCACCATGTGTTCGTCGTGGTTGCCGTTGCTATCGCTGTTGCTCTTGGTG
TTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGTCATCGTCGCGGTGTTGAAAGTACTGCTGTT
GTTGTAGCTGCTGGCGTTGATTTCCGCGTGGCATGTACTACTACGCTGGG
GCTCCTCCCAAGCGCTTGGCGTTTGGGTGGTAGATGGTGATGTCGACGCC
ATCGTTATCCTCTTCGCGCGTGCCCTCGGCACTACACACGCTCGTCTTCA
TCCTGAAACGATTTCCCTGTCGTCTGTCGACGTTGATTTGCTTCGGCCCT
CTCGATCGCGTCGCGAAAAGGGGCATGATTCAAGACCAGTCCATACCGCA
GGAACTTCTTAGCCGCGCCAAAGGACTCGCGTTCCTGACGGTTATCAAAG
GGTGAGTCAGGATCGATGCTCAAGAGAACACACCCCAGTGATAACTTCTG
AAACAAGTGTCAACGGAGGTGGTATTGGGTTGCGGCGTGTGATGTCTTTT
GCCGTCCTAGTGCTTGATCCGAGGGTAGTTTACTGTTTTGGGCTTATGTT
GACACGTCCATGATATTGAGATTGAGGTCAATACGACCGTTTGACGCAAC
CACGAAACGTCACCACCACGACCTCCAACAACATGCAATAGCAATAGTCA
TTCCTCGTCTCTTTTGTTCTTCTGCATGCATGATGTCAACCGCAAATCGA
TTGCAGGGGGTTTATCGTTGCCGGCCGTGTGGGCACTGGCCTGGTCATCT
CCAAGACGGACGAGGGAGTGTGGTCCGCGCCCTCCGCCATAGCGACGCTG
GGCATGGGCTGGGGCGCGCTCATCGGGGGCGAGATCACCGACTTCGTGCT
GGTGCTCAACACGGATGCAGCCCTGGAGGCCTTCTCAGGTGCGTAAGCCG
GGGCTGGGAGTCGTGAACACGTTCTATAATAGTCCTTTCCATGAACAGCT
TGATCACACATGATGGATTGTTTCCATTACCGTCGCAGTATCCACGAAAA
TATTGCGCACAGCCTTTGTCCCTTCCGTCTCACCAAAACATGGGAGTTGT
TGATACACGCGTTGCTGACGCGCATCCTATCCTCGCCTGCCTTGCATCGC
ATCGTGTTTGCAGGAAGAGGTCAGGTGTCCATCGGCGCAGAGCTTAGCGT
GGCGGTCGGTCCCGTGGGGCGCACAGGGGCTGGCAATGTCAGCGTCGCGG
CGGAGGGCGTCGCTCACGCTTATTCTTGTGAGTCAGTCACTCAGCGTTAC
AAGACATCCTCGGCCTCGTTTGCCTCTCATGCGGTACAAGACGGTCTCGA
TGCTAAGGAGTGTGGCAGAGGAGCCTCGTGGGCATCAAAACCGAACTCTC
AAGAAGAAGCTAGGGAGGAATTATTTAATCATTTTGGAACGGGTGTTTGT
GTGCGAAGTATTGTTGGTCGATGGCATACCGCATACCTACCTGTGCGGGG
CTAGAAATCGGACATTCAGTTCTCCTCTTGTATCCTTGTAGTACATATTC
CCATTTTTTTTTTTTTTGTCCCACAGTTGCCTTACCACAAACGAAGGTCA
CCATGAAAAGGATACGACTGCGTGATGCGGTATGTGTGTGCCGTGAGATA
CCGCAGGTTGAATTGATACTAATGCGAGCGACATTCCCCTCACACCGTTT
CAGTAGTGAACCCTGCTCGCTCTGCTCTGACCTCGCGGCGCTATTCCGAT
TGCCCTGTTTGTCGGGGCCCCAACACGACGGCTGGTGCTCTACGGTACCG
CAGACAGTCACAGCAGAGGCCTGTTTGCAGGTCTGAGCCTGGAGGGGGGA
GTGATCGTGTCCAGACCGGACGTGAACAGAAAATTTTATGGCCGACAAGT
TTCCGTGAGGTGAGAAAGGCGGGGTAACAAGATTTTGTGTGAGGAAGAGC
CCAATGGTGGCCGACAACGTCATACCAGTTTTCGGCAAGCTCTCGCCGTA
GCGTCGTTTTTCGCTTCCACCACTGACAGCCCCGTCCTCGATGCAACGCC
TGCACATGTCTTGTCCACGTGCATCATCAGCCAGGTAAATCGATCGTATC
ACCGAATACAGGGAAACATGGGTACCTAGACAGCCCAGCTTCCCTCCCCA
AAATGATCATGTATCGAGTTCTTCGTCGGCACTGTACGATACTGCCACCA
GCTTGCTCTTGTTATTGCTGTTGTTGTACAGCTGTTCTAACGGTTGCTGT
TCCTACCGATTTTTTTTTGGTTCTGCGGTCCAGGGACCTCCTTTCTGGAA
GCGTAGCGCCTCCACCAGCGGCCCGGCCTCTATACGAAGCTCTAGATAAC
AGGGGGCCAGGCGCCGACCAACAGCGGCTCCTTTCGCAAGGATTTCGGGT
AGGCTAGAAATACGAGGGGGGGATCAACGGCAGGGCGTAAGCTGGTCCCT
AAGGATTCGGGTGGGCTACATGCACGGGAGAAAACGTTTCCATGTCAGAG
GGCGGGTTCGGTCAAATGAATCGTAGCGGTTCCGGTGCAAATCGGACGGG
TTACCGTTACCTGGGCTTCTTCGGTGTTGAGCTTGTGGCCTTTGCGTAGA
TCGGAAAGGAATTCCAACCATCTGCGAAGAAAGTTGCTCAACAGTCACGC
CCGCGTGAGATGTGGCGCATTTATTTCGAACTTTTTTTACTGCCGGATGA
TGAAAGACTCGCCAGGCACTATACTGTTGAATATTTCTCGGCATGTTTCA
GTCGATGCACACGGATGTGCTGCACGCGTGGTGTTGGTGTACCGTACGAT
ATCTCCGTAGATGTGATTTTATTACATGCGGTTGTGGAAGAAAGTGAGGG
AGAAGCGTACATGTTCCATCAGAATGTTCCATCAGAAATGATGCGTTGGC
GGTGTTATTCTTGGTTGTGTTGCAAGTGTTCCTTGTGTTTATGTTTTGCA
TATCGTTTGGTGGAGTGGGCAGGCCCCGCCCGGCGGCCAGGATGGCCCAA
TCGCGGCGTGGGAGCTGTCGTTGTCGGTGTATGGACTGTGGTGCTGCATG
CCGTGAGAGGTACCTTGCACACAGCAGTAGTGCACGAGGCACGTAGTACA
TGGAGTCTCTTGTGCGAAGTTTGCCGAGATTCGGGAGCAACTCCTTCTAA
AATTCAGGGACCAGACTCATGTATGACGTGACTCTCCAGCTAGAGGGCCC
TGGGAGCGGGAATACACCGATGAACGTATGCGACAGAGCCACGGAGACCA
GTTGTGGATGGAGTCGAAGCGTTTCGACCAAAGCCACGACAAAAGACGGC
GGCGTTGGAATACCCTCGCCACGCAACGGTTGTTAGTTCGGGGCAAGTTG
CTACGGCACGCGGAAGGCGGGCGCGGCGTGTGTTGAATATATTGTGTGCT
GAGTGCGTCCTGTTCGCTTGGGAGTGAAGAAGACGAAGAGAAAGTAGACA
CTTCGCGCATGTAGGAAAACACACAAGCTTTCGCAAATCGCAATAATAGT
GTGGGAAATGGTAATGGAGGGAGTGATGCAGCGACAGAAGGAGTCGTTTC
GAGCTTTCAAGCCTCTGCCTTCCGTGGACCATGTATGTGCTGTAGACGGA
GTATATTCTGTAGTCTAGAACTGATCGAACTGAAAAATCCGTCGTACGGT
TTCAAGTAATAGGCACAGAACTGAAGATCCTTCTGCATGTTAAGGATATT
TAGCAGATCGAGTCTTGGTACTTGGTTGTCTTCATGGACCTCCTGTAGAT
CCACCTCATATGCTTAGACTTCTTAGTCGACAGCAACGGTGAGCGGGGCT
GTGCAGATTGAGTTGGCGTCCGGCATGCCTTTTAATGACCGATGCCAACA
AACTTTTTTGATCGGTGAAGAACGTGCAAGAGGGCGTTCCCCCTGCGTAA
TGGAAGGCGCCACCACGGAACCTCGTGTATCCATGGTTGACCGAGAGGTT
GGGTTCTGACTTCCTTTGTGGGATATGCAGTAATTCTATATCCCAACAAC
GACTATTTATTTTGCTTTGTTGAGCACACCTGTTTCATCCTACGTCAAGT
CGATCTATCCCTTTGATATCTTCTTCTCCTTGGTTGCCTGAAGTTAATGC
CAC
back to top

Coding sequence (CDS) from alignment at chr_00:1776676..1785628+

>Ec-00_001550.1 ID=Ec-00_001550.1|Name=Ec-00_001550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1647bp|location=Sequence derived from alignment at chr_00:1776676..1785628+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGACGGCCGCCTTCGGCGATGAATCGGCTAGCTCCATGAGCCTTCT
TCCGCCAATTGAGGGCTCTGGCGGCGATACCGGGGAGGATGTAGATGGAA
ACCCACGAGAGGCGGCGCGACTACTGGAGGAGGAAAACCCCCATCATCAG
CCGTCCTACAACGGCCAACGCCACGAGCAGCAAGACGTGCCAGGCAGGCA
ACTCATGGAAGACAGGTGGCCCAGCGGACAATACTCCTCCTTGACAACGG
TACCACCAGGTGGTGCTAGTGGTGGCAGCCCCAACGTAGCTTGGCAAGAT
CCAAACACTACCACAAGTGCTGGCGAAGGAGACAGCGACGGCATGGTTAC
TCCCGGACAGGGCCAGGCCGGACTAGCCCCGCTTGACGAGCAACCTCCCC
CGGATCCGTTTGCGATGGAGAGGCCGCCGATCGCCAACGGCGGGCGGGGG
GGGGGGGGCGCCGTGGGAGGTGAAATTCGCGCGAAGCCCCCAGTCGCACC
ACGGCCGGCAAGGAGGGAATGGAACCTGACCACGACCAAGCCGTCTCCGA
AGCTCTCGTCCACCGCGGTTGGCGCTACCGGCGCCGCGAACGGCCACATT
TCCAGCGATGGCAAGGGCGTCGGTGTGGCGGGAGTAGGAGGTGGGAGCGT
GGCAGGCGGTGGGGGTGTGGGCCTGAAGCCCCCCAAGTGGTTGCCCGACG
AGGACACTTCGTCGTGCTCGGGATGCGGGCGAGATTTTGATTGGGCGAGA
CGAAGGCACCACTGTCGCCTCTGCGGAGGCATCTTCTGCTATGCGTGCAG
CCAGTTCCGCGCGTTGTTGCCGCGATCGTTCGGGTCCCGAGACCCTCAGC
GCCTTTGCCAGCCCTGCAACGCTAGGGTTGCGCCGCTGCAGGAGATGCTG
GCCGAGAGCGTTAGCAACGCCGTCAAGGAGAACGATGTGGAGCGGGGAAC
CGTGGCCTCTTACCTCAACCGCCCGATCGTCTTCACGCTGGGAGCCGAGG
TTCGGAAGGCCGCGTACACCATCCACAACTTCTCCAAAGAGGGCATGATT
CAAGACCAGTCCATACCGCAGGAACTTCTTAGCCGCGCCAAAGGACTCGC
GTTCCTGACGGTTATCAAAGGGGGGTTTATCGTTGCCGGCCGTGTGGGCA
CTGGCCTGGTCATCTCCAAGACGGACGAGGGAGTGTGGTCCGCGCCCTCC
GCCATAGCGACGCTGGGCATGGGCTGGGGCGCGCTCATCGGGGGCGAGAT
CACCGACTTCGTGCTGGTGCTCAACACGGATGCAGCCCTGGAGGCCTTCT
CAGGAAGAGGTCAGGTGTCCATCGGCGCAGAGCTTAGCGTGGCGGTCGGT
CCCGTGGGGCGCACAGGGGCTGGCAATGTCAGCGTCGCGGCGGAGGGCGT
CGCTCACGCTTATTCTTACAGTCACAGCAGAGGCCTGTTTGCAGGTCTGA
GCCTGGAGGGGGGAGTGATCGTGTCCAGACCGGACGTGAACAGAAAATTT
TATGGCCGACAAGTTTCCGTGAGGGACCTCCTTTCTGGAAGCGTAGCGCC
TCCACCAGCGGCCCGGCCTCTATACGAAGCTCTAGATAACAGGGGGCCAG
GCGCCGACCAACAGCGGCTCCTTTCGCAAGGATTTCGGGTAGGCTAG
back to top
Synonyms
The feature 'Ec-00_001550.1' has the following synonyms
Synonym
Esi0013_0115
Esi_0013_0115