Ec-00_001520.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001520.1
Unique NameEc-00_001520.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length416
Homology
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BLAST of Ec-00_001520.1 vs. uniprot
Match: D8LEC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC0_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 1.470e-155
Identity = 334/364 (91.76%), Postives = 343/364 (94.23%), Query Frame = 2 
Query:  179 MFSQAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVRTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRLGMLSLNAALMKEEVKTEKAERDMATCRAKYEECRSSLQSAREQMARDSAQTEAVEEATRKAATQGKETGPQAQQQLVAEGSHASTASE--LDEEGFGLRHMEEAMLRSMEE-VKQDGRCDPRQGNVSSAPWAKATAAPARXXXXXXXXXXXTASTNRWAVFAED 1261
            MFS+AKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALV TVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      LQRLGM SLNAALMKEE KTEKAERDMATCRAKYEECRSSLQSAREQMARDSAQ EAV+EA RKAATQGKETGPQAQ+Q VA+GSHASTAS+  LDEEGFGL+HME+AMLRS+EE VKQDG CDP+QG VSSAP AKA AAPARXXXXXXXXX  TASTNRWAVFAED
Sbjct:    1 MFSRAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVHTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQLQRLGMRSLNAALMKEEGKTEKAERDMATCRAKYEECRSSLQSAREQMARDSAQAEAVKEAARKAATQGKETGPQAQKQQVAQGSHASTASDAKLDEEGFGLQHMEQAMLRSLEEEVKQDGVCDPQQGKVSSAPRAKAIAAPARXXXXXXXXXLPTASTNRWAVFAED 364
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BLAST of Ec-00_001520.1 vs. uniprot
Match: D8LEC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC9_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.090e-51
Identity = 124/238 (52.10%), Postives = 131/238 (55.04%), Query Frame = 2 
Query:  158 VGSKMAGMFSQAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKHQADRESALVRTVEESRAETATANEKTTRFEAQRDTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRLGMLSLNAALMKEEVKTEKAERDMATCRAKYE 871
            VGSK+AGMFS+AKVLLPGYRRAAKELAERQQL LEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGK QADRESALV TVEESRAETATANEKT   EAQRD                                                                                                  LQRLGML LN A++KEE KT+KAERD+ATCRAKY+
Sbjct:    7 VGSKIAGMFSRAKVLLPGYRRAAKELAERQQLGLEFAAYKWKMAVGGVAFTVLILILVLSMVILLRWWGKRQADRESALVHTVEESRAETATANEKTMLIEAQRD--------------------------------------------------------------------------------------------------LQRLGMLFLNGAIIKEEEKTKKAERDLATCRAKYD 146
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BLAST of Ec-00_001520.1 vs. uniprot
Match: A0A6H5K864_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K864_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 4.340e-22
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 2 
Query:  935 AVEEATRKAATQGKETGPQAQQQLVAEGSHASTASE--LDEEGFGLRHMEEAMLRSMEEVKQDGRCDPRQGNVS 1150
            AVEEA RK ATQGKETGPQAQQQ + +GSHASTAS+  L +EGFGLRHMEEAMLRSMEE KQDG  +P+QG VS
Sbjct:   36 AVEEAARKGATQGKETGPQAQQQQLPQGSHASTASDAKLGKEGFGLRHMEEAMLRSMEESKQDGGRNPQQGKVS 109
[Close]
BLAST of Ec-00_001520.1 vs. uniprot
Match: A0A6H5KTB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB2_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.750e-16
Identity = 106/136 (77.94%), Postives = 112/136 (82.35%), Query Frame = 2 
Query:  473 TARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL---QRLGMLSLNAALMKEEVKTEKAERDMATCRAKYE 871
            TARSACYEFQLAVVENRADSH+A A+ ARVKT L T+TKL +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          QRL ML LNAAL+KEE KTEKAERD+ATCRAKYE
Sbjct:   22 TARSACYEFQLAVVENRADSHKAGADLARVKTDLPTKTKLFRRTEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNVQTQASAPQRLRMLCLNAALVKEEGKTEKAERDLATCRAKYE 157
The following BLAST results are available for this feature:
BLAST of Ec-00_001520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEC0_ECTSI1.470e-15591.76Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D8LEC9_ECTSI1.090e-5152.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K864_9PHAE4.340e-2277.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTB2_9PHAE3.750e-1677.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1733534..1737553 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1867
Hectar predicted targeting categorysignal anchor
Gene idEc-00_001520.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001520Ec-00_001520Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1733534..1737553 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001520.1Ec-00_001520.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1734127..1737105 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001520.1.1Ec-00_001520.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1733534..1733691 +
Ec-00_001520.1.2Ec-00_001520.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1734114..1734429 +
Ec-00_001520.1.3Ec-00_001520.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1734770..1734916 +
Ec-00_001520.1.4Ec-00_001520.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1735113..1735259 +
Ec-00_001520.1.5Ec-00_001520.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1735457..1735561 +
Ec-00_001520.1.6Ec-00_001520.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1735867..1736179 +
Ec-00_001520.1.7Ec-00_001520.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1736615..1736731 +
Ec-00_001520.1.8Ec-00_001520.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1736990..1737553 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0015205UTR:Ec-00_001520.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1733534..1733691 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001520.1CDS:Ec-00_001520.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1734127..1734429 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0015203UTR:Ec-00_001520.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1737106..1737553 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001520.1 ID=Ec-00_001520.1|Name=Ec-00_001520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=416bp
MAGMFSQAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLI
LILVLSMVILLRWWGKHQADRESALVRTVEESRAETATANEKTTRFEAQR
DTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKRTEAEKQ
MARSACYEYQLEGIHNRQDANRASMALAQAEHDLQKMTEVVARFNVQTQL
QRLGMLSLNAALMKEEVKTEKAERDMATCRAKYEECRSSLQSAREQMARD
SAQTEAVEEATRKAATQGKETGPQAQQQLVAEGSHASTASELDEEGFGLR
HMEEAMLRSMEEVKQDGRCDPRQGNVSSAPWAKATAAPARRRREKKKEPP
PTASTNRWAVFAEDEDDDDEDEGKGAEGATPADATPATSPPGRGRTRGKS
PSPSRRRANNGRQDS*
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spliced messenger RNA

>Ec-00_001520.1 ID=Ec-00_001520.1|Name=Ec-00_001520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1867bp|location=Sequence derived from alignment at chr_00:1733534..1737553+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TTCAACCCCCGTCCCAAGAATAAAGATCCACCCGTGCTAGCCACATCCAT
CTAGCATCCCCTAGCCCACTTGACACAGCCATCCACAGCCTAACCCAAGC
AATCGATAACCCAAGCAATCGACTTACTACGGCATCGGGCGATAGCAACG
GCATTCAGCGTTGGAAGCAAGATGGCGGGCATGTTTTCGCAGGCGAAGGT
CCTGCTCCCGGGGTACCGGCGGGCGGCGAAGGAGTTGGCAGAACGCCAGC
AGCTGGAGTTAGAGTTCGCGGCCTACAAGTGGAAGATGGCCGTGGGGGGC
GTCGCCTTCACGGTCTTGATCCTGATCCTGGTCCTGAGCATGGTGATACT
GCTGCGGTGGTGGGGTAAGCACCAAGCGGACCGTGAGTCCGCCCTGGTGC
GCACCGTTGAGGAATCAAGGGCAGAAACTGCTACAGCCAACGAGAAGACA
ACGCGTTTCGAAGCCCAGAGAGACACGGCACGCTCAGCCTGCTATGAGTT
CCAGCTGGCTGTTGTCGAGAACAGGGCAGACTCCCACAGGGCTAGCGCCG
AATCGGCGCGAGTCAAAACCCAGCTGCAGACAAGGACGAAGCTGTTAAAA
AGGACGGAAGCCGAGAAGCAGATGGCACGCTCGGCCTGCTACGAGTACCA
GCTGGAGGGAATCCACAACCGGCAAGACGCCAACAGGGCGAGCATGGCGT
TGGCGCAGGCCGAGCACGACTTGCAGAAAATGACCGAGGTGGTAGCCCGG
TTCAACGTCCAGACCCAGCTCCAGCGCTTAGGGATGCTTTCTCTAAACGC
CGCATTGATGAAGGAGGAAGTAAAGACGGAAAAGGCGGAACGTGACATGG
CTACTTGTCGTGCAAAATACGAGGAATGTCGGTCCTCGCTGCAGTCGGCG
AGGGAGCAGATGGCGAGGGATTCTGCTCAGACGGAGGCGGTCGAGGAGGC
TACCCGCAAGGCAGCAACGCAGGGGAAAGAGACGGGGCCTCAAGCCCAGC
AGCAGCTTGTTGCCGAGGGTTCGCACGCGTCCACGGCCAGCGAGCTGGAC
GAGGAAGGGTTCGGCCTGCGGCACATGGAGGAGGCGATGCTTCGGTCCAT
GGAGGAGGTCAAGCAGGACGGGAGGTGTGACCCGCGACAGGGGAATGTTT
CATCAGCACCGTGGGCCAAGGCGACAGCAGCACCGGCGAGGAGGAGGAGG
GAGAAGAAGAAGGAGCCCCCCCCCACAGCGTCAACCAACCGGTGGGCAGT
TTTCGCCGAAGACGAGGATGACGACGACGAGGACGAGGGCAAGGGAGCAG
AAGGAGCAACGCCCGCCGACGCCACGCCCGCCACGTCGCCCCCCGGCAGG
GGCCGAACCCGCGGCAAGTCGCCGAGCCCGAGTCGCCGACGGGCCAACAA
TGGACGCCAAGACTCCTAGTCCGACAGGGCAGGCCGTCTTGCACACACCG
GGCTGTGCACAGGATGCAAGGGGCCTCGGGTTTGCACTTTCTGCAATATT
CTGCCGCGCGAACGCTTGGCATTTCGAGGAGACGAGAGCCCATGTGTCGC
TGTGTAGAAGTAGGTCATGTACCATACGTACTGATATCTGTGTCAGAAGA
GAACTGAAGGGTTTGAAAAAGATCTCACCTTTCATCCATACTGGTACGCG
TGGATAGCCCTGTTAGAGTGATGTGCCTTGGCAGACAACCAGCTTGCTCC
TGTTGGTATTGGTCGCGTGGCGTAAAGAGGGCTCGCGTCAGGGACTGAGA
ACCCACGGGCTGGGGCCAAGAGTCAACTCCATTATCTGATTCTTTCGCTG
CCGGCACTACGACGGCCATTCACCGTACATGCTGCTCCCAAGCATGAAGT
GTCGAATTCATCAGGCA
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protein sequence of Ec-00_001520.1

>Ec-00_001520.1 ID=Ec-00_001520.1|Name=Ec-00_001520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=416bp
MAGMFSQAKVLLPGYRRAAKELAERQQLELEFAAYKWKMAVGGVAFTVLI
LILVLSMVILLRWWGKHQADRESALVRTVEESRAETATANEKTTRFEAQR
DTARSACYEFQLAVVENRADSHRASAESARVKTQLQTRTKLLKRTEAEKQ
MARSACYEYQLEGIHNRQDANRASMALAQAEHDLQKMTEVVARFNVQTQL
QRLGMLSLNAALMKEEVKTEKAERDMATCRAKYEECRSSLQSAREQMARD
SAQTEAVEEATRKAATQGKETGPQAQQQLVAEGSHASTASELDEEGFGLR
HMEEAMLRSMEEVKQDGRCDPRQGNVSSAPWAKATAAPARRRREKKKEPP
PTASTNRWAVFAEDEDDDDEDEGKGAEGATPADATPATSPPGRGRTRGKS
PSPSRRRANNGRQDS*
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mRNA from alignment at chr_00:1733534..1737553+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001520.1 ID=Ec-00_001520.1|Name=Ec-00_001520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4020bp|location=Sequence derived from alignment at chr_00:1733534..1737553+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TTCAACCCCCGTCCCAAGAATAAAGATCCACCCGTGCTAGCCACATCCAT
CTAGCATCCCCTAGCCCACTTGACACAGCCATCCACAGCCTAACCCAAGC
AATCGATAACCCAAGCAATCGACTTACTACGGCATCGGGCGATAGCAACG
GCATTCAGGTGAGAGAGGTGGTGTGCGCATACGGAGAGCATGCACGGTAG
CCGCCGGTCGAAGTGGTTCCATCTTGTGCCAACTGATTCGACGGTGACCT
GAAACGAGGTATGTATGTAGACCGCAAGCAGTCTTCCAAGGAGAATGGAG
AGAAGCAAGCTATCACCGTACCCTCTGTATGTGGTTCGCGTTCAAGGCGT
TCGCATACTAGTCTATAGTGTGCATAAGTGGACAACTGTCTCGAACACGC
TGAACCAAGGAAGAAGTGTGCCGAAGCGAACGTTGGCGAAGCTTCTGTTG
CGGGATTCGCGATGGTTTGGCCGAAGAGAGAGATAGAAAGACATACGTAA
GTCATCAACTAGCCACCGGTAACGATCGCTTAGACCACCCCGCTCGCGCT
CATTTCTGCCCCATCCCCTCCCAATCCCAGCGTTGGAAGCAAGATGGCGG
GCATGTTTTCGCAGGCGAAGGTCCTGCTCCCGGGGTACCGGCGGGCGGCG
AAGGAGTTGGCAGAACGCCAGCAGCTGGAGTTAGAGTTCGCGGCCTACAA
GTGGAAGATGGCCGTGGGGGGCGTCGCCTTCACGGTCTTGATCCTGATCC
TGGTCCTGAGCATGGTGATACTGCTGCGGTGGTGGGGTAAGCACCAAGCG
GACCGTGAGTCCGCCCTGGTGCGCACCGTTGAGGAATCAAGGGCAGAAAC
TGCTACAGCCAACGAGAAGACAACGCGTTTCGAAGCCCAGAGAGACGTAA
GTGCTTTTTCCATTGCTGCCGTAGCATACACGTTAGGCCAAGCCGGGCCG
ATACGGCCAGTGCTATCGAAACACACTCTCTTCCATCGGCAATTCACGTC
CATTTCTCATTATCACAGATAGACGGTGTTGAAAGTTCACCGCATTCCTT
CCGCGCCCGCCCTGCGGATCGTTCATCCACAGATTGCAAGTGGGTTGTGC
CATCGAAATCAACTCTTTGTCAGCGGGACTTTGTCTTCCGTTGTGGTTTC
GATGTTTTAGGCAACGGCGTGCATGGTCCACATATGTGTCTCAAGAATCC
CCCCCCCCGCATGCCGTACGCTGCGTTCGTCTGCAGACGGCACGCTCAGC
CTGCTATGAGTTCCAGCTGGCTGTTGTCGAGAACAGGGCAGACTCCCACA
GGGCTAGCGCCGAATCGGCGCGAGTCAAAACCCAGCTGCAGACAAGGACG
AAGCTGTTAAAAAGGACGGAAGCCGAGAAGCAGGTAAGTGCTGCGACAGC
GTCTCAAACGTTCTGATTTCACCTTCCATTCCCCTCTGCACGACTCTCCC
TGTGTTGTAGAGTATTCAGTAGCACACTACTGTACATATCATGGACACGT
TCAACTTTCGCCACGTGGACATTGAAAGAGCAAGTAAACCTCTCGCCCCC
CGCATACCGTACACCGCGCTCGTCTACAGATGGCACGCTCGGCCTGCTAC
GAGTACCAGCTGGAGGGAATCCACAACCGGCAAGACGCCAACAGGGCGAG
CATGGCGTTGGCGCAGGCCGAGCACGACTTGCAGAAAATGACCGAGGTGG
TAGCCCGGTTCAACGTCCAGACCCAGGTAAGTGCTGTGACAAGAGTCTCA
CACGTTCTGATTTGTTGCGTTGTTCAGCTCAGCAGAAACTAGTCATGAAG
CCACATATTGGTACACTGTGTACATAGGCATGTTTCGTTACCCCTGATGA
TCTCCTGGCGTCGTTTGTCGCCGGCCACAAATCCCCCTGCCCGCGCCCCC
AACCTTCCAACCCTGCCCTACAGCTCCAGCGCTTAGGGATGCTTTCTCTA
AACGCCGCATTGATGAAGGAGGAAGTAAAGACGGAAAAGGCGGAACGTGA
CATGGCTACTTGTCGTGCAAAATACGAGGTGCGCGCACGCTCTGATACGA
AAAGTATCTTACTGCACAATGTAGAAGGGAGCCGCACGCACGACAGACAC
CGATTAACTGGCCCTCATAGAGCACAGCCGTGATGATCAGACGATACGGT
GGTGAGCATGATTTGTGCATCTCTCGGTGAAACTTGTACAGTACAACTTT
GCATGACTGATGTGTAGACTAGTCTATGCTAACAGCATGCTCCTCTACGC
ATAGTCTAAGCTACAATGTCTTCCCCCAGTGTTCAAGGTTGCAAGAAACA
CTCCACTCTTCACCCTTTTCCGGCGCTTGTCAGGAATGTCGGTCCTCGCT
GCAGTCGGCGAGGGAGCAGATGGCGAGGGATTCTGCTCAGACGGAGGCGG
TCGAGGAGGCTACCCGCAAGGCAGCAACGCAGGGGAAAGAGACGGGGCCT
CAAGCCCAGCAGCAGCTTGTTGCCGAGGGTTCGCACGCGTCCACGGCCAG
CGAGCTGGACGAGGAAGGGTTCGGCCTGCGGCACATGGAGGAGGCGATGC
TTCGGTCCATGGAGGAGGTCAAGCAGGACGGGAGGTGTGACCCGCGACAG
GGGAATGTTTCATCAGCACCGTGGGCCAAGGCGACAGCAGCACCGGGTAA
GTACATGCATTGTTGCTCGAAGTATGAATATCGCAACCGACCTTTGTAGG
CTCAAATCACACCTTGTCGCCAAGGGGCCCTGAACGCAGCTCCCTGATAC
TGTGGGGTATCCACATACTGCTCTGTTAGCGGTTTGGCGATGTAGACGGG
CAGGCGAGCACCTGTCGTACGTAGCGAAGCGAGTGAATCATTCAACGTAC
TCAAGAGTTCTCGACGGAATCTAGGAAGATACCGTTTGTAACGAGGCCGA
CCGCAGCCACCAGTGTGCCGTCGGAGTCAAACATGTGGCAGAACGCCCTG
TAGCAAGATTGGCCTGAGCATGATCGGGCTCTTTAGGCAGCAGCATCGTT
AGTGCCCTCACCACCGTCGGCCAAGTCATTGTGACCAACCCCTTCGCCAC
CCACCCGCTTCTTCCCCGATGGTGCCAAAAGCGAGGAGGAGGAGGGAGAA
GAAGAAGGAGCCCCCCCCCACAGCGTCAACCAACCGGTGGGCAGTTTTCG
CCGAAGACGAGGATGACGACGACGAGGACGAGGGCAAGGGAGCAGAAGGT
GAGCTCTCTGCTAGGTACTACTGCAGTAGATGCAACTATCTCAGGTAGCA
GGACCATCCCCTCGACCCTTCACGTCCCCTTCCTGTGGTCGGCGAAAGTC
TTGCGGGTTCCGCCCCGGGTTTACGAGGGTCACGACGTTCCCTGCAGCCT
GTGACGTGAAATCTACTGTAGCTATCCATTTTCGTGATCAAGAACAAGTT
CCTCATCATTCGCCCTCTCTCCTTCACCCGGTTTTTCCCCACGCCAAACG
TTGCAGGAGCAACGCCCGCCGACGCCACGCCCGCCACGTCGCCCCCCGGC
AGGGGCCGAACCCGCGGCAAGTCGCCGAGCCCGAGTCGCCGACGGGCCAA
CAATGGACGCCAAGACTCCTAGTCCGACAGGGCAGGCCGTCTTGCACACA
CCGGGCTGTGCACAGGATGCAAGGGGCCTCGGGTTTGCACTTTCTGCAAT
ATTCTGCCGCGCGAACGCTTGGCATTTCGAGGAGACGAGAGCCCATGTGT
CGCTGTGTAGAAGTAGGTCATGTACCATACGTACTGATATCTGTGTCAGA
AGAGAACTGAAGGGTTTGAAAAAGATCTCACCTTTCATCCATACTGGTAC
GCGTGGATAGCCCTGTTAGAGTGATGTGCCTTGGCAGACAACCAGCTTGC
TCCTGTTGGTATTGGTCGCGTGGCGTAAAGAGGGCTCGCGTCAGGGACTG
AGAACCCACGGGCTGGGGCCAAGAGTCAACTCCATTATCTGATTCTTTCG
CTGCCGGCACTACGACGGCCATTCACCGTACATGCTGCTCCCAAGCATGA
AGTGTCGAATTCATCAGGCA
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Coding sequence (CDS) from alignment at chr_00:1733534..1737553+

>Ec-00_001520.1 ID=Ec-00_001520.1|Name=Ec-00_001520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1248bp|location=Sequence derived from alignment at chr_00:1733534..1737553+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGGCATGTTTTCGCAGGCGAAGGTCCTGCTCCCGGGGTACCGGCG
GGCGGCGAAGGAGTTGGCAGAACGCCAGCAGCTGGAGTTAGAGTTCGCGG
CCTACAAGTGGAAGATGGCCGTGGGGGGCGTCGCCTTCACGGTCTTGATC
CTGATCCTGGTCCTGAGCATGGTGATACTGCTGCGGTGGTGGGGTAAGCA
CCAAGCGGACCGTGAGTCCGCCCTGGTGCGCACCGTTGAGGAATCAAGGG
CAGAAACTGCTACAGCCAACGAGAAGACAACGCGTTTCGAAGCCCAGAGA
GACACGGCACGCTCAGCCTGCTATGAGTTCCAGCTGGCTGTTGTCGAGAA
CAGGGCAGACTCCCACAGGGCTAGCGCCGAATCGGCGCGAGTCAAAACCC
AGCTGCAGACAAGGACGAAGCTGTTAAAAAGGACGGAAGCCGAGAAGCAG
ATGGCACGCTCGGCCTGCTACGAGTACCAGCTGGAGGGAATCCACAACCG
GCAAGACGCCAACAGGGCGAGCATGGCGTTGGCGCAGGCCGAGCACGACT
TGCAGAAAATGACCGAGGTGGTAGCCCGGTTCAACGTCCAGACCCAGCTC
CAGCGCTTAGGGATGCTTTCTCTAAACGCCGCATTGATGAAGGAGGAAGT
AAAGACGGAAAAGGCGGAACGTGACATGGCTACTTGTCGTGCAAAATACG
AGGAATGTCGGTCCTCGCTGCAGTCGGCGAGGGAGCAGATGGCGAGGGAT
TCTGCTCAGACGGAGGCGGTCGAGGAGGCTACCCGCAAGGCAGCAACGCA
GGGGAAAGAGACGGGGCCTCAAGCCCAGCAGCAGCTTGTTGCCGAGGGTT
CGCACGCGTCCACGGCCAGCGAGCTGGACGAGGAAGGGTTCGGCCTGCGG
CACATGGAGGAGGCGATGCTTCGGTCCATGGAGGAGGTCAAGCAGGACGG
GAGGTGTGACCCGCGACAGGGGAATGTTTCATCAGCACCGTGGGCCAAGG
CGACAGCAGCACCGGCGAGGAGGAGGAGGGAGAAGAAGAAGGAGCCCCCC
CCCACAGCGTCAACCAACCGGTGGGCAGTTTTCGCCGAAGACGAGGATGA
CGACGACGAGGACGAGGGCAAGGGAGCAGAAGGAGCAACGCCCGCCGACG
CCACGCCCGCCACGTCGCCCCCCGGCAGGGGCCGAACCCGCGGCAAGTCG
CCGAGCCCGAGTCGCCGACGGGCCAACAATGGACGCCAAGACTCCTAG
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Synonyms
The feature 'Ec-00_001520.1' has the following synonyms
Synonym
Esi0013_0110
Esi_0013_0110