Ec-00_001510.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001510.1
Unique NameEc-00_001510.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length297
Homology
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BLAST of Ec-00_001510.1 vs. uniprot
Match: D8LEA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA5_ECTSI)

HSP 1 Score: 494 bits (1271), Expect = 2.800e-171
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 
Query:  157 MDEEGGEEDLLSGVLSLSLTEAHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTRTKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHFFA 888
            MDEEGGEEDLLSGVLSLSLTEAHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTRTKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHFFA
Sbjct:    1 MDEEGGEEDLLSGVLSLSLTEAHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTRTKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHFFA 244
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BLAST of Ec-00_001510.1 vs. uniprot
Match: A0A836CFQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ5_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.510e-49
Identity = 93/225 (41.33%), Postives = 133/225 (59.11%), Query Frame = 1 
Query:  211 LTEAHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTR-TKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHF 882
            L     D K YE+N+H+TM     LR+ R  +   +F L+   D AR RR+KV + F    ++ N  + G + E +H+ LV IDE REL+D+L SW  +CLPAN+   + SHR K++ F+ ++ NE+K     R+ V    + RV T+R +F TK+VA  NL GWE AH ELL +QE+ AYL M R W   ++S LL+Y YW +NLK   I F      +G+ +F
Sbjct:   35 LVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYF 259
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BLAST of Ec-00_001510.1 vs. uniprot
Match: D8LE75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE75_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.360e-48
Identity = 97/230 (42.17%), Postives = 136/230 (59.13%), Query Frame = 1 
Query:  196 VLSLSLTEAHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTR-TKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHF 882
            +L  SL  A  D K YE+N+H+TMA  P LR++R  DY  +F L+D  D AR RRRKV ++F    +++N  + G+I E S + L+L+DE REL+DRL SW  +CLP ND   + SHR+K++ F+ ++  E+K               R ++ RS    ++V   NL  WE AHH+LL  QE  AYL M R W   ++S LL+Y YWKVNLKD +I F       G+ +F
Sbjct:    1 MLQRSLG-AETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMK---------------RSNSARS----QEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYF 210
[Close]
BLAST of Ec-00_001510.1 vs. uniprot
Match: A0A836C7X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X8_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.460e-39
Identity = 84/213 (39.44%), Postives = 118/213 (55.40%), Query Frame = 1 
Query:  229 DPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFMTRTKENLN-RAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNG 864
            D K YERN+HETM  LP LR+    DY    TL   +D+A+ RR KV  FF     E  + +  Q+ + S + L ++DE REL++ L++W  +CLPAN+   + + R K++ F+  L   V  L    + V      R  T++ +F TKDV   N  GW  AH +LLV  ET AYL M + W   ++  +L + YWK NLKD D+AFA    G
Sbjct:   24 DIKVYERNIHETMQELPKLRDACEQDYTKCVTLFSTDDSAKDRRTKVFAFFDANITEATSYQTDQVFKLSEEVLSVLDECRELLELLMNWCDLCLPANETAFAEALRIKIQDFQEYLSGGVTGLANSTNEVNLQLEKRARTLQLLFTTKDVLPENRAGWIKAHRDLLVHCETNAYLRMAKIWEKVLEDYVLYFNYWKTNLKDGDLAFAHMGKG 236
The following BLAST results are available for this feature:
BLAST of Ec-00_001510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEA5_ECTSI2.800e-171100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFQ5_9STRA1.510e-4941.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LE75_ECTSI1.360e-4842.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7X8_9STRA5.460e-3939.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1721746..1728956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1723
Hectar predicted targeting categoryother localisation
Gene idEc-00_001510.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001510Ec-00_001510Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1721746..1728956 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001510.1Ec-00_001510.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1721746..1728124 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001510.1.1Ec-00_001510.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1721746..1721982 +
Ec-00_001510.1.2Ec-00_001510.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1722924..1723000 +
Ec-00_001510.1.3Ec-00_001510.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1723338..1723389 +
Ec-00_001510.1.4Ec-00_001510.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1724220..1724257 +
Ec-00_001510.1.5Ec-00_001510.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1724884..1724939 +
Ec-00_001510.1.6Ec-00_001510.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1725782..1725888 +
Ec-00_001510.1.7Ec-00_001510.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1726412..1726459 +
Ec-00_001510.1.8Ec-00_001510.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1726974..1727030 +
Ec-00_001510.1.9Ec-00_001510.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1727547..1727609 +
Ec-00_001510.1.10Ec-00_001510.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1727969..1728956 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001510.1CDS:Ec-00_001510.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1721746..1721982 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0015103UTR:Ec-00_001510.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1728125..1728956 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001510.1 ID=Ec-00_001510.1|Name=Ec-00_001510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=297bp
MSVTTIGCGCKIEPARSLVPRWIILRSPQEGAWDAYACVAQVACGKGPEQ
QTMDEEGGEEDLLSGVLSLSLTEAHGDPKTYERNVHETMAGLPGLREKRL
ADYESIFTLVDANDTARARRRKVLDFFMTRTKENLNRAGQIQECSHQCLV
LIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILE
GLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAY
LSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHFFA*
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spliced messenger RNA

>Ec-00_001510.1 ID=Ec-00_001510.1|Name=Ec-00_001510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1723bp|location=Sequence derived from alignment at chr_00:1721746..1728956+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGGTCACAACGATTGGATGCGGATGTAAGATAGAGCCCGCCAGGAG
CTTGGTACCCCGGTGGATAATTCTGCGGAGCCCCCAGGAGGGTGCGTGGG
ATGCGTATGCATGTGTCGCCCAGGTCGCGTGTGGCAAAGGTCCAGAACAA
CAGACCATGGACGAGGAAGGAGGAGAAGAAGATCTCTTGAGTGGCGTTCT
TTCGCTGTCCTTGACGGAGGCACACGGCGATCCTAAGACATACGAGAGAA
ATGTGCACGAGACCATGGCGGGGCTCCCAGGCCTGCGGGAGAAGAGGCTA
GCGGACTACGAGAGCATCTTTACGCTTGTCGACGCAAACGATACTGCAAG
AGCTAGGCGAAGAAAGGTTTTGGACTTCTTCATGACCCGCACGAAGGAAA
ACCTGAATCGAGCGGGGCAGATCCAGGAGTGCTCTCACCAATGCCTGGTG
CTGATAGATGAACTCCGAGAGCTGATGGACCGCTTGATCTCCTGGCTGAC
GATGTGCCTGCCAGCGAATGACCACCCTCTGTCCGTTTCCCATCGCCGCA
AGCTCAAGCTGTTCAAGGGCCGGTTGCGGAACGAAGTGAAGATATTGGAA
GGACTTCGGTCAGGGGTCACTTCTGCGCATTCCGGCCGTGTGCACACCAT
CCGATCTATGTTCCTCACGAAGGACGTTGCCGAGAACAACCTGCTTGGCT
GGGAAACCGCCCACCACGAACTTCTTGTGATGCAGGAGACGGAAGCGTAC
CTGTCGATGTGCCGCTTCTGGATGTCGACGATGGACTCGGCCCTCCTGGT
GTACAAGTACTGGAAGGTGAATCTGAAGGATGCCGACATCGCGTTCGCCA
CAGGTAACAACGGCAACGGGCACCACCACTTTTTCGCATGACACGGATCA
TGCTGTCCACCGGAAAGCCCACAGCGGCGGGGAACGCCTCTGGGCAGGTG
CAGGGGGTTTCTCTTTCAGCTGATTGATTCCGAGTGCAGTTGTTCTCGCG
ACCTCTGGGAGACGAATACCTACCGCACACGCGTTGGGTTGACCGCTGAG
GTTCACGAGTTCTGGCCTATCAGGGCGTGGACTGTGTGAAGGAGAGGCGG
GGTCGATAGGCCACACACAGCTTTGCACCTGATCGTAGTTGGTGTCGTTG
GCTTCTAGAGTACGAAATTGACTTCGGGTGTTATCGGCTTCTAGAATACG
AATATGACGTCGAGTCTGTTTTTGTCGTGCTGAATTGAAGACCGTTGTTG
GAGCACGTGGTTCGGGCTGATATTTTCGTTCGTGACTGAATCGAAACGCA
CATGTCCTGTGCCCTATCCACTCCCCCTTTTTGTCACGGTTTCAGAAAAT
AATGTGGTATTTACGATAGTTTTCATCCTCCTCCAATCGACAAGGTGAGG
ACCAATGGGCAGTATTGAAAGTAGCGAGGCAACGAGCCAGTGTCGTCTGT
TCGTAAGGTATTATGGCTTTCATCGACTCTATCGGAAATAGGATGTGATT
CGCTTTCTTTGTCTCTTGGCGCGTGGATGAGTCGGCTTCATGCCACCATT
ATCTTTCGGCCGCGGTGATTTTTTCTCCAATTACTGTTGCCACTATTGCT
TGATTCTACATATACTGTTTGTTGCACTGCCGCCTTCAGCGGTCTGTGGT
GTTGAGACTGGGTACTACGTTATCCCAGGAACAGCAGGTGAAGAAAAGGA
CCATGTATTATATCCTACACGCA
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protein sequence of Ec-00_001510.1

>Ec-00_001510.1 ID=Ec-00_001510.1|Name=Ec-00_001510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=297bp
MSVTTIGCGCKIEPARSLVPRWIILRSPQEGAWDAYACVAQVACGKGPEQ
QTMDEEGGEEDLLSGVLSLSLTEAHGDPKTYERNVHETMAGLPGLREKRL
ADYESIFTLVDANDTARARRRKVLDFFMTRTKENLNRAGQIQECSHQCLV
LIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILE
GLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAY
LSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHFFA*
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mRNA from alignment at chr_00:1721746..1728956+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001510.1 ID=Ec-00_001510.1|Name=Ec-00_001510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7211bp|location=Sequence derived from alignment at chr_00:1721746..1728956+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCGGTCACAACGATTGGATGCGGATGTAAGATAGAGCCCGCCAGGAG
CTTGGTACCCCGGTGGATAATTCTGCGGAGCCCCCAGGAGGGTGCGTGGG
ATGCGTATGCATGTGTCGCCCAGGTCGCGTGTGGCAAAGGTCCAGAACAA
CAGACCATGGACGAGGAAGGAGGAGAAGAAGATCTCTTGAGTGGCGTTCT
TTCGCTGTCCTTGACGGAGGCACACGGCGATCCTAAGGTGAGATTGGTCG
TGGGGCCCAGAACACATCCATCCTCTTGGATCCAGGTTTCTCCGACATAC
GGTACCTAGACTATGCATACGCAAGAGCAGGTTCGTACATGGTACGTGTG
ACAACAACACCGATTATAACACGAATGGTTGCACAAGCGTAGTATGTAGG
GTAGAATCTTCATGCAGTCCTCCACGTCCGACCCTTACTTATTTGCTGTG
TTGTTGAACAGCTGCACGCGCACATCGGTCTTGCACTGGCTCCAACTTGT
TACACAGATTCAGAGGAAGGTTGAACAACGCATCCCAACTGCTGTGCATA
GCTTTCCTAAGATATGCTTAACACACGCCTTGAACCGAGTTTCAACGCTC
GATTACTCAGCAGCAAAAACAGACACGATGCCGACAATGATGGCGCGGGA
ACCCCGTCGTCAAAAACTTTCCAAACACGTCGTGTGATTTTGGCACCCTC
TTCGTCGTGAACTATCGAGCTTTGCAAAGTCGGTCCGGGGGTGTGGTATC
TTATGCAATCCTTGTGTCGGGACGTCGGGACCTTTCGCATGCGCCCCACC
GGACGAGGCAGGAGGATATGCATGTTCGTCTCTCTCTATTACTTCTCAGC
CTTAGGAATGCCGGCCGTCACTATAATAGCTCCCTTCAATCGCTCTCTGC
TGAGGTCAGCAAATCTTGCGTCGGAAGTGTGGGGGCTACAGAGTAGGTTA
TCACAGCATCAGGCCCATCACAGCAGTAGCCCGTCCCCAGAGCCCGAAGT
GCTCGCCAAAACTCCCGGTCGCCTTCTCGGCCCTCACTAGTTCTGCAGTG
GTGTGGTCAGTCGGGCAAATGTACATGCGCCGAGAGTGCAAAGCTAGAGT
ACGATGTACTACACTGCTGTCCCTTCGACGGCTGCGCAAACTTCAACCTG
GGCGTGACCAACTTGCTGCTGTTGGCAGACATACGAGAGAAATGTGCACG
AGACCATGGCGGGGCTCCCAGGCCTGCGGGAGAAGAGGCTAGCGGACTAC
GAGAGGTATGCAGCTCTAGCTCGTCTGGCTTTGATGGGAGGTGACGGATG
TATTGCGCCTTCTTTCGACAACACCAAGTGCACAATAAGTGTCATCTTTT
CCACGTTGTTGTCCCCGTATCGCCAGATGTTCGATGGAATGATACCCGAT
CTGTATGCAAATCAAAACACACGAGAACACCCACCCCGTCCGATCACCTC
CCCCGTTCGCGTGAGTTAGCTATCCGGCGTTCCCCTCCTCCCTCTAGTTG
TTCTACACTCCTCTCCTTCTCCGGTTAAGGACCCTACTCCCCATCTGTGT
TCGATCCATCCGGTCGTTTGTTGGGTTCTCGCCTGCCGGCAGCATCTTTA
CGCTTGTCGACGCAAACGATACTGCAAGAGCTAGGCGAAGAAAGGTGAAA
GAACAATGTAGCAGCTGCTCTGGTGCTGGCGGCCGGTTTGGAGAGGATGG
AGAGTGTCTGCTGCTTTGGTTTATGCATGCGATCGACAGGGCCAGGCCTG
TATCGCGTGCGGGGTTGTTGGCTGGCGTTTTAACATTTTGGGCTTGTGGT
TGAGGTGCTGGCGACGACGGTCAGGGGAGCTTGCAGCGTCTGTTGCCGCG
CGCATCATGGCATTCAGATTAGTTTGGATGCACGTCGGAGCCAGCTGTTG
CTCCATGCGCAAGGGAAGAACACCAACCTTGTTCGATGCTAACCTAGCGT
ATTCAAGCTTTGGCGTGTCATGTCGCGCTGAAGGGCAGCCGTTGGTTTTT
CCGGATGTTTGTCTTCGCCTGCTACGACAGCTTTGAGCAAAGTGGAGGGA
TGGATTTTGCCTTGCGTACGGTCGTAAACGGTACATATACCGGCAAGGTG
AGGCACGTGGTGTCAAGGCATTCGTGGTAATTAGTGCGCTGGGCTCGCTG
GCGAGGTGTTCCGTGCTACTCGTCGACTGCTCTTCTCTTGCACGGTACCA
CGGCCGTGCACTGCGAACTCCCCTCTTGTCTGTAGTGGCCGTCTGTGTCA
CCAGAGTGCGCTTGCTCCACGTGAGGTGGGAGCCGTAAAGAGTCTTCGCG
TAGGCCCTGCAACACTGTGCTTTACTCGTCACACCCACTCGTGTATCCGA
AGGTCACGACATTCTGCTTTGCCACAGATAGTTTTTTTATTGCCGATGTC
GTGGGTTTTTATCGATGTTTCGGGTGTGCTGATTTGTCGCTTGCGGTCGC
CGTCGCTTCGTTTGTTGCCGACAGGTTTTGGACTTCTTCATGACCCGCAC
GAAGGAAAACCTGTGAGTGCAAGCATTTTTCCTAGCATGCTGGACGTTCA
TTTGCTCCTAAGCGGGAGTGAGCAGCTATCGCGCAAATACACAGCATCGC
ACGCACCTAGTTCGAAGCAGAACGGCGTACAGGTTGAGGTGGCAAGCAGC
CTGAATATTTTTGTTTACCGTCGAAGAACGAAGGCAGTAGGCTCATTGGC
AGATATGTCTTGTTGACAATTCATTTTGCAAGAAGCAGCGAAGATCATGG
CTGGCCTTGCAGGCCATATTAACTTCTACCATATTTTCGCTATTTCGTTG
CGATTTGTGCTCGTCCTAGCCAACATCACGTATGTGCGCATTGGATGCAC
CGCTACCTGCTACCACGTGCGCCCCCCCTTCTCGTAACGTGGCATTCCAA
CTCCTCAAGTAGTGGACTTACGGGCAACCAACTTTCCCTCGGGAGATGGA
AATATTGGCTCTCTATACCTCGGTCCTCCAGCTATTTGAGTGTCGTGTTT
TTGTTGGCATTTTTTCAGGATTAGGTTTGCCTTGACCTGTGTCGTACTCG
ATGGCTGGCTGCATCATGTGTATCATATGTCTCGTTCCCTTTATCTTTCT
CTTCATTTGTTTGGGTTTATTGACCTCATCATGCGCAGGAATCGAGCGGG
GCAGATCCAGGAGTGCTCTCACCAATGCCTGGTGCTGATAGATGGTAAAT
TTTCGGCATCGTTGTTCTTGTTATTCTCTTTGAATGCGTCGCGGCTTTTC
TTGTGTTTCTCGGTACGATTGATTGCGTGTGTGGGCGTTACTCGAAGGCT
GTCGCGCTTGTCGCCCACCGGTAACGGAGTACAACCGCGGTAACACTGGT
TGATCCCTTCTTGCGTAGTCGGTGTGCAGCGTTACGTCACATCCCGTTGG
CTCTCATCATCAGGACCAAACTTCCGAATACCATATCATGGAATAGGCTG
CCGTGAATGAGACGTACATTCAGTCCGACTCAGAAAGAGCGCAAAGCACG
TATTGCCGGTCTGGATACAACCCATTAGGGTCTTGCTTGGACTTGACAGC
AGTACGCGACGGATAGCCTATTTTTGCTTACTCCGGTGGCCGCGGTTTCG
CACCATTTACTCGTAGCTGTATTCTTGTGGTGTCGCACATCTGCGTTACC
ATGCGAAGTGGATTTAAACCTAGCCGTGTGGTCCTGCCATGTGTTCCCTT
TGTTGATCGTGGCCAGCGGGCCCTGTGGCCGTGGAAACAGCGAGGCGTTC
CTCTCTTGAATCATGCACCATATATGGATTTGTTTTTCAATTGACGGGGG
GTGAAGATATGAGCCACCCCGGGTTTCCCGCAAAAGTCACAAGTATTGAT
GCGCGCTGCAGACCAGCGTCAAGAGGAGCGCGTTCTGCAAGTACCTTTGT
GGGTCTTCCCACACGGACGGCGCCTCGTCGTGTGACATGATGTTGCGCGA
GCCCCCCCTGCCCAACCATACCGCCCCCCCTACCGTTGTTTGCTTTGTTG
TGTCGTGGTTCGATTTGTTTCATGCTTGATGGGCAGAACTCCGAGAGCTG
ATGGACCGCTTGATCTCCTGGCTGACGATGTGCCTGCCAGCGAATGACCA
CCCTCTGTCCGTTTCCCATCGCCGCAAGCTCAAGCTGTTCAAGGTATCCT
GCTTGTTCATGCGCGTAGTGTAGTTTTTCTTGTTTTGCTCGTGTCTCAAC
CAACCCACGTTGTGAAATAAAACCGACTGATACGTTTTAGACTGAGCGGC
GGCAGTGCGTGTGTTGCGTTGAACCTGGTTTTGTTTGGGAAGGGCGGGAG
GGAGTTTCAATTCTGAATCGTCGACGGGCAAGTTGGGGGTATTTTTCTAG
GGGGAGCATTGTGGCTTTGGTTTTGTTAGGGGTGAGCGACACTGGCCGCG
AACGATTTGTTTTTCTCCCGTTTCCCAGTGTGAGCTAGAATCATTTTTCG
ACTGCTCATGGTACTGCTGCGAAGGGTACTGCGGCTGATGGTGCTACTGC
TACTGTTGCTAATGTTCCCGATGGTGCTACTGCTACTGCTGTTGCTGCTG
CTGGTACTCGTTTGCTGCTGCGGTGCCCGACAATCGGCTGCGGGGACAAC
GGTGGTGGTCTTCGGGGCAACATGCGTAACCATGGGCGTTTCCAACATTC
CCGTTGCTTGTGGTAGGGCCGGTTGCGGAACGAAGTGAAGATATTGGAAG
GACTTCGGTCAGGGGTGAGACATTAGAAACATCAACTTCATCCAAAATGT
TTCCATGTCCACATGCTGCCGTTACAACATTGTACTGCACGATCTGAGGT
ATCACAGCTGCATGCTCACATTGTGGTGGTCTAGATCATTCACTCACTTT
GCTTGTGATATCTGTTATACGGTGGGCGGGTGTTTTCTCTCCACGTTTGG
CGCCACCAGCATGCGGTTCGTCGTGGTCGACGTCGTCGACATGACGTCAT
TCATTCGACTGATTTGATATGACGTCAGTCACTTGAGTGATGCTTCAGTA
AACTCTATTGCCTGCCGCTGCCCCCCACCTCCCATTCGTGCGTTACCGCT
CTATTATGATTGGCCTCGGTGGCGCCTTGGGTCAGAAAGGGCGTATGCGG
CGTCCAAGACTTGGCTACCGCACTGCTCGTTCCTGCGCTCACCCGCGTGT
GAACTGACGTTATCCAACTCGACCGTGGTATTTTGATTCTGTCCCTTACC
CGCAAACGATATGGCATGATATTGATAGGTCACTTCTGCGCATTCCGGCC
GTGTGCACACCATCCGATCTATGTTCCTCACGAAGGTGAGATAGCAGCTG
ATCGATTCTCGCGTTCGTTTTGTATTCGATAGGACAACCCCTGCCTCGAA
GACAATGCGCCCGGGCGATGGAGAAAAAATTAATTGTGGACTACCACCGT
GAGGGAGACACGCGCTGCTTTGCGCTCATTTTAACCAAGGCACTATTTTC
ACTGTGGGGAGTTCCGAGACTATCCCAAGGTCGATCAAGTAGCGATTCTA
CCGTGCCAGCCGGTGGGTGTGCTACGCCGACTAGAGGACTCCTCCTGCTC
CCCGCCGGTCGTGGCTGCACCGAACGCCAATTCGAGTGTCGGTTCTCCTT
CATTCACAGAACGTTCATTCACATTTCGGTGTTTCATTCATTCGTTCTCA
GGTCTGGGGGTTCGGTGTTGGTACTCGACATTGTTGCTTGCCCCCGGTCT
ACCCTTTCCGCCCATTGTTGCCCCCGTCCACTAACGTCACCACGGTGTGA
CTGTCTGTATCTGTGATTATCGCTGCGGGCGGTCTCGTGCATGGCGTTCA
GGACGTTGCCGAGAACAACCTGCTTGGCTGGGAAACCGCCCACCACGAAC
TTCTTGTGATGCAGGTATTGGTTGAGAAGTACAGCAGTATACCCTGGATC
CGTGCGCGACATCAAGACAAATCGTTGGTGGTCCGCATGGGAAGGCGGTG
AAGAAGGCCGGGATTTTAAATGCAAATATTGTTGTTTTGGTTTCTTCTAC
TTCCGTGCCAAACCGTTTCTGCGGTACGAGTGTGCAGCAGCAAGTTCGAC
ACATATTTGAATGTTGTCTCGGCGTCGAGGCTAAGGCTCCGACATTTAGC
ACGGTCACTCGCTTTTCTGGTCGTTTTTCATTCGTTTTTCGAGTGGGTTT
CCATACCTTCCTCTCCTCTGTCTTTCCCGCGTGCGCATGGAAAACGTTTG
TCACTGACTACATCAACCCGCAGGAGACGGAAGCGTACCTGTCGATGTGC
CGCTTCTGGATGTCGACGATGGACTCGGCCCTCCTGGTGTACAAGTACTG
GAAGGTGAATCTGAAGGATGCCGACATCGCGTTCGCCACAGGTAACAACG
GCAACGGGCACCACCACTTTTTCGCATGACACGGATCATGCTGTCCACCG
GAAAGCCCACAGCGGCGGGGAACGCCTCTGGGCAGGTGCAGGGGGTTTCT
CTTTCAGCTGATTGATTCCGAGTGCAGTTGTTCTCGCGACCTCTGGGAGA
CGAATACCTACCGCACACGCGTTGGGTTGACCGCTGAGGTTCACGAGTTC
TGGCCTATCAGGGCGTGGACTGTGTGAAGGAGAGGCGGGGTCGATAGGCC
ACACACAGCTTTGCACCTGATCGTAGTTGGTGTCGTTGGCTTCTAGAGTA
CGAAATTGACTTCGGGTGTTATCGGCTTCTAGAATACGAATATGACGTCG
AGTCTGTTTTTGTCGTGCTGAATTGAAGACCGTTGTTGGAGCACGTGGTT
CGGGCTGATATTTTCGTTCGTGACTGAATCGAAACGCACATGTCCTGTGC
CCTATCCACTCCCCCTTTTTGTCACGGTTTCAGAAAATAATGTGGTATTT
ACGATAGTTTTCATCCTCCTCCAATCGACAAGGTGAGGACCAATGGGCAG
TATTGAAAGTAGCGAGGCAACGAGCCAGTGTCGTCTGTTCGTAAGGTATT
ATGGCTTTCATCGACTCTATCGGAAATAGGATGTGATTCGCTTTCTTTGT
CTCTTGGCGCGTGGATGAGTCGGCTTCATGCCACCATTATCTTTCGGCCG
CGGTGATTTTTTCTCCAATTACTGTTGCCACTATTGCTTGATTCTACATA
TACTGTTTGTTGCACTGCCGCCTTCAGCGGTCTGTGGTGTTGAGACTGGG
TACTACGTTATCCCAGGAACAGCAGGTGAAGAAAAGGACCATGTATTATA
TCCTACACGCA
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Coding sequence (CDS) from alignment at chr_00:1721746..1728956+

>Ec-00_001510.1 ID=Ec-00_001510.1|Name=Ec-00_001510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=891bp|location=Sequence derived from alignment at chr_00:1721746..1728956+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCGGTCACAACGATTGGATGCGGATGTAAGATAGAGCCCGCCAGGAG
CTTGGTACCCCGGTGGATAATTCTGCGGAGCCCCCAGGAGGGTGCGTGGG
ATGCGTATGCATGTGTCGCCCAGGTCGCGTGTGGCAAAGGTCCAGAACAA
CAGACCATGGACGAGGAAGGAGGAGAAGAAGATCTCTTGAGTGGCGTTCT
TTCGCTGTCCTTGACGGAGGCACACGGCGATCCTAAGACATACGAGAGAA
ATGTGCACGAGACCATGGCGGGGCTCCCAGGCCTGCGGGAGAAGAGGCTA
GCGGACTACGAGAGCATCTTTACGCTTGTCGACGCAAACGATACTGCAAG
AGCTAGGCGAAGAAAGGTTTTGGACTTCTTCATGACCCGCACGAAGGAAA
ACCTGAATCGAGCGGGGCAGATCCAGGAGTGCTCTCACCAATGCCTGGTG
CTGATAGATGAACTCCGAGAGCTGATGGACCGCTTGATCTCCTGGCTGAC
GATGTGCCTGCCAGCGAATGACCACCCTCTGTCCGTTTCCCATCGCCGCA
AGCTCAAGCTGTTCAAGGGCCGGTTGCGGAACGAAGTGAAGATATTGGAA
GGACTTCGGTCAGGGGTCACTTCTGCGCATTCCGGCCGTGTGCACACCAT
CCGATCTATGTTCCTCACGAAGGACGTTGCCGAGAACAACCTGCTTGGCT
GGGAAACCGCCCACCACGAACTTCTTGTGATGCAGGAGACGGAAGCGTAC
CTGTCGATGTGCCGCTTCTGGATGTCGACGATGGACTCGGCCCTCCTGGT
GTACAAGTACTGGAAGGTGAATCTGAAGGATGCCGACATCGCGTTCGCCA
CAGGTAACAACGGCAACGGGCACCACCACTTTTTCGCATGA
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Synonyms
The feature 'Ec-00_001510.1' has the following synonyms
Synonym
Esi0013_0109
Esi_0013_0109