Ec-00_001460.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001460.1
Unique NameEc-00_001460.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length355
Homology
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: D8LEA1_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA1_ECTSI)

HSP 1 Score: 631 bits (1628), Expect = 2.640e-215
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 3 
Query:  129 MAAMTGGASAMETGAAAPKSTAVGTEEIDFAVEAENRGMKLVSSTREENGGVVLTLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXXXXXXXDDEKAKRSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAISDP 1190
            MAAMTGGASAMETGAAAPKSTAVGTEEIDFAVEAENRGMKLVSSTREENGGVVLTLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXXXXXXXDDEKAKRSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAISDP
Sbjct:    1 MAAMTGGASAMETGAAAPKSTAVGTEEIDFAVEAENRGMKLVSSTREENGGVVLTLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXXXXXXXDDEKAKRSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAISDP 354
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: A0A835ZBS4_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS4_9STRA)

HSP 1 Score: 249 bits (635), Expect = 8.570e-71
Identity = 140/292 (47.95%), Postives = 178/292 (60.96%), Query Frame = 3 
Query:  318 FTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXXXXXXXDDEKA----KRSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAI 1181
            FT+   PG G F  ST   FL D L++ENLEE  + A  ++ V+  A  VY CI+G                         D E A    +++    +    +ED D   ++ G A +          ANTRLMRDLSRLMR+DT  LGF+L+L +DD L  W + +FGF+DCPLAEDM +L+KE+ L+H+ L MKF +DYP+SPPF  +VYPRF R TGYI+DGAFC ELLT QGWTPTNDIE+V+VQ+R  MV G ARIDF+ T+   PY E  +  AFR AAK H WAI
Sbjct:   29 FTIKKAPGSG-FTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMGMDNVDDTELAAKYAEKAVSANKATGTWEDRDEVPLIGGYACT------YVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETT---PYCERNSLNAFRGAAKQHNWAI 310
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BLAST of Ec-00_001460.1 vs. uniprot
Match: A0A7S3XWH9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWH9_HETAK)

HSP 1 Score: 204 bits (520), Expect = 9.900e-56
Identity = 113/281 (40.21%), Postives = 167/281 (59.43%), Query Frame = 3 
Query:  342 RGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXXXXXXXDDEKAKRSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYI-IDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAI 1181
            +  F V T   FLLD  F+EN+E+  ++A  ++EV+ A ++ Y  I+                          +D KA+   PT++  +  +  D++++  G           A + N RLM DL+++MR+DT  LGFSL+ KN+D++  W   LF F DC LA+D+ +L++ K +D V L ++FK DYPFSPPF+ +VYPRFK  TG++ I G+ CMELLTN GWTPTNDIES+++QIR++M+ G ARI+F       PY E  A++AF   A  H W+I
Sbjct:    5 QSSFSVETSDEFLLDNFFLENIEDAVSEATAVEEVLCAISDTYKDITS-----GNEEGDNSANEDEEYDYGSDEDFKAEPP-PTKDRATKDDWRDVAEIGGGHG---------ATAGNKRLMTDLAKIMRTDTTGLGFSLEPKNEDSMDRWVCKLFNFEDCALAQDLVQLKERKDIDFVELELQFKSDYPFSPPFIRVVYPRFKFHTGHVTIGGSICMELLTNSGWTPTNDIESILIQIRSEMIAGDARIEF---RHDYPYDEAEARSAFTRVASQHGWSI 267
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BLAST of Ec-00_001460.1 vs. uniprot
Match: A0A6B2LKV9_9EUKA (UBC core domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKV9_9EUKA)

HSP 1 Score: 139 bits (349), Expect = 5.060e-34
Identity = 75/166 (45.18%), Postives = 106/166 (63.86%), Query Frame = 3 
Query:  702 LMRDLSRLMRSDTKKLGFSLQ-----LKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYI-IDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAI 1181
            +++DL  + R D+K LGF+ +      KN + L+ W + L+   D PL  D++  +K+  +D+V L M+F + YPF+PPFV +V PRF+  TG++ I G+ CMELLTN GW  TNDIES+++QIRA+M  G AR+D +A    Q YSE  A  AF  AA  H W I
Sbjct:    1 MIKDLKSIKREDSKALGFTAEPRIDPAKNLENLYHWIVKLY--FDGPLGTDLQASQKKFGIDYVELEMRFSEHYPFTPPFVRVVRPRFQFRTGHVTIGGSICMELLTNSGWRSTNDIESILIQIRAEMQGGNARLDLNAG---QSYSEHEAWDAFNRAAGAHGWDI 161
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: A0A1Z5K8B1_FISSO (Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B1_FISSO)

HSP 1 Score: 140 bits (353), Expect = 1.860e-32
Identity = 70/132 (53.03%), Postives = 88/132 (66.67%), Query Frame = 3 
Query:  699 RLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARID 1091
            RL +DL R+M  DT + GFSL    +D++  W I LF F  D  LA+DMK L     +DH+ L M F D YPF PPFV +V PRFKR TG+++ GA CMELLT  GW P NDIESV+V IR+ +VVG  R++
Sbjct:  159 RLAQDLYRIMNQDTSEAGFSLHPTAEDSMKHWTIELFQFDPDSNLAKDMKVLG----IDHIELEMTFPDQYPFEPPFVRVVKPRFKRQTGFVMSGALCMELLTKDGWNPVNDIESVIVSIRSLLVVGDGRLE 286
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: B8C5U5_THAPS (UBC core domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U5_THAPS)

HSP 1 Score: 142 bits (359), Expect = 8.950e-32
Identity = 78/159 (49.06%), Postives = 103/159 (64.78%), Query Frame = 3 
Query:  699 RLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHK 1172
            RL  DL ++M +DT + GFSL+  ++D++ +W I LFGF  D  LA+D+  +     +DHV L M F DDYPF PPFV +V PRFKR TG++++GA CMELLT  GW P NDIESV+V IR+ MVVG  R+     +V  P  ED  K A  +A +  K
Sbjct:  325 RLASDLYKIMMADTDEAGFSLEPCDEDSMDKWCIKLFGFDCDSHLAKDLMVVG----MDHVELEMSFPDDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSIRSLMVVGDGRLQ---AAVDMP--EDAYKTALDAAMERSK 474
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: K0RZ81_THAOC (UBC core domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ81_THAOC)

HSP 1 Score: 141 bits (355), Expect = 9.600e-32
Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 3 
Query:  699 RLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 1088
            RL  DL ++M +DTK+ GFSL+  ++D++ +W INLFGF  D  LA+D+         D V L M F DDYPF PPFV +V PRF+R TG+++ GA CMELLT+ GW P NDIESV+V IR+ MVVG  R+
Sbjct:  250 RLASDLYKIMMADTKEAGFSLEPVDEDSMDKWRINLFGFDEDSNLAKDLMVCGT----DSVELQMSFPDDYPFKPPFVRVVKPRFQRQTGFVMSGALCMELLTSDGWNPVNDIESVIVSIRSLMVVGNGRL 376
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: A0A7S1ZF53_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF53_TRICV)

HSP 1 Score: 135 bits (340), Expect = 1.090e-31
Identity = 67/141 (47.52%), Postives = 96/141 (68.09%), Query Frame = 3 
Query:  669 AKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 1088
            A+S+   +  RL  DL ++M +DT + GF ++ K++D+L  W++ LF F  D  L++D+  L     +D V L M F D YPF PPFV +V PRFKR TG++++GA CMELLT++GW P NDIESV+V IR+ +VVG  R+
Sbjct:    5 AESEKTGSKRRLAADLYKIMMADTDEAGFKIEPKSEDSLDRWSVRLFAFDEDSNLSKDLAVLG----IDAVELEMSFPDQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTSEGWNPVNDIESVIVSIRSLLVVGDGRL 141
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: A0A2P6MUC2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MUC2_9EUKA)

HSP 1 Score: 144 bits (362), Expect = 2.060e-31
Identity = 79/169 (46.75%), Postives = 102/169 (60.36%), Query Frame = 3 
Query:  690 ANTRLMRDLSRLMRSDTKKLGFSLQLKND-----DALHEWNINLFGFS-DCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYI-IDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKW 1175
            A  RL+RDL  L   DTK LGFS +   D     + L+ W I LFGF     LA DMKR EK      + + M+F  DYP++PPFV +V PRF   TG++ I G+ CM+LLTN GW  TNDIES+++QIRA+++ G AR+D      T PY+E  A  AF+  A  H W
Sbjct:  552 ATMRLIRDLKSLNSGDTKSLGFSAEPTIDTRTGLENLYHWKITLFGFDPSSELANDMKRYEKTSQEAFITMEMRFSKDYPYAPPFVRVVKPRFAFRTGHVTIGGSICMDLLTNAGWASTNDIESILIQIRAELLSGNARLD---EKNTTPYTEQEAWDAFKRVATSHGW 717
[Close]
BLAST of Ec-00_001460.1 vs. uniprot
Match: A0A7S3Q9L1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9L1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.740e-31
Identity = 72/157 (45.86%), Postives = 101/157 (64.33%), Query Frame = 3 
Query:  699 RLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFS-DCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKI 1166
            RL  DL ++M +DT++ GF+++  +D+ + EW + LF F  D  L +D+  L     LDHV L M F + YPF PPFV +V PRFKR TG++++GA CMELLTN+GW P NDIESV+V IR+ +VVG  R++  A  +T+   E    AA     K+
Sbjct:  315 RLAADLYKVMMTDTQEAGFAVEQNDDECMDEWTVRLFKFDEDSDLHKDLLVLG----LDHVELKMNFPEQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTNEGWNPINDIESVIVSIRSLLVVGDGRVEA-AADMTEKKREALLAAAANGGGKL 466
The following BLAST results are available for this feature:
BLAST of Ec-00_001460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA1_ECTSI2.640e-215100.00UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZBS4_9STRA8.570e-7147.95Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S3XWH9_HETAK9.900e-5640.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6B2LKV9_9EUKA5.060e-3445.18UBC core domain-containing protein n=1 Tax=Arcella... [more]
A0A1Z5K8B1_FISSO1.860e-3253.03Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulif... [more]
B8C5U5_THAPS8.950e-3249.06UBC core domain-containing protein n=1 Tax=Thalass... [more]
K0RZ81_THAOC9.600e-3253.44UBC core domain-containing protein n=1 Tax=Thalass... [more]
A0A7S1ZF53_TRICV1.090e-3147.52Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A2P6MUC2_9EUKA2.060e-3146.75Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S3Q9L1_9STRA3.740e-3145.86Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1686797..1696303 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score638.6
Seed ortholog evalue1.7e-180
Seed eggNOG ortholog2880.D8LEA1
Preferred nameUBE2Q1
Length3519
KEGG koko:K10582,ko:K19362
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
Gene idEc-00_001460.1
GOsGO:0000003,GO:0000209,GO:0001967,GO:0002790,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0007154,GO:0007267,GO:0007275,GO:0007565,GO:0007566,GO:0007610,GO:0007617,GO:0007618,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0009306,GO:0009566,GO:0009914,GO:0009987,GO:0010817,GO:0015031,GO:0015833,GO:0016020,GO:0016567,GO:0016740,GO:0019098,GO:0019538,GO:0019787,GO:0019953,GO:0022414,GO:0023052,GO:0023061,GO:0030072,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0033036,GO:0036211,GO:0036477,GO:0040011,GO:0042886,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044706,GO:0045184,GO:0046879,GO:0046903,GO:0048609,GO:0048731,GO:0048856,GO:0051179,GO:0051234,GO:0051704,GO:0051705,GO:0061458,GO:0061631,GO:0061650,GO:0065007,GO:0065008,GO:0070459,GO:0070647,GO:0070936,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0097458,GO:0140096,GO:1901564
EggNOG free text desc.ubiquitin conjugating enzyme activity
EggNOG OGsKOG0897@1,KOG0897@2759
EC2.3.2.23
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001460Ec-00_001460Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1686797..1696303 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001460.1Ec-00_001460.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1686926..1693978 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001460.1.1Ec-00_001460.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1686797..1687063 +
Ec-00_001460.1.2Ec-00_001460.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1688659..1688832 +
Ec-00_001460.1.3Ec-00_001460.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1689705..1689842 +
Ec-00_001460.1.4Ec-00_001460.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1690605..1690714 +
Ec-00_001460.1.5Ec-00_001460.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1691297..1691444 +
Ec-00_001460.1.6Ec-00_001460.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1692114..1692287 +
Ec-00_001460.1.7Ec-00_001460.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1693204..1693308 +
Ec-00_001460.1.8Ec-00_001460.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1693901..1696303 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0014605UTR:Ec-00_001460.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1686797..1686925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001460.1CDS:Ec-00_001460.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1686926..1687063 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0014603UTR:Ec-00_001460.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1693979..1696303 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001460.1 ID=Ec-00_001460.1|Name=Ec-00_001460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=355bp
MAAMTGGASAMETGAAAPKSTAVGTEEIDFAVEAENRGMKLVSSTREENG
GVVLTLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQA
RRIQEVMSAAAEVYMCISGEGEGDDEEDGEDKYEYDYGGMEMEMDDEKAK
RSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLM
RSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHV
RLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTN
DIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWA
ISDP*
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spliced messenger RNA

>Ec-00_001460.1 ID=Ec-00_001460.1|Name=Ec-00_001460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3519bp|location=Sequence derived from alignment at chr_00:1686797..1696303+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGAGGGGGGGGGGGGGGGTAGAGGGATAGCGCAAATAGAAGAGCACTGTT
CGGCGCCGCACCCCTTTGATCACAGCAAACTTCCACCGCGCGACTTCCAC
CCCTGGACATACACCTGGCTTCACTGAGGATGGCGGCAATGACAGGCGGA
GCGTCCGCCATGGAGACCGGAGCGGCGGCTCCGAAGTCGACAGCGGTGGG
CACGGAAGAGATCGACTTTGCTGTGGAAGCGGAAAACCGAGGGATGAAGC
TTGTCTCCTCCACCCGGGAGGAGAACGGAGGTGTTGTCCTCACCTTAGAC
CTCGGCAAGGGCAAGGTTTTCACGCTGAGCGGCGTTCCTGGGAGGGGACC
GTTCTGCGTGTCGACGGTGCACCCCTTCCTGCTGGACGGGCTGTTTGTGG
AGAACCTCGAGGAGATTCAGGCTCAGGCCAGGCGCATTCAGGAGGTGATG
TCGGCGGCGGCGGAGGTGTACATGTGCATTTCCGGAGAAGGGGAGGGCGA
TGACGAGGAGGACGGAGAGGACAAGTACGAGTACGACTACGGTGGGATGG
AGATGGAGATGGACGACGAAAAGGCCAAGAGGTCATTCCCGACTCAGGAA
GGCGGCTCTGTTTTTGAGGACACGGACATCAGCCAGATGCTGTCGGGGAA
GGCGAAGAGCGGGGCGGGAGCGAAGAGCAAAGCAGCGAGCGCAAACACGC
GGTTGATGCGCGACTTGTCCCGGCTCATGCGATCGGACACGAAGAAGCTC
GGGTTTTCTCTCCAGCTAAAGAACGATGACGCGCTGCACGAGTGGAATAT
CAACCTCTTCGGTTTCAGCGATTGCCCCTTGGCAGAGGACATGAAGCGGT
TGGAGAAGGAAAAGCACCTGGACCACGTGCGCTTGATGATGAAGTTTAAG
GACGATTACCCGTTTTCGCCACCGTTCGTGCACATCGTCTACCCGCGCTT
CAAGCGGTCCACCGGGTACATCATTGACGGGGCATTCTGCATGGAGCTGC
TCACAAATCAGGGGTGGACGCCGACGAACGACATCGAGAGCGTGGTGGTG
CAGATCCGAGCCCAGATGGTGGTAGGTAAAGCAAGGATCGACTTCGACGC
TACCTCTGTCACCCAGCCGTACTCAGAAGACCGTGCGAAAGCGGCGTTCC
GAAGTGCAGCCAAGATCCACAAGTGGGCTATCTCCGATCCTTAGCTTTTG
GCCTCAGGGTTTGGCATCGAACACCGGGGCATGGTACGCTGTGGTATCGG
GCGGGTATCCCCCGGCAGCTCATGGACATGTGTCTCACGGAGTACGGGTA
GGTCTCAAGTCGGAAGGTCGCGATTATTTTATCATTTTCCCTTGGATCGG
TAATCGCCGACTTGCATGTCAATAAGAAGGAGTGCGTTTGGATGGCCTTG
CACCGGCGGGGGGTATAGCTTGCCGCAACATCAAGAATGGCGGATTGATT
GGTGTGTGTGTGCGTGACCAGCCTGTCTACTTTTTGTCGTTGTCCTTGCG
TTTGCGAGCCAGGGCATGGGCATCATCACCAATGGGATGTCGTGCTTTTA
GACGGGCAGCGTTGCAGCGAAGAACGCACCAGCAGCCCTCCCATGGCTGT
GGACGTGGACAGAGCAAGAAAAACCGACGGCATGAGTTGTAATAATGTGG
TTGGTGTTTGTGTATTTTCTCTGTTGTTGCGGGGGGCGGCGGCGGGGGCG
GGGGGGGCAGATGGCCTGAACTCGGCATCAGCTATACTTGTCGAGGGGGT
TGGAGATGGATTGGGTGGGTGTTGTCGGGGATTGGTCTGTGAGTTTGGCT
CTGTTCGACAGCACGCTTCGTGCCCGCCGTGAGCATGGCGCTGTCCAGGG
AGAGCTCACAGACAGATGGGAGAGGTACTTACACGTTTTGCAACACTTTT
CCCACGTGTGGTGTAGAGTATCGCACACAGCGGCAACCAATCCTACGATA
GATCTGATTCGTCTAAAGATACTTTCGTTGTGCTTTTGCATTAAACATGT
GTGTGCGATACATGTAAATTTGCGTCGAACGCTTTTCTGAGGCTGCTCTC
GGGTAAGGGGGTGGGGGAGGGGTGTGGAGGCTGTTGCCGGACTCGGTCTT
CTGGGGTCAACATCCCTGTTTCGTTTCTCTCTCTCTCACAACTTTTAGAG
TTGATTTTCTTCTATCTTTTGGCAGCTACGATCCGGTGGAGTCTTACGCG
GCATGACTATTATACTGTGTTGTTCAGCCCTTTGCGTCTCACGGACGATG
CTTTAGGCATTGAAAGTTTTGCGACGGTTGCTGTGGTTGTGTTGTTATTG
TTGTGGTCGTTGTTGTTGTTGTTCTAGTTGTGTTCGTTGTTGTCTCGTAC
GCTGTGTTTTAGTTGGATGGGCGCTTCGGGGGGGGTAGAGATGCGAATTA
CATGTTCGCGCAAGATCGGGTTTTCAAGATGTCACCCCCAACACGTAGGC
GAGAGTGTCATCTTTGATCGTGGGTACTGGTTCAACCCCACGGAACGTGG
TCACTGAGCCGGTGGTTCTTAACTCGCGTCTTCAGGGGGCCTGAGCCACA
AGTGCTCGAAAACCATGCCGGTTGATCTAGCATCACGGCATCTTTACCAG
GTTAGCGAAGAAGAACGCCTCGTCTCACTTTGCCGTTTCACGTCGTGCAT
TGCCTCCGACCGTTCTTCGTTCTGCGTGCTTCGTTCACTGCACCCCCGTA
CCGCTGCCTCCAATTAGCTGAGTGGGTAATCGCCAACAGTTACGGAAACA
TTCCGGCACGCCGCCCTCCCCTCTCCAGCAGGATAATCTCAAACGGGATA
CGAAACATCGATGATGAAAGCAACGCCGCATTCAAGTGGAACCGAAATGC
AAAGGCAAGCTACACTTCTACCAAGGGGACTCCTCGCTCGTTAGTCACGG
GCAAACCCAGCCATCCCTTCCGGCTCTTGGCGGCAACGATACTTTGTAGA
TCTCCCGACATCGTGATGCAAATATTACATCTTTTTTGTTTTTCGTACTG
TTGTCCCACACCACCAAACGGCGTCCGTACTAATAAGACATAGGCGTGTT
CGAGCCAGTCCTTCTCCTAGTACTGAAGTACGGGATAAACCACTTCCACA
GAGGTCGTTGAAGCCATTTCGCCGTCATAGGGAAGTGATGCGTGTTTCAT
GAGATTGGCGAAAAAAAACAACTCATTCCTGGTCGTGATCGCATGTCCGG
AGAACAACTCCGCAGTGAACTCACACATGATGAGACTTTGTTTAGCGTGG
GTTGGTCATGTCGCAAGGGCCTATTGTTTCTGTATTCAAGTATAAATTAA
GCGCCGAATTGAATAAGAGCAGTGCTCGCCTCTACAAGGTATTTTCTTTT
CCAGGCAATCTATCGACGGGGGCGATGTGAATGCATCCGTTTTTCATCTC
CGTTTATATTGTGTCTTCCAGCTCACGTACCCCTGGCGGAAAGCCCCCCT
CCCCTTCGCGGGAACAAGCAGCGTAGCGGTACGCCTGGTACGCCACTACC
AATATCACTGCCACCGGAA
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protein sequence of Ec-00_001460.1

>Ec-00_001460.1 ID=Ec-00_001460.1|Name=Ec-00_001460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=355bp
MAAMTGGASAMETGAAAPKSTAVGTEEIDFAVEAENRGMKLVSSTREENG
GVVLTLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQA
RRIQEVMSAAAEVYMCISGEGEGDDEEDGEDKYEYDYGGMEMEMDDEKAK
RSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLM
RSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHV
RLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTN
DIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWA
ISDP*
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mRNA from alignment at chr_00:1686797..1696303+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001460.1 ID=Ec-00_001460.1|Name=Ec-00_001460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9507bp|location=Sequence derived from alignment at chr_00:1686797..1696303+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGAGGGGGGGGGGGGGGGTAGAGGGATAGCGCAAATAGAAGAGCACTGTT
CGGCGCCGCACCCCTTTGATCACAGCAAACTTCCACCGCGCGACTTCCAC
CCCTGGACATACACCTGGCTTCACTGAGGATGGCGGCAATGACAGGCGGA
GCGTCCGCCATGGAGACCGGAGCGGCGGCTCCGAAGTCGACAGCGGTGGG
CACGGAAGAGATCGACTTTGCTGTGGAAGCGGAAAACCGAGGGATGAAGC
TTGTCTCCTCCACCCGGGTGAGTTGTGCCGAGTTCAAAATGTCTCTTTTG
AGCTTCGGAGGATCGTTCTCTGCATCTGTACAGGAACCAGCAGACATCCT
TTCGTACCCCTTTTCCAATAGACCACTGCTGTGTGCTTCGACGTCCCTCA
CCCGTAGCCTATGGCAACACAGCAGGTAGTAGCGCAGTCCTTGAAGCCGT
CGACCTCCCCGTGAGTGTATCCATACGCCATACACCGCTTGTTGTGTATT
GGCAGCCGTGAGAGGTGCGAGAGGCACAGCAGTACCAATATGGGTTCATT
CGGGCAGATACAATGTCGAATGATCTCAGGCTTCTCGCGGTCCGTGGTTT
CATGATGTGGGCAATATGCTAGTGTCAGGTGCTTGTGTATGGTGCAGTTG
GACTCGGATGGAATTGATCCCACTGGCCCGTCGAATTTCATCCAGGCGCG
CGGCAACACTATTCACCCGGTTATATTGGTGGTCGAGTAGACTATGTTTT
GCGGGGTCGAGAACCCTCACTCCGCGCGAAGGGGTGATCGCGCAATTGGT
CAAGCACCCTCGAGGCGGTTAACACAGTGCTCATAACTGCCTCTTGCAAG
CGAAAGCACCAGAAAAATGAAGCCATTCGCAGCTGTCATCCGTATGCAAG
GAAATAAGCAAAAGCACGTTGTTAGCCCTATGCAGCGTACCGTTCATGCG
ACTCGCCGAATACCTCACGGCGCTTCGCGCTTGGAGATGTGAGAGCCTGG
TCCGGTGAATCCCCGGCTTTGTAGCGATGCGAGGTCAATGCATTGTACGG
CATGCACGTACACCCCCCCCCCCCCTTGGGGATACCCATGACCCCCAAAA
GAGGACGACCGCTGCCGTATTGTACGCTGCAACCAGCAAATGCGAGTACC
GTAAGAGTCGGAGAGATGGCACCCCCGTGTCGTTTTGTATAAGCGTATTT
CTCCACAACCAGGGGGGTATCACTGCCGAAAAGGGTAGTTTTGGAAACAT
GTCGTCGAGGGCTTTCCTGAGAGGTATCGATTGGTTTCGCACCCTCCTAG
TTGTGGAGAAATACGCTACAAAAAAACATGAACACGGGGGCACCATCTCT
CCGACTCTTGCGGTAGCTTATCCAAAGCTAGTCCTGAGTATCGGTGATAG
AAAACGAGGGCGATCGCTTTGTTGTACTCTCTCTCTCTCTCCGTGGTACA
TCAATTGCCGGTACCATGGTAGAGGGCAACGCTGACAAAACACGATGCCC
CCCACTTGCTTTCAGGGAAAATGCACGCACGGACGTTCATCAAGCTGCTC
GCAGTTGCTTAGTACATATGTGTGCCAGGTGTGCTTAAGGGTCGCCTGGT
ACCTGGACACATTCCCATGCCTGCACACACGATACTAAATACATACCGAT
GAACGTTTTTAGAAAAAACATACAGGGTGCGAATGGCACAAGAGACGCGT
TCCGACCATGAGCCACGTCGTGTGGCATTCCATCCGCGGATTGTGTTGCT
CATATTGCTACATGGAGCGATGCGTTGTGCTACCACCCACATGCCAAAAG
AAAACCAATCGATGGTTACAATATGCTGCCCCTCTGCTGTGGCGTTTTTC
GTGTCAACGAAGGAGGAGAACGGAGGTGTTGTCCTCACCTTAGACCTCGG
CAAGGGCAAGGTTTTCACGCTGAGCGGCGTTCCTGGGAGGGGACCGTTCT
GCGTGTCGACGGTGCACCCCTTCCTGCTGGACGGGCTGTTTGTGGAGAAC
CTCGAGGAGATTCAGGCTCAGGCCAGGCGCATTCAGGTACGGGAGTTGCG
AACTCACACGCAACTTCCGCTTTTGTTACCTCGCCCAGTGTCGCTTTTCG
TGCGTTCTGTGTCGCTGCTCTGGGCTTGTACTCAGAACGACTGCTCTACC
GTCGGGAAGGGCAGGTCTGTGTCTTCTAGGAACCATGTTGTCCTTCAGAC
ACGAAAAAGAGGACACAACCAACAAAATGGGCGGCTCGGTTGAAACCCCA
CCAAGCAAGTACGACCTTTGTTTCCCAGCGATAACTCCTACACCGAACAT
GCTTCTCTGGGGTGGTGTGTTACCCTTTGATGTAGCGAACACGCCCAATG
GCGTTAGGCCGAAAATTAGCTGTTTACCCGGGGCGTATGCCGCAGACCGA
CATGTCTTGGAGGAGTAATTTGTTTCCAGATGATACTGTAATCTGACAAC
CGAAGTGGGGAGTCTATTTTTCATGGAGCCGAAAAGGCGTGGGTGCGACT
GGGGAGACTCCTACACGAGCGTGTAAAGTAGTATGTTCTGCGATTTTGCG
CTAGGGCGCCTTCCCCGTTGTCGAGACAGATGAACTAATGAAAGGGGGGA
AAAACCCCAAGGAATCCTAGGGCAGATGATATTTTCGATTTTGAAGACAT
GTGATTTCCAGTTTTATCCCGTACCGAGCACCGTTCGTAACATCTTTTCT
GCCAAAGCACGTCAATCTTGGGCGTTTAGTCGAAACGTTGCCAGGATACG
CGCAACCGTCGCCACGTCTCGATATCAATTTACAGTATCATGCCATGTGC
CTTGCGGAGAATAGACAGTGGCTGGACCAGCAAGTACTTGTCCCACAACA
GCGTTGTTAGCGTTATCCATGTCAGGCCATTTAATCGTCCGGTTGCGTTG
GTGAACAGGAGGTGATGTCGGCGGCGGCGGAGGTGTACATGTGCATTTCC
GGAGAAGGGGAGGGCGATGACGAGGAGGACGGAGAGGACAAGTACGAGTA
CGACTACGGTGGGATGGAGATGGAGATGGACGACGAAAAGGCCAAGGTAC
TCACCGGTCACATACTCTCTCTCGTTGGTAGATTGGATTCACGACTCCCG
GTTGATTGCACCTGGTGTTAACCCATCTACTTGACCATCTTTCCAGGGCG
GTTTGTGCTTCTTAAGGGTGGCTTTTGTGATAGTCTTGGTTGTTGATCAT
ATTCAAACGCGAGGGAGGCATGTCTGCCAATTCCTACTTTCGCGGGTATT
ATCTTGTTTTCGCCGCTTGGTCTTGAAGTCACAGCAAGCGAGCTCCGTGG
TGTTGTCTGGCCACTTGCCCGATGCCGTGGTTGTTCCGTCTTTCCTTCTC
CTTGCCTCCTTTTCCTGTTTCTTGATACGTAACAGTTTTTTCTCGAGTCT
TGTGGAACCCGCACAACGAATGCCTGTGTAAATGCTGTTTGTCACTGTTT
GGCTCTGCTGCTGTTCGTTTCTGTGCCGATGTTGAAGGAGTTTTGTGGCC
GAACCAGGAGCCCAACCCACGCTGCCGTAGTATGTACCAGTATTGCATAA
AAGTAGGATTGCACTGCGTGGCGCATGTGATATCGCAAACGTTCTTTCGT
CGACGTTGCGGACTCGAAACCGAGCCAATGTTGCATCAGGAGGAACGGGA
ATGCCGCTTTCCGACGATTCGCAAATGACCCTAAAACTGACATTCCCGAG
CGCTTCCTTCCACCCTGCTGGGTACCTGCCCGTTGCGACCGCCATGCGCC
CTGTCTTCTTCATCAATGTGTTGGAAAACAACACACGGTGTTGTGGGGCC
AACAACAGAGGTCATTCCCGACTCAGGAAGGCGGCTCTGTTTTTGAGGAC
ACGGACATCAGCCAGATGCTGTCGGGGAAGGCGAAGAGCGGGGCGGGAGC
GAAGAGCAAAGCAGCGAGGTGACTTGACCAGCCTCAAGCGTTAGCCTCGT
GTGACGGGACTGGCCGTCGTCGCTATTCCACATGGGCCGATGGATACACT
ATATTTGGCGGTGCTCTGTGAGGGGGGAGAGAAGGATGGAGAGTTGAATT
GTGGAGTCATTGCGTTTTTTATGGATCCGAGTCTGGCACCCATCTACTTG
CCGTGAGGTATTCAGCTGGCAAAGCGTGGCATCGAATCCAGGAGCTCTCG
CAATGACGCTTTGCGTGTTAGGTTCACCCTTGCGATTTTTGTGCCAGCCC
ACGTCCACGACCACAGTTTCTTCCCCACTTTCATATTTATCTCGCCTCTC
CCTCGCATCGGTACTCGTGCGAATACCACGTTTTCCCGTCGTCTTCGAAG
TATAGTGTTTTTTTCGCGATTTTTTTACCACCTTATGTCCATGAACACAG
CTTCTCCCCTCTCCCCCTCATATATCTCTCTCTCTGTCTCTCTCTCTGTC
TCTCTCTTTCTTTGTCTCTCTCTCTCACCTCTCTCTCTCTCTTCTCTCTC
TCTCACTACTCCCTCGTCGCATTCCGGTGGGAAAACTGTTTTTCGTTCAG
CGCAAACACGCGGTTGATGCGCGACTTGTCCCGGCTCATGCGATCGGACA
CGAAGAAGCTCGGGTTTTCTCTCCAGCTAAAGAACGATGACGCGCTGCAC
GAGTGGAATATCAACCTCTTCGGTTTCAGCGATTGCCCCTTGGCAGAGGT
ATGCCTCTCAATATAGGTAACAATACTGCAAGATAACTAGGAGCCCCCGC
ATCATGGATGAGGAGGGGCCACGCCGATGATACTCTCGATACCCCCAGAT
TGAGTTTCTGATTTTTTCAAGTAGTTGTTGTGTGTTGCGGTCGTCGGGTC
CAGCGAACTGCCCTTTGGGCAGAGACGTTTCTTCGCATGAAGTGCACCAT
AAGGTGTTTTGTTTGTTGATGCCCGTCCCCGCCCTCGTCCCCTGACCTCC
GATCCCGTGTTCCTCGATGCCCCCTGGTGGGTTTCAATTTCGTGAGCGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGTTGTTTTTGTTGTTGTTGT
GTTGTTTTTGTTGTTTTTGTTGTTGTGTTGTTGCTGCTGTCTTGGTTGTT
GATTCGATCCAACTCTCCCGGCTTGAGCTTTGACTATGCGGAGAGATGCC
TTCATCTACTGATGCAGGAAAACCGGGAATTGGAGGGCGGCCGTCGAGGA
ATCGCTGTAGACTGGATAGAGGTTGCGTATTGCTCGCACTACCCTCACGC
AACGACCAGCACGAACTTCCGTGGTGCACTAGTCGGCGGGAATACGTACG
TCCTCACAGAAACCTTTGTCCCGAACAACCACTTTGTTCCGGCAAACCGC
GGCTTTGCCCATCCCAGGACATGAAGCGGTTGGAGAAGGAAAAGCACCTG
GACCACGTGCGCTTGATGATGAAGTTTAAGGACGATTACCCGTTTTCGCC
ACCGTTCGTGCACATCGTCTACCCGCGCTTCAAGCGGTCCACCGGGTACA
TCATTGACGGGGCATTCTGCATGGAGCTGCTCACAAATCAGGTTCGTCGC
AGTTGGTTAATTCCGTCCCTGCATTTGGTTCATTTGTTCCAGTCTCTTGA
TTTCATTCATTTGGTACATTCCTTCGTTTCTCCATCCAAGGGTGTGTTGT
GTAGGGTCTGCAACTTTCTATAGGGAATCGCAAGTGTTCAAAGAACGCAC
AGAAGTATCGGGTAGGTATTGGAAGGGTCACAGCACCAAACAGAAAAAAA
CGGGTGTTTGAGAAGGCTGTACAGAACTCAAAGAACGGTAACGGTTTTTT
ATCCTTTGTATCGTTTTTTCTCCAGTTATTTTTCGCCTGTTTCCCGGTAT
GTAGCCTCATTTCGTTGCACAGAACTCTTGGAGGTATTCTGTAGAGTATT
GAAAGTGCCACAGAACTTACAGAAGTTTTCTGTAGGGGTTCTGTAACGTT
CTGTAGGGTAGGCTCCCGGCAGCAAACCTCCCCTACACTCCGGTCACTCA
TTCGTTCATTCATTCATTCATTCATTCTTTTCTTTAGTTCCAGTCCTTTA
TTCCATTCCTTCATCCCATTCCTTCATGCCGACGGTCTCGATGCCGATTG
AGAACGCTGCACTGTTCGGTGTTGGTGGGTGACAGTATTGATGTGTGTTG
GTGTTGGTGATTTCATTCTTGGTATTGGTGTTGCCGTCACGTGCTACTAC
TTTGATGACCGCTTTCTCGTAATACACTAATTTTTTCAAACCCGGCGGTC
CTTTGAATCGAGAAACGCCAACGTATGGCACGATACGTGCGAAGCTTTCA
CGTGTGGTGTTGCCCGCCTTGCCAAACACTGTTGGTGCGTGTTCGCTCAA
CCTGTGATGTGCTTTGTCCTCCCGCCTCCTCAGAATTGTCATCGTCGTTG
TTGTTGGTGGTGGTGTTTGCTATCGTTTTCTTTGTCGTGTCTTTGTTGTT
TGTGCAGGGGTGGACGCCGACGAACGACATCGAGAGCGTGGTGGTGCAGA
TCCGAGCCCAGATGGTGGTAGGTAAAGCAAGGATCGACTTCGACGCTACC
TCTGTCACCCAGGTATGCACGGGACTGTCAGTCCGTAACCCGCCGTGCAG
CGTGGCGCCACGATAGATCTGCGTACTGATGTAGCATCACTTGATGTGTC
GCACCGTTGTTTGTGCCTTCTTTTTGCATGCTATTATAGACGCTTGCAGT
ATTATCGCATCGTGTCTGGAGTGCCGCGGAGGTTCTATGCTACGAAGCAG
CTGCCATTGGCAGGGAAGCCATGTTAGATTGGCTGACCAAAACGCCACTG
CCGTCGTGACTCCGTTTGTATCAGAGTGAAACACTTCTTTTGCGCTCCCT
CCACCGCAAAGGCGGTCCGAGTTCTCCCCAAGCCCCCGCGCATCCTGCCC
CGCTGTCAAGCACGGTATTCCAGCCCTGAATTTTGGACAGTCGTGTGGCC
CATGGCTAAGTGTCTGCCCTGAGCAATGCATGAGATATACGGTACCGAAG
ACCGAAAGACCACGCTACGTTACCGAATGCTCTCAGCAACCTCTCGGCCC
CAGCGATTTGTCTGCCTAACCGTATTTCGAATTTTTGAACAACGGCGGTG
CTCCAACTACGTGTCACCCCCCTCTCCCCCTCTCGGCATGTTTCTTGTGA
TCAGCCGTACTCAGAAGACCGTGCGAAAGCGGCGTTCCGAAGTGCAGCCA
AGATCCACAAGTGGGCTATCTCCGATCCTTAGCTTTTGGCCTCAGGGTTT
GGCATCGAACACCGGGGCATGGTACGCTGTGGTATCGGGCGGGTATCCCC
CGGCAGCTCATGGACATGTGTCTCACGGAGTACGGGTAGGTCTCAAGTCG
GAAGGTCGCGATTATTTTATCATTTTCCCTTGGATCGGTAATCGCCGACT
TGCATGTCAATAAGAAGGAGTGCGTTTGGATGGCCTTGCACCGGCGGGGG
GTATAGCTTGCCGCAACATCAAGAATGGCGGATTGATTGGTGTGTGTGTG
CGTGACCAGCCTGTCTACTTTTTGTCGTTGTCCTTGCGTTTGCGAGCCAG
GGCATGGGCATCATCACCAATGGGATGTCGTGCTTTTAGACGGGCAGCGT
TGCAGCGAAGAACGCACCAGCAGCCCTCCCATGGCTGTGGACGTGGACAG
AGCAAGAAAAACCGACGGCATGAGTTGTAATAATGTGGTTGGTGTTTGTG
TATTTTCTCTGTTGTTGCGGGGGGCGGCGGCGGGGGCGGGGGGGGCAGAT
GGCCTGAACTCGGCATCAGCTATACTTGTCGAGGGGGTTGGAGATGGATT
GGGTGGGTGTTGTCGGGGATTGGTCTGTGAGTTTGGCTCTGTTCGACAGC
ACGCTTCGTGCCCGCCGTGAGCATGGCGCTGTCCAGGGAGAGCTCACAGA
CAGATGGGAGAGGTACTTACACGTTTTGCAACACTTTTCCCACGTGTGGT
GTAGAGTATCGCACACAGCGGCAACCAATCCTACGATAGATCTGATTCGT
CTAAAGATACTTTCGTTGTGCTTTTGCATTAAACATGTGTGTGCGATACA
TGTAAATTTGCGTCGAACGCTTTTCTGAGGCTGCTCTCGGGTAAGGGGGT
GGGGGAGGGGTGTGGAGGCTGTTGCCGGACTCGGTCTTCTGGGGTCAACA
TCCCTGTTTCGTTTCTCTCTCTCTCACAACTTTTAGAGTTGATTTTCTTC
TATCTTTTGGCAGCTACGATCCGGTGGAGTCTTACGCGGCATGACTATTA
TACTGTGTTGTTCAGCCCTTTGCGTCTCACGGACGATGCTTTAGGCATTG
AAAGTTTTGCGACGGTTGCTGTGGTTGTGTTGTTATTGTTGTGGTCGTTG
TTGTTGTTGTTCTAGTTGTGTTCGTTGTTGTCTCGTACGCTGTGTTTTAG
TTGGATGGGCGCTTCGGGGGGGGTAGAGATGCGAATTACATGTTCGCGCA
AGATCGGGTTTTCAAGATGTCACCCCCAACACGTAGGCGAGAGTGTCATC
TTTGATCGTGGGTACTGGTTCAACCCCACGGAACGTGGTCACTGAGCCGG
TGGTTCTTAACTCGCGTCTTCAGGGGGCCTGAGCCACAAGTGCTCGAAAA
CCATGCCGGTTGATCTAGCATCACGGCATCTTTACCAGGTTAGCGAAGAA
GAACGCCTCGTCTCACTTTGCCGTTTCACGTCGTGCATTGCCTCCGACCG
TTCTTCGTTCTGCGTGCTTCGTTCACTGCACCCCCGTACCGCTGCCTCCA
ATTAGCTGAGTGGGTAATCGCCAACAGTTACGGAAACATTCCGGCACGCC
GCCCTCCCCTCTCCAGCAGGATAATCTCAAACGGGATACGAAACATCGAT
GATGAAAGCAACGCCGCATTCAAGTGGAACCGAAATGCAAAGGCAAGCTA
CACTTCTACCAAGGGGACTCCTCGCTCGTTAGTCACGGGCAAACCCAGCC
ATCCCTTCCGGCTCTTGGCGGCAACGATACTTTGTAGATCTCCCGACATC
GTGATGCAAATATTACATCTTTTTTGTTTTTCGTACTGTTGTCCCACACC
ACCAAACGGCGTCCGTACTAATAAGACATAGGCGTGTTCGAGCCAGTCCT
TCTCCTAGTACTGAAGTACGGGATAAACCACTTCCACAGAGGTCGTTGAA
GCCATTTCGCCGTCATAGGGAAGTGATGCGTGTTTCATGAGATTGGCGAA
AAAAAACAACTCATTCCTGGTCGTGATCGCATGTCCGGAGAACAACTCCG
CAGTGAACTCACACATGATGAGACTTTGTTTAGCGTGGGTTGGTCATGTC
GCAAGGGCCTATTGTTTCTGTATTCAAGTATAAATTAAGCGCCGAATTGA
ATAAGAGCAGTGCTCGCCTCTACAAGGTATTTTCTTTTCCAGGCAATCTA
TCGACGGGGGCGATGTGAATGCATCCGTTTTTCATCTCCGTTTATATTGT
GTCTTCCAGCTCACGTACCCCTGGCGGAAAGCCCCCCTCCCCTTCGCGGG
AACAAGCAGCGTAGCGGTACGCCTGGTACGCCACTACCAATATCACTGCC
ACCGGAA
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Coding sequence (CDS) from alignment at chr_00:1686797..1696303+

>Ec-00_001460.1 ID=Ec-00_001460.1|Name=Ec-00_001460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1065bp|location=Sequence derived from alignment at chr_00:1686797..1696303+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGCAATGACAGGCGGAGCGTCCGCCATGGAGACCGGAGCGGCGGC
TCCGAAGTCGACAGCGGTGGGCACGGAAGAGATCGACTTTGCTGTGGAAG
CGGAAAACCGAGGGATGAAGCTTGTCTCCTCCACCCGGGAGGAGAACGGA
GGTGTTGTCCTCACCTTAGACCTCGGCAAGGGCAAGGTTTTCACGCTGAG
CGGCGTTCCTGGGAGGGGACCGTTCTGCGTGTCGACGGTGCACCCCTTCC
TGCTGGACGGGCTGTTTGTGGAGAACCTCGAGGAGATTCAGGCTCAGGCC
AGGCGCATTCAGGAGGTGATGTCGGCGGCGGCGGAGGTGTACATGTGCAT
TTCCGGAGAAGGGGAGGGCGATGACGAGGAGGACGGAGAGGACAAGTACG
AGTACGACTACGGTGGGATGGAGATGGAGATGGACGACGAAAAGGCCAAG
AGGTCATTCCCGACTCAGGAAGGCGGCTCTGTTTTTGAGGACACGGACAT
CAGCCAGATGCTGTCGGGGAAGGCGAAGAGCGGGGCGGGAGCGAAGAGCA
AAGCAGCGAGCGCAAACACGCGGTTGATGCGCGACTTGTCCCGGCTCATG
CGATCGGACACGAAGAAGCTCGGGTTTTCTCTCCAGCTAAAGAACGATGA
CGCGCTGCACGAGTGGAATATCAACCTCTTCGGTTTCAGCGATTGCCCCT
TGGCAGAGGACATGAAGCGGTTGGAGAAGGAAAAGCACCTGGACCACGTG
CGCTTGATGATGAAGTTTAAGGACGATTACCCGTTTTCGCCACCGTTCGT
GCACATCGTCTACCCGCGCTTCAAGCGGTCCACCGGGTACATCATTGACG
GGGCATTCTGCATGGAGCTGCTCACAAATCAGGGGTGGACGCCGACGAAC
GACATCGAGAGCGTGGTGGTGCAGATCCGAGCCCAGATGGTGGTAGGTAA
AGCAAGGATCGACTTCGACGCTACCTCTGTCACCCAGCCGTACTCAGAAG
ACCGTGCGAAAGCGGCGTTCCGAAGTGCAGCCAAGATCCACAAGTGGGCT
ATCTCCGATCCTTAG
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Synonyms
The feature 'Ec-00_001460.1' has the following synonyms
Synonym
Esi0013_0104
Esi_0013_0104