Ec-00_001450.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_001450.1 vs. uniprot
Match: D8LEA0_ECTSI (Thioredoxin-like_fold domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA0_ECTSI) HSP 1 Score: 521 bits (1343), Expect = 2.670e-186 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 2 Query: 128 MRGNYGRSPPAHRNMAAASRRLSFRTLLGVALLFGLTLTILAAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTSSAVPWFKGWAAQNAE 913 MRGNYGRSPPAHRNMAAASRRLSFRTLLGVALLFGLTLTILAAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTSSAVPWFKGWAAQNAE Sbjct: 1 MRGNYGRSPPAHRNMAAASRRLSFRTLLGVALLFGLTLTILAAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTSSAVPWFKGWAAQNAE 262
BLAST of Ec-00_001450.1 vs. uniprot
Match: A0A815YPJ9_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A815YPJ9_9BILA) HSP 1 Score: 126 bits (317), Expect = 4.000e-31 Identity = 69/201 (34.33%), Postives = 113/201 (56.22%), Query Frame = 2 Query: 263 VQSEPAIPF--DGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLS 859 + ++ IP DGYG G +A + +E++LD C DC +WP + +V +AYG + F + FPLPYH N+F A++ I + + D S+ ++ T+VF Q+ ND+T+ MT PQ+ D L ++ ++ F GMA+ ++ +TR +KY C GV GTP I G+ A+ D + DW+ ++DP+L+ Sbjct: 14 ISAQAPIPTRPDGYGV----GGPADAHVVIEMFLDPLCPDCKASWPTVLQVIQAYGTKIHFRFHTFPLPYHTNSFVASQGVHVISNVTNRNLD-SIFTYVTKVFENQETWYNDATKNMTMPQVVDSLAAFVAQLGLVTKAQFLAGMANDDINFETRVSWKYACSRGVVGTPTFLINGV-ATSADDSWSLADWKSVIDPILA 208
BLAST of Ec-00_001450.1 vs. uniprot
Match: A0A820AKD2_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820AKD2_9BILA) HSP 1 Score: 125 bits (315), Expect = 2.840e-30 Identity = 72/208 (34.62%), Postives = 112/208 (53.85%), Query Frame = 2 Query: 251 AAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTSSA 874 A V + S P DGYG G +A + VE++LD C DC +WP + +V + YG + F + FPLPYH N+F A++ I + + DA + + T+VF Q++ ND+T+ MT PQ+ D L ++ ++ D F GMA+ ++ +TR +KY C V GTP I G+ S D + DW+ ++DP+L+ A Sbjct: 20 AQVPIPSHP----DGYGV----GGPADAHVVVEMFLDPLCPDCKASWPTVLQVIQYYGTKIHFRFHTFPLPYHTNSFVASQGVHVIANATSRNLDA-IFLYVTKVFENQEKWYNDATKTMTMPQVVDSLATFVAQLGLVTKDKFLAGMANDDINDETRISWKYACSRNVVGTPTFLINGVAVSA-DASWSVDDWKSVIDPILASNGVA 217
BLAST of Ec-00_001450.1 vs. uniprot
Match: A0A2R6WDY7_MARPO (Thioredoxin-like_fold domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WDY7_MARPO) HSP 1 Score: 105 bits (262), Expect = 1.930e-23 Identity = 70/213 (32.86%), Postives = 104/213 (48.83%), Query Frame = 2 Query: 245 ILAAVAVQSEPAIP----FDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTE-VFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTS 868 +L +++V AIP +DG+G + ++ + +E ++D C DC +AWP + +V YG F+ FP+P+H+NAF AA+A L+ S ++S E +F QD ND+T T + A G+ AD F G D+ + TR FKYGC V TP + GI S D + +DW +LDPL S S Sbjct: 16 VLCSISVSLVAAIPIPAHYDGFG---IPPRSIPEPVLLEAFIDPICIDCKIAWPTVTKVLSIYGSSLSFIVHPFPVPFHHNAFFAARA-----LHIASSLNSSSTFPLLELIFKKQDSFLNDATNDETPASVVSRFVDLAAE-VGLPADEFAAGFTDSNTDQATRISFKYGCARYVTSTPSFLLNGIYVSA-DETWSVEDWAKLLDPLTSSLS 218
BLAST of Ec-00_001450.1 vs. uniprot
Match: A0A194ANN1_PINFU (Thioredoxin-like_fold domain-containing protein n=1 Tax=Pinctada fucata TaxID=50426 RepID=A0A194ANN1_PINFU) HSP 1 Score: 105 bits (262), Expect = 3.350e-23 Identity = 67/217 (30.88%), Postives = 108/217 (49.77%), Query Frame = 2 Query: 233 LTLTILAAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYG-DRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTSSAVP 880 L L+ A V + +P + F YG+ G A +++E ++ C D + + VA YG R Y LFPLPYH NAF AAKA + + ++ +E F ++ D SND+T M++ ++ L + + + +S F M+ +E TR ++KY C G GTP + +L + D T +W+ +LDPLL TS+++P Sbjct: 10 LVLSAFAQVPIPKQP-LGFT-YGN-----GDASAQIQLEAFMGPLCPDSKECFATLQNVASFYGPSRLRLRYHLFPLPYHRNAFIAAKATRIVDRFTNSNE---TIDFMGTIYTNIDSFSNDATHGMSEAEVIQKLADYGSKMAKVSMKEFVDMMSSDTIEGDTRTEWKYTCSRGFSGTPTFTVNDVLVAA-DPKWTVSEWRQVLDPLLGITSNSIP 215
BLAST of Ec-00_001450.1 vs. uniprot
Match: A0A5A7Q744_STRAF (Thioredoxin superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7Q744_STRAF) HSP 1 Score: 99.8 bits (247), Expect = 1.880e-21 Identity = 59/190 (31.05%), Postives = 97/190 (51.05%), Query Frame = 2 Query: 296 YGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQ-LYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSR 862 YG L+ G + +E + D C D +WP + V + YGDR + + RLFPLPYH NAF A++A + + S S + +FF Q+ S +ST +++ + D + +++ + G S G + E + TR FK G + GV GTPQ ++ G + + + W+ +LDPL+S+ Sbjct: 30 YGDKSLKAGQI----LIEAFFDPVCPDSRNSWPPLKEVLKYYGDRVKLITRLFPLPYHANAFVASRAITIVNDVVSTSSAYLLLEAFFN----NQETFSGNSTFNLSRAVVTDRIVKFSSKAVGHSQSAIQSGFQNDETDYLTRVGFKQGGIRGVYGTPQFFVNGFIFAEPGSAQNYSTWRAVLDPLVSK 211
BLAST of Ec-00_001450.1 vs. uniprot
Match: B3S4F9_TRIAD (Thioredoxin-like_fold domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S4F9_TRIAD) HSP 1 Score: 98.6 bits (244), Expect = 5.820e-21 Identity = 64/210 (30.48%), Postives = 104/210 (49.52%), Query Frame = 2 Query: 233 LTLTILAAVAVQSEPAIPF-DGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYG-DRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLL 856 L L L V P +P DGY + G+ EA + +E ++DLAC DC AWP++ ++A++YG ++ + + PL YH A+ AA + + + D + ++ VF Q E N T M+ Q+ A ++G+SA F + ++ ++ TR K GV GTP +I GI G + T + W+ ++DPLL Sbjct: 5 LVLFALIPVIYSQAPILPRPDGY---VYHNGSPEAPIHMEAFIDLACPDCKTAWPILKKLADSYGPNKLRMTFHINPLVYHRQAYYAAMGVRALVAANVSVHD--LFNYMDAVFKNQSEFYNKPTLKMSGLQVIQAYAKLAHKAAGISAMKFANALQNSGIDHTTRLSSKLAWERGVTGTPSFFINGIRVIG-QSNWTVKQWKKVIDPLL 208
BLAST of Ec-00_001450.1 vs. uniprot
Match: A0A176WPY7_MARPO (Thioredoxin-like_fold domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WPY7_MARPO) HSP 1 Score: 101 bits (251), Expect = 3.750e-20 Identity = 65/195 (33.33%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 287 FDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTE-VFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTS 868 +DG+G + ++ + +E ++D C DC +AWP + +V YG F+ FP+P+H+NAF AA+A L+ S ++S E +F QD ND+T T + A G+ AD F G D+ + TR FKYGC V TP + GI S D + +DW +LDPL S S Sbjct: 621 YDGFG---IPPRSIPEPVLLEAFIDPICIDCKIAWPTVTKVLSIYGSSLSFIVHPFPVPFHHNAFFAARA-----LHIASSLNSSSTFPLLELIFKKQDSFLNDATNDETPASVVSRFVDLAAE-VGLPADEFAAGFTDSNTDQATRISFKYGCARYVTSTPSFLLNGIYVSA-DETWSVEDWAKLLDPLTSSLS 805
BLAST of Ec-00_001450.1 vs. uniprot
Match: UPI00145888FB (uncharacterized protein LOC117332932 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145888FB) HSP 1 Score: 96.3 bits (238), Expect = 9.120e-20 Identity = 68/218 (31.19%), Postives = 109/218 (50.00%), Query Frame = 2 Query: 212 GVALLFGLTLTILAAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYG-DRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSR 862 G+ ++F L + + + S+P G+ + + G A +++ +L C D A+P + +VA+ YG DR + LFPLPYH NAF AAK A+ + S G+ S S+ T V+ SND T T+ Q++D+ S A + + + F+ D+ +E TR +KY GV TP I +L + T +DW+ ++D LL R Sbjct: 5 GLFVVFALIGAVYGQIPIPSKPL----GFSYGL---GNKSAPIQLSTFLGPLCPDSQNAFPTLLKVADYYGPDRVRLITHLFPLPYHRNAFLAAKGAQITNVLSSGN---STYSWMTAVYSNLAAFSNDVTHDKTEKQVQDMFASMAKTLN-LDQTKFNTMYKDSGIEEATRLDWKYTATRGVAWTPAFMINDVLIQA-EPTWTLEDWKKVIDSLLGR 210
BLAST of Ec-00_001450.1 vs. uniprot
Match: A0A7S3H9Z6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9Z6_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.420e-19 Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 443 YRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAE-----VEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLLS 859 YR+FPLPYH AF +KAA+ +Q G+ +A V +FF + QD I N +T T + ++E WA +G++ +N+ +GM + +E++TR +K C+ GV TP I G+ GLD TF+DWQ LDPL++ Sbjct: 2 YRVFPLPYHQQAFIVSKAAQLVQ--QLGNPEA-VFTFFDTAYANQDLIYNANTLDKTYNDVVKLVEPWAVQGTGVTEENYFIGMNSSTSVGNPIEMETRYMWKQVCIEGVFATPLFQIDGLKVGGLD---TFEDWQATLDPLVA 139 The following BLAST results are available for this feature:
BLAST of Ec-00_001450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_001450.1 ID=Ec-00_001450.1|Name=Ec-00_001450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=263bpback to top spliced messenger RNA >Ec-00_001450.1 ID=Ec-00_001450.1|Name=Ec-00_001450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=917bp|location=Sequence derived from alignment at chr_00:1683932..1686569- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. CACACGGCCTGCTCCAACTGTAGCCTACGTGCGGTGGTGAGCGCAATCTTback to top protein sequence of Ec-00_001450.1 >Ec-00_001450.1 ID=Ec-00_001450.1|Name=Ec-00_001450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=263bp MRGNYGRSPPAHRNMAAASRRLSFRTLLGVALLFGLTLTILAAVAVQSEPback to top mRNA from alignment at chr_00:1683932..1686569- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_001450.1 ID=Ec-00_001450.1|Name=Ec-00_001450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2638bp|location=Sequence derived from alignment at chr_00:1683932..1686569- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:1683932..1686569- >Ec-00_001450.1 ID=Ec-00_001450.1|Name=Ec-00_001450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=789bp|location=Sequence derived from alignment at chr_00:1683932..1686569- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_001450.1' has the following synonyms
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