Ec-00_001430.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_001430.1
Unique Name	Ec-00_001430.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	924

Homology

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BLAST of Ec-00_001430.1 vs. uniprot
Match: D8LE98_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE98_ECTSI)

HSP 1 Score: 1561 bits (4042), Expect = 0.000e+0
Identity = 923/923 (100.00%), Postives = 923/923 (100.00%), Query Frame = 1

Query:  319 MTSRSSTALAVLGLLAGFVNVDAFSLIPAAPGAVSSSVTRAKTAVASLEPPARNTWRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILGDVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSGLDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSFPAAGRGPPVGGASSDGQQAWGAPGQQQQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFGGGRXXXXXXXXXXXXXXXXXYRGNRSSYGXXXXXSYXXXXXXXXXXDRNXXXXXXXXXXXXXXSGGGSYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYGXXXXXXXXXXXXXXXXXGNSDW 3087
            MTSRSSTALAVLGLLAGFVNVDAFSLIPAAPGAVSSSVTRAKTAVASLEPPARNTWRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILGDVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSGLDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSFPAAGRGPPVGGASSDGQQAWGAPGQQQQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFGGGRXXXXXXXXXXXXXXXXXYRGNRSSYGXXXXXSYXXXXXXXXXXDRNXXXXXXXXXXXXXXSGGGSYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYGXXXXXXXXXXXXXXXXXGNSDW
Sbjct:    1 MTSRSSTALAVLGLLAGFVNVDAFSLIPAAPGAVSSSVTRAKTAVASLEPPARNTWRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILGDVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSGLDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSFPAAGRGPPVGGASSDGQQAWGAPGQQQQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFGGGRXXXXXXXXXXXXXXXXXYRGNRSSYGXXXXXSYXXXXXXXXXXDRNXXXXXXXXXXXXXXSGGGSYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYGXXXXXXXXXXXXXXXXXGNSDW 923

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BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A836CKS6_9STRA (RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS6_9STRA)

HSP 1 Score: 625 bits (1611), Expect = 3.780e-209
Identity = 331/550 (60.18%), Postives = 410/550 (74.55%), Query Frame = 1

Query: 1102 DVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESE----DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGF-EPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQ-EAPGGRFGGGR 2733
            +V   T+  L  +GI  FTPVQA+TY+HIL+GRD+I KSRTGTGKTIAFGLPVIQHL RFA+D   R+ +R  +P             +V  EL  L    G+  + F+GGA+YGPQ  +L  G+D++V TPGR++DH+Q+G LDLS+++HAVLDEADEMLNMGFAD IE +F+ V++ ECQVLLFSATVP WVR I+  Y  NPL VDAVG   N+LATTVKHL+IE  SR+R+ MLED+I  YGKGS AIVFT +K ECDELA G  FKTL+SQVLHGDI Q+QR+ TI  FR   FQVLVATDVAARGID+S+IDLVVQYRPP DPD+YVHRSGRTGRAGR G  VTL+A+NE RD++KIE+ +G+GF+FER AVPSA QVM +AG VA + +  VS D+V FF  +A+ELLAE +++    D E LLA+CLAAIARKT + +RS+LTGEPD  TVQMVA + +T+GDV FAV KL RA G   P +G+IAI KD  TAVFDM+  AA  L+  + +Q L++I+F +C  LP L  +  GGR   GR
Sbjct:   57 EVIQSTIDVLLGKGITHFTPVQAVTYEHILAGRDMIAKSRTGTGKTIAFGLPVIQHLARFADDADSRSSKRYAAPLMRTYHLATNTYSKVADELAQLAQPHGMSVECFYGGASYGPQESALRRGVDVVVGTPGRLIDHVQKGNLDLSELKHAVLDEADEMLNMGFADAIEELFARVNIPECQVLLFSATVPDWVRRISAAYLKNPLQVDAVGTTDNRLATTVKHLAIETPSRNRAHMLEDVIAVYGKGSRAIVFTQTKRECDELAAGNAFKTLSSQVLHGDIGQNQREVTIGQFRKGQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRLGTCVTLFADNERRDVQKIEKAIGKGFKFERAAVPSATQVMEVAGKVALKALDTVSADVVPFFTPAARELLAESQADGAELDTEQLLARCLAAIARKTEIQQRSILTGEPDMATVQMVAHQPMTTGDVTFAVNKLARAGGGPSPNIGKIAIGKDAHTAVFDMTQAAAAALIDVANDQELKAIKFTLCTELPELSTQEYGGRPSRGR 606

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BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A835ZP19_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP19_9STRA)

HSP 1 Score: 530 bits (1365), Expect = 1.700e-170
Identity = 285/486 (58.64%), Postives = 344/486 (70.78%), Query Frame = 1

Query: 1087 PVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESE----DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGR 2532
            PV+ KDVD KTV  L+++GIE FTPVQ++TY+HIL GRDI+ +SRTGTGKTIAFGLPVIQHLGRFA+D   RT  RGR PRFLVVCPTRELA+QV  EL  L     L+ + F+GG++YGPQ  +L  GLDI+V TPGR++DH+ +G LDLS+++HAVLDEADEMLNMGFADDIE IFS VD+  CQVLLFSATVP WV+ I+  Y  NPL+  A+ K                                         T+++  C          T   QVLHGDI Q+QR+ TI  FR   FQVLVATDVAARGID+S+IDLVVQYRPP DPD+YVHRSGRTGRAGR GV VTLYA+NE RD++KIE+ VG+GF+FER  VPS  QVM +AGTVA + +  VS+++V FF  +A+EL+AE  +     D E LLA+CLAAIARKT + +RSMLTGEPD  TVQ+ A R LT+GDVMFAV KL R
Sbjct:  148 PVDSKDVDDKTVEILRSKGIEFFTPVQSVTYEHILGGRDIVARSRTGTGKTIAFGLPVIQHLGRFADDADTRTNTRGRRPRFLVVCPTRELAKQVADELSQLARPHNLQVECFYGGSSYGPQESALRRGLDIVVGTPGRLIDHINKGNLDLSELKHAVLDEADEMLNMGFADDIEEIFSKVDIPACQVLLFSATVPDWVKRISAAYLKNPLSFIALLK-----------------------------------------THNRPSC----------TYAVQVLHGDIGQNQREVTIGQFRKSQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRSGVCVTLYADNERRDMQKIERAVGKGFKFERAPVPSPAQVMEVAGTVALKSLTAVSEEVVPFFSSAAKELIAESTASEGGLDTEKLLARCLAAIARKTELQQRSMLTGEPDMATVQLTAHRPLTAGDVMFAVDKLAR 582

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BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A7S2V2B9_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B9_9STRA)

HSP 1 Score: 496 bits (1276), Expect = 2.450e-157
Identity = 273/569 (47.98%), Postives = 375/569 (65.91%), Query Frame = 1

Query: 1018 TASKELKGDQ-MVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKEL------LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQ-LTSGDVMFAVGKLG-RAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVL 2697
            +A+KE++ +Q M+++  V E          VD +    L A+GI  FT +Q  +   IL G+DIIG+SRTGTGKT+AF LP++Q L    ++    T QRGR PR L++CPTRELA+QV  E+  + + F L+   F+GG+AYGPQ  +L  GLDI+V TPGR+MD + RG L L +++HAVLDEADEMLNMGFA+D+ETIF   D    QVL+FSAT P WV+ I+++YT  P+++DAVG    +LATTV H+SIEV    ++ +LED+I  +GKGS AIVF  +KAECD L     FK++++Q LHGD+SQ  RD  IK F+   FQVLVATDVAARG+D+S +DLVVQ  PP D D++VHRSGRTGRAG+ G AV LY+  E   I+++E+ +G  FRFE+ + P+ +QVM  A  VA   +  V+  +V +F + AQ++  E   E +E+      LL+KCLAAI+ K  +  RS+LTG+PD +TV M   RQ L + D  F V KL  R + F  ++G+I  ++D  + VFDM  EAAD LV+ +        +F +C  LP L
Sbjct:  180 SATKEVRNEQGMLAIEGVAE----------VDDRIKKTLAAKGITHFTLIQEQSLKPILEGKDIIGRSRTGTGKTVAFTLPLLQKL----DEDPSATRQRGRDPRVLILCPTRELAKQVEAEINDMSTPFRLQTHCFYGGSAYGPQANALRGGLDIVVGTPGRVMDLINRGDLRLQNIQHAVLDEADEMLNMGFAEDVETIFGNFDTDSAQVLMFSATTPDWVKEISSRYTDKPVSIDAVGNSQTRLATTVNHVSIEVDRDLKAGILEDLIAVHGKGSRAIVFAQTKAECDHLTTS-AFKSVSAQPLHGDMSQKLRDTCIKQFKNHKFQVLVATDVAARGLDISGVDLVVQLNPPFDTDTFVHRSGRTGRAGQKGTAVMLYSAQEFGGIKRLERELG--FRFEKSSPPTTQQVMQAASNVAEHSLSEVNPKVVAYFEDKAQQMAEEVMPEGQEVPAELTNLLSKCLAAISGKKDIQERSILTGKPDMMTVMMKTERQQLEARDAFFVVNKLSNRGSDFSNLLGKIETSQDGMSLVFDMDIEAADSLVETATISPFRDFQFSICEKLPPL 731

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BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A7S2DBW6_9STRA (RNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBW6_9STRA)

HSP 1 Score: 478 bits (1231), Expect = 3.430e-151
Identity = 263/560 (46.96%), Postives = 361/560 (64.46%), Query Frame = 1

Query: 1105 VDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRH--RSSMLEDIITYY-GKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAE-------EESEDKEL--------LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFGGG 2730
            V P+TVA L  +G   FT +Q+  +  +  GRD+I +SRTGTGKTIAFGLP+++ +         R   RGR+PR LV+ PTRELARQV  EL TLG  +     VFHGGA YGPQ  SL +G+DILVATPGRI+DHL RG L L DVRH VLDEADEML+MGF+ DIE + S+VD+   Q LLFSAT PSW++ I+ +Y  +PL +DAVG +  + ATTV H ++ V      R S+LED+IT   G  S  IVFT +K E DEL+ G  F+ L++ VLHGD+SQ QRD T+  F++  F+VLVATDVAARGID+S++D+VVQ   P++ DSYVHR+GRTGRAG+ GV++ LY + + R + ++E  +G GF+F++   P+   V+S A   A   +  V + ++ + ++ A +L  E          ED+ +        L+A+ LA    KT V   S++TGE    T+ + APR L   DV+FAV KL R   FE  +G+I + KDP+ AVFD+ +  A + ++F +EQ+L+   F++C  LP LQ     R+GGG
Sbjct:  149 VHPRTVADLSKKGFTHFTDIQSQAFLPVFEGRDVIARSRTGTGKTIAFGLPIVEAIAASG-----RELDRGRAPRLLVMAPTRELARQVAAELGTLGRAYRFSVAVFHGGAPYGPQEGSLRNGIDILVATPGRILDHLNRGGLKLDDVRHVVLDEADEMLDMGFSKDIEEVLSFVDMDAAQTLLFSATTPSWIQRISAQYMTDPLRLDAVGANEQRTATTVAHKAMLVPDNDEVRMSLLEDVITVEAGVESKTIVFTQTKREADELSSGSAFRVLSAGVLHGDLSQKQRDVTLAQFKSGKFKVLVATDVAARGIDISNVDVVVQTSMPQNSDSYVHRAGRTGRAGKKGVSIVLYTQRQRRGVSRLEHEIGHGFKFQKHTAPTPSTVISAAADNAVAALPVVDETVLSYLKDPASKLYEEIIEKAQSNTPEDEAVDVADATSDLIARLLALATGKTEVKSWSLMTGELGITTLMVKAPRALKQSDVVFAVSKLARHGEFEINIGKIQLGKDPSEAVFDLPSSQALKFMQFVEEQDLQKFAFEVCSELPELQFV-ADRYGGG 702

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BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A7S3ZWQ0_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ0_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 3.900e-145
Identity = 275/632 (43.51%), Postives = 365/632 (57.75%), Query Frame = 1

Query: 1051 VSLVEVGEEGACPVEEKDVDPKTVAA---------LKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFS-------------------------------------YVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEV--SSRHRSSMLEDIITY-------------YGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEE---ESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKL--------GRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFGGG 2730
            V  V VGEE   P  E + DP  +           L  RGI  FT +Q  +Y+ +  GRD++GKSRTGTGKT+AFGLP+I+ L     + +    +RGR P  LV+ PTRELA+QV+ EL+ L  T G     FHGG +YGPQ  +L  G+DILVAT GR++DH+ RG L L+D  H VLDEADEML+MGFADD+E IF                                        + +  Q LLFSAT P W++ +  ++  + + VD VG    + ATTV H ++ V  S+  R+S+LEDII+                 G   IVFT +K ECDELA G  F+ L++QVLHGDI Q QR+ T+  FR   F VLVATDVAARGIDV  +DLVVQ+R PRD + YVHRSGRTGRAGR G AV LY + E RD+R +E+  G   +F+R   PSA +V+  A   A   +  V DD+V  F E+A++L A+E    S++   L+A+CLAA+AR+  +  RS+LTGE D+ T+ M APR L + DV++AV KL        G        VG + + K+P+ AVFD+ +  A +L+ F +EQN     F++C VLP LQ      F GG
Sbjct:   65 VEDVVVGEE-VVPDAEPEKDPMAIEGRISDRQAERLAERGITTFTEIQHRSYEPVFEGRDLLGKSRTGTGKTVAFGLPIIEKLAEMRSNGEYDHKRRGRGPAMLVLTPTRELAKQVHDELKYLADTHGFSTTCFHGGVSYGPQEGALRRGVDILVATVGRVIDHIDRGNLQLNDAYHVVLDEADEMLSMGFADDVERIFGECPAGKAKGMGSGGGAPAPDDAFDLDELLGEEAPPAPVAESRRPQTLLFSATSPGWIKKMTRRFMTDHVFVDVVGDATQQAATTVTHKAVLVPRSNDARASLLEDIISVELSQRQGQVTDEQQNGGGRVIVFTATKRECDELAGGPAFQRLSAQVLHGDIGQSQREATLAQFRRGQFSVLVATDVAARGIDVKGVDLVVQFRTPRDAEGYVHRSGRTGRAGRDGTAVVLYDDREERDVRSLERETG--VKFQRLGPPSAGRVLEAASLDAARALTRVQDDVVPHFLETAKQLCADELAETSDEAASLVARCLAAVARQNELRARSVLTGEADRTTLLMSAPRPLKTSDVVYAVSKLLERVPKQEGATPNDNDRVGAVRVCKEPSQAVFDVRSTTAQRLLAFCEEQNFNKFTFEVCEVLPQLQPQQRRDFNGG 693

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BLAST of Ec-00_001430.1 vs. uniprot
Match: B7G0R3_PHATC (RNA helicase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0R3_PHATC)

HSP 1 Score: 460 bits (1184), Expect = 4.440e-143
Identity = 263/600 (43.83%), Postives = 371/600 (61.83%), Query Frame = 1

Query: 1096 EKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQR----TYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYV---DVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVG-KHVNKLATTVKHLSIEVS--SRHRSSMLEDIITYY--------------------------GKGSHA---------IVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARK-THVTRRSMLTGEPDKVTVQMVAPR--QLTSGDVMFAVGKLGRAAG------FEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFGGGR 2733
            E  +D + +  L  +GI  FTPVQA  +  +++ RD+IG+SRTGTGKT+AFGLP +  L  F  ++ +R      + GR    +++CPTRELARQV  EL  +    GL  +VFHGG +Y PQ R+L  G+D++V TPGR++DH++RG LDLS+   AVLDEADEMLNMGFADD+E +   V   + ++ Q LLFSAT PSWV+ I  +Y  + L +D+   K   ++A TV+HL+++++  +  + S+LEDII                              KG+ A         IVFT +K E DEL  G  FK+LT+Q LHGD+ Q QRD T+ AFR+  F VLVATDVAARGID+ D+DLV+Q+ PPRD D+YVHRSGRTGRAG+ GV+V L+ + + RDI +IE+ +G GF+F+    PSAE  ++ A   +    + + ++  +FF+ESA +LL   ES+D   ++A+CLAA++R+ + V  RS+LTG+    TV+MV  R   + + DVMF +GKL R +       F+  VGRI    +  + VFDM+ E A  LVKFSK  +     F++   L V ++   GR GGGR
Sbjct:  141 EAGLDQRVIDVLSEKGITSFTPVQAEAFGPVMARRDVIGRSRTGTGKTLAFGLPALTRLVTFTTENGKRDARGVMKSGRKVSMIILCPTRELARQVQEELSQVARPLGLFVEVFHGGVSYDPQSRALRQGVDVIVGTPGRVIDHIERGTLDLSECDIAVLDEADEMLNMGFADDVEVVLKNVGSNNPQKTQCLLFSATTPSWVKEIGRQYQKDVLAIDSTADKGGARVAETVRHLAVQLAPGADAKRSVLEDIIAVEISKDADIGKIELEIANPIAAAAHKRKNKGNQAMQQKIFGKTIVFTETKREADELVSGGVFKSLTAQALHGDVGQKQRDSTLAAFRSGAFNVLVATDVAARGIDIQDVDLVIQFDPPRDVDTYVHRSGRTGRAGKKGVSVLLFNQRQSRDIVRIERDLGHGFKFDLVGPPSAEATLNAAAKTSAIATQSIPEETAEFFKESAAKLL---ESQDPVDVVARCLAAVSRRASEVQSRSLLTGQVGFATVEMVNERGRPVAANDVMFTIGKLSRMSNQEGDLAFDSQVGRIQTNSESGSVVFDMNVEDAKNLVKFSKTVDAGGAAFQLLKALAVERDRNFGRMGGGR 737

[Close]

BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A1Z5KKE6_FISSO (RNA helicase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKE6_FISSO)

HSP 1 Score: 455 bits (1171), Expect = 1.180e-141
Identity = 272/595 (45.71%), Postives = 361/595 (60.67%), Query Frame = 1

Query: 1105 VDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQ--RGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIF-----SYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSS--RHRSSMLEDIITYY------------------------------GKGSH--------AIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARK-THVTRRSMLTGEPDKVTVQMVAPRQ-LTSGDVMFAVGKLGRAAG------FEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFG 2724
            +D + +  L +RGI  FT VQ   +D +L+GRD+IG+SRTGTGKT+AFGLP I  L +   + ++   +  RGR P  LV+CPTRELARQV  EL  +    GL  DVFHGG +Y PQ R+LS GLDI+V TPGR+MDHL RG L L++++  VLDEADEMLNMGFA+D+E I      S  D  +C  LLFSAT P WV  I  +Y  N L +DA G    ++A+TV+HL+++V      + ++LEDII                                  K  H         IVF  +K   DEL  G  FK+LT+Q LHGD+SQ QRD T+ AFRA  F VLVATDVAARGID+ D+DLVVQ  PPRD D+YVHRSGRTGRAG  GV+V ++   + RDI +IE+ +G  FRF+    PS E  ++ A   +    +G+ +++   F ESA  LLA+E+ ED   ++A+CLAAI+R+ T V  RS+LTGE   VTVQM+  R+ +   DV+F V KL R +       FE  +G+I +A+D  TA+FDMS E A +LV+FSK+ +     F    +L  ++   G  FG
Sbjct:   98 LDSRVLDVLNSRGITHFTKVQGEAFDPVLAGRDVIGRSRTGTGKTLAFGLPSIARLNKLLANRREANGRLPRGRLPGMLVLCPTRELARQVKDELAAVAEPLGLYVDVFHGGVSYDPQSRALSQGLDIVVGTPGRVMDHLDRGTLSLNELQIVVLDEADEMLNMGFAEDVEVILEGAGKSNKDKTQC--LLFSATTPKWVNEIGRRYQRNVLEIDATGNQDARVASTVRHLAVQVPPGVSAKKAILEDIIAVEISKDAGGDSESATDESENEFHNPVAAAAKKAKKQHLQQKIFGKTIVFCETKKMADELVSGGVFKSLTAQALHGDVSQKQRDATLNAFRAGAFNVLVATDVAARGIDIQDVDLVVQMDPPRDVDTYVHRSGRTGRAGNKGVSVLMFNPQQSRDIVRIERDLGHNFRFQLTGPPSIEAALNAAAKTSALACQGIPEEVSTHFEESAAALLADED-EDPVKVVARCLAAISRRATQVESRSLLTGEVGMVTVQMMNERRSVAPNDVLFTVSKLARLSRESADLTFENDIGKI-LARDDKTAIFDMSLEDAKKLVEFSKDVDAGGNTFS---ILKEMEVERGNNFG 685

[Close]

BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A7S4R924_9STRA (RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R924_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 7.460e-139
Identity = 268/607 (44.15%), Postives = 359/607 (59.14%), Query Frame = 1

Query: 1120 VAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYV---DVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVN-KLATTVKHLSIEVSSRHRS--SMLEDIITY----------YGKGSH----------------------------------AIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKT-HVTRRSMLTGEPDKVTVQMV--APRQLTSGDVMFAVGKLGRAAG-------FEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPV-----------LQEAPGGRFGG 2727
            +  L A+GI +FTPVQ   +  +++GRD+IG+SRTGTGKT+AFGLP I  L    E  Q     RGR P  +++CPTRELARQV+ E+  +    GL + VFHGG +YGPQ  +L  GLDILV TPGR++DHL RG +DLS+V   VLDEADEMLNMGFA+D+E I   V   + K+ Q LLFSAT P WV+ I N+Y  + +++D+       + ATTV+H++I+V   H S  S+LEDII            +GK                                      IVFT +K + DEL  G  FK+LT+Q LHGD+ Q QRD T+ AFRA  F VLVATDVAARGID++D+DLV+Q+ PPRD D+YVHRSGRTGRAGR G +V L+  N+ RDI KIE+ +G GF+FE    PS E  ++ A   +    + V ++   FF ++A  LL  E  ED + ++A+CLAAI+R++  V  RS+LTGE   VTV+M     R ++ GDVMF V KL R +        F+  VG+I    +  +A+FDM  E A +LV+FSK+ +     F +     +                GGR+GG
Sbjct:  112 IDVLSAKGITQFTPVQGEAFAPVVAGRDVIGRSRTGTGKTLAFGLPSITRLTAPDETGQVPPRLRGRKPSMVILCPTRELARQVHEEVAHVARPLGLFSAVFHGGVSYGPQASALRQGLDILVGTPGRVIDHLDRGNIDLSEVDIVVLDEADEMLNMGFAEDVEHILGGVGSANEKKTQFLLFSATTPPWVKEIGNQYQKDVISIDSTSDETGARTATTVRHMAIQVPPGHDSAKSILEDIIAVEISKDIDPHAFGKTKEQEELAAINPIAAXXXXXXXXKNANSAMQQKIFGKTIVFTETKRDADELVSGSIFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDITDVDLVIQFEPPRDVDTYVHRSGRTGRAGRKGTSVLLFRPNQSRDIVKIERSLGHGFKFELAGPPSIEAALTAAAKTSAIACRSVPEETAKFFTDAAGSLL--ENGEDPQEVVARCLAAISRRSSEVQSRSLLTGELGLVTVEMTNNRDRPVSPGDVMFTVSKLSRMSQRGDGNLTFDSDVGKIHSDFETGSAIFDMGVEDAKKLVEFSKDIDAGGAVFSILRERSIERGSNFGQDRRYNRGGGGRYGG 716

[Close]

BLAST of Ec-00_001430.1 vs. uniprot
Match: A0A7S2H5C4_9STRA (RNA helicase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5C4_9STRA)

HSP 1 Score: 447 bits (1150), Expect = 1.840e-138
Identity = 263/573 (45.90%), Postives = 350/573 (61.08%), Query Frame = 1

Query: 1120 VAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYV---DVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVN-KLATTVKHLSIEVSSRHRS--SMLEDIITY------------------------------------------------YGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKT-HVTRRSMLTGEPDKVTVQMVAPR--QLTSGDVMFAVGKLGRAA-------GFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKE 2646
            +  L A+GI  FTPVQ   ++ I++GRD+IG+SRTGTGKT+AF LP I  L    E+ + +   RGR P  +V+CPTRELARQV  E+  +     L + VFHGG +YGPQ  +L  GLDILV TPGRIMDHL RG  DLS+V   VLDEADEMLNMGFA+D+ETI   V   + K+ Q LLFSAT P WV+ I  +Y  + +++DA  +    + ATTV+H++I+V     S  S+LEDII                                                  +GK    IVFT +K + DEL  G  FK+LT+Q LHGD+ Q QRD T+ AFRA  F VLVATDVAARGID++D+DLVVQ+ PPRD D+YVHRSGRTGRAGR G +V L+   + RDI +IE+ +G GF+FE    PS E  +S A   +    +G+ D+  +FF+++A  LL  E+ ED + ++A+CLAAI+R++  V  RS+LTGE   VTV+M   R   ++ GDVMF V KL + +        F+  VG+I    +  +A+FDM  E A +LV+FSK+
Sbjct:  177 IDVLSAKGITTFTPVQGEAFNPIVAGRDVIGRSRTGTGKTLAFTLPSITRLTAPDENGEVKYRGRGRKPSMIVLCPTRELARQVQEEILQVSRPLSLYSTVFHGGVSYGPQASALRQGLDILVGTPGRIMDHLDRGNTDLSEVDIVVLDEADEMLNMGFAEDVETILEGVGSANEKKTQFLLFSATTPPWVKEIGEQYQEDVISIDATSEEAGARTATTVRHMAIQVPPGQDSAKSILEDIIAVEISKDVDPHALGKKKXXXXXLAELNPIAAAXXAEKRKTNANSDMQQKIFGK---TIVFTETKRDADELVSGGVFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDINDVDLVVQFEPPRDTDTYVHRSGRTGRAGRKGTSVLLFRPYQSRDIVRIERSLGHGFKFELAGPPSIESALSAAAKTSAIACRGIPDETANFFQDAASSLL--EDGEDPQQVVARCLAAISRRSAEVQSRSLLTGELGLVTVEMTNSRGRPVSPGDVMFTVSKLSKMSQRGEGDLNFDSDVGKIHADFETGSAIFDMGVEDAKRLVEFSKD 744

The following BLAST results are available for this feature:

BLAST of Ec-00_001430.1 vs. uniprot

BLAST of Ec-00_001430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE98_ECTSI	0.000e+0	100.00	RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D...	[more]
A0A836CKS6_9STRA	3.780e-209	60.18	RNA helicase (Fragment) n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZP19_9STRA	1.700e-170	58.64	RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ...	[more]
A0A7S2V2B9_9STRA	2.450e-157	47.98	RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonic...	[more]
A0A7S2DBW6_9STRA	3.430e-151	46.96	RNA helicase (Fragment) n=1 Tax=Dictyocha speculum...	[more]
A0A7S3ZWQ0_9STRA	3.900e-145	43.51	RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=...	[more]
B7G0R3_PHATC	4.440e-143	43.83	RNA helicase n=1 Tax=Phaeodactylum tricornutum (st...	[more]
A0A1Z5KKE6_FISSO	1.180e-141	45.71	RNA helicase n=1 Tax=Fistulifera solaris TaxID=151...	[more]
A0A7S4R924_9STRA	7.460e-139	44.15	RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49...	[more]
A0A7S2H5C4_9STRA	1.840e-138	45.90	RNA helicase (Fragment) n=1 Tax=Helicotheca tamesi...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1668995..1677492 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	1576.2
Seed ortholog evalue	0.0
Seed eggNOG ortholog	2880.D8LE98
Length	3385
KEGG ko	ko:K16911
KEGG Pathway	ko01110,map01110
Hectar predicted targeting category	chloroplast
Gene id	Ec-00_001430.1
EggNOG free text desc.	helicase activity
EggNOG OGs	COG0513@1,KOG0331@2759
EC	3.6.4.13
COG Functional cat.	L
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01000,ko03009,ko03036

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001430	Ec-00_001430	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 1668995..1677492 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001430.1.12	Ec-00_001430.1.12	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1668995..1669511 -
Ec-00_001430.1.11	Ec-00_001430.1.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1669874..1670031 -
Ec-00_001430.1.10	Ec-00_001430.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1670617..1670901 -
Ec-00_001430.1.9	Ec-00_001430.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1671141..1671200 -
Ec-00_001430.1.8	Ec-00_001430.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1671638..1671912 -
Ec-00_001430.1.7	Ec-00_001430.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1672341..1672500 -
Ec-00_001430.1.6	Ec-00_001430.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1672908..1673093 -
Ec-00_001430.1.5	Ec-00_001430.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1673556..1673666 -
Ec-00_001430.1.4	Ec-00_001430.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1674048..1674311 -
Ec-00_001430.1.3	Ec-00_001430.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1674677..1674877 -
Ec-00_001430.1.2	Ec-00_001430.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1675226..1675762 -
Ec-00_001430.1.1	Ec-00_001430.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1676862..1677492 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001430	3UTR:Ec-00_001430.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 1668995..1669288 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001430.1	CDS:Ec-00_001430.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 1669289..1669511 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001430	5UTR:Ec-00_001430.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 1677174..1677492 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001430.1	Ec-00_001430.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 1669289..1677173 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:1668995..1677492-
coding sequence from alignment at chr_00:1668995..1677492-

mRNA sequence

>Ec-00_001430.1 ID=Ec-00_001430.1|Name=Ec-00_001430.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=924bp
MTSRSSTALAVLGLLAGFVNVDAFSLIPAAPGAVSSSVTRAKTAVASLEP
PARNTWRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILG
DVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSG
LDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSFPAAGRGPPVGGASSDG
QQAWGAPGQQQQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEV
GEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKS
RTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQ
VYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHL
QRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSAT
VPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLE
DIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQ
TIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRT
GRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAG
TVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTH
VTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIA
IAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGR
FGGGRGGGRGGRGRGRGGGGGGYRGNRSSYGGGRGGSYGGGGGYRGGGDR
NGGYRGGRSSYGGGGSGGGSYGGGGGGGYGSRGGGGYGGGGGGSYGGGSY
GGGYGSRGGGGGYSGGGGGNSDW*

spliced messenger RNA

>Ec-00_001430.1 ID=Ec-00_001430.1|Name=Ec-00_001430.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3385bp|location=Sequence derived from alignment at chr_00:1668995..1677492- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GTGCTGGTTCGATGTACTCTGTGTAGTTGCAACGGGGGTATGGATGACTT
TTTCGAGGGAAGAATGCCTCCTTCCATATTTTTTCCTGTCGGGCCACCTC
CCGCCCTCCCCCAAGCCGTCGAGCGTTGCGTCAGCGTACGTCTGCGCCGT
TACCAGGGCACGAGTCAACAACAACCCGTTCGAGAGACCCCCCCCCGAGA
CAAGACTAAGCTTGTGCGACCTTCCTCCGTGACCCATATAGGCCCGCGTC
GCAGGCAGCAGGCTCTCTTGTGTTGTAGCTCAGCTCCCCTGATCAGTGGG
TGTTGACGTTGGGGCAAATATGACCTCTCGAAGCAGCACAGCGCTGGCCG
TGCTTGGCCTCCTGGCGGGGTTCGTAAACGTAGATGCTTTCAGTCTGATT
CCTGCGGCGCCCGGGGCGGTGTCCTCGTCGGTCACCCGCGCGAAGACGGC
GGTGGCCAGCCTCGAGCCTCCGGCGAGGAATACGTGGCGAGCAAGACATG
GTCTCTCAATGAGCTCTACTTCGTCAGCGGTGGAAAATGCAGGAGCCGCG
ACCGGGGAAGTTGACGACAGCAAACCCCCTAGGGCCAGCGTGATGGACGA
GTTGGATGCTATTCTTGGCGACGTGCAGCAGGACTCCGGAACCAAGCCTG
CCTCAGGCGGCGGCATGGGCGCCGCCGCGCCCCTCGACCAGGACCTCGAT
TCCCTCCTCGGGTCTGCAACTTCCGCTCCCCCGGCGACCGCGACGGTGGC
AGCACCGAAGAACAGCGGTTTGGATGACCTAGACCTCGACGATCTGCTCG
GCCCGGGAGCGAACTCTGCGCCACCGCAGCGATATTCGGGCGGGGGCACG
GCCGAGGGGGGAGGGTCGTTCCCCGCCGCGGGCCGCGGGCCGCCGGTCGG
CGGCGCGTCCTCGGACGGGCAGCAGGCGTGGGGTGCGCCTGGTCAGCAGC
AGCAGAGGATGTCGTACAGCGGGGAGTTTGGCGCGGCGAGCGGCAAGTAC
GGCGACACCGCGGCGCGGACGGCGAGCAAGGAGTTGAAGGGGGACCAGAT
GGTCTCCTTGGTGGAGGTGGGGGAAGAGGGGGCGTGCCCCGTGGAGGAGA
AGGACGTGGACCCCAAGACCGTGGCCGCGCTCAAGGCTCGCGGAATCGAG
AAGTTCACCCCCGTCCAGGCCATCACGTACGACCACATCCTGTCGGGGCG
CGACATCATCGGCAAGTCCCGCACCGGTACGGGCAAGACCATCGCCTTCG
GCCTGCCGGTCATCCAGCACCTCGGTCGCTTTGCGGAAGACCACCAGCAG
CGCACTTACCAACGCGGCAGGTCGCCCCGCTTCTTGGTGGTGTGCCCGAC
GCGAGAGCTGGCTCGTCAGGTGTACGGCGAGCTGGAAACTCTGGGCAGCA
CCTTCGGCCTCAAGGCCGATGTCTTCCACGGCGGTGCCGCCTATGGTCCC
CAGATGAGGTCTCTCTCGGACGGCCTCGACATCCTGGTGGCCACGCCCGG
CCGCATCATGGACCACCTCCAGAGGGGTGCCCTCGACCTGTCGGACGTGC
GGCACGCGGTGCTGGACGAGGCCGACGAGATGCTCAACATGGGGTTCGCG
GACGATATCGAGACCATCTTCTCGTATGTCGACGTGAAAGAGTGCCAGGT
GCTGCTGTTCAGCGCCACCGTGCCCAGCTGGGTAAGGAACATCGCCAACA
AGTACACGGCCAACCCGCTCACCGTTGACGCCGTCGGCAAGCACGTGAAC
AAGCTGGCGACGACCGTAAAGCACCTCTCCATCGAGGTGTCGTCTCGGCA
TCGTTCGAGCATGCTCGAGGACATCATCACCTACTACGGCAAGGGCTCGC
ACGCCATCGTGTTCACCAACTCCAAGGCGGAGTGCGACGAGCTTGCCGAC
GGACAAACTTTCAAGACTCTCACGTCTCAGGTCCTCCACGGAGACATCTC
GCAGCACCAGCGCGACCAGACCATCAAGGCCTTCCGCGCCAAGGGCTTCC
AGGTGCTGGTAGCAACGGACGTCGCCGCTCGCGGCATCGACGTGTCGGAC
ATCGACCTGGTCGTCCAGTACCGCCCTCCGCGCGACCCCGATTCTTACGT
GCACCGCTCCGGCCGCACGGGAAGGGCCGGGCGCCCCGGAGTGGCGGTTA
CACTCTACGCCGAGAACGAGATCCGCGACATCCGCAAGATCGAGCAGGGG
GTGGGCCAGGGCTTCCGCTTCGAGCGGGGAGCGGTGCCGTCCGCGGAACA
GGTCATGTCTCTCGCGGGGACGGTCGCCCGCGAGCAGATCAAGGGGGTGA
GCGACGACATGGTGGACTTTTTCAGGGAGTCGGCGCAGGAGCTTCTCGCC
GAAGAAGAGTCGGAGGACAAGGAACTTCTGCTTGCCAAGTGCTTGGCGGC
CATCGCCCGCAAGACCCACGTCACGAGGAGATCCATGTTGACGGGAGAGC
CAGACAAGGTCACCGTCCAGATGGTGGCGCCCCGCCAGCTCACCTCCGGC
GACGTCATGTTCGCTGTGGGCAAGCTCGGCCGCGCGGCGGGCTTCGAGCC
GATGGTTGGCAGGATCGCCATCGCCAAGGACCCCACGACGGCGGTGTTCG
ACATGTCCACTGAGGCCGCCGACCAGCTCGTCAAGTTCAGCAAGGAGCAG
AACTTGGAGAGCATCGAGTTCAAGATGTGCCCCGTGCTGCCCGTGCTTCA
GGAAGCACCGGGAGGACGGTTTGGTGGAGGTCGGGGAGGTGGCCGCGGCG
GGCGTGGACGCGGACGCGGCGGCGGCGGCGGCGGTTACAGGGGCAACCGA
TCATCGTACGGCGGTGGAAGGGGTGGATCGTACGGTGGCGGAGGGGGGTA
CCGCGGGGGCGGAGACAGAAACGGTGGATACCGGGGCGGGCGATCATCGT
ACGGCGGTGGCGGCAGCGGCGGAGGCTCGTACGGAGGCGGGGGCGGGGGC
GGTTACGGCTCGCGCGGCGGCGGTGGCTACGGTGGTGGTGGTGGTGGAAG
CTATGGAGGAGGCAGCTATGGCGGTGGTTACGGATCGCGCGGTGGGGGGG
GAGGCTACTCGGGCGGTGGCGGGGGTAACTCGGACTGGTAAATGGCGCCA
TGTAGTACGGGGCCTTTTGGGTTGATTGTTGCTTCGGTGTTGAACCGCAA
GTGACAAACCAGGGTGATTGATTGCCCGCTTCGCTGGCGGTTGTAAGCAG
ACGTTGCTGCGCAGGTTACGCGAGTACGAAGAACACCGTGATCCCGTGCC
GTTGTATGCATATTGCCATTTATGCGCTCGGGCCCGGACTCGTGGGGGAC
GAGGATGTTGGTGGTGGACAGCTCAAAATTTCTGCCACAAATTGTCCACG
TTTTTGGACCTTGCGGTGATTTCCGAGAGAAATAA

protein sequence of Ec-00_001430.1

>Ec-00_001430.1 ID=Ec-00_001430.1|Name=Ec-00_001430.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=924bp
MTSRSSTALAVLGLLAGFVNVDAFSLIPAAPGAVSSSVTRAKTAVASLEP
PARNTWRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILG
DVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSG
LDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSFPAAGRGPPVGGASSDG
QQAWGAPGQQQQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEV
GEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKS
RTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQ
VYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHL
QRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSAT
VPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLE
DIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQ
TIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRT
GRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAG
TVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTH
VTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIA
IAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGR
FGGGRGGGRGGRGRGRGGGGGGYRGNRSSYGGGRGGSYGGGGGYRGGGDR
NGGYRGGRSSYGGGGSGGGSYGGGGGGGYGSRGGGGYGGGGGGSYGGGSY
GGGYGSRGGGGGYSGGGGGNSDW*

mRNA from alignment at chr_00:1668995..1677492-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_001430.1 ID=Ec-00_001430.1|Name=Ec-00_001430.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8498bp|location=Sequence derived from alignment at chr_00:1668995..1677492- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GTGCTGGTTCGATGTACTCTGTGTAGTTGCAACGGGGGTATGGATGACTT
TTTCGAGGGAAGAATGCCTCCTTCCATATTTTTTCCTGTCGGGCCACCTC
CCGCCCTCCCCCAAGCCGTCGAGCGTTGCGTCAGCGTACGTCTGCGCCGT
TACCAGGGCACGAGTCAACAACAACCCGTTCGAGAGACCCCCCCCCGAGA
CAAGACTAAGCTTGTGCGACCTTCCTCCGTGACCCATATAGGCCCGCGTC
GCAGGCAGCAGGCTCTCTTGTGTTGTAGCTCAGCTCCCCTGATCAGTGGG
TGTTGACGTTGGGGCAAATATGACCTCTCGAAGCAGCACAGCGCTGGCCG
TGCTTGGCCTCCTGGCGGGGTTCGTAAACGTAGATGCTTTCAGTCTGATT
CCTGCGGCGCCCGGGGCGGTGTCCTCGTCGGTCACCCGCGCGAAGACGGC
GGTGGCCAGCCTCGAGCCTCCGGCGAGGAATACGTGGCGAGCAAGACATG
GTCTCTCAATGAGCTCTACTTCGTCAGCGGTGGAAAATGCAGGAGCCGCG
ACCGGGGAAGTTGACGACAGCAAACCCCCTAGGGCCAGCGTGATGGACGA
GTTGGATGCTATTCTTGGCGACGTGCAGCAGGTGAGGGACTCGCCATCGG
ATACGTGCGACAGGGTGCTCTCTCGGGGCCTGCGTGGGTGCTCGTAAATT
TTGTCTGGGTGCGATGAACCTGTGGGTCGATGGCGCGCCCGTTTCGGCGC
GCCGCAGGTTGACGTTGCCCTCGCACCCAGCCAACCAATGCACATCGAAG
TCGGCGATCGAGACGCCAGCAGCGTAGCTTCGTGAGTTTCCCAGGCCCCC
TTGCGCAGCTTATGAGGCTGCTGTGTTGCGGGGTGGTAGCGGTTAGTGTT
GTCTCCTGCTGTGGTATTTGATCTCCTTTTTTCGGGTGGGTGGGTGTCCA
CGGACCATTCACCCTTTGATGTACGCATGCAATTGGAAATCACACGTGTA
CACAGCAGCCAGCAGCAGTGGCACACATCGTGCGAGCCGCACGTTTGTGC
ACTTCCCCGAAGACATCAAGTTGGAGCCCTCTAGGATAAGATGAAGTGGG
TGCTTTCTTGGTTCAGTTGTAGTCGGCAGCTATGCCCTTTGGTGAATGCC
CAAGAGGAAAGGGCCATCATCATGTGTCCCATCATCATGTGTCGCTGTCT
GCATGTATGTGTGGACTACATACGCTGGTCTGACTCCATCTCCGAACATA
GAATGTTCAATCTGGCACGTACCGAGTGACGAGCTCGCCCCAACAATCAC
CTGTTGAACGTCGCCCTGTCAGCACCACCTCTTGGCCTCCTCGAGGCTCC
ATTTCGGCGATGTGCCGTTTCTAATTGGTCGTATTTGTACATTGTCGCGT
TGCAAAATGTAACTTGTTGGGTCCGCCGTCCCTTCCAACCTCCATTGCGA
ACATGGTAACTGACTGGAACCTTGGTTACTGCCTGCGCCAAGACTACACG
AGCGTCAGCAGTGACATACGTAGCCTGCATGTTGGCACACCCAGCAGTTC
TCCTCAGCCCCTCCCATCCCTGTCTCAAGCTCCCATCGTTGCATGATACT
TCGCAGCACTGCATTCCATTCCGGATGCCCCTTCCCTTTCCCAGTGCTTC
TATACCCCTCCCTCACCACATGTGCGTACCCCCCCTCCCCCCCCGCCTCC
CGACACTTTCGACGCCTTGGACTGCTTCAGGACTCCGGAACCAAGCCTGC
CTCAGGCGGCGGCATGGGCGCCGCCGCGCCCCTCGACCAGGACCTCGATT
CCCTCCTCGGGTCTGCAACTTCCGCTCCCCCGGCGACCGCGACGGTGGCA
GCACCGAAGAACAGCGGTTTGGATGACCTAGACCTCGACGATCTGCTCGG
CCCGGGAGCGAACTCTGCGCCACCGCAGCGATATTCGGGCGGGGGCACGG
CCGAGGGGGGAGGGTCGTTCCCCGCCGCGGGCCGCGGGCCGCCGGTCGGC
GGCGCGTCCTCGGACGGGCAGCAGGCGTGGGGTGCGCCTGGTCAGCAGCA
GCAGAGGATGTCGTACAGCGGGGAGTTTGGCGCGGCGAGCGGCAAGTACG
GCGACACCGCGGCGCGGACGGCGAGCAAGGAGTTGAAGGGGGACCAGATG
GTCTCCTTGGTGGAGGTGGGGGAAGAGGGGGCGTGCCCCGTGGAGGAGAA
GGACGTGGACCCCAAGACCGTGGCCGCGCTCAAGGCTCGCGGAATCGAGA
AGTTCACCCCCGTCCAGGTGGGAGAGCGACGACACGGCCGGTTCGGTCTG
GTGGTTACATCGTACATATGACGAACTAAGCGTGTTCGTGTTGAGTGTCG
TTACCGTATCTGCCCGGGCGTCTTTGCTGCGTATAAGCTTTTTTTACGCC
TGTGGGTATCTCGATTGTTTCTCCTCGCCGGGTATTGGTTCTAATTCCTC
ACGAGACACGGAAGTTTGTTGTGGCACGAAATGCTGGTCGGCAACCCTTG
GTGGCGTTTTCGTCGCCGAAGCAACCACCGCGTTCTCCAACAGATGACAA
CACTCACAGCACCGAACGAGTGAATACTCTCCTCACGTGACGATTGTTGT
TTTCCCCGCGCACAGGCCATCACGTACGACCACATCCTGTCGGGGCGCGA
CATCATCGGCAAGTCCCGCACCGGTACGGGCAAGACCATCGCCTTCGGCC
TGCCGGTCATCCAGCACCTCGGTCGCTTTGCGGAAGACCACCAGCAGCGC
ACTTACCAACGCGGCAGGTCGCCCCGCTTCTTGGTGGTGTGCCCGACGCG
AGAGCTGGCTCGTCAGGTGTGGTGGGATTGATTGGGTCTACGGGGTTGGT
ATCAATTTTTGTTGTTGTGATGGATTGGGTTCGACTGCTCTCCTCTTCGT
GTCGGCCAGCCTTGTTTCGTCATCGCAGCGTTGGGTCTTCCTTTCGGTGC
TGGCTACGCGTGTACAAACAGCGTAAGCCCAATATTCCCCCACAAGCTTT
TGTTGGTACATGATGGCGCGATGGTTGGGTCCCCTTGGAAGTTCTTCTTT
GTACACCATACAAGCATCCTTTACACCCTCGGCAAGGATTACAACAAGCA
CTACGTCTGTGTTGTGTCTGAAAACTCTCTCACCCCCTAACGGTAATCCT
CCTCCCGCGCGTCGCAAACACCGCACGCCAGGTGTACGGCGAGCTGGAAA
CTCTGGGCAGCACCTTCGGCCTCAAGGCCGATGTCTTCCACGGCGGTGCC
GCCTATGGTCCCCAGATGAGGTCTCTCTCGGACGGCCTCGACATCCTGGT
GGCCACGCCCGGCCGCATCATGGACCACCTCCAGAGGGGTGCCCTCGACC
TGTCGGACGTGCGGCACGCGGTGCTGGACGAGGCCGACGAGATGCTCAAC
ATGGGGTTCGCGGACGATATCGAGACCATCTTCTCGTATGTCGACGTGAG
TGAATAGCAAGGCTGAGTTGTGGCGTTGGTTCGGGGGGGGGGCTGCAGTT
GGTGGGCATGCCTCGGGAAGTTTTGTTTTGTGTGGTGGGAGAAAGAAGGG
TTTCGCGTGAGCTGGGTGGTGCTATAGCATGGCATCCAATTAAAGGAACG
CCAGGTGCTTCGCACGACTCATCGTCTCCTGTGATTGTCATCCATGTGAC
CGAGAACAGAGCTTGTGAGGACAGCATTCGCATGCAGATTCGTCAGGAAT
AGGATGTCAGAATACTCTGCACGTTTTGCCGCGGACGGTGGAATGCCTGC
TTAGCTATTCTTGTGCGAGTATGAAAACAAGTTGTGGATGATGTTCGCGA
TCGACTTTTTGTTTTTATGGCGGCAGGTGAAAGAGTGCCAGGTGCTGCTG
TTCAGCGCCACCGTGCCCAGCTGGGTAAGGAACATCGCCAACAAGTACAC
GGCCAACCCGCTCACCGTTGACGCCGTCGGCAAGCACGTGAGTACGCATT
GTGTCGACGATGTTTGTTTGTTCACCGCGCACCCAAGGTGATTCTCTTGA
CCGATGTCCCCGACGTGCTTGAATGGAGATTGTTCCCACTGATATTGCTG
TTGCTCTTGTCTTCACACCGAGCACCCTTCTGATCTGTGTCAAGTTCTTT
CAATTCCGTGGTACTTGTAATCAAGCTGTGGGAGCGAATTTTCGTGATTG
CATACGATAACATGAGTGCCGTGCTCACTCGTCTTGTTATCCGAGAATAC
AGGATACGGCACGTGACAAGAAGCCCCTTCTGTCTTGTACTCTCACCGAT
TTTCCCGCGAAAGGTCGGGTCGCTGAGTAGGAGTCGGCCGACCGCCATCA
CCTTTTCGTAGGACTGGCAAAGAGCCCGCTGCTGGGCAGAAGCGATGTCG
TAAATTTCGGCAAGCACCTAATCCCGCGTCCTTTCATTTTTCATGACAGG
TGAACAAGCTGGCGACGACCGTAAAGCACCTCTCCATCGAGGTGTCGTCT
CGGCATCGTTCGAGCATGCTCGAGGACATCATCACCTACTACGGCAAGGG
CTCGCACGCCATCGTGTTCACCAACTCCAAGGCGGAGTGCGACGAGCTTG
CCGACGGACAAACTTTCAAGACTCTCACGTCTCAGGTACACAGGCAGCGA
CTGGTCCTTTGCTTCCGACTAGCCCACATACACTAGTGAGAGACGTGCAG
GCGGGAAAGGGTGCATATACCTTTTTTGTTGGGTTGTGCTAGGGTGTGTG
TGGTGCCGAGGGTCAGACAAACCATTTTCATTGAGTGGGCATGCAGCCGT
CTGGAGGCACACTTTGCTGTAGAACGACGCAACGGGACAACCGCGTCACC
ATTCACAGCCTTTTGGTGGGGAGGATGACGATGTAGTTTGCCGTGGAGAC
ACCCCTCCCTTGCCCGTTAGACCCGAGATCCACTGACAATGGCAGAATCA
CGTCCCCGACTCGGGGCACGAACATAACAACGCTCACTCACTTGTGTAAC
CTGGCGCCCACCCTTGTATCTTTTTTTTTTTTTTGTCGCAAGGTCCTCCA
CGGAGACATCTCGCAGCACCAGCGCGACCAGACCATCAAGGCCTTCCGCG
CCAAGGGCTTCCAGGTGCTGGTAGCAACGGACGTCGCCGCTCGCGGCATC
GACGTGTCGGACATCGACCTGGTCGTCCAGTACCGCCCTCCGCGCGACCC
CGGTAAGGACAGAGACAAGAAGATGACAAGCCATGCGCACCAAGTTTGCA
TGGAAGGCGTGTAGGTGTACCAGTGACTGGCTGCGTTTTTGTGCTCGGAG
TCCGCGCGTTGGTTGATTCTAGCGTCCTGTGAAAGTTCTTTTTGTGTTTT
CTTTACTCTCCCGTCACCGTCGGGCGGGGTTTTTGTGTTATTCTTCTTGT
CTCTGACGCGTGTCTTGAGCGTCGCAGTTACAGTGAGGCACAAGTCTTTC
GCTCGCCTATTCTCTTTTTTCGCTCTTTGCCCCACGCCCCCTCTCTCCTG
GTCGGCCGACCTCTCACTTACCACCACAGACACCCACCCACCCTGCTCCA
GTCTCCCAGACCTTTCTCAAGCCGTGCTTATTCTTCCTCTGCATTGTCGT
CTCTCAATTCCTTGATCTTTTTTTTTTCAGATTCTTACGTGCACCGCTCC
GGCCGCACGGGAAGGGCCGGGCGCCCCGGAGTGGCGGTTACACTCTACGC
CGAGAACGAGATCCGCGACATCCGCAAGATCGAGCAGGGGGTGGGCCAGG
GCTTCCGCTTCGAGCGGGGAGCGGTGCCGTCCGCGGAACAGGTCATGTCT
CTCGCGGGGACGGTCGCCCGCGAGCAGATCAAGGGGGTGAGCGACGACAT
GGTGGACTTTTTCAGGGAGTCGGCGCAGGAGCTTCTCGCCGAAGAAGAGT
CGGAGGTGAGTGAGAAGAGCAAGGGCGCTGCTCGAGAAGAGAAGTGTATT
GACAAGGAGTTGGAGGTTCCGGCCCGAGGTGTCGTGTTCGGGACTTGTGA
CGAGGGGGCTGGGTCGAGAAGGTACAAGTATAAGGCTTTGGAGTTTCCGG
CCCGTGTTTTGGGACTCGCGTGTCATGCTTTTCTTTCTGGGTCTCCTGTG
CGTCCGCGGCCTCGATGTAGGTTGTAGCGAGCGGTAGCTGGTGCGATTAC
TTGCGACAGGCAGCGAAAGCGTGAAATTTGGTCACCTGCGTTGTTGCCAA
CCCCCCCCCCGCGCGCGCAGCAAGAATCATCGGCCTTTGCTTGTCAAGTG
TTTTCTCTCGTACGGAGGTGTGTTCTTGGTTCTTGTGGGTTACGGTCCTC
ACGGTATATCTGTTCGCGCTCGCGCCCCTTGGTGGAACACAGGACAAGGA
ACTTCTGCTTGCCAAGTGCTTGGCGGCCATCGCCCGCAAGACCCACGTCA
CGGTAAGTCCAGATAGAGCACGGCATATCCAGGGTGCTACTCTACGACAC
ATCCAATGCTTCTTGCGCGACTGGTGGAACTAGATTAGTTCATGACGCAG
GACTTGCCGTGCCTCGTGCAAATGTATTGGCTGAACTCTCCCACAAGGTA
CACCTCATGAAGTTGTTCGTATTCCTTGGTTGCCTCGACATCCGTCTCAC
GCCACCTTGAAAAAAAAAATCTTCCTCGTCGATCACCACAGAGGAGATCC
ATGTTGACGGGAGAGCCAGACAAGGTCACCGTCCAGATGGTGGCGCCCCG
CCAGCTCACCTCCGGCGACGTCATGTTCGCTGTGGGCAAGCTCGGCCGCG
CGGCGGGCTTCGAGCCGATGGTTGGCAGGATCGCCATCGCCAAGGACCCC
ACGACGGCGGTGTTCGACATGTCCACTGAGGCCGCCGACCAGCTCGTCAA
GTTCAGCAAGGAGCAGAACTTGGAGAGCATCGAGTTCAAGATGTGCCCCG
TGCTGCCCGTGCTTCAGGAAGCACCGGTAAGGAGGCGTTTTTGGGGTTAG
TTTTGAGGGCAGGTTTCGTTTTTTTCCCCGCGGTGTTCGGCTGTGTGCTC
GAGGAATTAAGGGGCAGCAGTAATTCGGGCAATCACGTTTCACCTCTCAC
CACAGCAGTCAGTTTTGGTCTCCCAAGCAGTTCGAACAGTACGTCCCGAA
TGGGATGCCCTCGTTCCTGTGCGGTGCTTCTTTTTTAGGTCGCCATGGCG
ACATCAGACATGTTTCTTTGCCCATCAAAGCCATGCCCTCCGCTATCGGC
TACGTCCTCAACTCGTCTCTCGATCGTGGTTTCCGCGCCGAAAGCCTCAT
TTGACAAAAAAAATAGTGTACTTGACGTTTAGTGCTCACCTGTTGCTCGT
TTCCATAGTACTCAAGGACCAACCTTTGGTATCTATGTAACTTTGCAACA
CCAACGCCTGTCGTCTTGCTGTGAAGTTGTGGACGGGCTTCGCCAGCAAA
ATTGTCCCCAGACGCGATGCATTTTCACTTGTTTCTATTCCTTTTGCACC
GAACACCTGTCCCGGACTTTTGTTTCTAATCCTTTTGCACCCCAACGCCT
GTCCTGAACAGGGAGGACGGTTTGGTGGAGGTCGGGGAGGTGGCCGCGGC
GGGCGTGGACGCGGACGCGGCGGCGGCGGCGGCGGTTACAGGGGCAACCG
ATCATCGTACGGCGGTGGAAGGGGTGGATCGTACGGTGGCGGAGGGGGGT
ACCGCGGGGGCGGAGACAGGTAAGAAAGGACATCTGTGGACAGGGGGGCG
CAGGCAAGCCAAGTCCTCCCCCTATCTCTTCTGTAGTCAAGTGGCCGCGG
TTGTGTGCGCAAAGTGGCTGTCTGCGGGTTCTCTTGGTCTGATTATGGGC
TTTCGCGGTGAGGTCTATCCCGTGTGCAAGTTTTCACGGCCCAATTTTAC
GGGGAATCTGTGAATAGCGCGATCATGCCGTCTGTGACTCGCACCGACTA
GACTACTCACCTCCTCCCTGTTCCTTTTCTTGAACGCATAGCTCACTAGG
CCATCCCTCCATGCACTTGTTCGTTTCTCATGTCGTCGTTCCCCTCCCCG
ACATTTCCCTTTCCCTTTTGATGGACTTTAGAAACGGTGGATACCGGGGC
GGGCGATCATCGTACGGCGGTGGCGGCAGCGGCGGAGGCTCGTACGGAGG
CGGGGGCGGGGGCGGTTACGGCTCGCGCGGCGGCGGTGGCTACGGTGGTG
GTGGTGGTGGAAGCTATGGAGGAGGCAGCTATGGCGGTGGTTACGGATCG
CGCGGTGGGGGGGGAGGCTACTCGGGCGGTGGCGGGGGTAACTCGGACTG
GTAAATGGCGCCATGTAGTACGGGGCCTTTTGGGTTGATTGTTGCTTCGG
TGTTGAACCGCAAGTGACAAACCAGGGTGATTGATTGCCCGCTTCGCTGG
CGGTTGTAAGCAGACGTTGCTGCGCAGGTTACGCGAGTACGAAGAACACC
GTGATCCCGTGCCGTTGTATGCATATTGCCATTTATGCGCTCGGGCCCGG
ACTCGTGGGGGACGAGGATGTTGGTGGTGGACAGCTCAAAATTTCTGCCA
CAAATTGTCCACGTTTTTGGACCTTGCGGTGATTTCCGAGAGAAATAA

Coding sequence (CDS) from alignment at chr_00:1668995..1677492-

>Ec-00_001430.1 ID=Ec-00_001430.1|Name=Ec-00_001430.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2772bp|location=Sequence derived from alignment at chr_00:1668995..1677492- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACCTCTCGAAGCAGCACAGCGCTGGCCGTGCTTGGCCTCCTGGCGGG
GTTCGTAAACGTAGATGCTTTCAGTCTGATTCCTGCGGCGCCCGGGGCGG
TGTCCTCGTCGGTCACCCGCGCGAAGACGGCGGTGGCCAGCCTCGAGCCT
CCGGCGAGGAATACGTGGCGAGCAAGACATGGTCTCTCAATGAGCTCTAC
TTCGTCAGCGGTGGAAAATGCAGGAGCCGCGACCGGGGAAGTTGACGACA
GCAAACCCCCTAGGGCCAGCGTGATGGACGAGTTGGATGCTATTCTTGGC
GACGTGCAGCAGGACTCCGGAACCAAGCCTGCCTCAGGCGGCGGCATGGG
CGCCGCCGCGCCCCTCGACCAGGACCTCGATTCCCTCCTCGGGTCTGCAA
CTTCCGCTCCCCCGGCGACCGCGACGGTGGCAGCACCGAAGAACAGCGGT
TTGGATGACCTAGACCTCGACGATCTGCTCGGCCCGGGAGCGAACTCTGC
GCCACCGCAGCGATATTCGGGCGGGGGCACGGCCGAGGGGGGAGGGTCGT
TCCCCGCCGCGGGCCGCGGGCCGCCGGTCGGCGGCGCGTCCTCGGACGGG
CAGCAGGCGTGGGGTGCGCCTGGTCAGCAGCAGCAGAGGATGTCGTACAG
CGGGGAGTTTGGCGCGGCGAGCGGCAAGTACGGCGACACCGCGGCGCGGA
CGGCGAGCAAGGAGTTGAAGGGGGACCAGATGGTCTCCTTGGTGGAGGTG
GGGGAAGAGGGGGCGTGCCCCGTGGAGGAGAAGGACGTGGACCCCAAGAC
CGTGGCCGCGCTCAAGGCTCGCGGAATCGAGAAGTTCACCCCCGTCCAGG
CCATCACGTACGACCACATCCTGTCGGGGCGCGACATCATCGGCAAGTCC
CGCACCGGTACGGGCAAGACCATCGCCTTCGGCCTGCCGGTCATCCAGCA
CCTCGGTCGCTTTGCGGAAGACCACCAGCAGCGCACTTACCAACGCGGCA
GGTCGCCCCGCTTCTTGGTGGTGTGCCCGACGCGAGAGCTGGCTCGTCAG
GTGTACGGCGAGCTGGAAACTCTGGGCAGCACCTTCGGCCTCAAGGCCGA
TGTCTTCCACGGCGGTGCCGCCTATGGTCCCCAGATGAGGTCTCTCTCGG
ACGGCCTCGACATCCTGGTGGCCACGCCCGGCCGCATCATGGACCACCTC
CAGAGGGGTGCCCTCGACCTGTCGGACGTGCGGCACGCGGTGCTGGACGA
GGCCGACGAGATGCTCAACATGGGGTTCGCGGACGATATCGAGACCATCT
TCTCGTATGTCGACGTGAAAGAGTGCCAGGTGCTGCTGTTCAGCGCCACC
GTGCCCAGCTGGGTAAGGAACATCGCCAACAAGTACACGGCCAACCCGCT
CACCGTTGACGCCGTCGGCAAGCACGTGAACAAGCTGGCGACGACCGTAA
AGCACCTCTCCATCGAGGTGTCGTCTCGGCATCGTTCGAGCATGCTCGAG
GACATCATCACCTACTACGGCAAGGGCTCGCACGCCATCGTGTTCACCAA
CTCCAAGGCGGAGTGCGACGAGCTTGCCGACGGACAAACTTTCAAGACTC
TCACGTCTCAGGTCCTCCACGGAGACATCTCGCAGCACCAGCGCGACCAG
ACCATCAAGGCCTTCCGCGCCAAGGGCTTCCAGGTGCTGGTAGCAACGGA
CGTCGCCGCTCGCGGCATCGACGTGTCGGACATCGACCTGGTCGTCCAGT
ACCGCCCTCCGCGCGACCCCGATTCTTACGTGCACCGCTCCGGCCGCACG
GGAAGGGCCGGGCGCCCCGGAGTGGCGGTTACACTCTACGCCGAGAACGA
GATCCGCGACATCCGCAAGATCGAGCAGGGGGTGGGCCAGGGCTTCCGCT
TCGAGCGGGGAGCGGTGCCGTCCGCGGAACAGGTCATGTCTCTCGCGGGG
ACGGTCGCCCGCGAGCAGATCAAGGGGGTGAGCGACGACATGGTGGACTT
TTTCAGGGAGTCGGCGCAGGAGCTTCTCGCCGAAGAAGAGTCGGAGGACA
AGGAACTTCTGCTTGCCAAGTGCTTGGCGGCCATCGCCCGCAAGACCCAC
GTCACGAGGAGATCCATGTTGACGGGAGAGCCAGACAAGGTCACCGTCCA
GATGGTGGCGCCCCGCCAGCTCACCTCCGGCGACGTCATGTTCGCTGTGG
GCAAGCTCGGCCGCGCGGCGGGCTTCGAGCCGATGGTTGGCAGGATCGCC
ATCGCCAAGGACCCCACGACGGCGGTGTTCGACATGTCCACTGAGGCCGC
CGACCAGCTCGTCAAGTTCAGCAAGGAGCAGAACTTGGAGAGCATCGAGT
TCAAGATGTGCCCCGTGCTGCCCGTGCTTCAGGAAGCACCGGGAGGACGG
TTTGGTGGAGGTCGGGGAGGTGGCCGCGGCGGGCGTGGACGCGGACGCGG
CGGCGGCGGCGGCGGTTACAGGGGCAACCGATCATCGTACGGCGGTGGAA
GGGGTGGATCGTACGGTGGCGGAGGGGGGTACCGCGGGGGCGGAGACAGA
AACGGTGGATACCGGGGCGGGCGATCATCGTACGGCGGTGGCGGCAGCGG
CGGAGGCTCGTACGGAGGCGGGGGCGGGGGCGGTTACGGCTCGCGCGGCG
GCGGTGGCTACGGTGGTGGTGGTGGTGGAAGCTATGGAGGAGGCAGCTAT
GGCGGTGGTTACGGATCGCGCGGTGGGGGGGGAGGCTACTCGGGCGGTGG
CGGGGGTAACTCGGACTGGTAA

Synonyms

The feature 'Ec-00_001430.1' has the following synonyms


Synonym
Esi0013_0100
Esi_0013_0100