Ec-00_001420.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001420.1
Unique NameEc-00_001420.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length405
Homology
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BLAST of Ec-00_001420.1 vs. uniprot
Match: D8LE97_ECTSI (Cell division cycle 123 homolog (S. cerevisiae) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE97_ECTSI)

HSP 1 Score: 803 bits (2073), Expect = 7.720e-293
Identity = 404/445 (90.79%), Postives = 404/445 (90.79%), Query Frame = 1 
Query:    1 MVPNVGAGDTSEDAVQELNNTEAAAAAAETPEPSGVSPAPTQGHVLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQMSCGEGVRDDSDDEVDWGNEDEDEQDRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVNGGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGV-----------------------------------------ADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSEDSLAAPLPPRPPTLDRGEETLPPGVAMRIHFDPSSTHGDQASSTPSGTVAARSNDPSDSQQGPPGGRTRATGVLERATGITLAGGGEGRDFEFRCVPSSLHMVPDPMGRYRGPADVGMGTLACGTGGNGGLELEDLIESCRLAEKDD 1212
            MVPNVGAGDTSEDAVQELNNTEAAAAAAETPEPSGVSPAPTQGHVLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQMSCGEGVRDDSDDEVDWGNEDEDEQDRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVNGGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGV                                         ADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSEDSLAAPLPPRPPTLDRGEETLPPGVAMRIHFDPSSTHGDQASSTPSGTVAARSNDPSDSQQGPPGGRTRATGVLERATGITLAGGGEGRDFEFRCVPSSLHMVPDPMGRYRGPADVGMGTLACGTGGNGGLELEDLIESCRLAEKDD
Sbjct:    1 MVPNVGAGDTSEDAVQELNNTEAAAAAAETPEPSGVSPAPTQGHVLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQMSCGEGVRDDSDDEVDWGNEDEDEQDRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVNGGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVCQRDCTSYYGFLEEEADRLSTLLEEFFAAEVCKKFADPDCVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSEDSLAAPLPPRPPTLDRGEETLPPGVAMRIHFDPSSTHGDQASSTPSGTVAARSNDPSDSQQGPPGGRTRATGVLERATGITLAGGGEGRDFEFRCVPSSLHMVPDPMGRYRGPADVGMGTLACGTGGNGGLELEDLIESCRLAEKDD 445
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BLAST of Ec-00_001420.1 vs. uniprot
Match: A0A8D0L088_STROC (Cell division cycle protein 123 homolog n=2 Tax=Neognathae TaxID=8825 RepID=A0A8D0L088_STROC)

HSP 1 Score: 205 bits (521), Expect = 6.660e-60
Identity = 105/214 (49.07%), Postives = 133/214 (62.15%), Query Frame = 1 
Query:  133 VLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQMSCGEGVRDDSDDEVDWGNEDEDEQDRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSE 771
            V++CQF  W+P+F+  T RSV+L LPE+V  YL  DG ++  G         R+D       GN+D +E   P+FP+  A + +AI+SLGG+VFPKLNWS P+DA W+    SLKCK   D+  L KSS FI+ DL   F  CT  S      + LVLRKWC L P   FRCFV+E +L+ V DVY D+R R WL+D NPF  VTDSLLF W E
Sbjct:    6 VVHCQFSVWYPLFRAVTIRSVILPLPENVKEYLLDDGTLVVSG---------REDPPSHAQEGNDDAEEIQAPEFPEFTAKVQEAISSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKALSDIFLLFKSSDFITRDLTQPFIHCTDDSPDPSLDYELVLRKWCELIPGAEFRCFVKENKLIVVFDVYRDSRGRTWLIDFNPFGEVTDSLLFTWEE 210
[Close]
BLAST of Ec-00_001420.1 vs. uniprot
Match: A0A2U4B6W9_TURTR (Cell division cycle protein 123 homolog n=17 Tax=Eutheria TaxID=9347 RepID=A0A2U4B6W9_TURTR)

HSP 1 Score: 200 bits (509), Expect = 5.640e-58
Identity = 99/218 (45.41%), Postives = 136/218 (62.39%), Query Frame = 1 
Query:  130 HVLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQ--MSCGEGVRDDSDDEVDWGNEDEDEQ-DRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSE 771
            HVL+CQF  W+P+F+  T +SV+L LP++V  YL  DG ++  G +   +C +   D+  +E+ W +++       P+FP+    + +AI SLGG+VFPKLNWS P+DA W+    SLKCK   D+  L KSS FI+ D    F  CT  S      + LVLRKWC L P   FRCFV+E +L+ V D+Y D+R +VWL+D NPF  VTD+LLF W E
Sbjct:    5 HVLHCQFSAWYPLFRSLTIKSVILPLPQNVKDYLLDDGTLVVSGREDPPTCSQPDSDNEAEEIQWSDDENTATLTAPEFPEFTTKVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFIHCTDDSPDPCMEYELVLRKWCELIPGAEFRCFVKENKLIVVFDIYRDSRGKVWLIDFNPFGEVTDALLFTWDE 222
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BLAST of Ec-00_001420.1 vs. uniprot
Match: UPI000739B9FE (cell division cycle protein 123 homolog isoform X2 n=2 Tax=Neognathae TaxID=8825 RepID=UPI000739B9FE)

HSP 1 Score: 199 bits (505), Expect = 2.220e-57
Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 1 
Query:  133 VLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQ---MSCGEGVRDDSDDEVDWGNEDEDEQDR-PDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSE 771
            V +CQF  W+P+F+  T RSV+L LPE+V  YL  DG ++  G +       EG   D  +E+ W +++     + P+FP+  A + +AI+SLGG+VFPKLNWS P+DA W+    SLKCK   D+  L KSS FI+ DL   F  CT  S      + LVLRKWC L P   FRCFV+E +L+ V DVY D+R ++WL+D NPF  VTDSLLF W E
Sbjct:    6 VAHCQFSVWYPLFRAVTIRSVILPLPENVKEYLLDDGTLVVSGREDPPTQTPEGS--DDAEEIQWSDDENTATLKAPEFPEFTAKVEEAISSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKALSDIFLLFKSSDFITRDLTQPFIHCTDDSPDPSLNYELVLRKWCELIPGAEFRCFVKENKLIVVFDVYRDSRGKIWLIDFNPFGEVTDSLLFTWDE 221
[Close]
BLAST of Ec-00_001420.1 vs. uniprot
Match: F6R2R8_MONDO (Cell division cycle protein 123 homolog n=5 Tax=Metatheria TaxID=9263 RepID=F6R2R8_MONDO)

HSP 1 Score: 197 bits (501), Expect = 8.970e-57
Identity = 99/217 (45.62%), Postives = 135/217 (62.21%), Query Frame = 1 
Query:  133 VLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQ--MSCGEGVRDDSDDEVDWGNEDEDEQ-DRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSE 771
            VL+CQF  W+P+F++ T +SV+L LP++V  YL  DG ++  G +   +C +   D+  +E+ W +++       P+FP+    + +AI SLGG+VFPKLNWS P+DA W+    SLKCK   D+  L KSS FI+ D    F  CT  S      + LVLRKWC L P   FRCFV+E +L+ V DVY D+  +VWL+D NPF  VTDSLLF W E
Sbjct:    6 VLHCQFSAWYPLFRNLTIKSVILPLPQNVKDYLLDDGTLVVSGREDPPTCSQPDSDNEGEEIQWSDDENTTTLTAPEFPEFAIKVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFVHCTDDSPDPCMEYELVLRKWCELIPGAEFRCFVKENKLIVVFDVYRDSMGKVWLIDFNPFGEVTDSLLFTWEE 222
[Close]
BLAST of Ec-00_001420.1 vs. uniprot
Match: A0A5F9CFC4_RABIT (Cell division cycle protein 123 homolog n=3 Tax=Lagomorpha TaxID=9975 RepID=A0A5F9CFC4_RABIT)

HSP 1 Score: 197 bits (501), Expect = 8.970e-57
Identity = 100/217 (46.08%), Postives = 135/217 (62.21%), Query Frame = 1 
Query:  133 VLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQ--MSCGEGVRDDSDDEVDWGNEDEDEQ-DRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSE 771
            VL+CQF  W+P+F+  T +SV+L LP++V  YL  DG ++  G +   +  +   DD  +E+ W +++       P+FP+ +  + +AI SLGG+VFPKLNWS P+DA W+    SLKCK   D+  L KSS FI+ D    F  CT  S      + LVLRKWC L P   FRCFV+E +L+ V DVY D+R +VWL+D NPF  VTDSLLF W E
Sbjct:    6 VLHCQFSAWYPLFRSLTIKSVILPLPQNVKDYLLDDGTLVVSGREDPPAHSQPDSDDEAEEIQWSDDENTATLTAPEFPEFNTTVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFIHCTDDSPDPCLEYELVLRKWCELIPGAEFRCFVKENKLIVVFDVYRDSRGKVWLIDFNPFGEVTDSLLFTWEE 222
[Close]
BLAST of Ec-00_001420.1 vs. uniprot
Match: X6RA30_HUMAN (Cell division cycle protein 123 homolog n=5 Tax=Homininae TaxID=207598 RepID=X6RA30_HUMAN)

HSP 1 Score: 196 bits (499), Expect = 1.780e-56
Identity = 100/218 (45.87%), Postives = 133/218 (61.01%), Query Frame = 1 
Query:  130 HVLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQ--MSCGEGVRDDSDDEVDWGNEDEDEQ-DRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSE 771
            HVL+CQF  W+P F+  T +SV+L LP++V  YL  DG ++  G     +  +   DD  +E+ W +++       P+FP+    + +AI SLGG+VFPKLNWS P+DA W+    SLKCK   D+  L KSS FI+ D    F  CT  S      + LVLRKWC L P   FRCFV+E +L+ V D+Y D+R +VWL+D NPF  VTDSLLF W E
Sbjct:    5 HVLHCQFSAWYPFFRGVTIKSVILPLPQNVKDYLLDDGTLVVSGRDDPPTHSQPDSDDEAEEIQWSDDENTATLTAPEFPEFATKVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFIHCTDDSPDPCIEYELVLRKWCELIPGAEFRCFVKENKLIVVFDIYRDSRGKVWLIDFNPFGEVTDSLLFTWEE 222
[Close]
BLAST of Ec-00_001420.1 vs. uniprot
Match: L9KR85_TUPCH (Cell division cycle protein 123 homolog n=1 Tax=Tupaia chinensis TaxID=246437 RepID=L9KR85_TUPCH)

HSP 1 Score: 194 bits (494), Expect = 1.600e-55
Identity = 99/218 (45.41%), Postives = 133/218 (61.01%), Query Frame = 1 
Query:  130 HVLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQ--MSCGEGVRDDSDDEVDWGNEDEDEQ-DRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSE 771
            HVL+CQF  W+P+F+  T +SVVL LP++V  YL  DG ++  G     +  +   D+  +E+ W +++       P+FP+    + +AI SLGG+VFPKLNWS P+DA W+    SLKCK   D+  L KSS FI+ D    F  C   S      + LVLRKWC L P   FRCFV+E +L+ V D+Y D+R +VWL+D NPF  VTDSLLF W E
Sbjct:    5 HVLHCQFSSWYPLFRSLTIKSVVLPLPQNVKDYLLDDGTLVVSGRDDPPTHSQPDSDNEAEEIQWSDDENTATLTAPEFPEFTTKVQEAINSLGGSVFPKLNWSAPRDAYWIAMNSSLKCKTLSDIFLLFKSSDFITRDFTQPFIHCADDSPDPCMEYELVLRKWCELIPGAEFRCFVKENKLIVVFDIYRDSRGKVWLIDFNPFGEVTDSLLFTWEE 222
[Close]
BLAST of Ec-00_001420.1 vs. uniprot
Match: A0A8K0A4E5_BRALA (CDC123 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A4E5_BRALA)

HSP 1 Score: 194 bits (493), Expect = 5.870e-55
Identity = 116/293 (39.59%), Postives = 149/293 (50.85%), Query Frame = 1 
Query:  133 VLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLP-----KGFQMSCGEGVRDDSDDE-VDWGNEDEDEQ-DRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVA-----------------------------------------DVYVDNRSRVWLLDMNPFSGVTDSLLFDWSEDSLAAPLPPRPPTLDRGEETLPPGVAMRIHF 864
            V+NC F  W+P F+H T  SVVL LP   + YL  DG+VLP     KG + S      DDSD+E  DW +ED+D Q D P+FP+L A +  AIA LGG VFPKLNWS PKDA+W+    SL+C  P DV  L+KSS F++HDL   FD C          + L+LR+W N+HP M FRCFV+  RL+ ++                                         DVY     +V L+D+NPF  VTD L+F W E +   PL       +    T   GVA  + F
Sbjct:    6 VMNCIFSAWYPRFEHLTFPSVVLPLPAQFISYLLADGIVLPNSGKGKGHKSSYKAHPDDDSDEEDPDWSDEDDDAQTDAPEFPELEAQIIQAIAHLGGKVFPKLNWSAPKDASWIALNNSLQCTCPEDVYLLLKSSDFVTHDLTQPFDRCEDEDTDVDVQYELILRRWTNVHPGMEFRCFVKNDRLIAISQRHHSNFFPYVDEQHDSIHEDILDFYHTDLEKKFPDTNFVFDVYRKKAGKVMLVDINPFCEVTDPLMFTWDELTSGEPL-------EGSNSTQGEGVAEGVVF 291
[Close]
BLAST of Ec-00_001420.1 vs. uniprot
Match: A0A1Y2BXG1_9FUNG (Cell division cycle protein 123 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BXG1_9FUNG)

HSP 1 Score: 192 bits (488), Expect = 3.980e-54
Identity = 111/275 (40.36%), Postives = 150/275 (54.55%), Query Frame = 1 
Query:  112 PAPTQGHVLNCQFGRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLP---KGFQMSCGEGVR-DDSDDEVDWGNEDEDEQDR----PDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAAWVN-GGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACT----GSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVA-----------------------------------------DVYVD-NRSRVWLLDMNPFSGVTDSLLFDWSE 771
            P  T  HV+NC F  W+P F+  T +S ++ +P + + YL +DGV LP    G      E  + DDSDD+    +EDE+  +     P FP+   L++  I SLGG VFPKLNWS PKDA+W+  G +LKCK P D+  L+KSS FI+HDL   F+ACT     S+   PE++ L+LRKW +LHPSM FRCFV++  L+G+                                          D+Y++ N  +VWL+D NPFS  TDSLLF W E
Sbjct:    7 PPLTVDHVMNCSFSSWYPKFRRVTLKSEIIAIPPEFIAYLNEDGVFLPLDSNGMPQPSYETPKVDDSDDDNGDFSEDEEGGESWGSIPHFPEFQELITQRIESLGGEVFPKLNWSSPKDASWMALGQTLKCKTPADIFLLLKSSDFITHDLTCPFEACTETLDASTKQTPESYELILRKWYDLHPSMEFRCFVKDNVLIGICQRDHLNFYPFLVTSRVQLESAIKAFYVDEILGKFGNNSFVFDLYINKNNQKVWLIDFNPFSINTDSLLFTWDE 281
The following BLAST results are available for this feature:
BLAST of Ec-00_001420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE97_ECTSI7.720e-29390.79Cell division cycle 123 homolog (S. cerevisiae) n=... [more]
A0A8D0L088_STROC6.660e-6049.07Cell division cycle protein 123 homolog n=2 Tax=Ne... [more]
A0A2U4B6W9_TURTR5.640e-5845.41Cell division cycle protein 123 homolog n=17 Tax=E... [more]
UPI000739B9FE2.220e-5747.25cell division cycle protein 123 homolog isoform X2... [more]
F6R2R8_MONDO8.970e-5745.62Cell division cycle protein 123 homolog n=5 Tax=Me... [more]
A0A5F9CFC4_RABIT8.970e-5746.08Cell division cycle protein 123 homolog n=3 Tax=La... [more]
X6RA30_HUMAN1.780e-5645.87Cell division cycle protein 123 homolog n=5 Tax=Ho... [more]
L9KR85_TUPCH1.600e-5545.41Cell division cycle protein 123 homolog n=1 Tax=Tu... [more]
A0A8K0A4E5_BRALA5.870e-5539.59CDC123 protein n=1 Tax=Branchiostoma lanceolatum T... [more]
A0A1Y2BXG1_9FUNG3.980e-5440.36Cell division cycle protein 123 n=1 Tax=Rhizoclosm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1663241..1667167 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score808.9
Seed ortholog evalue1.1e-231
Seed eggNOG ortholog2880.D8LE97
Preferred nameCDC123
Length1215
KEGG rclassRC00004,RC00037,RC02816
KEGG koko:K08765
KEGG ReactionR01923
KEGG Pathwayko00071,ko01212,ko03320,ko04152,ko04714,ko04920,ko04922,ko04931,map00071,map01212,map03320,map04152,map04714,map04920,map04922,map04931
Hectar predicted targeting categoryother localisation
Gene idEc-00_001420.1
GOsGO:0000166,GO:0000287,GO:0001732,GO:0002181,GO:0002183,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0007049,GO:0007050,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016043,GO:0017076,GO:0019222,GO:0019538,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032553,GO:0032555,GO:0032559,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042127,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0045727,GO:0045786,GO:0045948,GO:0046872,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051726,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905143,GO:2000112
EggNOG free text desc.eukaryotic translation initiation factor 2 complex assembly
EggNOG OGsKOG2983@1,KOG2983@2759
EC2.3.1.21
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001420Ec-00_001420Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1662420..1669582 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001420.1Ec-00_001420.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1663241..1667167 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001420.1.1Ec-00_001420.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1663241..1663588 +
Ec-00_001420.1.2Ec-00_001420.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1664010..1664102 +
Ec-00_001420.1.3Ec-00_001420.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1664404..1664507 +
Ec-00_001420.1.4Ec-00_001420.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1665379..1665503 +
Ec-00_001420.1.5Ec-00_001420.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1666623..1667167 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001420.1CDS:Ec-00_001420.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1663241..1663588 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001420.1 ID=Ec-00_001420.1|Name=Ec-00_001420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=405bp
MVPNVGAGDTSEDAVQELNNTEAAAAAAETPEPSGVSPAPTQGHVLNCQF
GRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQMSCGEGVRDDS
DDEVDWGNEDEDEQDRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAA
WVNGGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLV
LRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDS
LLFDWSEDSLAAPLPPRPPTLDRGEETLPPGVAMRIHFDPSSTHGDQASS
TPSGTVAARSNDPSDSQQGPPGGRTRATGVLERATGITLAGGGEGRDFEF
RCVPSSLHMVPDPMGRYRGPADVGMGTLACGTGGNGGLELEDLIESCRLA
EKDD*
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spliced messenger RNA

>Ec-00_001420.1 ID=Ec-00_001420.1|Name=Ec-00_001420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1215bp|location=Sequence derived from alignment at chr_00:1663241..1667167+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGCCTAACGTCGGAGCGGGCGACACGAGCGAAGACGCCGTGCAGGA
ACTCAACAACACCGAGGCAGCAGCAGCAGCAGCGGAAACGCCCGAACCGT
CGGGGGTGTCACCGGCGCCTACGCAGGGGCATGTCCTGAACTGCCAGTTC
GGTCGATGGCATCCGGTGTTCAAGCACTGCACACCGCGTAGCGTGGTACT
GAAGCTCCCCGAAGATGTGGTGCGGTACCTCCAGCAGGATGGCGTGGTGC
TGCCGAAGGGCTTCCAGATGTCGTGCGGGGAAGGGGTGCGGGATGACAGC
GACGACGAGGTGGACTGGGGAAACGAAGACGAGGATGAACAAGATAGGCC
AGACTTCCCGGACCTTCACGCGCTGCTGAGCGACGCGATTGCTTCTTTGG
GGGGAGCGGTGTTTCCCAAACTCAACTGGAGCTGCCCGAAGGACGCGGCG
TGGGTAAACGGAGGGAGCCTAAAGTGCAAGCTGCCAGGGGACGTGCTCTG
CCTGATCAAGAGCTCCACCTTCATCTCGCATGATCTCAACCATGCGTTTG
ACGCGTGCACGGGCTCGAGCATATCTCGACCGGAAACATTTACGCTGGTC
TTGCGGAAGTGGTGCAACCTCCACCCCTCCATGCTCTTCCGGTGTTTCGT
CAGAGAGAGGCGGCTTGTGGGCGTGGCGGACGTGTACGTGGACAACCGCT
CTCGAGTGTGGCTCCTGGACATGAACCCCTTCTCGGGGGTGACGGACTCG
CTCCTGTTCGACTGGTCCGAGGATTCTCTGGCCGCCCCTCTCCCCCCACG
CCCGCCGACGCTTGACCGAGGAGAGGAAACCCTCCCGCCGGGGGTTGCCA
TGCGGATACACTTCGACCCCTCGTCTACACACGGAGACCAGGCGAGTTCC
ACGCCTTCTGGAACCGTTGCAGCGCGAAGCAATGACCCGAGTGACTCGCA
GCAAGGGCCGCCTGGGGGGCGGACAAGGGCAACAGGCGTTCTCGAGAGAG
CGACGGGGATTACGCTGGCCGGGGGGGGGGAGGGGAGGGACTTCGAGTTT
CGGTGCGTGCCGTCCAGCTTGCACATGGTGCCGGACCCGATGGGGCGATA
TAGGGGCCCCGCGGATGTGGGGATGGGGACCCTTGCGTGCGGCACCGGGG
GCAACGGGGGTCTCGAGCTCGAGGACTTGATCGAGTCGTGCCGCCTTGCG
GAAAAGGATGATTGA
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protein sequence of Ec-00_001420.1

>Ec-00_001420.1 ID=Ec-00_001420.1|Name=Ec-00_001420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=405bp
MVPNVGAGDTSEDAVQELNNTEAAAAAAETPEPSGVSPAPTQGHVLNCQF
GRWHPVFKHCTPRSVVLKLPEDVVRYLQQDGVVLPKGFQMSCGEGVRDDS
DDEVDWGNEDEDEQDRPDFPDLHALLSDAIASLGGAVFPKLNWSCPKDAA
WVNGGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLV
LRKWCNLHPSMLFRCFVRERRLVGVADVYVDNRSRVWLLDMNPFSGVTDS
LLFDWSEDSLAAPLPPRPPTLDRGEETLPPGVAMRIHFDPSSTHGDQASS
TPSGTVAARSNDPSDSQQGPPGGRTRATGVLERATGITLAGGGEGRDFEF
RCVPSSLHMVPDPMGRYRGPADVGMGTLACGTGGNGGLELEDLIESCRLA
EKDD*
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mRNA from alignment at chr_00:1663241..1667167+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001420.1 ID=Ec-00_001420.1|Name=Ec-00_001420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3927bp|location=Sequence derived from alignment at chr_00:1663241..1667167+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTGCCTAACGTCGGAGCGGGCGACACGAGCGAAGACGCCGTGCAGGA
ACTCAACAACACCGAGGCAGCAGCAGCAGCAGCGGAAACGCCCGAACCGT
CGGGGGTGTCACCGGCGCCTACGCAGGGGCATGTCCTGAACTGCCAGTTC
GGTCGATGGCATCCGGTGTTCAAGCACTGCACACCGCGTAGCGTGGTACT
GAAGCTCCCCGAAGATGTGGTGCGGTACCTCCAGCAGGATGGCGTGGTGC
TGCCGAAGGGCTTCCAGATGTCGTGCGGGGAAGGGGTGCGGGATGACAGC
GACGACGAGGTGGACTGGGGAAACGAAGACGAGGATGAACAAGATAGGGT
AAGAGAGAGAGAGCTCTTGGGACGTGGTTTCTCGGAACATGGTGTTGATC
GGGCGTTTGGAATATCGTATCTGCACGCAACTACGGTAGAAAGGGCGCGC
TTTTAACCGAACGCGCTGACCAGTCGTATTTTTGTGTGGTGCATGGGGGC
ATGTACATGATACGCGAACCCAGGTTTGATTTCCTACTACAAGGGTACGA
GGCGGCCAGGTGAAGGGGTAATGACGGTGGAGAAGGCATGTACTACATAT
GCTTTCTGAAAATTCGCATCGTCAGCCGGTGATACTCTCTAAAGATGTTC
CCAAACCACGGACGTGTCCTGTTTTTCCTGATCCGTCCACAACTCAATGC
TCCCTGACCGACCGAAACCAACTGGTGGTGCTGTTGCTGCTGCTCCGTCC
ATATCTCAACGACAACCAGCCAGACTTCCCGGACCTTCACGCGCTGCTGA
GCGACGCGATTGCTTCTTTGGGGGGAGCGGTGTTTCCCAAACTCAACTGG
AGCTGCCCGAAGGCAAGTCTTACGATTTTGCTGGTACCAGCATCTATCGC
TGTTCATTTGCCTGTGACTGTCGGTGTGGCCGTCTGTGTGTCTGCTTGTC
TCGGTTCGCTCGCTTACTGTTGTCGCTTCCTCGTAGACCACCCTAATGAG
CTGCGCACCAGCATGCGACGAGGATATAGCTTTCATGAGAGACAATCTCA
AGTTAGCGTCTGGTTCGCGCATCTTGCGAAATAGCACGGTTTTGGTGTGT
CACTGTCACTGTGTGTTGTGTGTTTGACGGCGTCGGTACTTGCTCTTCCA
CCGGTACACTTAGGACGCGGCGTGGGTAAACGGAGGGAGCCTAAAGTGCA
AGCTGCCAGGGGACGTGCTCTGCCTGATCAAGAGCTCCACCTTCATCTCG
CATGATCTCAACCATGCGTGAGTATGCGTCTTGTCACCCTTCCATGTGGA
GACCTACACCACCAACACACCAGCACCAGCACCACCTTTTTTGAGCAGAC
TGATTGGCCGAGGAGCCACCTACGTGGTGGTGACCGCACACCAGGGGAGT
ATCTGGTGTAGATTTGCTGAGCAATCGTGCGCCGCTGTCGTGGAGCCGTA
CATAAGAGTATTGATAGATCGGATGGGAGGACTTGGTTGGACCACCGGTC
ACAACGTGCCAGCCGCAGATGGCACCTGAGGTAGCTTTCTACGGTGGGGT
GACCTACGATTTTGGTCGCTCGATGCTGGAAACCCCCGCAGTGCATACAG
CATATAGCACTACAAGTAACACGATCCTAGTCAAGGCTTGACTTACCTCG
GCGCCCAATTTGGGTTTTGCCGCATTGCAGGGTTAGCGTTAGGGCTGCTA
AGTTTTCTTCGCGGCGTTGAGTGTGCGGGGGACTTTGTCTTTGGTCACGA
CTGACGGTACATGTAGATAATTTACATGTTATCTATTCATCCGTGGACAC
TCACGTTCCAAGGCGGTGCTTTCTTTTGAGGTGTTCCCTTGGCCTGTTCG
AGCGTTTCTCTCTCTCTGTTGTCCTCTTCGTCGTCGTTGTCGTTGTCTTC
ACGCAAAAACTATTCTGGTAACACCCGTATTGGTCCAATTGACGTGGGGG
CCTCCCGTGACAATGTACTCGACTTTGAAGATGCCGACATGCTCCGGTTT
ACGGTAGTTTAGAGTTTCTTGCTGAAAATATTGGTAGGTGGGGTCACCTC
GTGTGAAAGTTTCCAAGATATCTCCGCCCCCACGACATCAACTGTGAACG
TACCGGACTCGTGGCTTGCGCCGTTCCATGTGCTGAAGGTTTGACGCGTG
CACGGGCTCGAGCATATCTCGACCGGAAACATTTACGCTGGTCTTGCGGA
AGTGGTGCAACCTCCACCCCTCCATGCTCTTCCGGTGTTTCGTCAGAGAG
AGGCGGCTTGTGGGTGAGTCTATCATATCATGTCGTGTACGAGGGAATAT
GGAGTTGTTCCTCATCACTTTCGTTGTGTGTGTTCTGCTATTTTACCCTC
TTTTCGTCTCCTTTGTCGGTTTGGTGGGCGTCGAGGCCGTAAATAGTGAG
CGTTGAACCCGCTCCAAATCTCTCTAATCTTTGTTGGAATGAGGCAATGT
CCCTCGATGTCGTTGAGCCTCTAAGATTGAACACACAAGCTTACGCCAAC
ATTCACTAGCCCCGGGAAATACTGGCTGCTGTTGTCCACACTGTTGTCGG
AATGGATCTCGGGAACACAGCCACGACGGACAACGTATTTCTCTTTGCTG
GACGTCGTCCATATCTGACACCTTTGGCCCATAGGTGTTTGCCAAAGAGA
CTGCACGAGCTACTACGGGTTTCTAGAGGAAGAGGCGGACCGGCTGTCGA
CGTTGCTGGAGGAATTTTTCGCGGCGGAAGTGTGCAAGAAGTTCGCAGAC
CCTGACTGTAAGGATGTCATGGCGTTAGCTTGAACCTCATACTAAATAGT
GCATTTGTGACTGCCCAACAAGCCGAAGAGTTTCTTGTACAAGAAAAGCC
CTCTGTGGGCCTCCTCCTCTGTATCCCGTCCTATCACATACCGAAATGCG
CAATAAATCAACGCTCAGAAAGAATGAGATGGCACACACGTTTGAAGGAT
CGCTCATGTTGTTGGCGCCGTCTGGAGAGTTCTACAAAGCGGGACGGAGC
GCTGAGGAAAATGAAGTTGTCCAGTTTGTATCGAGCACAAACCACGAGGG
TTGGCCACACATTTTTCCCGAAGAGTTTCGGTTCACCAGACGCACCTTGC
GTAGTAGGTCCCGCGTAGGGCATCGTCGCATGCATGAAAATATACACAAG
AGTCGATTTTGTCATTCCCCTAGCGGCACCCCCTCTTGCCCCCCCGGCCA
GCTTTCTCTTTTCCACTCGCCACTTGCAAGATAAGAACAGAACAGGGGAA
CAGGGGCACTACCGACCGCTGGAGGCTTGCTGGCCTTTCCCGAGTGGTGT
CGGCGATGACTTTTTTTAAAATATGTTTTCTACCCTCCGATGCCGATCCC
ATCACACGACCGACGTGTACACGTGTGCCCAGGCGTGGCGGACGTGTACG
TGGACAACCGCTCTCGAGTGTGGCTCCTGGACATGAACCCCTTCTCGGGG
GTGACGGACTCGCTCCTGTTCGACTGGTCCGAGGATTCTCTGGCCGCCCC
TCTCCCCCCACGCCCGCCGACGCTTGACCGAGGAGAGGAAACCCTCCCGC
CGGGGGTTGCCATGCGGATACACTTCGACCCCTCGTCTACACACGGAGAC
CAGGCGAGTTCCACGCCTTCTGGAACCGTTGCAGCGCGAAGCAATGACCC
GAGTGACTCGCAGCAAGGGCCGCCTGGGGGGCGGACAAGGGCAACAGGCG
TTCTCGAGAGAGCGACGGGGATTACGCTGGCCGGGGGGGGGGAGGGGAGG
GACTTCGAGTTTCGGTGCGTGCCGTCCAGCTTGCACATGGTGCCGGACCC
GATGGGGCGATATAGGGGCCCCGCGGATGTGGGGATGGGGACCCTTGCGT
GCGGCACCGGGGGCAACGGGGGTCTCGAGCTCGAGGACTTGATCGAGTCG
TGCCGCCTTGCGGAAAAGGATGATTGA
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Coding sequence (CDS) from alignment at chr_00:1663241..1667167+

>Ec-00_001420.1 ID=Ec-00_001420.1|Name=Ec-00_001420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1215bp|location=Sequence derived from alignment at chr_00:1663241..1667167+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTGCCTAACGTCGGAGCGGGCGACACGAGCGAAGACGCCGTGCAGGA
ACTCAACAACACCGAGGCAGCAGCAGCAGCAGCGGAAACGCCCGAACCGT
CGGGGGTGTCACCGGCGCCTACGCAGGGGCATGTCCTGAACTGCCAGTTC
GGTCGATGGCATCCGGTGTTCAAGCACTGCACACCGCGTAGCGTGGTACT
GAAGCTCCCCGAAGATGTGGTGCGGTACCTCCAGCAGGATGGCGTGGTGC
TGCCGAAGGGCTTCCAGATGTCGTGCGGGGAAGGGGTGCGGGATGACAGC
GACGACGAGGTGGACTGGGGAAACGAAGACGAGGATGAACAAGATAGGCC
AGACTTCCCGGACCTTCACGCGCTGCTGAGCGACGCGATTGCTTCTTTGG
GGGGAGCGGTGTTTCCCAAACTCAACTGGAGCTGCCCGAAGGACGCGGCG
TGGGTAAACGGAGGGAGCCTAAAGTGCAAGCTGCCAGGGGACGTGCTCTG
CCTGATCAAGAGCTCCACCTTCATCTCGCATGATCTCAACCATGCGTTTG
ACGCGTGCACGGGCTCGAGCATATCTCGACCGGAAACATTTACGCTGGTC
TTGCGGAAGTGGTGCAACCTCCACCCCTCCATGCTCTTCCGGTGTTTCGT
CAGAGAGAGGCGGCTTGTGGGCGTGGCGGACGTGTACGTGGACAACCGCT
CTCGAGTGTGGCTCCTGGACATGAACCCCTTCTCGGGGGTGACGGACTCG
CTCCTGTTCGACTGGTCCGAGGATTCTCTGGCCGCCCCTCTCCCCCCACG
CCCGCCGACGCTTGACCGAGGAGAGGAAACCCTCCCGCCGGGGGTTGCCA
TGCGGATACACTTCGACCCCTCGTCTACACACGGAGACCAGGCGAGTTCC
ACGCCTTCTGGAACCGTTGCAGCGCGAAGCAATGACCCGAGTGACTCGCA
GCAAGGGCCGCCTGGGGGGCGGACAAGGGCAACAGGCGTTCTCGAGAGAG
CGACGGGGATTACGCTGGCCGGGGGGGGGGAGGGGAGGGACTTCGAGTTT
CGGTGCGTGCCGTCCAGCTTGCACATGGTGCCGGACCCGATGGGGCGATA
TAGGGGCCCCGCGGATGTGGGGATGGGGACCCTTGCGTGCGGCACCGGGG
GCAACGGGGGTCTCGAGCTCGAGGACTTGATCGAGTCGTGCCGCCTTGCG
GAAAAGGATGATTGA
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Synonyms
The feature 'Ec-00_001420.1' has the following synonyms
Synonym
Esi0013_0099
Esi_0013_0099