Ec-00_001350.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001350.1
Unique NameEc-00_001350.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length461
Homology
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BLAST of Ec-00_001350.1 vs. uniprot
Match: D8LE90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE90_ECTSI)

HSP 1 Score: 930 bits (2404), Expect = 0.000e+0
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 3 
Query:   66 MEGGGIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSDRIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAPIGDEHDPAVGSWHVSGAEKMDGVSSGPQDLWDGRSNAGYPRAGEATRHPSDGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRRGPNQEALQDPDFVTCLETAPARRRASPTPGKRGRKRGPPSSSDSPTGHGASRLRYRRTLEYQQQAASNYGATADSGDAHGGGDPQRQQNNVTMRRDWPCSSSSAPGANQDGDAMAYMRDGGWEDGRRDPCGTSRVRVGVVEQEWSRPAHSTSGHGGMSRDGSMFPSEWNGRGRRSSTASAPPNSSAPGGTGVVGATSGPSSSSRWSKFVR 1445
            MEGGGIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSDRIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAPIGDEHDPAVGSWHVSGAEKMDGVSSGPQDLWDGRSNAGYPRAGEATRHPSDGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRRGPNQEALQDPDFVTCLETAPARRRASPTPGKRGRKRGPPSSSDSPTGHGASRLRYRRTLEYQQQAASNYGATADSGDAHGGGDPQRQQNNVTMRRDWPCSSSSAPGANQDGDAMAYMRDGGWEDGRRDPCGTSRVRVGVVEQEWSRPAHSTSGHGGMSRDGSMFPSEWNGRGRRSSTASAPPNSSAPGGTGVVGATSGPSSSSRWSKFVR
Sbjct:    1 MEGGGIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSDRIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAPIGDEHDPAVGSWHVSGAEKMDGVSSGPQDLWDGRSNAGYPRAGEATRHPSDGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRRGPNQEALQDPDFVTCLETAPARRRASPTPGKRGRKRGPPSSSDSPTGHGASRLRYRRTLEYQQQAASNYGATADSGDAHGGGDPQRQQNNVTMRRDWPCSSSSAPGANQDGDAMAYMRDGGWEDGRRDPCGTSRVRVGVVEQEWSRPAHSTSGHGGMSRDGSMFPSEWNGRGRRSSTASAPPNSSAPGGTGVVGATSGPSSSSRWSKFVR 460
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BLAST of Ec-00_001350.1 vs. uniprot
Match: A0A6H5KK09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK09_9PHAE)

HSP 1 Score: 666 bits (1718), Expect = 8.820e-238
Identity = 345/422 (81.75%), Postives = 365/422 (86.49%), Query Frame = 3 
Query:  180 QSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSDRIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAPIGDEHDPAVGSWHVSGAEKMDGVSSGPQDLWDGRSNAGYPRAGEATRHPSDGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRRGPNQEALQDPDFVTCLETAPARRRASPTPGKRGRKRGPPSSSDSPTGHGASRLRYRRTLEYQQQAASNYGATADSGDAHGGGDPQRQQNNVTMRRDWPCSSSSAPGANQDGDAMAYMRDGGWEDGRRDPCGTSRVRVGVVEQEWSRPAHSTSGHGGMSRDGSMFPSEWNGRGRRSSTASAPPNSSAPGGTGVVGATSGPSSSSRWSKFVR 1445
            QSIVKVWGRGGHAKDVRGLVMALNAAAGGGED NNV+ NNVGG  PQSQS+ H QDG+N S RIGN D DRAYS  DRA+LQHT+G AQPGLY RN SWARP+GFVPA VAPIGDEHDPAVGSWH  G EKMDGVSSG QDLWDG SNAGYPRA EAT HPSDGFGTSREHHP+VRA+WQP AEPAG GGR+GSRWGAFASNRATEVL+GR GPNQEALQDP+FVTCLETAPA+RRASPTPGKR RK GPPSSSDSP   GASR RYRRTLEYQQQAASN GA AD+GDA G G PQ QQ+ VTMRR W CSSSSA GA+  G  M Y RDGGWEDGRRDPCGT+R RVG V+QEWSRPAHS SG+GGMSR+GS+  SE NGRGRRSSTAS PPNSSAPGGTGVVGAT GPSSSSRWSKF R
Sbjct:    4 QSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDPNNVVCNNVGGSEPQSQSQPHTQDGQNPSGRIGNHDDDRAYSVGDRASLQHTLGQAQPGLYVRNGSWARPEGFVPASVAPIGDEHDPAVGSWHSWGTEKMDGVSSGTQDLWDGDSNAGYPRAREATSHPSDGFGTSREHHPNVRATWQPVAEPAGAGGRNGSRWGAFASNRATEVLDGRLGPNQEALQDPNFVTCLETAPAKRRASPTPGKRRRKCGPPSSSDSPLEDGASRSRYRRTLEYQQQAASNNGAAADAGDARGRGGPQWQQDGVTMRRAWSCSSSSASGASLYGGPMTYTRDGGWEDGRRDPCGTNRGRVGAVDQEWSRPAHSASGYGGMSREGSVLTSELNGRGRRSSTASTPPNSSAPGGTGVVGATRGPSSSSRWSKFAR 425
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BLAST of Ec-00_001350.1 vs. uniprot
Match: A0A3B3T2R6_9TELE (Uncharacterized protein n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T2R6_9TELE)

HSP 1 Score: 69.3 bits (168), Expect = 4.240e-11
Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 3 
Query:   78 GIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            G  F  LRCFSCQ FQV+Q  KS KW C+MCGE QS++KV+G+G  A D R  V  LNA  G
Sbjct:    4 GQEFNVLRCFSCQTFQVHQVKKSKKWNCKMCGEKQSLLKVYGQGSGA-DCRRHVQKLNALRG 64
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BLAST of Ec-00_001350.1 vs. uniprot
Match: UPI0015B2AA0F (MRN complex-interacting protein isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B2AA0F)

HSP 1 Score: 69.7 bits (169), Expect = 6.690e-10
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 3 
Query:   87 FLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            F  LRCFSCQ FQV+Q  KS KW C+MCGE QS+VKV+GRG  A D R  V  LN+  G
Sbjct:    5 FHVLRCFSCQTFQVHQVKKSKKWSCKMCGEKQSLVKVYGRGSGA-DCRRHVQKLNSLRG 62
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BLAST of Ec-00_001350.1 vs. uniprot
Match: UPI001BB2BCC7 (MRN complex-interacting protein-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2BCC7)

HSP 1 Score: 65.9 bits (159), Expect = 7.820e-10
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 3 
Query:   87 FLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            F  +RCF+C  FQV+Q  K  KW+C+MCGE QS+ KV+G+G   KD R LV +LN  AG
Sbjct:    5 FHVIRCFACLVFQVHQVKKKPKWQCKMCGEKQSVRKVYGKGA-GKDCRLLVQSLNMTAG 62
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BLAST of Ec-00_001350.1 vs. uniprot
Match: A0A8C9R4G2_SCLFO (MRN complex interacting protein n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9R4G2_SCLFO)

HSP 1 Score: 69.7 bits (169), Expect = 2.520e-9
Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 3 
Query:   78 GIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            G  F  LRCFSCQ FQV Q  KS KW C+MCGE QS++KV+G+G  A D R  V  LNA  G
Sbjct:    2 GQEFHVLRCFSCQTFQVQQVKKSKKWSCKMCGEKQSLIKVYGQGSGA-DCRRHVQKLNALRG 62
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BLAST of Ec-00_001350.1 vs. uniprot
Match: UPI000CD61316 (MRN complex-interacting protein isoform X1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD61316)

HSP 1 Score: 69.3 bits (168), Expect = 3.250e-9
Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 3 
Query:   78 GIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            G  F  LRCFSCQ FQV+Q  KS KW C+MCGE QS++KV+G+G  A D R  V  LNA  G
Sbjct:    2 GQEFNVLRCFSCQTFQVHQVKKSKKWNCKMCGEKQSLLKVYGQGSGA-DCRRHVQKLNALRG 62
[Close]
BLAST of Ec-00_001350.1 vs. uniprot
Match: A0A667Z022_9TELE (Uncharacterized protein n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Z022_9TELE)

HSP 1 Score: 65.1 bits (157), Expect = 4.210e-9
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 3 
Query:   87 FLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            F  LRCFSCQ FQV Q  KS +W+C++CGE Q+++K +GRG  A D R  V  LNA  G
Sbjct:   56 FQVLRCFSCQTFQVQQVKKSSRWRCKLCGEKQTLLKEFGRGSGA-DCRRHVQKLNAMRG 113
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BLAST of Ec-00_001350.1 vs. uniprot
Match: UPI000D72EB99 (uncharacterized protein LOC112561384 isoform X1 n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72EB99)

HSP 1 Score: 68.6 bits (166), Expect = 7.360e-9
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 3 
Query:   81 IVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            + F  L+C+SCQ +QV+Q  KS KWKC++CGE QS++KV+GRG   KD R  V  LN   G
Sbjct:    2 LNFHVLQCYSCQTYQVHQEAKSKKWKCKLCGEQQSVIKVFGRGS-GKDCRQHVQKLNMLRG 61
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BLAST of Ec-00_001350.1 vs. uniprot
Match: UPI001EE5DDD3 (MRN complex-interacting protein-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5DDD3)

HSP 1 Score: 63.9 bits (154), Expect = 1.250e-8
Identity = 33/62 (53.23%), Postives = 38/62 (61.29%), Query Frame = 3 
Query:   78 GIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAG 263
            G VF  ++C+SC  FQV QR K  KW C+MCGE QSI KV+G G  A D R  V  LN   G
Sbjct:    3 GQVFQVVQCYSCHTFQVQQRKKVNKWVCKMCGEKQSIKKVYGEGSGA-DCRVHVQKLNTLRG 63
The following BLAST results are available for this feature:
BLAST of Ec-00_001350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE90_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK09_9PHAE8.820e-23881.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3B3T2R6_9TELE4.240e-1158.06Uncharacterized protein n=1 Tax=Paramormyrops king... [more]
UPI0015B2AA0F6.690e-1061.02MRN complex-interacting protein isoform X1 n=2 Tax... [more]
UPI001BB2BCC77.820e-1054.24MRN complex-interacting protein-like n=1 Tax=Lytec... [more]
A0A8C9R4G2_SCLFO2.520e-958.06MRN complex interacting protein n=2 Tax=Scleropage... [more]
UPI000CD613163.250e-958.06MRN complex-interacting protein isoform X1 n=2 Tax... [more]
A0A667Z022_9TELE4.210e-954.24Uncharacterized protein n=1 Tax=Myripristis murdja... [more]
UPI000D72EB997.360e-952.46uncharacterized protein LOC112561384 isoform X1 n=... [more]
UPI001EE5DDD31.250e-853.23MRN complex-interacting protein-like n=1 Tax=Halio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1588526..1591344 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score63.9
Seed ortholog evalue2.2e-07
Seed eggNOG ortholog7918.ENSLOCP00000014087
Preferred nameC5orf45
Length1449
Hectar predicted targeting categoryother localisation
Gene idEc-00_001350.1
GOsGO:0000018,GO:0000075,GO:0000077,GO:0000278,GO:0001932,GO:0001934,GO:0003674,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006282,GO:0006950,GO:0006974,GO:0007049,GO:0007093,GO:0007095,GO:0007346,GO:0008104,GO:0008150,GO:0009314,GO:0009628,GO:0009893,GO:0009987,GO:0010212,GO:0010389,GO:0010562,GO:0010564,GO:0010569,GO:0010604,GO:0010948,GO:0010972,GO:0019219,GO:0019220,GO:0019222,GO:0022402,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031570,GO:0031572,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0033036,GO:0033365,GO:0033554,GO:0033674,GO:0034502,GO:0034613,GO:0042325,GO:0042327,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043549,GO:0044093,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044818,GO:0045739,GO:0045786,GO:0045859,GO:0045860,GO:0045911,GO:0045930,GO:0045935,GO:0045937,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051641,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0071168,GO:0080090,GO:0080134,GO:0080135,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903047,GO:1905168,GO:2000779,GO:2000781,GO:2001020,GO:2001022,GO:2001032
EggNOG free text desc.UPF0544 protein C5orf45 homolog
EggNOG OGs2CI02@1,2S8YD@2759,3A8CJ@33154,3BTXT@33208,3CXDV@33213,48BBC@7711,493XQ@7742,4A4JZ@7898
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001350Ec-00_001350Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1588526..1591379 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001350.1Ec-00_001350.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1588592..1591344 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001350.1.1Ec-00_001350.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1588526..1588642 +
Ec-00_001350.1.2Ec-00_001350.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1589017..1589067 +
Ec-00_001350.1.3Ec-00_001350.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1589612..1590274 +
Ec-00_001350.1.4Ec-00_001350.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1590727..1591344 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0013505UTR:Ec-00_001350.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1588526..1588591 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001350.1CDS:Ec-00_001350.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1588592..1588642 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001350.1 ID=Ec-00_001350.1|Name=Ec-00_001350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=461bp
MEGGGIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGH
AKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSD
RIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAP
IGDEHDPAVGSWHVSGAEKMDGVSSGPQDLWDGRSNAGYPRAGEATRHPS
DGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRR
GPNQEALQDPDFVTCLETAPARRRASPTPGKRGRKRGPPSSSDSPTGHGA
SRLRYRRTLEYQQQAASNYGATADSGDAHGGGDPQRQQNNVTMRRDWPCS
SSSAPGANQDGDAMAYMRDGGWEDGRRDPCGTSRVRVGVVEQEWSRPAHS
TSGHGGMSRDGSMFPSEWNGRGRRSSTASAPPNSSAPGGTGVVGATSGPS
SSSRWSKFVR*
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spliced messenger RNA

>Ec-00_001350.1 ID=Ec-00_001350.1|Name=Ec-00_001350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1449bp|location=Sequence derived from alignment at chr_00:1588526..1591344+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GCTATACTCTGCTATGCACAACACGAGCGCAGGAGCCGCCGACGAATAGA
GCCATCCTACCTGAAGATGGAGGGAGGAGGAATAGTATTCCTGGCCCTGC
GGTGCTTCTCTTGTCAGTGTTTTCAAGTCAACCAAAGGACCAAGTCGGGC
AAGTGGAAGTGCCGAATGTGCGGTGAGGGTCAGAGCATCGTCAAGGTGTG
GGGTAGAGGGGGTCACGCGAAGGATGTCCGCGGTCTGGTTATGGCGCTCA
ACGCCGCCGCCGGGGGAGGGGAAGACCTCAACAACGTCTTGCGCAACAAC
GTTGGAGGATTCGGGCCGCAATCACAATCACGGCGGCACAAGCAGGACGG
CCGAAACTCCAGCGACAGAATCGGGAACCAGGACGGCGACCGTGCGTATT
CGACGGTTGACCGTGCCGCCCTCCAGCACACCGTGGGACCGGCACAACCT
GGGTTGTACGGGCGAAATAGCAGCTGGGCTCGACCTGACGGGTTTGTTCC
CGCATGTGTGGCGCCCATCGGTGACGAGCATGACCCCGCAGTCGGCTCGT
GGCATGTCTCGGGGGCCGAGAAGATGGATGGCGTGAGCTCGGGGCCGCAG
GACTTGTGGGATGGGCGTTCGAATGCAGGGTACCCCCGGGCAGGGGAGGC
GACGAGGCACCCGAGCGACGGTTTCGGGACAAGTCGCGAGCACCACCCCG
ATGTGCGTGCGTCGTGGCAGCCGGGCGCTGAACCAGCGGGAGGTGGGGGG
AGAAGTGGTAGCCGATGGGGAGCGTTTGCGTCCAACCGCGCAACGGAGGT
CTTGGAGGGGCGCCGAGGGCCCAACCAGGAGGCGTTACAAGACCCGGATT
TCGTCACGTGCCTCGAAACAGCTCCGGCCAGGCGGCGCGCCAGCCCGACG
CCTGGGAAGAGAGGGAGGAAACGCGGCCCACCGAGCAGCTCAGACTCGCC
AACGGGGCACGGGGCGTCAAGGTTGAGGTATCGCAGGACCCTGGAATACC
AGCAGCAGGCGGCATCGAACTACGGCGCTACGGCGGACTCTGGCGATGCA
CACGGAGGGGGTGATCCTCAGCGGCAGCAGAATAATGTGACAATGCGCCG
CGACTGGCCCTGCTCATCCTCAAGCGCGCCAGGCGCGAATCAGGACGGGG
ACGCGATGGCGTACATGCGGGACGGTGGATGGGAAGACGGGAGGCGGGAT
CCGTGCGGGACGAGCCGTGTTCGTGTTGGTGTCGTTGAGCAAGAGTGGTC
TCGCCCCGCCCACAGCACTAGTGGTCACGGTGGCATGTCGAGGGACGGGA
GTATGTTCCCGTCAGAGTGGAACGGTAGGGGCAGAAGAAGTAGCACTGCT
TCGGCACCGCCGAACAGCAGTGCACCCGGTGGCACCGGTGTCGTGGGAGC
AACAAGCGGTCCCTCTTCATCGTCAAGGTGGAGCAAGTTTGTGCGATGA
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protein sequence of Ec-00_001350.1

>Ec-00_001350.1 ID=Ec-00_001350.1|Name=Ec-00_001350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=461bp
MEGGGIVFLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGH
AKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSD
RIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAP
IGDEHDPAVGSWHVSGAEKMDGVSSGPQDLWDGRSNAGYPRAGEATRHPS
DGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRR
GPNQEALQDPDFVTCLETAPARRRASPTPGKRGRKRGPPSSSDSPTGHGA
SRLRYRRTLEYQQQAASNYGATADSGDAHGGGDPQRQQNNVTMRRDWPCS
SSSAPGANQDGDAMAYMRDGGWEDGRRDPCGTSRVRVGVVEQEWSRPAHS
TSGHGGMSRDGSMFPSEWNGRGRRSSTASAPPNSSAPGGTGVVGATSGPS
SSSRWSKFVR*
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mRNA from alignment at chr_00:1588526..1591344+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001350.1 ID=Ec-00_001350.1|Name=Ec-00_001350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2819bp|location=Sequence derived from alignment at chr_00:1588526..1591344+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GCTATACTCTGCTATGCACAACACGAGCGCAGGAGCCGCCGACGAATAGA
GCCATCCTACCTGAAGATGGAGGGAGGAGGAATAGTATTCCTGGCCCTGC
GGTGCTTCTCTTGTCAGGTGTGTCCCTGGACCGCTTTCTTTGGCATGGTG
ATGGGGCTTGACGTAAGGTTTACCCTCTCTCTTCGCCCAGCTTTCTCTTA
CGATCCCTTATCTCTATCGTACGGATGTAGGGCAATAGGCTGGCCGATTG
TCGTTCAAGTCGTCCTTCCTATGCATATGATATAGATATGAGCTGGCAAA
GTTGCGTTCTACGTAGAACAGGACGAACAGGGCACGAAGCGAGACATTTT
TTTTTGCCAGTCAACCGACAGGATTTTCCACACGGCAGCCGGTTGACACT
TTTCAAAATTCAAACTGGCTACACTTCTACACTATATACACACTTGCAAA
TACCTCGATCTCTTCCTTCTCCACCTTCCTTCGCTCCGCAGTGTTTTCAA
GTCAACCAAAGGACCAAGTCGGGCAAGTGGAAGTGCCGAATGGTGAGTTG
TTTTGGTCAAGACAAAAGAGGGTTGGTGTTCGTGCATGCACCGCACCTCG
TTTCGCTTGATTGTTGTGTTTGATATCCCAGGGATGAGAGCGAAGTGCAC
GGACACGAGGTCTACCGCGCTGGGTTAGGTATTCTCGGTTATGATGTTCT
GCAACACATCTTACCTGCCTTGGCGTTGTCGACGCTCCATTTCTCGACGC
TCGCTCGATCCCGTTCGGGGCCACCACACGTTCCTGCTTTTGTAGGTGAC
CCCTTCCATCCGTATTGAACGAACAGCCCCGAGCACACACAACGCCCCCA
CCCCCACCCCGGACGTGGCCTAAATTGTTTTCCGTGGCTCATGATTGGTG
TCTGGAGTTCAACGCTGATTGCTTGGTTTGTTTTTGACCGGCAAGTGCAC
AATGAGGGCACCATTCAGTATATGTTTTGTGTTCCAGCCGAACCTCATTG
TCTCTCGCTCCCCCTTTGCATCCTCTGCGCTATCAATCGCTCCCCCTTTG
CATTCTCTGCGCTATCAATCTGACGTGCCCATCAAGTGCGGTGAGGGTCA
GAGCATCGTCAAGGTGTGGGGTAGAGGGGGTCACGCGAAGGATGTCCGCG
GTCTGGTTATGGCGCTCAACGCCGCCGCCGGGGGAGGGGAAGACCTCAAC
AACGTCTTGCGCAACAACGTTGGAGGATTCGGGCCGCAATCACAATCACG
GCGGCACAAGCAGGACGGCCGAAACTCCAGCGACAGAATCGGGAACCAGG
ACGGCGACCGTGCGTATTCGACGGTTGACCGTGCCGCCCTCCAGCACACC
GTGGGACCGGCACAACCTGGGTTGTACGGGCGAAATAGCAGCTGGGCTCG
ACCTGACGGGTTTGTTCCCGCATGTGTGGCGCCCATCGGTGACGAGCATG
ACCCCGCAGTCGGCTCGTGGCATGTCTCGGGGGCCGAGAAGATGGATGGC
GTGAGCTCGGGGCCGCAGGACTTGTGGGATGGGCGTTCGAATGCAGGGTA
CCCCCGGGCAGGGGAGGCGACGAGGCACCCGAGCGACGGTTTCGGGACAA
GTCGCGAGCACCACCCCGATGTGCGTGCGTCGTGGCAGCCGGGCGCTGAA
CCAGCGGGAGGTGGGGGGAGAAGTGGTAGCCGATGGGGAGCGTTTGCGTC
CAACCGCGCAACGGAGGTCTTGGAGGGGCGCCGAGGGCCCAACCAGGAGG
TACACTAGGCACTACAGTAGTCCTTTGTCATACTGCTCTGGTTTTTGTTC
CAACTGCCTGTGCCTACGTAGTTTTACCTCGGCGGGGAAAATTCGGGTGC
AGTCCGTGTACACAAGCAAACATATGCATACGGACGGGGGTTACATGGAT
GGCACCCTTCTTTTGGCGACAGGTGTCCAAAGAAGGGTTCCTTTCACAAC
AAACAATTTTTTCGCGGACAAGTGTTCGTAACCGGAATCGTTTTTTTCCT
TGGGACGATGTAATTTCACGCCTCCTTTGCGCGTGCCATTCCCGTTTCTA
TCATCTAGAAGACCAAAGCTCGTAGGGTTACAATACCCCCGTGCCATGGC
TTGACACCACCTGCTCTAAAGCTTACTCGAGATCGGGTCTGCTTCACATC
CATCCCCACGCTCTTGCCCGCTGTGCTCTGTGTCTTGTACGTACGTGGAA
GGCGTTACAAGACCCGGATTTCGTCACGTGCCTCGAAACAGCTCCGGCCA
GGCGGCGCGCCAGCCCGACGCCTGGGAAGAGAGGGAGGAAACGCGGCCCA
CCGAGCAGCTCAGACTCGCCAACGGGGCACGGGGCGTCAAGGTTGAGGTA
TCGCAGGACCCTGGAATACCAGCAGCAGGCGGCATCGAACTACGGCGCTA
CGGCGGACTCTGGCGATGCACACGGAGGGGGTGATCCTCAGCGGCAGCAG
AATAATGTGACAATGCGCCGCGACTGGCCCTGCTCATCCTCAAGCGCGCC
AGGCGCGAATCAGGACGGGGACGCGATGGCGTACATGCGGGACGGTGGAT
GGGAAGACGGGAGGCGGGATCCGTGCGGGACGAGCCGTGTTCGTGTTGGT
GTCGTTGAGCAAGAGTGGTCTCGCCCCGCCCACAGCACTAGTGGTCACGG
TGGCATGTCGAGGGACGGGAGTATGTTCCCGTCAGAGTGGAACGGTAGGG
GCAGAAGAAGTAGCACTGCTTCGGCACCGCCGAACAGCAGTGCACCCGGT
GGCACCGGTGTCGTGGGAGCAACAAGCGGTCCCTCTTCATCGTCAAGGTG
GAGCAAGTTTGTGCGATGA
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Coding sequence (CDS) from alignment at chr_00:1588526..1591344+

>Ec-00_001350.1 ID=Ec-00_001350.1|Name=Ec-00_001350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1383bp|location=Sequence derived from alignment at chr_00:1588526..1591344+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAGGGAGGAGGAATAGTATTCCTGGCCCTGCGGTGCTTCTCTTGTCA
GTGTTTTCAAGTCAACCAAAGGACCAAGTCGGGCAAGTGGAAGTGCCGAA
TGTGCGGTGAGGGTCAGAGCATCGTCAAGGTGTGGGGTAGAGGGGGTCAC
GCGAAGGATGTCCGCGGTCTGGTTATGGCGCTCAACGCCGCCGCCGGGGG
AGGGGAAGACCTCAACAACGTCTTGCGCAACAACGTTGGAGGATTCGGGC
CGCAATCACAATCACGGCGGCACAAGCAGGACGGCCGAAACTCCAGCGAC
AGAATCGGGAACCAGGACGGCGACCGTGCGTATTCGACGGTTGACCGTGC
CGCCCTCCAGCACACCGTGGGACCGGCACAACCTGGGTTGTACGGGCGAA
ATAGCAGCTGGGCTCGACCTGACGGGTTTGTTCCCGCATGTGTGGCGCCC
ATCGGTGACGAGCATGACCCCGCAGTCGGCTCGTGGCATGTCTCGGGGGC
CGAGAAGATGGATGGCGTGAGCTCGGGGCCGCAGGACTTGTGGGATGGGC
GTTCGAATGCAGGGTACCCCCGGGCAGGGGAGGCGACGAGGCACCCGAGC
GACGGTTTCGGGACAAGTCGCGAGCACCACCCCGATGTGCGTGCGTCGTG
GCAGCCGGGCGCTGAACCAGCGGGAGGTGGGGGGAGAAGTGGTAGCCGAT
GGGGAGCGTTTGCGTCCAACCGCGCAACGGAGGTCTTGGAGGGGCGCCGA
GGGCCCAACCAGGAGGCGTTACAAGACCCGGATTTCGTCACGTGCCTCGA
AACAGCTCCGGCCAGGCGGCGCGCCAGCCCGACGCCTGGGAAGAGAGGGA
GGAAACGCGGCCCACCGAGCAGCTCAGACTCGCCAACGGGGCACGGGGCG
TCAAGGTTGAGGTATCGCAGGACCCTGGAATACCAGCAGCAGGCGGCATC
GAACTACGGCGCTACGGCGGACTCTGGCGATGCACACGGAGGGGGTGATC
CTCAGCGGCAGCAGAATAATGTGACAATGCGCCGCGACTGGCCCTGCTCA
TCCTCAAGCGCGCCAGGCGCGAATCAGGACGGGGACGCGATGGCGTACAT
GCGGGACGGTGGATGGGAAGACGGGAGGCGGGATCCGTGCGGGACGAGCC
GTGTTCGTGTTGGTGTCGTTGAGCAAGAGTGGTCTCGCCCCGCCCACAGC
ACTAGTGGTCACGGTGGCATGTCGAGGGACGGGAGTATGTTCCCGTCAGA
GTGGAACGGTAGGGGCAGAAGAAGTAGCACTGCTTCGGCACCGCCGAACA
GCAGTGCACCCGGTGGCACCGGTGTCGTGGGAGCAACAAGCGGTCCCTCT
TCATCGTCAAGGTGGAGCAAGTTTGTGCGATGA
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Synonyms
The feature 'Ec-00_001350.1' has the following synonyms
Synonym
Esi0013_0084
Esi_0013_0084