Ec-00_001310.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001310.3
Unique NameEc-00_001310.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length514
Homology
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A6H5KV16_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV16_9PHAE)

HSP 1 Score: 794 bits (2050), Expect = 2.470e-261
Identity = 506/861 (58.77%), Postives = 532/861 (61.79%), Query Frame = 3 
Query:  186 MAIPTSKDEDLLDDEXXXXXXXXXXXXXVAGSDAGTVAPSKXXXXXXXXXXXXXXNNQLAQVQVYETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMINHACRPNCTFVYFGGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDDYLDGVCCTDCGERGCLTPTPPPSAEDILAAQLAQLGEGLADESAANGSGKGMGKKXXXXXXXXX-----SRRETSVNPSAALGAKDGSGNGSRAGGVRGGSESVVQKVYCSACGREYPGTAVEESVARAKALWCGGQTDPRVLCA*DIFTGNFFLLEPSTDGGRLSGHVLMV**PV*VLSLAHSRG*KLPLAVALREHVGLGLRPVEKC*AEVDNQPSGGSRADV*IAPYPWRPTFRSPPRPV*TILIKPFCVSYNLTRVITPSAKAFVAALRSLPGRS*APHPRSPGQVPFRDRLGFVWCLPACRSPPGPPRRDAAMAVVRAKSFSLARKSLEKWLQDYDAVLFCRQPRPRKSRSRRIG*SSTRRTSWLCKPS----CRCRT-----AAPSRKITRLVQALATGCVGYGGGVPGQFPRARRLSRRTGRRERRLATETRPNLAQEVEEPGGYERKQALERAATIRSVCLGKDHPATREAARALDRVTG 2726
            MAIPTSKDE LL+DE             VAGSD GT A SKXXXXXXXXXXXXX +NQLA+VQ+YETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTE+GKIEADVPFAVYCSRACQA+EDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDS SRG+DEEGE GT+GEGLFLRQQW NLYALMHHREAMAP+WISVVRE+GEDLL  LPEW+RFDVEEVVQLACRVNVNAHGLRDDSG+NLVIGVGMFPL AMINHACRPNCTFVYFGGNLEVRTLEPVSAG ELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDDYLDGVCC DCGERGCLTPTPPPSAEDILAAQLAQLGEGLADESAA+GS       XXXXXXXXX     SRRE SVNP                       ESVVQK+YCSACGREYPGT VEESVARAKA W                                                                                                                                                                                     DAAMAVVRAK FSLARKSLEKWLQDYDA      P   K +S +         + +   +      C T     AA +R + R V A+           P  +P               L  +    L ++       ERKQALERAATIRSVCLGKDHPATREAARALDRVTG
Sbjct:    1 MAIPTSKDEGLLEDEQAPAVAAAQDQELVAGSDVGTAALSKXXXXXXXXXXXXX-HNQLAEVQLYETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTEQGKIEADVPFAVYCSRACQAQEDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSASRGIDEEGEGGTIGEGLFLRQQWHNLYALMHHREAMAPEWISVVRESGEDLLHTLPEWIRFDVEEVVQLACRVNVNAHGLRDDSGSNLVIGVGMFPLAAMINHACRPNCTFVYFGGNLEVRTLEPVSAGTELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDDYLDGVCCADCGERGCLTPTPPPSAEDILAAQLAQLGEGLADESAADGSXXXXXXXXXXXXXXXXXGSTASRRENSVNPXXXXXXXXXXXXXXXXXXXXXXXESVVQKMYCSACGREYPGTTVEESVARAKASW-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAAMAVVRAKMFSLARKSLEKWLQDYDAGAVL-PPTATKKKSVKKDRLKLHPANVMVVQTFVTLSNCCTFEEDHAASARHLRRAVSAMEAV-------YPPNYPELGDFHAALADVNDALLQKRGQTLPKKSRSQAVSERKQALERAATIRSVCLGKDHPATREAARALDRVTG 671
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: D8LE87_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE87_ECTSI)

HSP 1 Score: 769 bits (1986), Expect = 1.930e-253
Identity = 408/422 (96.68%), Postives = 408/422 (96.68%), Query Frame = 3 
Query:  186 MAIPTSKDEDLLDDEXXXXXXXXXXXXXVAGSDAGTVAPSKXXXXXXXXXXXXXXNNQLAQVQVYETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMINHACRPNCTFVYFGGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDDYLDGVCCTDCGERGCLTPTPPPSAEDILAAQLAQLGEGLADESAANGSG 1451
            MAIPTSKDEDLLDDE             VAGSDAGTVAPS XXXXXXXXXXXXXXNNQLAQVQVYETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMINHACRPNCTFVYFGGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDDYLDGVCCTDCGERGCLTPTPPPSAEDILAAQLAQLGEGLADESAANGSG
Sbjct:    1 MAIPTSKDEDLLDDEQAPAVAAAQDQELVAGSDAGTVAPSXXXXXXXXXXXXXXXNNQLAQVQVYETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMINHACRPNCTFVYFGGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDDYLDGVCCTDCGERGCLTPTPPPSAEDILAAQLAQLGEGLADESAANGSG 422
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A7S2WGS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGS0_9STRA)

HSP 1 Score: 186 bits (473), Expect = 9.840e-48
Identity = 135/393 (34.35%), Postives = 189/393 (48.09%), Query Frame = 3 
Query:  477 VLREPPFVKVVRRDCASRQCAYCCQQVT-------ERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPE-------WVRFD------------VEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMINHACRPNCTFVYF--GGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDD-----------------YLDGVCCTDCGERGCLTP-------TPPP--------SAEDI--LAAQLAQLGEGLADESAANGSGKGMGKK 1469
            VL E PF  +V RD     C  CC ++T       +R  +++       C  +C+ R    R  E   L  L  I+A    D+DL+R+++RL+ +R   L       + + VS    E G     GE       WE L +L+HHRE    DW+ VV  +   +L LLP+       W++ D            + E+V LA R+N NAHG+RD  G N  +G+GMFPL AM NH+CRPNC + +    G++++RTL  V+ G ELSV YIDL Q+TA+RRQ+LL +K+F C+C RC +   +D                  YL G CC  C       P        PP         SA+D+  L A+L  L  G   + +A   GKG G K
Sbjct:    1 VLAEQPFGFIVARDVLWDYCHACCSRLTSSDQAPSQRQPLQSPDFVPATCGESCRVRLAPTRDLEQRILPHLQEIAATCHTDVDLVRLVVRLVTSRCVQL-----QQEKEGVSEASQEAG-----GERAT---SWERLLSLLHHREHQPEDWLRVVESSLAQVLPLLPDEVYQASFWLKADNDAAQHLDDQVVLTELVHLAARINSNAHGMRDIEGRNANVGIGMFPLFAMFNHSCRPNCAYTFSPTDGSMQIRTLCSVAKGEELSVAYIDLYQTTASRRQQLLATKNFWCQCGRCRSSEGVDGSAEEPARTGLSADPVDLYLRGFCCALCPSSVTNEPYSLLLLENPPTTGRGGAKASADDLEGLVAELEGLESG---KKSAGKKGKGKGNK 377
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A7S3YH42_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH42_HETAK)

HSP 1 Score: 176 bits (445), Expect = 1.290e-44
Identity = 104/288 (36.11%), Postives = 155/288 (53.82%), Query Frame = 3 
Query:  432 GRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTE-RGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMINHACRPNCTFVYFGG-----NLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSR 1277
            GR  IA R+L AG+++  + P   ++ +    + C  C   V   R +   D P+ VYC  AC+AR+ A R  E +A  ++  ++A  +VD+DLLRML ++L   A    LR  +G  D +                      WE +  L  HRE    +W++ V +  E LL L+P   +  V+  V LACRVN+NAHG+ D SG N  +G GMFP  A++NH+C+PN  +  FGG      + VR L P+ AG E++++YIDLLQ+   R++EL  ++ F C C R
Sbjct:   65 GRHGIARRNLDAGDVIFEDEPLAFIIAKPHKDQFCTLCAGPVARARRQAGGDSPYHVYCGPACRARDAACRVLEDAACKQVDALAAEAEVDVDLLRMLAKMLARHA----LRARAGAEDPL----------------------WEGVLQLQTHRENTTAEWLACVEKGVERLLALMPAQAQVAVDLGVDLACRVNMNAHGIGDASGRNASVGFGMFPRVALLNHSCQPNAIYT-FGGPPGAQTMAVRALAPLRAGEEVTLHYIDLLQARGDRQRELQATRFFDCACPR 325
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A8H7SEY2_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SEY2_9FUNG)

HSP 1 Score: 181 bits (458), Expect = 5.950e-44
Identity = 117/340 (34.41%), Postives = 170/340 (50.00%), Query Frame = 3 
Query:  378 YETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMI-NHACRPNCTFVYFG-GNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENP--SSMDDYLDGVCCTDCGERGCLTPTPPPSAEDI 1385
            YE +       +      GR   AS+ L  G  +  E     VVR D     C  C   +T +  + +D   + YCS+ C  ++    A   S +  +  I+ A DVD+DLLR++  LL         ++   D      G D++ +  T     +  +       L+ HR    P ++ VV+EAGE LL  LPE ++  V++++ LACR+N NA+GL D+   N  + +G+FP++ M  NHAC PNC FV    G L  RT+ PV  G EL+V YIDL  S   RRQ+LL SK+F CKC RC +P   S+D +L  + C  C E   +   PP   ED+
Sbjct:   48 YEQVMQTYPVFLRSTKAKGRHATASKQLDEGTTIFYEQATAFVVRSDYIDEHCHVCLDLLTTK-MMCSDCQKSFYCSKKCFEQDSDTHALVCSPMAVIDSIARATDVDVDLLRLITLLLARXXXXXXXKDAPDDG-----GNDQQKQQATAPTPFWCTKD------LISHRNHANPAFVRVVKEAGERLLSELPESMQIPVDDLLTLACRINSNAYGLGDNEARNTDVALGLFPVSGMFFNHACNPNCAFVGVQHGQLTFRTIRPVKQGEELTVTYIDLYASRDERRQDLLDSKNFWCKCKRCTSPMEQSVDRFLQSIMCEKCHED--VYVIPPSPMEDL 373
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A835YT35_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT35_9STRA)

HSP 1 Score: 181 bits (460), Expect = 8.250e-44
Identity = 122/321 (38.01%), Postives = 150/321 (46.73%), Query Frame = 3 
Query:  633 ALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWV----------RFDVEEVVQLACRVNVNAHGLRDDSGANLV------IGVGMFPLTAMINHACRPNCTFVY------------------------FGGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENPSSMDDYLDGVCCTDCGERGCLTPTPP--------PSAEDILAAQLAQLGEGLADESAANGSG 1451
            A+R AEA AL  +  I+   DVD  LLRM+ RL   RA A         +DS +                     W+N+ ALM HR+A   DW + VR A   L   LP             R   +E+V LACRVN NAHG+ D  G          +G G+FPL AM+NH+C PNC + +                          G +EVRT+  V+AG EL VYYIDLLQST AR++ELL +KHFLC C+RC NPS  D  L   CC  CG RG L P           P   D L A+L   G   A + A  G G
Sbjct:    9 AIRDAEAEALRHVPDIARRHDVDSALLRMVARLCAVRAAA--------GADSTT---------------------WQNVLALMPHRDAKGADWRAAVRAAATALAPHLPGAAAPAAAAAAQQRPSADELVDLACRVNTNAHGMVDHGGXXXXXXXXXXLGFGLFPLVAMLNHSCTPNCAYTWNASSGCGGDXXXXXXXXXXXXXXXXXGRMEVRTIADVAAGEELCVYYIDLLQSTPARQEELLRTKHFLCACTRCANPSDADRALAAACCPSCGPRGALLPASQASLLQRSTPDDVDALLAELELTGGDRARKGAKGGKG 300
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A8H7SZK7_9FUNG (SET domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SZK7_9FUNG)

HSP 1 Score: 177 bits (448), Expect = 1.140e-42
Identity = 114/316 (36.08%), Postives = 158/316 (50.00%), Query Frame = 3 
Query:  432 GRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMI-NHACRPNCTFVYF-GGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENP--SSMDDYLDGVCCTDCGERGCLTPTPP 1367
            GR  +A+ +LK G ++  E     VVR D   +QC  C   +     + +D   A YCS+ C   +D L       + ++  I  + DVD DLLR++  L+  + +     E SG   +              G+G      +  +  L+ HR+   P +I+VV EA + LL  +PE +   VEE+V LACR+N NAHGL D+   N    +G+FPL A   NH C PN TFV    G L +RT+ PVS   EL + YIDL      RRQELL +KHF CKC RC  P   S+D +L G+ C  C     + P  P
Sbjct:   72 GRHAVAAENLKEGTVLCTEQATAFVVRSDFIDQQCHVCLDDLEGEKLMCSDCNKAFYCSKTCMENDD-LHPVICGPISQVDAIGRSTDVDSDLLRLMTILMACKERD----EKSGRKWT--------------GDGEIQHTPYWCVDELVSHRDLTEPAFINVVTEASQRLLYEMPESIHIPVEEMVTLACRINSNAHGLGDNQSRNTDAALGIFPLCASFYNHGCNPNATFVGLPNGELSIRTIRPVSKDEELVMSYIDLYCDRDERRQELLATKHFWCKCKRCTGPIEKSVDRFLHGIVCKQCTNDVYVIPPTP 368
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A8H7QIY6_9FUNG (Uncharacterized protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7QIY6_9FUNG)

HSP 1 Score: 175 bits (444), Expect = 3.260e-42
Identity = 112/331 (33.84%), Postives = 167/331 (50.45%), Query Frame = 3 
Query:  408 KVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMI-NHACRPNCTFVYFG-GNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENP--SSMDDYLDGVCCTDCGERGCLTPTPPPSAEDIL 1388
            K+      GR  +A  +L+ G  + +E     VVR +   +QC  C   + ++  + +D     YCS+ C  +++ L       + +   I  A DVD DLLR++  L+  +                   +D + +D    EG+     +  +  L+ HR+   P +I V+ EA + LL  +P+ ++F V+E+V LACR+N NAHGL D+   N  + +G+FPL A+  NH C PN  F+    G L  RT+ PVS   EL V YID+      RRQELL SKHF CKC RC +P   S+D +L GV CT C +   +   P  S E +L
Sbjct:   58 KLNNSKAKGRHAVAQTNLQEGITLCQEQATAFVVRLEYLDQQCHVCLSDLKQK-MMCSDCKKVFYCSQDCLEKDNDLHVLVCGPIAQTEAIGQATDVDADLLRLMTILMARKY------------------LDTQKQDNK--EGVIQPTPYWCVEDLISHRDNAEPAFIKVLTEASQRLLMEMPKTIQFSVDEMVTLACRINSNAHGLGDNQSRNTDVALGLFPLGALFFNHGCNPNTAFIGLSNGQLAFRTIRPVSKDEELIVSYIDIYSDRDERRQELLLSKHFWCKCKRCTSPIEKSVDRFLQGVVCTQCKDD--VYVVPATSVEHLL 365
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: S2JCU3_MUCC1 (Uncharacterized protein n=4 Tax=Mucor TaxID=4830 RepID=S2JCU3_MUCC1)

HSP 1 Score: 171 bits (434), Expect = 6.010e-41
Identity = 112/321 (34.89%), Postives = 163/321 (50.78%), Query Frame = 3 
Query:  408 KVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMI-NHACRPNCTFVYFG-GNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENP--SSMDDYLDGVCCTDCGERGCLTP 1358
            K+      GR  +A  +L+ G  + +E     VVR +   +QC  C   + ++  + +D     YCS+ C  +++ L       + +   I  A DVD DLLR L+ +L+ R K L  +      D+ +R                    W  +  L+ HRE+  P +I V+ EA + L+  + E ++  V+++V LACR+N NAHGL D+   N  + +G+FPL A+  NH C PN TF+    G L  RT+ PVS   EL V YIDL      RRQELL SKHF CKC RC +P   S+D +L GV C+ C E   + P
Sbjct:   58 KLNNTKTKGRHAVAESNLEQGITLCQEQATAFVVRSEYIDQQCHVCLSDLKQK-MMCSDCKKTFYCSQDCLEKDNDLHVLICGPIAQTEAIGRATDVDADLLR-LMTILMAR-KYLDTQSQDETKDAAARPT----------------PYW-CVQDLISHRESAEPAFIKVLTEASQRLVMEMSEKIQLPVDDMVTLACRINSNAHGLGDNHARNTDVALGLFPLGALFFNHGCNPNTTFIGLSNGQLAFRTIRPVSKDEELVVSYIDLYSDRDERRQELLQSKHFWCKCKRCTSPMEKSVDRFLQGVVCSKCKEGVYIIP 358
[Close]
BLAST of Ec-00_001310.3 vs. uniprot
Match: A0A1X2HGI4_SYNRA (SET domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HGI4_SYNRA)

HSP 1 Score: 171 bits (433), Expect = 7.960e-41
Identity = 115/324 (35.49%), Postives = 157/324 (48.46%), Query Frame = 3 
Query:  408 KVTEDSVSGRCVIASRDLKAGELVLREPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDALRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSDSVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAGEDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLTAMI-NHACRPNCTFVYF-GGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQELLTSKHFLCKCSRCENP--SSMDDYLDGVCCTDCGERGCLTPTPP 1367
            ++  +   GR  +A+ DL  G  V  E     VVR D   +QC  C   +T +  + +D   A YCS+ C  R+D       SA+ ++  I+ + DV+ D LR++  LL  RA+                GV EE          +  +       L+ HR    P ++ V  EA   LL  LPE  +  V+E++ LACR+N NAHGL D+   N  + +G+FP+ AM  NHAC P C FV    G L  RT+  V  G EL+V YID+      RR  LL SKHF CKC RC  P   S+D +L  V C  CGE   + P  P
Sbjct:   61 ELRSNKAKGRHAVAAADLPKGTTVCHEKGTAFVVRSDYLDQQCHVCLASLTTK-LMCSDCQKAFYCSQTCLERDDT-HTLVCSAMAQVDAIARSTDVEPDFLRLIALLLARRARG---------------GVQEEEPVPNAPTPYWCTED------LVSHRSKADPGFLEVFGEAAPRLLSELPEQAQIPVDEIITLACRINSNAHGLGDNEARNTDVALGLFPVGAMFFNHACNPTCAFVGTENGKLAFRTIRDVGQGEELTVSYIDVYAPRDERRNTLLGSKHFWCKCKRCTTPMDESVDRFLQSVTCDQCGEDVYVIPPAP 361
The following BLAST results are available for this feature:
BLAST of Ec-00_001310.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV16_9PHAE2.470e-26158.77SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LE87_ECTSI1.930e-25396.68SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2WGS0_9STRA9.840e-4834.35Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3YH42_HETAK1.290e-4436.11Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8H7SEY2_9FUNG5.950e-4434.41Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A835YT35_9STRA8.250e-4438.01SET domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A8H7SZK7_9FUNG1.140e-4236.08SET domain-containing protein n=1 Tax=Thamnidium e... [more]
A0A8H7QIY6_9FUNG3.260e-4233.84Uncharacterized protein n=1 Tax=Mucor plumbeus Tax... [more]
S2JCU3_MUCC16.010e-4134.89Uncharacterized protein n=4 Tax=Mucor TaxID=4830 R... [more]
A0A1X2HGI4_SYNRA7.960e-4135.49SET domain-containing protein n=1 Tax=Syncephalast... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1559114..1571917 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score796.6
Seed ortholog evalue6.9e-228
Seed eggNOG ortholog2880.D8LE87
Length6946
KEGG koko:K11426
Hectar predicted targeting categoryother localisation
Gene idEc-00_001310.3
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001310Ec-00_001310Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1559114..1571917 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001310.3.12Ec-00_001310.3.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1559114..1563437 -
Ec-00_001310.3.11Ec-00_001310.3.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1564418..1564573 -
Ec-00_001310.3.10Ec-00_001310.3.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1565435..1565582 -
Ec-00_001310.3.9Ec-00_001310.3.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1566157..1567112 -
Ec-00_001310.3.8Ec-00_001310.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1567620..1567703 -
Ec-00_001310.3.7Ec-00_001310.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1568108..1568249 -
Ec-00_001310.3.6Ec-00_001310.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1568445..1568653 -
Ec-00_001310.3.5Ec-00_001310.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1568826..1568914 -
Ec-00_001310.3.4Ec-00_001310.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1570058..1570297 -
Ec-00_001310.3.3Ec-00_001310.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1570934..1571026 -
Ec-00_001310.3.2Ec-00_001310.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1571265..1571749 -
Ec-00_001310.3.1Ec-00_001310.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1571898..1571917 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0013103UTR:Ec-00_001310.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1559114..1563437 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001310.3CDS:Ec-00_001310.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1566746..1567112 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0013105UTR:Ec-00_001310.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1571583..1571749 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001310.3Ec-00_001310.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1566746..1571582 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001310.3 ID=Ec-00_001310.3|Name=Ec-00_001310.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=514bp
MAIPTSKDEDLLDDEQAPAVAAAQDQELVAGSDAGTVAPSKKKKKKKKKK
KSPQQNNQLAQVQVYETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLR
EPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDA
LRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSD
SVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAG
EDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLT
AMINHACRPNCTFVYFGGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQ
ELLTSKHFLCKCSRCENPSSMDDYLDGVCCTDCGERGCLTPTPPPSAEDI
LAAQLAQLGEGLADESAANGSGKGMGKKKGGGGGSTTSRRETSVNPSAAL
GAKDGSGNGSRAGGVRGGSESVVQKVYCSACGREYPGTAVEESVARAKAL
WCGGQTDPRVLCA*
back to top

spliced messenger RNA

>Ec-00_001310.3 ID=Ec-00_001310.3|Name=Ec-00_001310.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6946bp|location=Sequence derived from alignment at chr_00:1559114..1571917- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GAGAGGGAGCGAGGGCGTGTGCTCTGGCTCCCTCTCTCCCCTCCACGCAG
ACGTGACAAGGAAGAGGAGAGAGTGAGATCGAGAGACGAAGCAGCCTGGC
CCCCTGCACTTTCAGGAGAACGCCGTGGATGTGGACAGAAAGAAGCGTGA
CTTGAAGTCGGATTGCATCAGACGGACGAACGAGCTGATGGCGATCCCCA
CATCGAAAGACGAAGACCTCCTCGACGATGAGCAAGCCCCTGCTGTCGCT
GCTGCGCAAGACCAAGAGCTTGTGGCAGGTAGTGATGCAGGAACGGTTGC
TCCGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGTCTCCGCAGC
AAAACAACCAGCTCGCGCAAGTCCAGGTCTACGAGACGATCAAGGACCTG
GACACCTTCAAGGTCACCGAGGACAGCGTTTCTGGTCGATGTGTGATTGC
CTCCAGGGACCTCAAGGCGGGGGAATTGGTCCTGCGCGAACCTCCGTTCG
TCAAGGTTGTGCGTCGCGACTGTGCTTCCCGGCAGTGTGCCTACTGCTGT
CAGCAAGTCACCGAGCGGGGAAAGATCGAAGCAGACGTGCCGTTCGCGGT
CTACTGCAGTCGCGCATGCCAGGCCCGGGAGGACGCCCTTCGCGCGGCAG
AAGCTAGCGCTCTCGGCAAGCTTGCCGGTATCAGCGCCGCGAGGGACGTG
GACATTGACCTACTCCGAATGCTCCTTCGGCTGCTGATCACGAGGGCGAA
AGCGCTTGGTCTGCGTGAACCGAGTGGCGACAGCGATAGCGTTAGCCGAG
GCGTAGACGAGGAAGGCGAGGATGGCACGATGGGGGAGGGCTTGTTCCTG
CGTCAACAGTGGGAAAACCTGTACGCTCTCATGCACCACCGGGAGGCCAT
GGCTCCGGATTGGATCTCAGTCGTACGGGAAGCGGGGGAGGATTTGCTGC
AACTTTTGCCGGAGTGGGTCCGCTTCGACGTGGAGGAAGTGGTGCAGCTG
GCCTGCCGAGTCAACGTGAACGCCCACGGCTTGAGGGACGACTCGGGCGC
GAATCTCGTGATCGGCGTGGGGATGTTCCCGCTGACGGCCATGATTAATC
ATGCGTGCAGGCCTAACTGCACGTTCGTGTACTTCGGTGGAAATCTGGAG
GTCCGCACGCTGGAGCCGGTGTCTGCCGGGGCAGAGCTAAGCGTGTACTA
CATCGACCTGCTTCAAAGCACCGCCGCGAGACGGCAAGAGCTTCTCACGT
CGAAGCACTTCCTGTGCAAATGCTCCAGGTGCGAGAATCCCTCGAGTATG
GACGACTACCTCGATGGAGTGTGTTGCACCGACTGCGGAGAGAGGGGCTG
CCTCACGCCCACCCCCCCGCCAAGCGCGGAAGACATCCTGGCGGCCCAAT
TGGCACAACTCGGCGAGGGCTTGGCCGACGAGTCCGCGGCTAACGGGAGC
GGTAAGGGCATGGGCAAGAAAAAGGGCGGCGGCGGTGGTAGTACCACTTC
GCGTCGTGAAACTTCAGTCAATCCCTCCGCCGCCTTGGGCGCGAAGGACG
GCAGTGGGAACGGTAGCAGGGCTGGTGGCGTCCGTGGCGGAAGTGAGAGC
GTGGTGCAGAAGGTGTACTGCTCTGCGTGTGGGCGGGAGTACCCGGGCAC
GGCGGTCGAGGAGAGCGTGGCACGAGCTAAGGCCTTATGGTGTGGCGGAC
AGACAGACCCCCGTGTTCTGTGTGCCTAGGATATTTTCACAGGAAATTTT
TTTTTGCTGGAGCCCAGCACAGACGGGGGAAGACTGTCAGGGCACGTACT
TATGGTGTGATGACCAGTGTAGGTGCTGTCTTTAGCCCACTCCCGAGGCT
GAAAGCTTCCACTCGCTGTGGCGCTGCGCGAACACGTTGGCCTCGGCTTG
AGACCGGTTGAAAAATGCTAGGCAGAAGTCGACAACCAGCCCTCAGGAGG
GTCTAGGGCTGACGTGTGAATCGCGCCTTACCCTTGGCGACCAACCTTTC
GTTCTCCACCACGTCCAGTTTGAACCATTCTGATCAAACCCTTTTGTGTA
TCATACAACTTGACCCGGGTAATAACCCCGTCCGCCAAAGCCTTTGTAGC
GGCCCTTCGTAGCCTACCAGGTAGGAGCTAAGCCCCCCATCCTCGGAGCC
CTGGCCAAGTCCCCTTCCGTGACCGCCTTGGCTTCGTCTGGTGCTTGCCC
GCGTGTCGTTCCCCTCCCGGCCCTCCCCGCAGGGATGCCGCTATGGCGGT
CGTTAGAGCGAAAAGTTTTTCTTTGGCCAGAAAGTCTCTTGAAAAGTGGC
TCCAGGACTACGATGCAGGTGCTGTTCTGCCGCCAACCGCGACCAAGAAA
AAGTCGGTCAAGAAGGATAGGTTGAAGCTCCACCCGGCGAACGTCATGGT
TGTGCAAACCCTCGTGCCGCTGTCGAACTGCTGCACCTTCGAGGAAGATC
ACGCGGCTAGTGCAAGGCACTTGCGACGGGCTGTGTCGGCTATGGAGGCG
GTGTACCCGGCCAATTTCCCCGAGCTCGGAGACTTTCACGCCGCACTGGC
AGACGCGAACGACGCCTTGCTACAGAAACGCGGCCAAACCTTGCCCAAGA
AGTCGAGGAGCCAGGCGGTTAGCGAACGAAAGCAGGCGCTGGAGAGAGCG
GCGACGATTAGATCGGTCTGTTTGGGAAAAGACCACCCAGCCACGAGAGA
AGCAGCTAGAGCGTTGGATCGAGTCACCGGGTGACGGTATGACGCGCACT
CGTGATGGTGACTACAGTTGTTGGGTGGAGAGCAACCACGACCTTGACAT
ACAACCTGGTACGGGAGTAATGCACAACGCTCAGAGGGAGAGACTTGACA
AAAGTGCAGCATGACGAAAGTGCGGCATGATGTACTTGTTGCTTGTTCCT
TCCTTTTGGTGCCTCATGGAGTTGGCCAGACTTCGGCGATAGCGTTATGG
TTCTGTGGGGTCGTCGGGTTGCGCGTAGCACTTCTCTGATTGGTTGGCGA
ATTTTCCGTCGTAGATGAGGTTCTTCGTGTTCGCTGATTGGTTGGACTAT
TCACCGTCGTAGATGGGGTGCTTCGTGCTCGCTGATTGCTCGGAATTTTC
ACGATCGTAGATGAGGTGCTTCGTGCGCGCTGATTGGTAGGAGTAACTCC
GTCGTAGATGAGGTGCTTCCTTCGCGCCGGTGCGGGCCGAAACGGCCAGA
ACAACGGCGTCGGCGACGGCCATTGCTTTGCTTCTCTCGCGCCAATATTT
CCGAACGGTACACTTTGGGGTTGTTGTGTGCCAGTTGTACGTCGGCAGCA
GCAGCAGTCGGTGCGGCGGAAGAAAGAGCCCGGTCTCCTTCCTTCTGCCT
GCTTCGCATATTGGCTCAAGCCAGTCGAGAACGCAGTGGTAAAATGTTGG
CGTTTTTCTTCGGTGTCACGGAGGTTGTAGCAGATCAAGGCTTGGTTGCC
GAAAAAAGGTACGAGAGGCTTCTTGTTAGGGCCCCTGGATATGAATGAAC
GACGATTGTGACAAGCTGCCTCAAGCATGGACTGTTCTTGTTGCTATTCT
CGTAACCATCAGTCTATCGTAGCGACGTTGGTAGCGATTCACGGAGAATG
GGCAAACGAGATACAAAGTAGTACTTCATACATGCCCCGGTGGTTCTCCA
CCAGGTACCTCCTGAGGCTTCCACAACTGAGCTAAGCCCCGGAGCTCCGT
TGCTGCCGGCAGACATGGAACGAGAACCAACCAATCTTCGGCAACGATAA
CGCGACATTTTCGGTCTCCTCTTGCTCATTGATTGGCTTAGCCACCCTCG
CAACACCCTTGGGATGCAAACCTGGAGCCCTATCCTATCCTACGACGTTC
CTTCCAAAACGGAAATAGTCGAGTCTTTCCACCTTGGTTTGGCCACTACA
GCAGCAGTACAGCATGGTGGCGGGGTCAAATGAGCCGTTGAAACCGCGCC
TTCGTCCGGAGGGGAGGTTTACCCCCTCAACCACATTGTTATAATAGGTG
GTCTGTACCGCGTTGCACCGCTCTGGGCGGTTAAGTTACTTGGGTGGCTC
GCTTGCCAGGGAAACCTCTTCTTTGATAAAAAAGTTCATTTAGCTGCTGA
GCGAGCCGGCGTGCGACTCAACCTGTCAACCTGACGCTCACGGACCTCCA
CCAACACGTACATTCCTGGGGTACATGCAGCTTTTCCTTTTTCCACACTT
CAAGACGACAAAACAACACAACATAGAATACGACAACGACGCGCAGATTG
ACCATAAAAAACACTTGGGGCACTTGTGTTCCAGTAAGACAAACGCGGTC
ACCACACAAATAAATACCAAGTCATCGCGCAAGTAAATACCATGGTACGA
ACCAAAAATCGTGCAATACCAAACAAAAAGCTGTCGCCGCCGAATCAACC
TGCTGCAACACCGACGCACGATGGACGGCACACGCAACCAGACCACAAGG
ATGCGGCGCGGCCGTGCTTGCTTGAGACCACGCCAACTTGTCATGAAGCA
CAATGCACGCAAAGAGCACTCGGCACGCAACCTTAGCGAATAAAAATCAA
GAGAGTTCGAGGAAGAAAGAAGGAAGGAAGCCACTCCGGGCCAAGGTCTG
CAAGGGATACATGCCTGCAGCGACAGCCCCGAACGCCTCCTTCTTTTTCG
TGACACAGAAAGAGCGTTGGTTTTCTCGGCCGTTACAAAGCTGGAGTTTG
CTTCGACGTGACCTCCGAAAAAGAAGGAGGAACACGCGGAAACACTACTG
GACTACAGCAGTTTACCTTGCGAGAGGCGTCTACAAGACAGTCACGGTCC
CAAGCGTGCTGACACAACAAAAATACAGAAGGACGGAGTCGCCTCCCGCA
CGAAAAAAAGGCGGGGGGGGGGATGCGAAACAAAGAACAATATCGGGACG
CACCTTCGAGAGCGGTTCGAAGAAGAACCATCTACCGAATAGAGGCCCAG
AGCGTTTAATAACGTGAACAAGATGGACAACGACGACGAATATCCACAAC
AACAATTCATCACAGAAGAAACAGGGTTCGGAACATGTTACACATCGCAC
ATCGAATTCGACAACGGACGCCGGGCACAAAATTGGGGGGGTACATGAGG
AATAGAAATCCCCATGTCACGCGCCTACAGGAGAAATGGCACACCAAATG
AGTAAGAACATGTCTATTTCCATGACGAAACAGAAAGAACAGGCAAGATG
ACACTCCCCCAAAAACAGAGAGCACAAAACACGGCCCACACACGGACTAC
CGCCGTATAGGCGAGTCAGTTGCTCAGCAAACCCGTCGCATTCTTCCAAG
CACCCGCACGTCTACGCACGACATTACCGTCTTGCGTGGCACATGACACG
TCGGGGAAGCAGACCACAACCGCCTAGCACCGCAATCTGTGACTTCACCA
CCTACTCCGAGTATTTAACACCGCCTGGATGTAGGAACATCGTTTCATCG
CCAGAATGACCATCCTCGGGGTGGCGTACCTACGGACGTGTGCAGGCAAA
ACGCCAACCTCCCGGTAAAAATACATGAGGCCTTCACCCCGCTACCACTC
ATCAACTGTAAACATTAGCCGGGGGGGGGGGCATAGGGACTGCGCCCTTC
CAAAACAACAGCATCCACATTAACATGAAGCATCACATATAAATCACCAC
AAAACCAGCGAACCATCGGCCGAAATGCCTTTTCAAAACAAAAACGCTCG
CCCGCAACGATATCATGCAAACCAGCGGCACCAAAAATCCGCAGATCAGA
TAGCAATCTTCCCAGAGATACGACAAAGGTGGACAAGAAATTCACAGAGA
AAGAAAATAGAATCAACTCGTGCCGCAACGCTCAGAGCGTCCACACGCTG
GTACTACTTGGACCGTTTCGGCTGCCAGTCTCACACTCTGCTTTCTTCCT
GATACGGACGAACAAAACGCCTTCTGATTTCCACGGCAGTCGAAAATGTG
ATCACCAAGACAAATACAATACGCAGACTATCCAGCATCCTGCAGAGTGT
AGACAAAGAAAAGGCAAGTACAATGACAGCGTCACCACGCACCTGTTTCT
CGACTTGCACCTACCTCAACTTCAAACTTACCGCCACGGGCGCTGTCATC
GCCGCGACATCTGTCAACCTGACAACAGTGACGTCATTGTTGTTCTTCAA
CCTTCAACAGCGGAAAGGTTCCCTCACGGAACGCGCGATCCATGAACCAC
GCGCCGCTCGACACCAACACACCAAAACCAACGCCAACGAAGTACAGCGT
GTCATCACGTCTACGACATCTACGACATGTACGATTTTTCAATTCGACCT
ACACCACTTCACCCTTCATCAGTATTCTAGCGCTGCTTGGGTGTTGCAGA
ACGCGGACAGCTGGCACTTCCGGCGCAAAATGCGACCTCTCACGCAACAT
ACTACTAGACATCGAATCATCTATGTGATCAATTGGTAAACATGAAGTTT
ACGTGTTGGTGGAATAGACCCGCAACGCACGACACCAAACCCCAACCATG
CAAAAAAGGAGGGGGGCTATTTAAGAAACGAAAAGAAATAAAAACATCTA
TCCCAATAAGGCTATTGGTCGGGGTCAGCAGTCACGCTTGCCTACAACTC
TACATTAGCCACACACAAGTTCTGCCACCCCCTTGATCCATTCGGTCTTT
GTCCCGCCGACAATGCTTGAGCTTTCACACTTTCCTCTCTTCAACGATAG
CACTGAAAACAGAGCCGAGACTTGCAGCAGACTTAGACCATTCACCAGCA
TCACATATCGTCAACTTTGCCAAACTCTCTATTAAACAGTCACCACCGAC
ATCACTGTTTGACTCGCTCATCCGCTGCCATGATCCATTCACGATCCCTA
TCGCTATCATCGCTTTTCTCATGCCTCCCCTACGGCAAGACAAGCCAACA
GGACACACGGAAGGACGAGGTTGTCCACCTGAAAACGCCAATCGAT
back to top

protein sequence of Ec-00_001310.3

>Ec-00_001310.3 ID=Ec-00_001310.3|Name=Ec-00_001310.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=514bp
MAIPTSKDEDLLDDEQAPAVAAAQDQELVAGSDAGTVAPSKKKKKKKKKK
KSPQQNNQLAQVQVYETIKDLDTFKVTEDSVSGRCVIASRDLKAGELVLR
EPPFVKVVRRDCASRQCAYCCQQVTERGKIEADVPFAVYCSRACQAREDA
LRAAEASALGKLAGISAARDVDIDLLRMLLRLLITRAKALGLREPSGDSD
SVSRGVDEEGEDGTMGEGLFLRQQWENLYALMHHREAMAPDWISVVREAG
EDLLQLLPEWVRFDVEEVVQLACRVNVNAHGLRDDSGANLVIGVGMFPLT
AMINHACRPNCTFVYFGGNLEVRTLEPVSAGAELSVYYIDLLQSTAARRQ
ELLTSKHFLCKCSRCENPSSMDDYLDGVCCTDCGERGCLTPTPPPSAEDI
LAAQLAQLGEGLADESAANGSGKGMGKKKGGGGGSTTSRRETSVNPSAAL
GAKDGSGNGSRAGGVRGGSESVVQKVYCSACGREYPGTAVEESVARAKAL
WCGGQTDPRVLCA*
back to top

mRNA from alignment at chr_00:1559114..1571917-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001310.3 ID=Ec-00_001310.3|Name=Ec-00_001310.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12804bp|location=Sequence derived from alignment at chr_00:1559114..1571917- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GAGAGGGAGCGAGGGCGTGTGCTGCTCAAGGCGGCGGAATCATGATAAAA
GGGATCAAGGGATCACGCCTCCGCATTCCACCAGTCCCGTCCAACGTATG
TTTCGCCGCACATCTCCGTATTTCCTGGCCACACACCATCGCCTCGGGTC
ACAGCGCCCACCCCCTAGGCTCTGGCTCCCTCTCTCCCCTCCACGCAGAC
GTGACAAGGAAGAGGAGAGAGTGAGATCGAGAGACGAAGCAGCCTGGCCC
CCTGCACTTTCAGGAGAACGCCGTGGATGTGGACAGAAAGAAGCGTGACT
TGAAGTCGGATTGCATCAGACGGACGAACGAGCTGATGGCGATCCCCACA
TCGAAAGACGAAGACCTCCTCGACGATGAGCAAGCCCCTGCTGTCGCTGC
TGCGCAAGACCAAGAGCTTGTGGCAGGTAGTGATGCAGGAACGGTTGCTC
CGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGTCTCCGCAGCAA
AACAACCAGCTCGCGCAAGTCCAGGTCTACGAGACGATCAAGGACCTGGA
CACCTTCAAGGTCACCGAGGACAGCGTTTCTGGTCGATGTGTGATTGCCT
CCAGGGACCTCAAGGCGGGGGAATTGGTCCTGCGCGAACCTCCGTTCGTC
AAGGTGCCCTTTTTGTCTCCTTGAGACCGTTGGATGTGAAAGTTAATCAG
TTGGGGGTCGTTTGCTGTTCTCATGTGCACAGCAGTGTTTATACCGGGGT
GATTCGAGCACCAACCGGGTGCGGACGATACATTTTGGCGGTTCTGTGAG
GCACACATACTACACGAGATGGACACGAGGTCCATGTTTTTCCTGCCCCG
CTGTCTCTCACCTTTTCTCTGCTGTGGCCGCCACGAAACAGGTTGTGCGT
CGCGACTGTGCTTCCCGGCAGTGTGCCTACTGCTGTCAGCAAGTCACCGA
GCGGGGAAAGATCGAAGCAGACGTGCCGTTCGCGGTGAGAGTACAACAGT
CGTCGTCACGATGATGATCAATATAAATTTCAGCGCTGGAATCTTTTCCC
GCTATGAACGCAGCGCGTCCTCCATCCTCGTGTACGATGTCGACTTTGAT
GGCATGAGGGCAACCCTTGAGTTGAACACGTGGGGCAAGAAGCAACAGGG
TGGGTCAAAACCGGTTGCATACGTGGGTCTCAGCAGCGAACACGTGGGCG
TACACGAAGCTGGCGTGCTTGTTAATTGTGCTTGGTCGGCACGAGTACCG
TGCATCAATTCCGTATGTTACTGTGGTAGGTCATACAGAGAGGAAAATGG
TGGGCTCTATTGGCAATACCCCATTCGTGAAATATAAAAATACGTCCAAA
GAAACGCGAGGAAACGCGACTTTCGGGAAATTAATTCCGTGACAGAGGAA
ACGTCAAAGATGAACGTAACGATAGGAGCACCTGCGAGCTGTTCTGGCTT
AATCCACAGCCACTCCGAGACGTGTATACACAGAAGCTTTCAGGCTTTGC
TGATGTGTTCCGACGGCTGTCGTGTGTTGCACAGAACTTGGACATTCGAT
TTCTTTCTTGCACACGCTCCGACACTAAACTACTTCAACATTCAAACGGG
AAACGGTTCCTCTCGCGAAGGTCTACTGCAGTCGCGCATGCCAGGCCCGG
GAGGACGCCCTTCGCGCGGCAGAAGCTAGCGCTCTCGGCAAGCTTGCCGG
TATCAGCGCCGCGAGGGACGTGGACATTGACCTACTCCGAATGCTCCTTC
GGCTGCTGATCACGAGGGCGAAAGCGCTTGGTCTGCGTGAACCGAGTGGC
GACAGCGATAGCGTTAGCCGAGGCGTAGACGAGGAAGGCGAGGATGGCAC
GATGGGGGAGGTGAGGGTTGCGACGGGGCGGATGTTTACTTATTTAGGAA
TCTGACAACCTCGACGTCGACATCGCTGTCTGGGTTTATAACCCCAACGC
CTATGATAGGTATAGCTTTGCTGTGTACCTTGGAAGTGTACTTTTCGTTC
GTCTTCTAGTGCTACTGCCTCAAAACGCATGGACCTTGGCTGCAGCGCGC
CAAGTAAATTTCAGACGATGGAGTTTTGTGTTGGGGTTCGAGTGGTCACG
GAAACATGGATGCGACATGAGGTCGTGACGGCATCATATTGCCACTCCCC
TGGAGGGGAACGGTCTGTGTCAGGCGAGATTGCAATACTGTGACACGGAG
TTTGTTGAGATAAGCAACTGTCCCTTCCGAGACCTTACCGTGCAATGACC
TTGAGACCGGCCTAGAGATGAGTACGACGCTGACAGTTCACTCGGGAGAG
AGAAATAGCGCTCCTGGGCAGACACAAGGGAATAGTGTGAGCGTGTGACA
GCACAAAGGGAGGGTATCCCCATGAGCCACAACATGTATTTGCCATCTGC
CATCTTTGGGCACAAGAGGAGGGGCACGTAATGCCAAGACTAAGACCGCA
GTTGTAAAACGAGTGCGATCTCCCGTGATTATACAAGACGTAACGTTTGA
ATGTGCTTTGGAGTTATGTTTACCTCTTGACATTCGAGATTGCTACGCCG
TTACGCAAGGCTGTTCAGCCTCGACGGATGGTATTGGAGCCCTGGATAAC
ATCGCAACAACGAACACCCGTGAGGTCACTCCCCGCCTAAGTACCCATGT
TGAAGCCCGTCGGTGGCAAGCTCAAAGAAAGAGAGGTCTAGCGGAAGAAC
AAGAAACTAGAGTTAAGAAACATCGGTGGGTCCTACACTAAATTTTCCGG
GTTGCAACAACCTGTACCCGACGGCGGTGCCGAACTAAGAAGTTTAGACT
CGGACCGAATCTGGCCTTTTCTTTACTGCGGGTCTGCTCTATGAACGCGT
CTCTCATGTATAGCGGAAGTGCTCATGTGGTCTGCTCTCTGGTCTATTTA
CAGAAGGTGCCAAGTCCACGTCCGACCATTCCGAGAGCCCGCGCGCCATG
ACGCTACAACTAACGACGTGACAACAATGACCCACCGTCATGCGCTGCTG
CAGGGCTTGTTCCTGCGTCAACAGTGGGAAAACCTGTACGCTCTCATGCA
CCACCGGGAGGCCATGGCTCCGGATTGGATCTCAGTCGTACGGTAAGGCA
TCATCACACTCTCTTTCTCTAAACGTCCCGGCTCAACACCTAGTTGTGTG
AACGTACATCACCAGCACGTTTTCTCGACAAGAAGCGGCTTTGAATCACG
GTTTAGACCTGCCATCCCTTAGGTCTGCGCCTTTAACTCAATCTCGTTCT
CGGTGCGTCCTTAGGGAAGCGGGGGAGGATTTGCTGCAACTTTTGCCGGA
GTGGGTCCGCTTCGACGTGGAGGAAGTGGTGCAGCTGGCCTGCCGAGTCA
ACGTGAACGCCCACGGCTTGAGGGACGACTCGGGCGCGAATCTCGTGATC
GGCGTGGGGATGTTCCCGCTGACGGCCATGATTAATCATGCGTGCAGGCC
TAACTGCACGTTCGTGTACTTCGGTGAGACGCCGCTTCTGCCCTGTGGCA
CGTTTTTCGGAGTTGACCTGTAAATTAGAGGTTTGCCGTGCCTATTTGCC
GTGCCTACGTTAGTTCGACGCCTGCTTCTTGCTCCGTAACAAAGCGCGGT
GGAAGGATGAGCCGCAATGGTGGAAACTTGCTCCTCCTGTCACTCGTTGC
TTCGGACACGACACCAAGGTGGAAATCTGGAGGTCCGCACGCTGGAGCCG
GTGTCTGCCGGGGCAGAGCTAAGCGTGTACTACATCGACCTGCTTCAAAG
CACCGCCGCGAGACGGCAAGAGCTTCTCACGTCGAAGCACTTCCTGTGCA
AATGCTCCAGGTGACATTAATGCGATGGAGCCCAACTCCCTGCCTCTCTG
TCTGTCTGTCTCGCGCTCTCTCCCCCGCCCTGTCTCTGTATGTCTCTCTC
TTTGGTACTTTTTATGGCGGTTTGCGAGCGGGGTGGCATCGAGGCTGCAT
GCATTGTCCCTTTTCCGCTGCGGCCGTCAGTCACCATTCGAACCCGTCAC
ACATCCCAGATTATGGGAAGAACGTTATTACAGACGAAGCCTGCCAGCTG
CTTGGAATCTGTTCTGGATGTTTCCCCATGTGAAACCTTGCTTTCCACCG
CGCTCCCCTCCCGAGACTTAAACGGTACCTTGTGGAAACATGGATTGCAA
CACCTAACACCTTGCTTGGTTCGGGCACGCTTGTCTCTGTGTTTTCTTAT
CTTCTTACTTCCAGGTGCGAGAATCCCTCGAGTATGGACGACTACCTCGA
TGGAGTGTGTTGCACCGACTGCGGAGAGAGGGGCTGCCTCACGCCCACGT
AAGTAAGACAGGAGCCGTGATGTGGAAGGTTGTGGGATGAACCAGTGGGA
AAGGGGAGAAGGCAAAGGTGTTGTAGGGAAGTGTGAGCGGGACCACCAAC
GGCGAGGCTTGGGGGTCGAAAGAGCCACTAGCTGGCAGAACGAAATGGGG
TTGGATCTGGATCGTGTGGGGCCGGTTAAGCGCTGCAAAAGGAGGTGACT
ACTAGCTTCAGCCCCCCCGTACCTCTTATTTTTCGCCTTACACACCTTCA
CGGTACACTACAACCGACCCATCTCCCGTTCGACTGGGCACCCCTGTTGC
GTGCACTGAGCTGAACCCTCACCACGATTTTACGTCTCGAGTTCCGAGCG
CGTTCCTCCGAAGCCTGCCTACCTTCGTACCTTTTCGAAACGGTTCACCT
ACTGTAGCATGCGCTAGGATCCACCGCCGTACCTACCCGCCGGAGTTAGT
TATTGATTTTTTTTCCACCAATCAAAAGTTTTCCCTTTTCTTGTCGTCGT
GGCAGCCCCCCGCCAAGCGCGGAAGACATCCTGGCGGCCCAATTGGCACA
ACTCGGCGAGGGCTTGGCCGACGAGTCCGCGGCTAACGGGAGCGGTAAGG
GCATGGGCAAGAAAAAGGGCGGCGGCGGTGGTAGTACCACTTCGCGTCGT
GAAACTTCAGTCAATCCCTCCGCCGCCTTGGGCGCGAAGGACGGCAGTGG
GAACGGTAGCAGGGCTGGTGGCGTCCGTGGCGGAAGTGAGAGCGTGGTGC
AGAAGGTGTACTGCTCTGCGTGTGGGCGGGAGTACCCGGGCACGGCGGTC
GAGGAGAGCGTGGCACGAGCTAAGGCCTTATGGTGTGGCGGACAGACAGA
CCCCCGTGTTCTGTGTGCCTAGGATATTTTCACAGGAAATTTTTTTTTGC
TGGAGCCCAGCACAGACGGGGGAAGACTGTCAGGGCACGTACTTATGGTG
TGATGACCAGTGTAGGTGCTGTCTTTAGCCCACTCCCGAGGCTGAAAGCT
TCCACTCGCTGTGGCGCTGCGCGAACACGTTGGCCTCGGCTTGAGACCGG
TTGAAAAATGCTAGGCAGAAGTCGACAACCAGCCCTCAGGAGGGTCTAGG
GCTGACGTGTGAATCGCGCCTTACCCTTGGCGACCAACCTTTCGTTCTCC
ACCACGTCCAGTTTGAACCATTCTGATCAAACCCTTTTGTGTATCATACA
ACTTGACCCGGGTAATAACCCCGTCCGCCAAAGCCTTTGTAGCGGCCCTT
CGTAGCCTACCAGGTAGGAGCTAAGCCCCCCATCCTCGGAGCCCTGGCCA
AGTCCCCTTCCGTGACCGCCTTGGCTTCGTCTGGTGCTTGCCCGCGTGTC
GTTCCCCTCCCGGCCCTCCCCGCAGGGATGCCGCTATGGCGGTCGTTAGA
GCGAAAAGTTTTTCTTTGGCCAGAAAGTCTCTTGAAAAGTGGCTCCAGGA
CTACGATGCAGGTGAGGGGCTAGCCTAGCCCCAACGTATGAGAGGCAGTG
GAGCCTGGAGGGACGATTTTTGCTCGCCGGCTTAGGGAATGGTCCCCATC
CCACCATACCGTAACCCCTTTGTCGTGGCGGTTGCTTCGTCTGTTGGAAG
TCAGTCGCATGAGTCTTAAGCCCCTCCCAGTGCCATCGTATTGCGGATGT
CTAGTATTCGGCCCGAAGTGTCGGGAGATGAATTTACACAGCATTCATAA
TGTTTCGATGTCGACCTCGCTCTTGCCAGTATCGGTTGTGGTTAGGGTTA
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGCTCACCCTTGCCAGTGTTG
GTGGGCGGGAGCGTTTCAAGACTTGACCCACCTGTGGCTGGCGTAGAGCC
AAGCTCTTCTATTATAGTAGTGACAAGTTCTCCATCCACACCCTGGAGTT
GTTTGACTGCACGACTGGATGGGAGCGTATTCCATGTTGCGAGTGCCCTC
CCACTCCGTTACTTGAGCACGTTTGGAGGAGCAACACAGCAGTGCTACCG
ACTATGCCGTAAGTTTTTTTTTGTTTTTTTGGCAGGTGCTGTTCTGCCGC
CAACCGCGACCAAGAAAAAGTCGGTCAAGAAGGATAGGTTGAAGCTCCAC
CCGGCGAACGTCATGGTTGTGCAAACCCTCGTGCCGCTGTCGAACTGCTG
CACCTTCGAGGAAGATCACGCGGCTAGTGCAAGGTCGGTGGCGATAGTTT
GCTGAACCAACCGGGCGCAAGCGGTTTCGTCCCCGAGTGTGTGCGCTTGT
TTTTGTTTTTTGCATCGACCGCGCTAACCGGCTGACCAATGAAAATACGT
CAGTCTTGAGGCGGATACAAAAAAACGCAACCACGCCTTACTTTCAAAGG
GTTCTACCGAGAGCGTATGTGTGTTGCTTGTGTGTTTTCGTCCGATCTGT
TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGG
CTCCAGTCTACGCCTTTCGGTAATTGTTTTGGACGCACAGCAGTAAAGGC
CGGAAATCACACAGGAGGAAGGCGATTTTTCTCTCCCTACACACATGCGG
TGGTTGCTTTCAGTTTTTGGCGCTATTATTATTAAAGGGTTCACCGTTCA
ACAGGTCCTTAACTCGGTTTGTGTTTACTCACGACTAAGCGGTTTCCGTT
CCCTCATGTGGCAATTCTGAGTTTTCACTCCGGAGAGATACAAAGCCCAA
CCAAAATGTCGAGAGTGATGGGATAAAGATAAGGATACGAGGCTCCCCAC
CGAACCGCCGGGGAGTGAGCGGTGCATTTAAACATTCAAACCTTTGGGTA
TTTTACATACCCACCGTCCATCCCGAACCAATGACACGCACAAGAACCCG
CAAGGGCTTTTAAGTCCAAGTTCAAAGTAGCCGATCCAAGTTCGCGAGAG
TGAATCGCCCCTCTGCGCGCAGGAGGCCACCGAGCTTGGTGCTGCCGCGA
GAGTCAGCAAGCACGATATAGGGAAAAAAACAGTCGCGACAACCATGTAC
GAACAGCTTTCGGCAGTCTTATCCTCTTCTCCGCGCGGCACCAGGCACTT
GCGACGGGCTGTGTCGGCTATGGAGGCGGTGTACCCGGCCAATTTCCCCG
AGCTCGGAGACTTTCACGCCGCACTGGCAGACGCGAACGACGCCTTGCTA
CAGAAACGCGGCCAAACCTTGCCCAAGAAGTCGAGGAGCCAGGCGGTTAG
GTGAGGGGAGTCGTTCTGCACACTTGCTTGTCGCAGGTGGATGAGAGTAA
TCCGCTGCTCAAGAAGTTGTTGTTGCGTGTTGTAAGGTAGATGTGATTCT
CTAGGTTGGATTTTGTGTGGTGATGGGACCACCCCCCACCGACATGCACA
CAGCCACTTACACACACATTTCACATTTCCCTGTGTGATTTCGAAGAGGG
GTAGCGCTGTTGTCCGAGAAACCGCGTGCCCTGTGTGTTCATCCTCCTCG
ATTCTCGTGAGGTTAAAGAACCAAGGCACGCCTTTTTTGTGCACGCCCTT
GTGCCTGCCTATCGTACCATGGAACCGTGTCCTACCCGCTGCTTTGGCCG
CGAACCTGCTGAACGACTGTTATTGCTCTTGCCGTGCTACTCACCCTTTC
AAGGACTACTAATTCCTTCCTTTCAGGGCCGCTCTCCCCACCATAGGTCC
TCGTAAGCAACCACGTGTCAACGCCAATCGTTTTTTTCGGTTGGTTTTAC
AAGCACACACACACACACACACACACACACACACGTCTTTTCATTTGTCA
GCCGGTTAGCGCGGTCGATGCTAATAATGTTACCCGCAGGGGAGATGTCC
CTATTTGCTGTCTGGGAAATCGTAGACATACAGGTACTTTCTGACGCTAT
GAATCCATTGCTAATCTGTCTCAGACTCTTTTCTATGATAGAGATGGTTT
CGTTGTGTCATATTAAGAAAAAAAAAAAACACACACACACACACACGCAT
ATTCACCACCGCAGGACAAAAGTCTGACGCCTGTTCAATGGCCAGGCGGT
TAGCGCTGTCCATGCTAAGTCAAGTTACACACACACTCACAGGTGCTGGA
GTCTTGAGAGCGCAAATATTAGATGGCGTGTTGTTGATCTCACCGAGTGC
GGCAGCAGTGCCTAATGTCTTTACACTCCCGCCATCCACACCCTGCCCGT
GGCCACTACTGGTGATTCTCGCTCAAGCAGCGAACGAAAGCAGGCGCTGG
AGAGAGCGGCGACGATTAGATCGGTCTGTTTGGGAAAAGACCACCCAGCC
ACGAGAGAAGCAGCTAGAGCGTTGGATCGAGTCACCGGGTGACGGTATGA
CGCGCACTCGTGATGGTGACTACAGTTGTTGGGTGGAGAGCAACCACGAC
CTTGACATACAACCTGGTACGGGAGTAATGCACAACGCTCAGAGGGAGAG
ACTTGACAAAAGTGCAGCATGACGAAAGTGCGGCATGATGTACTTGTTGC
TTGTTCCTTCCTTTTGGTGCCTCATGGAGTTGGCCAGACTTCGGCGATAG
CGTTATGGTTCTGTGGGGTCGTCGGGTTGCGCGTAGCACTTCTCTGATTG
GTTGGCGAATTTTCCGTCGTAGATGAGGTTCTTCGTGTTCGCTGATTGGT
TGGACTATTCACCGTCGTAGATGGGGTGCTTCGTGCTCGCTGATTGCTCG
GAATTTTCACGATCGTAGATGAGGTGCTTCGTGCGCGCTGATTGGTAGGA
GTAACTCCGTCGTAGATGAGGTGCTTCCTTCGCGCCGGTGCGGGCCGAAA
CGGCCAGAACAACGGCGTCGGCGACGGCCATTGCTTTGCTTCTCTCGCGC
CAATATTTCCGAACGGTACACTTTGGGGTTGTTGTGTGCCAGTTGTACGT
CGGCAGCAGCAGCAGTCGGTGCGGCGGAAGAAAGAGCCCGGTCTCCTTCC
TTCTGCCTGCTTCGCATATTGGCTCAAGCCAGTCGAGAACGCAGTGGTAA
AATGTTGGCGTTTTTCTTCGGTGTCACGGAGGTTGTAGCAGATCAAGGCT
TGGTTGCCGAAAAAAGGTACGAGAGGCTTCTTGTTAGGGCCCCTGGATAT
GAATGAACGACGATTGTGACAAGCTGCCTCAAGCATGGACTGTTCTTGTT
GCTATTCTCGTAACCATCAGTCTATCGTAGCGACGTTGGTAGCGATTCAC
GGAGAATGGGCAAACGAGATACAAAGTAGTACTTCATACATGCCCCGGTG
GTTCTCCACCAGGTACCTCCTGAGGCTTCCACAACTGAGCTAAGCCCCGG
AGCTCCGTTGCTGCCGGCAGACATGGAACGAGAACCAACCAATCTTCGGC
AACGATAACGCGACATTTTCGGTCTCCTCTTGCTCATTGATTGGCTTAGC
CACCCTCGCAACACCCTTGGGATGCAAACCTGGAGCCCTATCCTATCCTA
CGACGTTCCTTCCAAAACGGAAATAGTCGAGTCTTTCCACCTTGGTTTGG
CCACTACAGCAGCAGTACAGCATGGTGGCGGGGTCAAATGAGCCGTTGAA
ACCGCGCCTTCGTCCGGAGGGGAGGTTTACCCCCTCAACCACATTGTTAT
AATAGGTGGTCTGTACCGCGTTGCACCGCTCTGGGCGGTTAAGTTACTTG
GGTGGCTCGCTTGCCAGGGAAACCTCTTCTTTGATAAAAAAGTTCATTTA
GCTGCTGAGCGAGCCGGCGTGCGACTCAACCTGTCAACCTGACGCTCACG
GACCTCCACCAACACGTACATTCCTGGGGTACATGCAGCTTTTCCTTTTT
CCACACTTCAAGACGACAAAACAACACAACATAGAATACGACAACGACGC
GCAGATTGACCATAAAAAACACTTGGGGCACTTGTGTTCCAGTAAGACAA
ACGCGGTCACCACACAAATAAATACCAAGTCATCGCGCAAGTAAATACCA
TGGTACGAACCAAAAATCGTGCAATACCAAACAAAAAGCTGTCGCCGCCG
AATCAACCTGCTGCAACACCGACGCACGATGGACGGCACACGCAACCAGA
CCACAAGGATGCGGCGCGGCCGTGCTTGCTTGAGACCACGCCAACTTGTC
ATGAAGCACAATGCACGCAAAGAGCACTCGGCACGCAACCTTAGCGAATA
AAAATCAAGAGAGTTCGAGGAAGAAAGAAGGAAGGAAGCCACTCCGGGCC
AAGGTCTGCAAGGGATACATGCCTGCAGCGACAGCCCCGAACGCCTCCTT
CTTTTTCGTGACACAGAAAGAGCGTTGGTTTTCTCGGCCGTTACAAAGCT
GGAGTTTGCTTCGACGTGACCTCCGAAAAAGAAGGAGGAACACGCGGAAA
CACTACTGGACTACAGCAGTTTACCTTGCGAGAGGCGTCTACAAGACAGT
CACGGTCCCAAGCGTGCTGACACAACAAAAATACAGAAGGACGGAGTCGC
CTCCCGCACGAAAAAAAGGCGGGGGGGGGGATGCGAAACAAAGAACAATA
TCGGGACGCACCTTCGAGAGCGGTTCGAAGAAGAACCATCTACCGAATAG
AGGCCCAGAGCGTTTAATAACGTGAACAAGATGGACAACGACGACGAATA
TCCACAACAACAATTCATCACAGAAGAAACAGGGTTCGGAACATGTTACA
CATCGCACATCGAATTCGACAACGGACGCCGGGCACAAAATTGGGGGGGT
ACATGAGGAATAGAAATCCCCATGTCACGCGCCTACAGGAGAAATGGCAC
ACCAAATGAGTAAGAACATGTCTATTTCCATGACGAAACAGAAAGAACAG
GCAAGATGACACTCCCCCAAAAACAGAGAGCACAAAACACGGCCCACACA
CGGACTACCGCCGTATAGGCGAGTCAGTTGCTCAGCAAACCCGTCGCATT
CTTCCAAGCACCCGCACGTCTACGCACGACATTACCGTCTTGCGTGGCAC
ATGACACGTCGGGGAAGCAGACCACAACCGCCTAGCACCGCAATCTGTGA
CTTCACCACCTACTCCGAGTATTTAACACCGCCTGGATGTAGGAACATCG
TTTCATCGCCAGAATGACCATCCTCGGGGTGGCGTACCTACGGACGTGTG
CAGGCAAAACGCCAACCTCCCGGTAAAAATACATGAGGCCTTCACCCCGC
TACCACTCATCAACTGTAAACATTAGCCGGGGGGGGGGGCATAGGGACTG
CGCCCTTCCAAAACAACAGCATCCACATTAACATGAAGCATCACATATAA
ATCACCACAAAACCAGCGAACCATCGGCCGAAATGCCTTTTCAAAACAAA
AACGCTCGCCCGCAACGATATCATGCAAACCAGCGGCACCAAAAATCCGC
AGATCAGATAGCAATCTTCCCAGAGATACGACAAAGGTGGACAAGAAATT
CACAGAGAAAGAAAATAGAATCAACTCGTGCCGCAACGCTCAGAGCGTCC
ACACGCTGGTACTACTTGGACCGTTTCGGCTGCCAGTCTCACACTCTGCT
TTCTTCCTGATACGGACGAACAAAACGCCTTCTGATTTCCACGGCAGTCG
AAAATGTGATCACCAAGACAAATACAATACGCAGACTATCCAGCATCCTG
CAGAGTGTAGACAAAGAAAAGGCAAGTACAATGACAGCGTCACCACGCAC
CTGTTTCTCGACTTGCACCTACCTCAACTTCAAACTTACCGCCACGGGCG
CTGTCATCGCCGCGACATCTGTCAACCTGACAACAGTGACGTCATTGTTG
TTCTTCAACCTTCAACAGCGGAAAGGTTCCCTCACGGAACGCGCGATCCA
TGAACCACGCGCCGCTCGACACCAACACACCAAAACCAACGCCAACGAAG
TACAGCGTGTCATCACGTCTACGACATCTACGACATGTACGATTTTTCAA
TTCGACCTACACCACTTCACCCTTCATCAGTATTCTAGCGCTGCTTGGGT
GTTGCAGAACGCGGACAGCTGGCACTTCCGGCGCAAAATGCGACCTCTCA
CGCAACATACTACTAGACATCGAATCATCTATGTGATCAATTGGTAAACA
TGAAGTTTACGTGTTGGTGGAATAGACCCGCAACGCACGACACCAAACCC
CAACCATGCAAAAAAGGAGGGGGGCTATTTAAGAAACGAAAAGAAATAAA
AACATCTATCCCAATAAGGCTATTGGTCGGGGTCAGCAGTCACGCTTGCC
TACAACTCTACATTAGCCACACACAAGTTCTGCCACCCCCTTGATCCATT
CGGTCTTTGTCCCGCCGACAATGCTTGAGCTTTCACACTTTCCTCTCTTC
AACGATAGCACTGAAAACAGAGCCGAGACTTGCAGCAGACTTAGACCATT
CACCAGCATCACATATCGTCAACTTTGCCAAACTCTCTATTAAACAGTCA
CCACCGACATCACTGTTTGACTCGCTCATCCGCTGCCATGATCCATTCAC
GATCCCTATCGCTATCATCGCTTTTCTCATGCCTCCCCTACGGCAAGACA
AGCCAACAGGACACACGGAAGGACGAGGTTGTCCACCTGAAAACGCCAAT
CGAT
back to top

Coding sequence (CDS) from alignment at chr_00:1559114..1571917-

>Ec-00_001310.3 ID=Ec-00_001310.3|Name=Ec-00_001310.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1542bp|location=Sequence derived from alignment at chr_00:1559114..1571917- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGATCCCCACATCGAAAGACGAAGACCTCCTCGACGATGAGCAAGC
CCCTGCTGTCGCTGCTGCGCAAGACCAAGAGCTTGTGGCAGGTAGTGATG
CAGGAACGGTTGCTCCGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAAAAG
AAGTCTCCGCAGCAAAACAACCAGCTCGCGCAAGTCCAGGTCTACGAGAC
GATCAAGGACCTGGACACCTTCAAGGTCACCGAGGACAGCGTTTCTGGTC
GATGTGTGATTGCCTCCAGGGACCTCAAGGCGGGGGAATTGGTCCTGCGC
GAACCTCCGTTCGTCAAGGTTGTGCGTCGCGACTGTGCTTCCCGGCAGTG
TGCCTACTGCTGTCAGCAAGTCACCGAGCGGGGAAAGATCGAAGCAGACG
TGCCGTTCGCGGTCTACTGCAGTCGCGCATGCCAGGCCCGGGAGGACGCC
CTTCGCGCGGCAGAAGCTAGCGCTCTCGGCAAGCTTGCCGGTATCAGCGC
CGCGAGGGACGTGGACATTGACCTACTCCGAATGCTCCTTCGGCTGCTGA
TCACGAGGGCGAAAGCGCTTGGTCTGCGTGAACCGAGTGGCGACAGCGAT
AGCGTTAGCCGAGGCGTAGACGAGGAAGGCGAGGATGGCACGATGGGGGA
GGGCTTGTTCCTGCGTCAACAGTGGGAAAACCTGTACGCTCTCATGCACC
ACCGGGAGGCCATGGCTCCGGATTGGATCTCAGTCGTACGGGAAGCGGGG
GAGGATTTGCTGCAACTTTTGCCGGAGTGGGTCCGCTTCGACGTGGAGGA
AGTGGTGCAGCTGGCCTGCCGAGTCAACGTGAACGCCCACGGCTTGAGGG
ACGACTCGGGCGCGAATCTCGTGATCGGCGTGGGGATGTTCCCGCTGACG
GCCATGATTAATCATGCGTGCAGGCCTAACTGCACGTTCGTGTACTTCGG
TGGAAATCTGGAGGTCCGCACGCTGGAGCCGGTGTCTGCCGGGGCAGAGC
TAAGCGTGTACTACATCGACCTGCTTCAAAGCACCGCCGCGAGACGGCAA
GAGCTTCTCACGTCGAAGCACTTCCTGTGCAAATGCTCCAGGTGCGAGAA
TCCCTCGAGTATGGACGACTACCTCGATGGAGTGTGTTGCACCGACTGCG
GAGAGAGGGGCTGCCTCACGCCCACCCCCCCGCCAAGCGCGGAAGACATC
CTGGCGGCCCAATTGGCACAACTCGGCGAGGGCTTGGCCGACGAGTCCGC
GGCTAACGGGAGCGGTAAGGGCATGGGCAAGAAAAAGGGCGGCGGCGGTG
GTAGTACCACTTCGCGTCGTGAAACTTCAGTCAATCCCTCCGCCGCCTTG
GGCGCGAAGGACGGCAGTGGGAACGGTAGCAGGGCTGGTGGCGTCCGTGG
CGGAAGTGAGAGCGTGGTGCAGAAGGTGTACTGCTCTGCGTGTGGGCGGG
AGTACCCGGGCACGGCGGTCGAGGAGAGCGTGGCACGAGCTAAGGCCTTA
TGGTGTGGCGGACAGACAGACCCCCGTGTTCTGTGTGCCTAG
back to top
Synonyms
The feature 'Ec-00_001310.3' has the following synonyms
Synonym
Esi0013_0081
Esi_0013_0081