Ec-00_001220.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001220.1
Unique NameEc-00_001220.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length848
Homology
BLAST of Ec-00_001220.1 vs. uniprot
Match: D8LE78_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE78_ECTSI)

HSP 1 Score: 1578 bits (4086), Expect = 0.000e+0
Identity = 847/847 (100.00%), Postives = 847/847 (100.00%), Query Frame = 1
Query:    1 MKPAEGLLTTASGRLVVRPTAGGGGGSGVCGREADRGNESSRAGGGDKGAAPSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGGGSATADALPRPHSSGSASNPTPDHRSRDLEHRCYSAAGLGHQQFEDLNDPTSCRQPVYTSGADSSDRDLLRSTSEQDRRGLYARGGELHNTKATPPQSTVEEDVISPASSASAPVQGRHGSLFDGLQVYVVGGRQPLGSQHSCAAPGNVSALARVPVSARTMVLDSHRLSTASHXXXXXXXXXXXXQNYYPSNQHTSYNSSLSTASFEGLDPNWRDNVLSAPSTVAPSPPTPVLPPEDDRRPSCDSTPLLSAVPSTATTNIGDGTSVVGVPGSARALARMIHFNSTNGRDENEISRRVLGRGTSRSGATAGQEAVEIEESEKEGWGGENSRFSC 2541
            MKPAEGLLTTASGRLVVRPTAGGGGGSGVCGREADRGNESSRAGGGDKGAAPSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGGGSATADALPRPHSSGSASNPTPDHRSRDLEHRCYSAAGLGHQQFEDLNDPTSCRQPVYTSGADSSDRDLLRSTSEQDRRGLYARGGELHNTKATPPQSTVEEDVISPASSASAPVQGRHGSLFDGLQVYVVGGRQPLGSQHSCAAPGNVSALARVPVSARTMVLDSHRLSTASHXXXXXXXXXXXXQNYYPSNQHTSYNSSLSTASFEGLDPNWRDNVLSAPSTVAPSPPTPVLPPEDDRRPSCDSTPLLSAVPSTATTNIGDGTSVVGVPGSARALARMIHFNSTNGRDENEISRRVLGRGTSRSGATAGQEAVEIEESEKEGWGGENSRFSC
Sbjct:    1 MKPAEGLLTTASGRLVVRPTAGGGGGSGVCGREADRGNESSRAGGGDKGAAPSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGGGSATADALPRPHSSGSASNPTPDHRSRDLEHRCYSAAGLGHQQFEDLNDPTSCRQPVYTSGADSSDRDLLRSTSEQDRRGLYARGGELHNTKATPPQSTVEEDVISPASSASAPVQGRHGSLFDGLQVYVVGGRQPLGSQHSCAAPGNVSALARVPVSARTMVLDSHRLSTASHXXXXXXXXXXXXQNYYPSNQHTSYNSSLSTASFEGLDPNWRDNVLSAPSTVAPSPPTPVLPPEDDRRPSCDSTPLLSAVPSTATTNIGDGTSVVGVPGSARALARMIHFNSTNGRDENEISRRVLGRGTSRSGATAGQEAVEIEESEKEGWGGENSRFSC 847          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A6H5L0C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C2_9PHAE)

HSP 1 Score: 1304 bits (3374), Expect = 0.000e+0
Identity = 750/965 (77.72%), Postives = 775/965 (80.31%), Query Frame = 1
Query:    1 MKPAEGLLTTASGRLVVRPTAGGGGGSGVCGREADRGNESSRAGGGDKGAAPSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGGGSATADALPRPHSSGSASNP--TPDHRSRDLEHRCYSAAGLGHQQFEDLNDPTSCRQPVYTSGADSSDRDLLRSTSEQDRR--------------------------GLYARGGELHNTKATPPQSTVEEDVISPASSASAPVQGRHGSLFDGLQVYVVGGRQPLGSQHSCAAPGNVSA-LARVPVSARTMVLDSHRLSTASHXXXXXXXXXXXXQNYYPSNQHTSYNSSLSTASFEGLDPNWRDNVLSAPSTVAPSPPTPVLPPEDDRRPSCDSTPLLSAVPSTATTNIGDGTSVVGVPGSARALARMIHFNSTNGRDENEI---------------------------------------------------------------------------------------------------SRRVLGRGTSRSGATAGQEAVEIEESEKEG 2511
            +KPAEGLLTTASG LVVRPT GGGGGSGVC R ADRGNESSRAGGGDK AAPS+PM RL AAWPLTFIWVDPERDLKR PPREI+VEEI+DLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGG V+ AGDAVAPLLPHRF PEPAAS AGPDLEE++S ERL D+DH+VDS VG QRQSDRAATALNTEVSRHE+SLRSDADLSSE PKV GEGG WSVDTIHAWRRRLFPAV+RGDIAAVLAIFDQGCPVDIAQTGTGDTPML+ACRLGDVGMVRECLRRGSRNDPHPAFGQTAL AAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXX  VVLEE NARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGG S T+D LPRPHSSGSA NP  TPDHRSRDLEHRCYSAAGLGHQQFEDLN PT CRQPVYTSG DS DRDLLRSTS+ DRR                          GLYA GGEL  TKATPPQST +  V SPA S SAPVQG HGSLFDGLQVYVVGGRQPLGSQHSCAAPG +SA LARVPVSARTMVLDSHRLSTASHXXXXXXXXXXXX    PSNQ +SYNSSLSTASFEGLDPNWRDN+LSAPSTVAPSPPTP+  PE DRRP+ DST LLSAVPSTATT  GDGT +VGV GSARALARMIHFN+T  R E+EI                                                                                                   ++ VLGRGTSRSGATAGQEAVE EESEKEG
Sbjct:  103 VKPAEGLLTTASGHLVVRPTVGGGGGSGVCERGADRGNESSRAGGGDKIAAPSMPMRRLRAAWPLTFIWVDPERDLKRSPPREILVEEIMDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGSVKTAGDAVAPLLPHRFRPEPAASLAGPDLEESVSAERLNDIDHKVDSHVGVQRQSDRAATALNTEVSRHELSLRSDADLSSEKPKVLGEGGTWSVDTIHAWRRRLFPAVKRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLVACRLGDVGMVRECLRRGSRNDPHPAFGQTALHAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXGDVVLEESNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGDAQFQAHRRANEGGRSVTSDTLPRPHSSGSAPNPPGTPDHRSRDLEHRCYSAAGLGHQQFEDLNAPTCCRQPVYTSGGDSFDRDLLRSTSQHDRRQDLHIIDACRSKGVVFFCQIPHLYSIGLYASGGELKITKATPPQSTFDGHVTSPAFSTSAPVQGTHGSLFDGLQVYVVGGRQPLGSQHSCAAPGKMSASLARVPVSARTMVLDSHRLSTASHXXXXXXXXXXXXXXXXPSNQQSSYNSSLSTASFEGLDPNWRDNILSAPSTVAPSPPTPISTPEGDRRPNRDSTSLLSAVPSTATTTGGDGTGIVGVMGSARALARMIHFNNTIDRGESEIFSGGAAVSPSATRTQNLTEKETEEPHGGTAASEKSGGGERTTKPIGCWMTSVDDDQDSSGTSSRAPEVGGKGHGCGAEQTSMSDSPHADAAESFGSHVDTKPVLGRGTSRSGATAGQEAVEFEESEKEG 1067          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A836CAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX5_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.370e-50
Identity = 189/559 (33.81%), Postives = 241/559 (43.11%), Query Frame = 1
Query:    1 MKPAEGLLTTASGRLVVRPTAGGGGGSGVCGRE------ADRGNESSRAGGGDKGAAPSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPAFWQQ-ASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVG----------------------------------------------------------MVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXX--VVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPA 1476
            + PA+GL+    GR V+ P     G   +C  +         G + SR      GAA  I       A PLT +W DP++ ++R PPRE+++ ++  +  GHKT AFWQ  A   G   LP   LC SL+  DR+LD+AA +  +AR W  A A V                                     +  + +GE            +GG                         A+L+ +                  WR+RLF AV  GD  AV A FD GC VD+A+ G+ DT +L ACRLG+V                                                           + R  L RG++NDPHP FGQTALQAAVA+G   CARLILETAAPS +DAVV+NH+DPN+ETPLHVA RRG       LL HGAD    D  G XXXXXXXXXXXXXX             +LE  +AR                       AA  D  +  G+TP+ALA   GH A+ RLI++YAPA
Sbjct:  396 LMPADGLVLNRRGRAVL-PGMNAEGAPPLCRAQHPLPQLIPYGAQPSRKTQAAAGAAARI-------ALPLTLVWFDPDKSVRRAPPRELLLGDVRSVTAGHKTAAFWQHIALGAGTAGLPPAALCLSLIAADRTLDVAAATPADARAWRDAFADV-------------------------------------VRRHRAGE------------LGGXXXXXXXXXXXXX------------AELTPD-----------------QWRQRLFLAVHAGDATAVSAAFDAGCAVDLAEAGSMDTALLSACRLGNVEERRRASILSVAAHLTSTCARRAPRHAPVRTHPNRAAPXXXXXXXXXXXXXXXTLLPRQVARVALARGAKNDPHPQFGQTALQAAVANGHLDCARLILETAAPSAADAVVANHEDPNRETPLHVAARRGDAAAAALLLRHGADPFGRDGGGGXXXXXXXXXXXXXXVATLLDATGAHDELLEAADARXXXXXXXXXXXXXXXXXXXXXXXAAAADAADGAGRTPYALAYGHGHHALARLIQEYAPA 868          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A0P1AB56_PLAHL (Ankyrin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB56_PLAHL)

HSP 1 Score: 178 bits (452), Expect = 2.880e-42
Identity = 144/408 (35.29%), Postives = 201/408 (49.26%), Query Frame = 1
Query:  244 REIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKY 1467
            R + +  + ++  GHKT AF  Q+         + + CFSL+   R+LDL A S  EAR W+ +L  +                               S +G   + +++  R I+          G ++S     A+        +S   D ++S ++          +   +  WR R+F   R   +  +L   + GCP+D+ + GTGDT ++LACR GD  +V  CL R +RNDPHP FG+TALQ AV S Q  C  L+L TAA S  D+ + NH D N + PLHVA R G    ++ LLHHGAD+  V+  G  XXXXXXXXXXXXXXXXXX      VL   +  G+ ALH AA  G+ A V LLL +AA     N  G++ + +A R        LI KY
Sbjct:  516 RSLDLALVTEICEGHKTAAFTAQSESS---VAKEEEKCFSLMMQARTLDLVAASKEEARIWISSLREL------------------------------ISASGSSNDASLASARTIE----------GFKKS-----AI--------ISKGRDGNVSGKLI-----AAPTNKRMLAGWRNRIFDLARNDRLDEILECLEDGCPIDLLEGGTGDTLLILACRRGDAELVELCLSRRARNDPHPEFGETALQVAVNSSQAHCVGLLLSTAAKSDMDSEIVNHIDSNNDAPLHVAARHGDLACLQLLLHHGADICVVEELGRTXXXXXXXXXXXXXXXXXXDVGGDSVLNSGDHDGETALHYAARSGNEAMVTLLLESAANVHAYNVQGESAYDVAVREQQRQCAELISKY 862          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A662WTT4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTT4_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.300e-42
Identity = 155/427 (36.30%), Postives = 213/427 (49.88%), Query Frame = 1
Query:  193 LTFIWVDP--ERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKY 1467
            L   W DP      ++   R + +  + ++ +GH T AF  Q     +    +   CFSL+   R+LDL A S  EA  WV +L R  L A                        PA S            + L+D    ++    G +QS  A T+ + +V        SD    + +P         S   + AWR R+F   R G +  ++  +  GCP+D+ ++G+GDT ++LACR G+  +V  CL R ++NDPHP FG+TALQ AV + Q  C +L+L TAA S  D+ + NH DPN + PLHVA   G    ++ LLHHGAD+  V+  G  XXXXXXXXXXXXXXXXXXXX    VL   +  GD ALH AA  G+ A  +LLL +AA     N   +TP+ +A R        LI KY
Sbjct:  521 LQLTWGDPTVSGSTEKRGVRSLDLSLVTEVRKGHGTKAFSAQTDSSVVR---EKDKCFSLITKTRTLDLVAASKEEAHIWVTSL-RDLLFA------------------------PATS-----------ADALLDSARTIE----GFKQS--ALTSRDPDVI-------SDDKPVAAVP---------SKRMVAAWRSRIFNLARNGRLDEIVECWQDGCPIDLLESGSGDTLLILACRQGNDQLVELCLSRRAKNDPHPEFGETALQVAVNACQPHCVKLLLSTAAKSEMDSEIVNHIDPNNDAPLHVAASHGDLACLQLLLHHGADICVVEEFGRTXXXXXXXXXXXXXXXXXXXXGGDSVLNSGDHDGDTALHYAALSGNEATAKLLLESAANVFATNIHNETPYDIAVREKQQRCAELIAKY 886          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A662XT93_9STRA (PH domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XT93_9STRA)

HSP 1 Score: 177 bits (448), Expect = 7.680e-42
Identity = 155/427 (36.30%), Postives = 211/427 (49.41%), Query Frame = 1
Query:  193 LTFIWVDPE--RDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKY 1467
            L   W DP      ++   R + +  + ++  GH T AF  Q     I    + + CFSL+   R+LDL A S  EA  WV +L R  L A                        PA S      +  +   R+I+          G +QS     AL +     +    SD    + +P         S   + AWR R+F   R G +  ++  +  GCP+D+ ++G+GDT ++LACR G+  +V  CL R ++NDPHP FG+TALQ AV + Q  C +L+L TAA S  D+ + NH DPN + PLHVA   G    ++ LLHHGAD+  V+  G  XXXXXXXXXXXXXXXXXXXX    VL   +  GD ALH AA  G+ A  +LLL +AA     N   +TP+ +A R        LI KY
Sbjct:  539 LQLTWGDPSVSGSAEKRGVRSLDLALVTEVREGHGTKAFSAQTDSSVIK---EKEKCFSLITKTRTLDLVAASKEEAHIWVSSL-RDLLFA------------------------PATS-----ADALLDSARIIE----------GFKQS-----ALTS----RDPGATSDDKPVAAVP---------SKRMVAAWRSRIFNLARNGRLDEIVECWQDGCPIDLLESGSGDTLLILACRQGNDQLVELCLSRRAKNDPHPEFGETALQVAVNACQPHCVKLLLSTAAKSDMDSEIVNHIDPNNDAPLHVAASHGDLACLQLLLHHGADICVVEEFGRTXXXXXXXXXXXXXXXXXXXXGGDSVLNSGDHEGDTALHYAALSGNEATAKLLLESAANVFATNIHSETPYDIAVREKQQKCAELIAKY 904          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A6G0M401_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M401_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.820e-41
Identity = 151/414 (36.47%), Postives = 204/414 (49.28%), Query Frame = 1
Query:  193 LTFIWVDP--ERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASR 1428
            L   W DP      +R   R + +  ++++  GH+T AF  Q      + + +   CFSLV   R+LDL A S  EAR WV +L R  L A                               P  + ++   R I+               D   +AL    S  E    S  + S+ +P         +   I  WR R+F   R   +  ++   + GCP+D+ ++GT DT ++LACRLG+  +V  CL R ++NDPHP FG+TALQ AV S    C  L+L TAA S  D+ + NH DPN + PLHVA R G    ++ LLHHGAD+  V+  G  XXXXXXXXXXXXXXXXXXXXX   VL   +  GD ALH A+  G+ A V LLL +AA     N   +T + +A R
Sbjct:  503 LQITWGDPTLSGSAERKKARSLDLALVIEIREGHRTEAFTAQTES---NIVKEKDKCFSLVTRGRTLDLVAASKEEARIWVSSL-RELLFASE-----------------------------PPTDASLMSARTIE---------------DFKQSAL----SPREQDGNSSGNPSAVVPP--------TKRMIAVWRNRIFNLARHDRLDDIMECLEDGCPIDLLESGTDDTLLMLACRLGNAELVELCLSRRAKNDPHPEFGETALQVAVNSSHAHCVGLLLSTAAKSDMDSEIVNHIDPNNDAPLHVAARHGDLACLQLLLHHGADICVVEEFGRTXXXXXXXXXXXXXXXXXXXXXGDSVLNSGDHDGDTALHYASLSGNEAIVRLLLESAANVFATNIHKETSYDIAVR 856          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A7S4V705_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V705_9STRA)

HSP 1 Score: 171 bits (434), Expect = 4.030e-40
Identity = 120/409 (29.34%), Postives = 184/409 (44.99%), Query Frame = 1
Query:  244 REIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKG-NXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNARGDRALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKY 1467
            R I + ++  +  GH T AF    +  G+ ++ + K CFSL+G DR+ D  AE+  +      AL  +     R  ++    D                                       D     Q +    ++  +T  S     L S   LS+     F +   W+ D +H  ++ LF AV+ GD+       D GCPVD  + GT DTP+L ACR G   +V   L RG++NDPHP+FGQTALQ AV++G   C ++ILETAAPS SDA++ NH+DPN E P+HVA R G   ++E L+ HGA++  VD +G                           ++E++                + C ++LL TAA+      +G TP+ +A +     + +++  Y
Sbjct:  327 RNIALADVKSIQVGHGTAAFQAYLARNGVKSISEKKYCFSLLGCDRTFDFFAETTCDVEVCTNALRGIIRQLHRSVILTQQKD---------------------------------------DGGAPNQNEKYLCSSKSST-FSAAPSFLHSGPHLSA-----FQQ---WNSD-VH--KKSLFEAVKAGDVEKFSWHLDNGCPVDFLEDGTADTPLLAACRFGQGEIVSLALARGAKNDPHPSFGQTALQTAVSAGHVNCVQMILETAAPSGSDAIIVNHEDPNGEAPIHVASRCGCLSVLELLVTHGANVSLVDHRGWTALHCAAGGGHDECLGYLLGAAGGDALVEQQXXXXXXXXXXXXXXXRLKCAQVLLETAADASATTLEGMTPYQIAKKQKLREMAKILLGY 684          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A7S1CLT8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLT8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.440e-35
Identity = 96/246 (39.02%), Postives = 118/246 (47.97%), Query Frame = 1
Query:  754 SVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGNXXXXXXXXXXXXXXXXXXXXXXXXVVLEERNA----RGDR----ALHTAAAPGHIACVELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKY 1467
            S++ I  W   LF   R   +  V A FD GCPVD+ +T TGDT +L+ACR G + +   CL+RG+RNDPHP FGQTALQ AV +       LIL TAA S +DA + NH D  K   LH+A   G    V   L HGAD   VD KG                         ++LE  +     RGD           A G  + V +LL TAA P   NA  Q P  LA   GH     L+R+Y
Sbjct:   22 SIEDIQYWSATLFDHARHNRVRDVQAAFDAGCPVDLQETATGDTALLVACRHGWLDITDLCLQRGARNDPHPHFGQTALQTAVENRHARVVELILNTAAASGADAAIVNHADDTKSASLHIAAGNGDANCVGICLDHGADQELVDGKGRTPLHVACARATAGAADTGHLDCAKLLLEYGSDVVLNRGDHDGXXXXXXXXAHGVASIVRVLLETAANPLCLNAAQQMPLQLAEGAGHRDCVDLLREY 267          
BLAST of Ec-00_001220.1 vs. uniprot
Match: A0A833TSV8_PHYIN (Formin Homology 2 Domain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TSV8_PHYIN)

HSP 1 Score: 155 bits (391), Expect = 8.250e-35
Identity = 109/336 (32.44%), Postives = 152/336 (45.24%), Query Frame = 1
Query:  193 LTFIWVDP-ERDLKRFPPREIVVEEIVDLARGHKTPAFWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVALMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVDHEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGAWSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLACRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAAPSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKG 1197
            L   W DP   + K F  R + +  + ++  GH T AF   A+    + + + + CFSLV   R+LDL A S  EA+ WV                                              N   + L   +  +D+ V   R  +    +         +S R +   SS  P       A +   I AWR R+F   R   +  +L   + GCP+D+ + GTGDT ++LACRLG+  +V  CL R ++NDPHP FG+TALQ AV S    C  L+L TAA S  D  + NH DPN + PLHVA R G    ++ LLHHGAD+  V+  G
Sbjct:  498 LQITWGDPTSAERKNF--RSVDLALVTEIREGHSTAAF---AAQTESNVVKEKEKCFSLVMRARTLDLVAASKEEAQIWV----------------------------------------------NNLRDLLFPAESSMDASVLSARTIESFKQSA--------LSSRGEEYKSSGKPTAT----APTKRMIAAWRNRIFNLARNDRLDDILESLEDGCPIDLLEGGTGDTLLMLACRLGNAELVELCLSRRAKNDPHPEFGETALQVAVNSLHAHCVGLLLSTAAKSDMDTEIVNHIDPNNDAPLHVAARHGDLACLQLLLHHGADICVVEEFG 770          
The following BLAST results are available for this feature:
BLAST of Ec-00_001220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE78_ECTSI0.000e+0100.00Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L0C2_9PHAE0.000e+077.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAX5_9STRA1.370e-5033.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0P1AB56_PLAHL2.880e-4235.29Ankyrin n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
A0A662WTT4_9STRA4.300e-4236.30Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662XT93_9STRA7.680e-4236.30PH domain-containing protein n=1 Tax=Nothophytopht... [more]
A0A6G0M401_9STRA1.820e-4136.47Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A7S4V705_9STRA4.030e-4029.34Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1CLT8_9STRA2.440e-3539.02Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A833TSV8_PHYIN8.250e-3532.44Formin Homology 2 Domain n=2 Tax=Phytophthora infe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1514650..1519460 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1592.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LE78
Length2544
Hectar predicted targeting categoryother localisation
Gene idEc-00_001220.1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001220Ec-00_001220Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1514650..1519460 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001220.1Ec-00_001220.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1514650..1519460 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001220.1.6Ec-00_001220.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1514650..1514684 -
Ec-00_001220.1.5Ec-00_001220.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1515644..1515721 -
Ec-00_001220.1.4Ec-00_001220.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1516022..1516677 -
Ec-00_001220.1.3Ec-00_001220.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1517050..1517226 -
Ec-00_001220.1.2Ec-00_001220.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1517560..1517775 -
Ec-00_001220.1.1Ec-00_001220.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1518079..1519460 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001220.1CDS:Ec-00_001220.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1514650..1514684 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001220.1 ID=Ec-00_001220.1|Name=Ec-00_001220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=848bp
MKPAEGLLTTASGRLVVRPTAGGGGGSGVCGREADRGNESSRAGGGDKGA
APSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPA
FWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVA
LMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVD
HEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGA
WSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLA
CRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAA
PSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGN
TPLHGAAGSGHAGALGSLLDAGGDVVLEERNARGDRALHTAAAPGHIACV
ELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGD
AQFQAHRRANEGGGSATADALPRPHSSGSASNPTPDHRSRDLEHRCYSAA
GLGHQQFEDLNDPTSCRQPVYTSGADSSDRDLLRSTSEQDRRGLYARGGE
LHNTKATPPQSTVEEDVISPASSASAPVQGRHGSLFDGLQVYVVGGRQPL
GSQHSCAAPGNVSALARVPVSARTMVLDSHRLSTASHHHQRREEQQQQHQ
NYYPSNQHTSYNSSLSTASFEGLDPNWRDNVLSAPSTVAPSPPTPVLPPE
DDRRPSCDSTPLLSAVPSTATTNIGDGTSVVGVPGSARALARMIHFNSTN
GRDENEISRRVLGRGTSRSGATAGQEAVEIEESEKEGWGGENSRFSC*
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spliced messenger RNA

>Ec-00_001220.1 ID=Ec-00_001220.1|Name=Ec-00_001220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2544bp|location=Sequence derived from alignment at chr_00:1514650..1519460- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAACCGGCAGAGGGACTGCTCACTACGGCAAGCGGGCGTTTGGTCGT
GCGGCCGACGGCAGGAGGAGGCGGCGGTAGCGGAGTGTGTGGGCGGGAGG
CCGACCGCGGCAACGAGTCGAGTCGCGCTGGAGGAGGTGACAAGGGCGCT
GCGCCGTCCATCCCGATGATGCGGCTGCACGCCGCTTGGCCTCTCACTTT
CATCTGGGTGGACCCCGAGAGAGACCTCAAGAGGTTTCCTCCGAGGGAGA
TAGTAGTCGAAGAGATTGTGGATCTAGCTAGGGGGCACAAAACGCCGGCG
TTCTGGCAGCAAGCTTCGCACCGCGGAATCCACACGCTCCCGGATCCGAA
GCTATGCTTCAGCCTGGTGGGGCACGACAGAAGTCTCGACCTCGCGGCCG
AGAGTCTCCCGGAGGCAAGGGAGTGGGTGTGCGCGCTTGCGAGGGTGGCG
CTGATGGCCAAGCGAGGAGGGTTGGTGGAGGCTGCTGGCGATGCTGTTGC
TCCCCTTCTTCCTCATCGCTTTTGGCCCGAGCCCGCTGCAAGCCCTGCCG
GCCCTGATCTCGAAGAAAACATGTCTGGCGAAAGGCTCATTGATGTCGAC
CACGAGGTTGACTCCCGTGTAGGAGGGCAACGGCAAAGCGATCGAGCCGC
AACCGCGCTCAACACAGAGGTTTCCCGGCATGAAGTCTCCCTTCGCTCGG
ATGCGGACCTTTCTTCGGAGATACCAAAGGTGTTCGGGGAGGGCGGAGCA
TGGTCTGTAGATACGATCCACGCCTGGCGGCGACGCCTCTTTCCGGCTGT
CAGGCGCGGAGACATTGCGGCCGTGCTTGCCATTTTCGACCAGGGCTGTC
CGGTCGACATTGCCCAGACAGGAACCGGAGACACCCCGATGCTTCTTGCC
TGCCGCCTGGGGGATGTCGGGATGGTGCGGGAATGCCTCCGCCGTGGTTC
TCGGAACGATCCGCACCCGGCCTTCGGACAGACGGCGCTTCAGGCTGCGG
TAGCCTCGGGGCAGGAGGCTTGCGCGCGGCTTATCCTCGAGACGGCCGCT
CCGAGCCGCTCCGACGCTGTGGTGTCCAACCACAAGGACCCCAACAAAGA
GACACCGCTCCATGTCGCGTGCCGCCGGGGGTATGACGGTATCGTGGAAG
CTCTGCTTCATCACGGGGCTGACTTGCGAGCTGTTGACAGAAAGGGAAAC
ACCCCGCTGCATGGGGCAGCCGGGAGTGGGCATGCCGGAGCGCTCGGGTC
TCTTCTGGACGCTGGCGGCGATGTCGTCTTGGAGGAGAGAAACGCAAGGG
GGGACAGGGCGCTACACACGGCGGCTGCCCCCGGACACATCGCCTGCGTC
GAACTATTGCTGGGTACAGCTGCCGAACCAGACGTTCCGAACGCAGATGG
TCAAACCCCGTTTGCACTGGCGTCTCGAGGCGGCCATCTTGCCGTCACGA
GGCTTATCCGGAAATATGCTCCTGCCGCGGGAACACCGTCCGGGGGAGAT
GCACAGTTTCAGGCTCATCGTCGAGCGAACGAAGGGGGGGGATCTGCCAC
GGCTGACGCACTACCACGGCCACACTCGAGCGGTTCTGCATCGAACCCGA
CGCCTGATCACCGCAGTCGAGATCTGGAACACCGCTGCTACTCGGCGGCG
GGTTTAGGCCACCAGCAGTTCGAAGACTTGAACGACCCAACGTCCTGCAG
GCAACCCGTTTACACATCTGGGGCGGATTCTTCTGATCGAGACTTGCTGC
GATCGACCAGCGAGCAAGACAGAAGAGGTCTCTACGCACGCGGTGGGGAA
CTACACAACACCAAGGCTACTCCTCCTCAGTCTACCGTCGAAGAGGACGT
CATTTCTCCGGCGTCGTCTGCCTCCGCTCCGGTTCAAGGCAGACATGGCA
GTCTCTTCGACGGCCTTCAGGTGTACGTGGTCGGGGGCAGGCAGCCGCTT
GGCTCGCAGCATTCCTGTGCTGCACCTGGAAATGTGTCAGCGTTGGCTCG
CGTGCCTGTCAGCGCCAGGACCATGGTACTCGACAGTCACCGCCTCTCGA
CGGCATCTCATCACCACCAACGGCGGGAGGAACAGCAGCAGCAGCATCAA
AACTACTACCCTTCAAACCAGCACACTTCGTACAACTCGTCGTTGTCGAC
AGCGTCCTTTGAGGGCTTGGATCCGAACTGGAGAGACAACGTCTTGAGCG
CACCTTCGACCGTGGCTCCTTCTCCTCCGACTCCAGTTTTACCTCCGGAG
GACGATCGGAGACCGAGTTGTGACTCGACGCCGCTGTTGTCCGCCGTTCC
TTCAACGGCAACCACAAACATCGGGGACGGGACCAGCGTCGTAGGTGTCC
CGGGCAGCGCCCGTGCTCTGGCACGGATGATCCACTTCAACAGTACTAAC
GGTCGGGACGAGAATGAGATCTCCAGGAGAGTCCTGGGGCGTGGGACTTC
ACGAAGTGGAGCGACCGCTGGCCAAGAAGCGGTTGAAATCGAAGAATCGG
AGAAGGAAGGTTGGGGCGGAGAGAACAGCCGCTTTTCTTGCTGA
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protein sequence of Ec-00_001220.1

>Ec-00_001220.1 ID=Ec-00_001220.1|Name=Ec-00_001220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=848bp
MKPAEGLLTTASGRLVVRPTAGGGGGSGVCGREADRGNESSRAGGGDKGA
APSIPMMRLHAAWPLTFIWVDPERDLKRFPPREIVVEEIVDLARGHKTPA
FWQQASHRGIHTLPDPKLCFSLVGHDRSLDLAAESLPEAREWVCALARVA
LMAKRGGLVEAAGDAVAPLLPHRFWPEPAASPAGPDLEENMSGERLIDVD
HEVDSRVGGQRQSDRAATALNTEVSRHEVSLRSDADLSSEIPKVFGEGGA
WSVDTIHAWRRRLFPAVRRGDIAAVLAIFDQGCPVDIAQTGTGDTPMLLA
CRLGDVGMVRECLRRGSRNDPHPAFGQTALQAAVASGQEACARLILETAA
PSRSDAVVSNHKDPNKETPLHVACRRGYDGIVEALLHHGADLRAVDRKGN
TPLHGAAGSGHAGALGSLLDAGGDVVLEERNARGDRALHTAAAPGHIACV
ELLLGTAAEPDVPNADGQTPFALASRGGHLAVTRLIRKYAPAAGTPSGGD
AQFQAHRRANEGGGSATADALPRPHSSGSASNPTPDHRSRDLEHRCYSAA
GLGHQQFEDLNDPTSCRQPVYTSGADSSDRDLLRSTSEQDRRGLYARGGE
LHNTKATPPQSTVEEDVISPASSASAPVQGRHGSLFDGLQVYVVGGRQPL
GSQHSCAAPGNVSALARVPVSARTMVLDSHRLSTASHHHQRREEQQQQHQ
NYYPSNQHTSYNSSLSTASFEGLDPNWRDNVLSAPSTVAPSPPTPVLPPE
DDRRPSCDSTPLLSAVPSTATTNIGDGTSVVGVPGSARALARMIHFNSTN
GRDENEISRRVLGRGTSRSGATAGQEAVEIEESEKEGWGGENSRFSC*
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mRNA from alignment at chr_00:1514650..1519460-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001220.1 ID=Ec-00_001220.1|Name=Ec-00_001220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4811bp|location=Sequence derived from alignment at chr_00:1514650..1519460- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAACCGGCAGAGGGACTGCTCACTACGGCAAGCGGGCGTTTGGTCGT GCGGCCGACGGCAGGAGGAGGCGGCGGTAGCGGAGTGTGTGGGCGGGAGG CCGACCGCGGCAACGAGTCGAGTCGCGCTGGAGGAGGTGACAAGGGCGCT GCGCCGTCCATCCCGATGATGCGGCTGCACGCCGCTTGGCCTCTCACTTT CATCTGGGTGGACCCCGAGAGAGACCTCAAGAGGTTTCCTCCGAGGGAGA TAGTAGTCGAAGAGATTGTGGATCTAGCTAGGGGGCACAAAACGCCGGCG TTCTGGCAGCAAGCTTCGCACCGCGGAATCCACACGCTCCCGGATCCGAA GCTATGCTTCAGCCTGGTGGGGCACGACAGAAGTCTCGACCTCGCGGCCG AGAGTCTCCCGGAGGCAAGGGAGTGGGTGTGCGCGCTTGCGAGGGTGGCG CTGATGGCCAAGCGAGGAGGGTTGGTGGAGGCTGCTGGCGATGCTGTTGC TCCCCTTCTTCCTCATCGCTTTTGGCCCGAGCCCGCTGCAAGCCCTGCCG GCCCTGATCTCGAAGAAAACATGTCTGGCGAAAGGCTCATTGATGTCGAC CACGAGGTTGACTCCCGTGTAGGAGGGCAACGGCAAAGCGATCGAGCCGC AACCGCGCTCAACACAGAGGTTTCCCGGCATGAAGTCTCCCTTCGCTCGG ATGCGGACCTTTCTTCGGAGATACCAAAGGTGTTCGGGGAGGGCGGAGCA TGGTCTGTAGATACGATCCACGCCTGGCGGCGACGCCTCTTTCCGGCTGT CAGGCGCGGAGACATTGCGGCCGTGCTTGCCATTTTCGACCAGGGCTGTC CGGTCGACATTGCCCAGACAGGAACCGGAGACACCCCGATGCTTCTTGCC TGCCGCCTGGGGGATGTCGGGATGGTGCGGGAATGCCTCCGCCGTGGTTC TCGGAACGATCCGCACCCGGCCTTCGGACAGACGGCGCTTCAGGCTGCGG TAGCCTCGGGGCAGGAGGCTTGCGCGCGGCTTATCCTCGAGACGGCCGCT CCGAGCCGCTCCGACGCTGTGGTGTCCAACCACAAGGACCCCAACAAAGA GACACCGCTCCATGTCGCGTGCCGCCGGGGGTATGACGGTATCGTGGAAG CTCTGCTTCATCACGGGGCTGACTTGCGAGCTGTTGACAGAAAGGGAAAC ACCCCGCTGCATGGGGCAGCCGGGAGTGGGCATGCCGGAGCGCTCGGGTC TCTTCTGGACGCTGGCGGCGATGTCGTCTTGGAGGAGAGAAACGCAAGGG GGGACAGGGCGCTACACACGGCGGCTGCCCCCGGACACATCGCCTGCGTC GAACTATTGCTGGGTACAGCTGCCGAACCAGAGTGAGTGTTTTTCCAGCT TCAAGAAGATTTGGGGTTGTTCTGCTCTATATTGCGGTGTTGTGGCGCAC GTTTTTTTTATGCATATATGGTTTCGAGGTTTGGTAGTGAATCCACCAGG GTTTTTGGTTGCCCCGATGCTCCATAGTTATACGGTAGTCAACAACGCTC TTCGTCTCGCTCTTTCTGTGCTTTTGACGTAGCGGCACTATCGTGCTGCC TTCTCTGATGAACTGGCCGACATTATTCAAGCCTGCGGGCACCGCACGTC ACCCCCCCCCGTCTTTGCCTGTGGCTCATGTGTAGCGTTCCGAACGCAGA TGGTCAAACCCCGTTTGCACTGGCGTCTCGAGGCGGCCATCTTGCCGTCA CGAGGCTTATCCGGAAATATGCTCCTGCCGCGGGAACACCGTCCGGGGGA GATGCACAGTTTCAGGCTCATCGTCGAGCGAACGAAGGGGGGGGATCTGC CACGGCTGACGCACTACCACGGCCACACTCGAGCGGTTCTGCATCGAACC CGTAAGCGCTGATGCCTGTTACGCAGAGTCGAAGGGGCTATTGCGTATCG CCACTGCCCCTTCCCCCCCCGCTTCGACAAATAGCGTTCCGGTTCTACAC AAGTAAAGAGTGGAAGACCACAACGATGGCACAATGGTTGTTGTCGATAT CGGACTTAAGGAAATATGTGCCGCTTAGCTTTTTCTGAGTTGAATCACGG TATGCCCGCGCAGGAACATCAAGCTGTTCTTACACGCCCACGCCCTCGTC ACGTTCATAGCAACCAGACGCTCGTTTTTTCCGCATGTTGTCAATATATC ACATATCCTTAATTCGGCGCTATGACTTCGACAGGACGCCTGATCACCGC AGTCGAGATCTGGAACACCGCTGCTACTCGGCGGCGGGTTTAGGCCACCA GCAGTTCGAAGACTTGAACGACCCAACGTCCTGCAGGCAACCCGTTTACA CATCTGGGGCGGATTCTTCTGATCGAGACTTGCTGCGATCGACCAGCGAG CAAGACAGAAGGCAAGATTTGCATCTACTCGATACTTGCCGCTCAAAGGG TGTTGTTTTCGTGTACCAAATACCGCATCTCTGCCCAATGCTGGTTTATC TACGCGTATTATGTGTCAAGCATGTGTTGCTTTGTCTCTCGGGGCTCCTT GGGGTGAATCAGTTCTCGTTCCATTTCCCTTCTGGCACGTTTATGGCCTG CCTTGTAGACAACCGCAAGTCCAAGCAGTACACCCCAAGGAAAATGGACG GCGGTCGCATCGTGGTTTGCTTTCTTGCTGTCGTGGTTGATACGACTGCC TTCCAAAACTGCTCGCGAAGAGCACCTGCAACGCTCGCTCACGACGATCA CCTCCTGTGCTAACCGTGACGACGGTACTCCAGAGGTCTCTACGCACGCG GTGGGGAACTACACAACACCAAGGCTACTCCTCCTCAGTCTACCGTCGAA GAGGACGTCATTTCTCCGGCGTCGTCTGCCTCCGCTCCGGTTCAAGGCAG ACATGGCAGTCTCTTCGACGGCCTTCAGGTGTACGTGGTCGGGGGCAGGC AGCCGCTTGGCTCGCAGCATTCCTGTGCTGCACCTGGAAATGTGTCAGCG TTGGCTCGCGTGCCTGTCAGCGCCAGGACCATGGTACTCGACAGTCACCG CCTCTCGACGGCATCTCATCACCACCAACGGCGGGAGGAACAGCAGCAGC AGCATCAAAACTACTACCCTTCAAACCAGCACACTTCGTACAACTCGTCG TTGTCGACAGCGTCCTTTGAGGGCTTGGATCCGAACTGGAGAGACAACGT CTTGAGCGCACCTTCGACCGTGGCTCCTTCTCCTCCGACTCCAGTTTTAC CTCCGGAGGACGATCGGAGACCGAGTTGTGACTCGACGCCGCTGTTGTCC GCCGTTCCTTCAACGGCAACCACAAACATCGGGGACGGGACCAGCGTCGT AGGTGTCCCGGGCAGCGCCCGTGCTCTGGCACGGATGATCCACTTCAACA GTACTAACGGTCGGGACGAGAATGAGATCTCCAGGAGAGGTGCGTCTGCT TCGGCTTCGTCAATGAGGACCCAGAATCTTACCGAGAAGGAAATTGAGGA GCTGGATGGTAGCACTGCGGCATCGAGAAATAGCGGCGGCGGCGGCGAAA CAGCGGCCGAACCGATAGGGTCGTGGATGACCTCCGTAGATGACGATCAG GATACATCGGGTGCCTCCTCGCGAGCTCCAGAGGTCGGCGGCAAGGGCCA CGGAGGTGGTACGGACCAGACATCTACGTCGGGTAGCCCTCGTGCTGATG CGGCGGAATTCCTCGAATCGCACGTGGACAACAAACCAGTCCTGGGGCGT GGGACTTCACGAAGTGGAGCGACCGCTGGCCAAGAAGCGGTTGAAATCGA AGAATCGGAGAAGGAAGGTGACTCTTTCGTGATAGTTGTTTCACAGGAAA TGGGTGGGAGGCAAACAAGGGATGCATCAGCAGCGTTGGCAGGGCTCTGG AAGGTGTTCCAGTCGGAGGGGTACCCCTATTACCTCCATGAAGCTTCCGG GCATACGCAGTGGGAGGACCCGAGAGAGGTGGAACGCTTGCGTGTGCTAG AGTTCTCGGCTGACACAGGTGTTACAGCCGATGTGCGAGGAGAGGGCTTG GGAGAATGCTCAGAGCCAAACGGAGAGGCAGCGTTGTTGGAGGAGCACCC GGAGGAAGGAAACGGCGGGCTCTCCGACAAAACACCGATTGAAAGAGAAC AACCGCCGCCGCCTGCGTCACCCATCAAACCGGCAGGAGTGCCTGTTGCG GTGAAAGTTGCCAGGTTTGTCGAAACCGTCGCAACTTCAAGGACGGTGGT AAACACTCCACAAGACTCAAACAACTGCCATACAGCAGCATCATCGGAGT TCTGCCATACAGCAGCATCGTCGGAGTTCGGAGAAGGGGATCAGGAACTG AGTCGGGGACGCACGGATGTTGATGCTTTGGAGGAGGATTTCGACGGTGT GGGTCTGGTCGGAGCTACCACTATGTCGAATGAGAACAACAGCATCGACA GTTTTATTTATGGCAGTACGTGTAGCACCAGCGACAAGCGTGACTGCAAC AACAACAATAGCAACAGCAGCAGCGGCAGCAGCGGCAGCAACAGTGGTAC AACCAGCAGCAACGGCAGCGACATGGACAAAAACAGTGGCAACGATAGCG GCAACGACCGCCTCTCAGATGTCGAGGATGAAGTAGCGGGGCCAGATTCG CAACGGTCTACGGATAAAGCGACAACCAAGAAATCGAGGCGTACAGAAAA ATACACAGGCGATGACGTAGGAACGAAACAGTGGGACCAAGCCGAGCTCG ATGTGTCATGGTCATCGCTCCCGCAGGTTGGGGCGGAGAGAACAGCCGCT TTTCTTGCTGA
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Coding sequence (CDS) from alignment at chr_00:1514650..1519460-

>Ec-00_001220.1 ID=Ec-00_001220.1|Name=Ec-00_001220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2544bp|location=Sequence derived from alignment at chr_00:1514650..1519460- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAACCGGCAGAGGGACTGCTCACTACGGCAAGCGGGCGTTTGGTCGT
GCGGCCGACGGCAGGAGGAGGCGGCGGTAGCGGAGTGTGTGGGCGGGAGG
CCGACCGCGGCAACGAGTCGAGTCGCGCTGGAGGAGGTGACAAGGGCGCT
GCGCCGTCCATCCCGATGATGCGGCTGCACGCCGCTTGGCCTCTCACTTT
CATCTGGGTGGACCCCGAGAGAGACCTCAAGAGGTTTCCTCCGAGGGAGA
TAGTAGTCGAAGAGATTGTGGATCTAGCTAGGGGGCACAAAACGCCGGCG
TTCTGGCAGCAAGCTTCGCACCGCGGAATCCACACGCTCCCGGATCCGAA
GCTATGCTTCAGCCTGGTGGGGCACGACAGAAGTCTCGACCTCGCGGCCG
AGAGTCTCCCGGAGGCAAGGGAGTGGGTGTGCGCGCTTGCGAGGGTGGCG
CTGATGGCCAAGCGAGGAGGGTTGGTGGAGGCTGCTGGCGATGCTGTTGC
TCCCCTTCTTCCTCATCGCTTTTGGCCCGAGCCCGCTGCAAGCCCTGCCG
GCCCTGATCTCGAAGAAAACATGTCTGGCGAAAGGCTCATTGATGTCGAC
CACGAGGTTGACTCCCGTGTAGGAGGGCAACGGCAAAGCGATCGAGCCGC
AACCGCGCTCAACACAGAGGTTTCCCGGCATGAAGTCTCCCTTCGCTCGG
ATGCGGACCTTTCTTCGGAGATACCAAAGGTGTTCGGGGAGGGCGGAGCA
TGGTCTGTAGATACGATCCACGCCTGGCGGCGACGCCTCTTTCCGGCTGT
CAGGCGCGGAGACATTGCGGCCGTGCTTGCCATTTTCGACCAGGGCTGTC
CGGTCGACATTGCCCAGACAGGAACCGGAGACACCCCGATGCTTCTTGCC
TGCCGCCTGGGGGATGTCGGGATGGTGCGGGAATGCCTCCGCCGTGGTTC
TCGGAACGATCCGCACCCGGCCTTCGGACAGACGGCGCTTCAGGCTGCGG
TAGCCTCGGGGCAGGAGGCTTGCGCGCGGCTTATCCTCGAGACGGCCGCT
CCGAGCCGCTCCGACGCTGTGGTGTCCAACCACAAGGACCCCAACAAAGA
GACACCGCTCCATGTCGCGTGCCGCCGGGGGTATGACGGTATCGTGGAAG
CTCTGCTTCATCACGGGGCTGACTTGCGAGCTGTTGACAGAAAGGGAAAC
ACCCCGCTGCATGGGGCAGCCGGGAGTGGGCATGCCGGAGCGCTCGGGTC
TCTTCTGGACGCTGGCGGCGATGTCGTCTTGGAGGAGAGAAACGCAAGGG
GGGACAGGGCGCTACACACGGCGGCTGCCCCCGGACACATCGCCTGCGTC
GAACTATTGCTGGGTACAGCTGCCGAACCAGACGTTCCGAACGCAGATGG
TCAAACCCCGTTTGCACTGGCGTCTCGAGGCGGCCATCTTGCCGTCACGA
GGCTTATCCGGAAATATGCTCCTGCCGCGGGAACACCGTCCGGGGGAGAT
GCACAGTTTCAGGCTCATCGTCGAGCGAACGAAGGGGGGGGATCTGCCAC
GGCTGACGCACTACCACGGCCACACTCGAGCGGTTCTGCATCGAACCCGA
CGCCTGATCACCGCAGTCGAGATCTGGAACACCGCTGCTACTCGGCGGCG
GGTTTAGGCCACCAGCAGTTCGAAGACTTGAACGACCCAACGTCCTGCAG
GCAACCCGTTTACACATCTGGGGCGGATTCTTCTGATCGAGACTTGCTGC
GATCGACCAGCGAGCAAGACAGAAGAGGTCTCTACGCACGCGGTGGGGAA
CTACACAACACCAAGGCTACTCCTCCTCAGTCTACCGTCGAAGAGGACGT
CATTTCTCCGGCGTCGTCTGCCTCCGCTCCGGTTCAAGGCAGACATGGCA
GTCTCTTCGACGGCCTTCAGGTGTACGTGGTCGGGGGCAGGCAGCCGCTT
GGCTCGCAGCATTCCTGTGCTGCACCTGGAAATGTGTCAGCGTTGGCTCG
CGTGCCTGTCAGCGCCAGGACCATGGTACTCGACAGTCACCGCCTCTCGA
CGGCATCTCATCACCACCAACGGCGGGAGGAACAGCAGCAGCAGCATCAA
AACTACTACCCTTCAAACCAGCACACTTCGTACAACTCGTCGTTGTCGAC
AGCGTCCTTTGAGGGCTTGGATCCGAACTGGAGAGACAACGTCTTGAGCG
CACCTTCGACCGTGGCTCCTTCTCCTCCGACTCCAGTTTTACCTCCGGAG
GACGATCGGAGACCGAGTTGTGACTCGACGCCGCTGTTGTCCGCCGTTCC
TTCAACGGCAACCACAAACATCGGGGACGGGACCAGCGTCGTAGGTGTCC
CGGGCAGCGCCCGTGCTCTGGCACGGATGATCCACTTCAACAGTACTAAC
GGTCGGGACGAGAATGAGATCTCCAGGAGAGTCCTGGGGCGTGGGACTTC
ACGAAGTGGAGCGACCGCTGGCCAAGAAGCGGTTGAAATCGAAGAATCGG
AGAAGGAAGGTTGGGGCGGAGAGAACAGCCGCTTTTCTTGCTGA
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Synonyms
The feature 'Ec-00_001220.1' has the following synonyms
Synonym
Esi0013_0069
Esi_0013_0069