Ec-00_001190.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001190.1
Unique NameEc-00_001190.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length212
Homology
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BLAST of Ec-00_001190.1 vs. uniprot
Match: D8LE75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE75_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 1.040e-149
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1 
Query:    1 MLQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYFA 633
            MLQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYFA
Sbjct:    1 MLQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYFA 211
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BLAST of Ec-00_001190.1 vs. uniprot
Match: A0A836CFQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ5_9STRA)

HSP 1 Score: 294 bits (752), Expect = 6.090e-98
Identity = 148/229 (64.63%), Postives = 179/229 (78.17%), Query Frame = 1 
Query:    4 LQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQ-------------------EVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYFA 633
            LQR +  E D+KVYEKN+H TM +F +LR+ RK + Y+VFKL+ EKD+ARERR+KVFE+F   ISR N+FQTG +YEV+ E+L+ +DEFRELLD+LFSWCDLCLP N+Q+FAESHR KIQKFQ+QIV EMKR+NSAR+Q                   EV   NLE WEKAH +LLT QE+NAYL MGRSWEQ+LES LLLYNYW +NLK D+IVFGDAG+S+GNDYFA
Sbjct:   32 LQRLVSDEADAKVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKVFEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYFA 260
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BLAST of Ec-00_001190.1 vs. uniprot
Match: A0A835YMR0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR0_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.820e-60
Identity = 104/229 (45.41%), Postives = 144/229 (62.88%), Query Frame = 1 
Query:    4 LQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQ----------VQIVQEMKRSNSARSQ---------EVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKST-GNDYF 630
            L+R+L  E+D K+YE N+H+TM  FP LR+ R+ DY R   L    D+AR+RR KVF +FN  +S+ N+FQT E++ VS E+L ++DE RE L+ + +WCDLCLP N+ AFAE+HR K+Q FQ          V  + E+      R+Q         +V   N   W +AH DLL   E NAYLQ+ + WE++LE  +L YNYWK N+KD ++ FG+ GKS  G+DYF
Sbjct:   24 LKRTLTQESDVKIYETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKVFAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYF 252
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BLAST of Ec-00_001190.1 vs. uniprot
Match: D7G572_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G572_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 4.010e-59
Identity = 108/228 (47.37%), Postives = 142/228 (62.28%), Query Frame = 1 
Query:    4 LQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQ-------VQIVQEM--------KRSNSARS----QEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYF 630
            L+R L  E+D KVYE N+HD M + P  R++RK D+ RV  L      A++RR KVFEYF+ A+++ N FQ  E+Y VS++LL ++DE RE L+ L +WCDLCLP N+QAFAE+HR KIQ FQ         +V E         KR+ + RS    ++V   N E W + H ++L   E NAYL    SWE++LE  LL YNY+K+NLKD  IVF   GK  GNDYF
Sbjct:   92 LKRLLTQESDLKVYEANIHDMMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKVFEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYF 319
[Close]
BLAST of Ec-00_001190.1 vs. uniprot
Match: A0A836C7X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X8_9STRA)

HSP 1 Score: 179 bits (454), Expect = 5.410e-53
Identity = 97/229 (42.36%), Postives = 140/229 (61.14%), Query Frame = 1 
Query:    4 LQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQI---------------VQEMKRSNSAR----SQEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKST-GNDYF 630
            L+R L  E D KVYE+N+H+TM E P+LR   + DY +   L    D+A++RR KVF +F+  I+   ++QT +++++S E+L ++DE RELL+ L +WCDLCLP N+ AFAE+ R KIQ FQ  +               +Q  KR+ + +    +++V   N   W KAH DLL   E NAYL+M + WE++LE  +L +NYWK NLKD ++ F   GK   G DYF
Sbjct:   15 LRRQLTHEADIKVYERNIHETMQELPKLRDACEQDYTKCVTLFSTDDSAKDRRTKVFAFFDANITEATSYQTDQVFKLSEEVLSVLDECRELLELLMNWCDLCLPANETAFAEALRIKIQDFQEYLSGGVTGLANSTNEVNLQLEKRARTLQLLFTTKDVLPENRAGWIKAHRDLLVHCETNAYLRMAKIWEKVLEDYVLYFNYWKTNLKDGDLAFAHMGKGERGGDYF 243
[Close]
BLAST of Ec-00_001190.1 vs. uniprot
Match: D8LEA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA5_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.400e-50
Identity = 93/222 (41.89%), Postives = 129/222 (58.11%), Query Frame = 1 
Query:   22 AETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARS-------------------QEVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYF 630
            A  D K YE+N+H+TMA  P LR++R  DY  +F L+D  D AR RRRKV ++F    +++N  + G+I E S + L+L+DE REL+DRL SW  +CLP ND   + SHR+K++ F+ ++  E+K     RS                   ++V   NL  WE AHH+LL  QE  AYL M R W   ++S LL+Y YWKVNLKD +I F       G+ +F
Sbjct:   22 AHGDPKTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVLDFFM-TRTKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHF 242
The following BLAST results are available for this feature:
BLAST of Ec-00_001190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LE75_ECTSI1.040e-149100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFQ5_9STRA6.090e-9864.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMR0_9STRA2.820e-6045.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G572_ECTSI4.010e-5947.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7X8_9STRA5.410e-5342.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LEA5_ECTSI1.400e-5041.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1488015..1493839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length636
Hectar predicted targeting categoryother localisation
Gene idEc-00_001190.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001190Ec-00_001190Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1488015..1493839 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001190.1Ec-00_001190.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1488015..1493839 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001190.1.9Ec-00_001190.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1488015..1488086 -
Ec-00_001190.1.8Ec-00_001190.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1488768..1488806 -
Ec-00_001190.1.7Ec-00_001190.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1489298..1489339 -
Ec-00_001190.1.6Ec-00_001190.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1489715..1489777 -
Ec-00_001190.1.5Ec-00_001190.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1491117..1491271 -
Ec-00_001190.1.4Ec-00_001190.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1491716..1491771 -
Ec-00_001190.1.3Ec-00_001190.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1492250..1492342 -
Ec-00_001190.1.2Ec-00_001190.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1493110..1493186 -
Ec-00_001190.1.1Ec-00_001190.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1493801..1493839 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001190.1CDS:Ec-00_001190.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1488015..1488086 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001190.1 ID=Ec-00_001190.1|Name=Ec-00_001190.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=212bp
MLQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNA
RERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSW
CDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQEVDGGNLEAW
EKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGD
AGKSTGNDYFA*
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spliced messenger RNA

>Ec-00_001190.1 ID=Ec-00_001190.1|Name=Ec-00_001190.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=636bp|location=Sequence derived from alignment at chr_00:1488015..1493839- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTCAACGGTCGCTTGGTGCCGAGACCGATTCGAAGGTTTATGAGAA
GAACCTCCACGACACCATGGCAGAGTTCCCCGAGCTTAGGAAGCAGCGCA
AGATCGATTACTATCGGGTATTCAAGCTCATGGACGAGAAGGACAACGCT
AGGGAGCGCCGCAGGAAGGTTTTCGAGTATTTCAACGGCGCTATTTCCAG
ACAAAACAACTTCCAGACGGGAGAAATCTACGAGGTCTCCCGAGAGCTGC
TGATGCTAGTAGACGAGTTTCGGGAGTTGCTGGATCGGCTGTTCTCGTGG
TGTGATTTGTGTTTGCCGGGGAACGATCAGGCGTTTGCGGAGTCGCACCG
CCAGAAGATTCAGAAGTTTCAGGTCCAGATCGTCCAAGAGATGAAGCGAT
CGAACAGCGCTCGCTCTCAGGAGGTGGACGGGGGCAACCTAGAAGCGTGG
GAAAAGGCTCACCACGACTTGCTTACGTCGCAGGAGGCGAACGCCTACTT
GCAAATGGGACGGAGTTGGGAGCAGATCTTGGAGTCCCTGTTGCTCCTGT
ACAACTATTGGAAGGTGAATCTGAAGGACGACAACATCGTATTCGGGGAC
GCGGGGAAGTCCACCGGCAACGATTACTTCGCTTGA
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protein sequence of Ec-00_001190.1

>Ec-00_001190.1 ID=Ec-00_001190.1|Name=Ec-00_001190.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=212bp
MLQRSLGAETDSKVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNA
RERRRKVFEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSW
CDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQEVDGGNLEAW
EKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGD
AGKSTGNDYFA*
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mRNA from alignment at chr_00:1488015..1493839-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001190.1 ID=Ec-00_001190.1|Name=Ec-00_001190.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5825bp|location=Sequence derived from alignment at chr_00:1488015..1493839- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTTCAACGGTCGCTTGGTGCCGAGACCGATTCGAAGGTAAGTTATTA
CTAGTAGGTCCATCTGTGCCTCCCTGTTCCATACGTGGCACGTGGTGCGT
GACCGGTTTGTTTACCTTCACCGCTTTGCCTGTCCAGTTGCACAAATCCG
GAGAAAGCTCCAGAAATCGCGAGTGAGGCCCGAAAGTACATACGTCTATT
TTTACCTCTGCGCGTTCTCTCCCTTGTCTAAGACTGCAGCATATTGTTGC
ATTCGGAGCCCAAAATGTGAAGGCCCGCACAACATTGAGGATCTCGAACG
TCTGCGGCATCAATGTGTTGATGCATGTGCATAGCTTTCATCATGGGTAA
AGCGGTCAAGTGCATAGATGATTCAGCTATAATGGTCTCGATAAGCGACG
GGTGTCGGAGCAGAGAACAAAGCATCCTAATAAGCATGCAGTATGCCGCG
TGAAAGTTTCCACTACGTGGAGTGTCCACCATTTTGTCTCGTGAGATCTA
GTCTCACTTGGGGATGGCCCTGTGTCCACCCAACGTGATATGCTGTGATG
GGTTCGCGACTTGGTCGTTTTGACGTAGATACTATCGTTCTTGCTTTGTC
GGAGTGATTAATCTGCCTTTCGTCTTCTCTACCCCCCTCGCCCTTTCCGA
TAGGTTTATGAGAAGAACCTCCACGACACCATGGCAGAGTTCCCCGAGCT
TAGGAAGCAGCGCAAGATCGATTACTATCGGCGAGTCGGGGGAGCCACCT
CCTAGCAGCAGTATTTGCAACACTGACACTCCTTACACGCCTGTGTCAAT
GTCGGAGCGATCGGAGCGACACACCGCGTGTAGACTATGTACACATGTGC
ACGACTTTGGTCGGGTGCGACTGCCAACCCGCTTGAACGAAGTGGCGTCC
GTGTGTTGGCTGTCTGAGCCTGTCTTGATTTTTCCCTTGAGCCTGAGCGG
CAGCTATTCGTGTGTTTGTGTGTCGTCCAAAGGCCGGCACGAAGAGTTGC
AGGGACACTTGTAGCACCAGCTGTTGGTGCTCGCAGTCTTGTCTGCGGTA
TTGTTTTCTACTTCCGCTGGAGGCGATGACAACCTATAAAGTACCAAACC
CTTTCGTGTGACCTCTCTTTCCATGCATTTCACTCTTGTTAAAAAGTACT
TTCTCGCGCGTGGCTTTCGTTTTTTCAGCTCGCCTCTCGCCGAGGGTATA
ACCAAGACCAGTGCTTTCTGAAGCGACTGTGTTAGGTTGACAAACCAATA
CTTGTACAAGTGTTTTTCTTGTATCATTGATGGTGCTCAGGGTGTCCTGC
AAAATCCTTTAGTTTTGTTGTCGATGTGCACATGATCGCCCCTGCTCAAA
AGGAGCTTCGAGCTCGTGATCGTTTTCAGCAGTGATTCGTGCATGCTTCC
ACGACTGTGGCAGGGCACCCGGAGTTCCTGAAGTTTGTTTTGTTTTGACT
GTCTCTGGTTGCGATTCTGTTCCGCGTTTGTTGTTACGCTGGAGCAGGGT
ATTCAAGCTCATGGACGAGAAGGACAACGCTAGGGAGCGCCGCAGGAAGG
TTTTCGAGTATTTCAACGGCGCTATTTCCAGACAAAACAAGTGAGACGAG
AGCAATCAAAGTCGAGCTAATTTCGTGAGCAAAGGTTTGGTATGATAAGT
GTTTTATAGTTTTTGCACTTCGCCGGGCACAACGAGGAGAAATGGGCAGT
ACCACAACAGTAGAGCGCAACGTAGATGTGTCCTTGAAATATTTGACGTG
GAGACGTTGCTTTTGAACCAATCGACATTCATGAGTTCTTCAGTGGACGA
AACTTATCTGCTGTCATTCAATGTTCGACGAGCTGGCATTCTTCCTTGTT
CCGCTAGTTGTTTTTTTGCTTCTTGTTGTGCTACCGCAGCAAGCTACCCG
ACCCTGCCCTGTTTTTGCTTCGTGCGTCTTCCTTGTTGCATTTTGTATAC
ATGGTGGAACCCTTGTGCTACATGACCAATAAGAATCCTAAGCCTCTTCT
TGTCCCACGGTAACTTGAATTAATCCATGAGTTGGTCCATCCGTTGCCCC
TTCTCTCCGTGGTGGCAGCTTCCAGACGGGAGAAATCTACGAGGTCTCCC
GAGAGCTGCTGATGCTAGTAGACGGTGAGGTTTTGCCAGTAGGTGCAACG
AAATGGCAGAGCGGGGGGAAAGAGGGTCCGAAAAGTTTCCGAGATGAGCG
CCGCTTTACACGTTTGCACAAATTTGAATGATATTGCCAAAACCTAAGAA
CGGCATTGTTGCTGGTCCTTGCGTAGGCCGTTCATGCTCTTGTCTGGCAT
ACTTGTGCTATGACTCTCTGTGCTCTTTGCCTTAGGGTGTGACTGTCGTG
GTGTGCCTGCTCCGTTCAGGACGCTTATGCACATTTTCCAATCGTTCACC
CCATGGCATTTCCGAAGTCCAATGCTCCCTCCCTCTCTCCCCCCTTACCC
GCCCAGTGGCTACGGGCTGACTCTCTGTTTTCTGCCTTGCTTGCTTCTTC
ATCACATGGCTCGACGACAACGATTAAATGATCGGTTATTCCCCTTGATT
GATTCTTCCTATAAACAGAGTTTCGGGAGTTGCTGGATCGGCTGTTCTCG
TGGTGTGATTTGTGTTTGCCGGGGAACGATCAGGCGTTTGCGGAGTCGCA
CCGCCAGAAGATTCAGAAGTTTCAGGTCCAGATCGTCCAAGAGATGAAGC
GATCGAACAGCGCTCGCTCTCAGGTACGTACTTGTGCAGAGGCGAAACCG
CTATTTGGGGTGCAGAGGCGAAACCGCTATGCGGAGCTGTGTTGGGTCTG
GATGAGGACAAGGATCATGCCAGGCGTGGGCTAGGAGGAGGAGTAGGCAT
GGGGGTCGACAGAGCCAGCTCGTTCTCGTGTCCGGTGTAGAGTTGGGATA
TGGGCTAGGATCAAAGGAGTACGAAAAGTTATTTAGGGTCAAGTCAGGGG
CATGGCATTGACCATTTGCAGATGCATCGCTCGCTCTGATGTGCTGCGAA
CGGTAAGAACGGGACACAAGAGATTGGAGCGGTCCAATGCTGCATGGTGT
AAAGCAACTGGTGCCCGACAAATTGTGTTCGGTCTCGTGACGTTGTTGTC
GCTCCCCCGCCCCTGCTGCCCCTTCCCTAACTTTTTTCTCTTTGGTTTGC
GCATTGTTTGCTTGAAAGGTCAATTCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNACACGATCGCCTATCGTTATGGC
ATAGTTTCCCCGGCCGTGAAATTTCGCAGAACCTTGGAGTCTTTTATCGT
GCCATAAATGGGCGCGCGCGTCGTACACGGTTGGACTGGATTTTTCGACC
AGCTGACTTTGGATCCTAAAGAGAGCGCCAGCTGCGTATCTTGTGAAAAG
GATTGTAGCCTGTAGCAGGACGGCTGGGCGGTTGGCACATAACTATGTAG
TGGAGTAGTCATGGCGGTATGCCGTCTCTCGTGTACGGGGAGGAAGGAGG
ACCAACGAACAGGTCACCACTTGCCTCACTGCTCACTACCTACTGGCGAA
GCGTGCCTCAATTTCTCTACCGTTTGAAACCGCTTGTGACGATCAAGCGA
TAATTTCGCCCTCATTCCGTAGAAGCGTACATCCCTACAGCTATGCGAGT
TATGCGTCTTTTCCACGCATCAGCCGCCAAAGTTGTCATCATCCGAATTT
GCAATAGCTTGAAGACGTTGAAACGTGGCTGAGGCAGTCCCAGACTAGAA
TGGGTATGTAGCGCGAGTGTTCCGGGTCTCAACATAACACCCGCTGTAAT
TTTCCCATGCGCTGCTTTGGCGGCATTGTCTCTCTCTCCAGCCTTTGGCT
GTGCCGGTGTCGATCCCGGCTGTTGGTGCTTGCGACTGTGCTGCCCTCCG
TTTTGTCGCCGCAGATGCTGTTGTTGCGCTTTGTGTTGAGATACAGTAAT
GTATTGAGGTTCTTGTGCCCTCGTCTTTCTGTCCGTTGTTTCTTTTGTTC
CATGCCGTGCAGGAGGTGGACGGGGGCAACCTAGAAGCGTGGGAAAAGGC
TCACCACGACTTGCTTACGTCGCAGGTATGGTGTGCGTTGTATGGCGTCG
TATTGTATTTCGCCGACGCATGTCAGCGACGCGTCGAAAACAATCGCAAG
AGATGGGAAGTCGGGAGAGCTGCGGAGGGGAGTTACCGAGAGACTTGACG
AACAGATGACTAGACAAGTTAAAGACAAAGTTGACTCGTGTTCACCGAAA
AGTTTCTCACGGATTTAGGCATACCGCGGCACGTTGTTGTTGAAACTCGC
TTCCGATGTTGTCTTTTAATTAGATCCAGATAGCGTGATACGCAAGGTTG
AGATAGTTATGGCTGGAACAAGCGACAAGTGACGTGTTGTATCTGCTTCT
CTGCCCTTACGGTCGCATTCGTCTTGTTGGATCCCTATCCGCCCCCGCAG
GAGGCGAACGCCTACTTGCAAATGGGACGGAGTTGGGAGCAGGTGAGGGA
ATCCTGTAGTCGGAAAGCCATCCTCACGTCGACAATGTTGACTAGTACGA
GAGTATTGATGGTGGCGTCTCCAGGTGACGATGGGGACCATTTGCTGGAC
CAATGAACCCCACAATGAACCGCATGGGTTCATAGGGAGGGAAGCACGCG
AAATCAGACAATACTTTTTCTCGAAAACCTTGTCGACCATTACATTGTAA
CTGTTTTGAGACAGTGCCAGCCGTTATTTTTCTCCTCTAGTATCCCCCGC
TCGATCGCGTAATATATTACGAAGAGGGGTATGAATGTTGACGTTTCGCG
AACCAAATGGCAGAACGTGAAGTACCCACATGCTGGTGGTGTCTTTGGAA
GAGAGAGCGGTGCCTTGTCTTGAAAGGAATTCGTGGTCAACGACGAAATC
ATAATGGGAAGCAACAAGCAAGATGGCGACTTTCTCCTGCTCGTGCTTCG
CCTGCTTGGCCTGCAATTCCTGCAAAATTTCAGATCTTGGAGTCCCTGTT
GCTCCTGTACAACTATTGGAAGGTGCGGTCTGCGTTTCTGATTTTGTTTT
TCTGACAACGTTTCATTTTGGCCAGTTTTTGGTTGTGGTCATGCTATTGC
TCCTCTTTCATTGAAACACGCCTGCGACCAGTGAACATCTCGCGGCGCTT
TACCGAGAAGGACTGTAGTCCAGGCGGCGGGTCTACACGAACCCGTGAAG
ACCATACACGAATACCGCTTCGAAAACAACTCAAGCTTTGGATCTAGAAA
ATGCTAGTTCGCGAGCACGCACGGCGACAAGCGAAGAGATTGCTGAAGCT
TGCTCGCAAAGCTAATTGAAGGCATTCATGGCGGTAGGAATCCCTGTCTG
TGTGGGTGCCGTTGGTACGCCCAAAAGTGTGCCGAGAGAGGTGTAGGTGT
AGACCCGTACGTCCGCAGTAGATGAGATGAGAAAGGGAAACTTGGACTGT
TACAGACGAAACCACCGACGCTTAGCGGTCTTGTTGAAGCTGCTGTCGGT
TGTGTCGGTGTACTCCGCCCACTTCCAAAATGGTGCATCTTCAGGTGAAA
ACCATTCGATGGCGTGTTTTGCCCTCCCCATGCTAGAAACGCCTTCTTTG
ACAGGTGGTTTGGCTTAAGAATGGGCGCGTAGTCGATGCTTTCAATGGCT
ACGTTCGGCGAGCAAAGAACTACCCACTTGCTTCTTGTGAATACAATATG
CAGGTGAATCTGAAGGACGACAACATCGTATTCGGGGACGCGGGGAAGTC
CACCGGCAACGATTACTTCGCTTGA
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Coding sequence (CDS) from alignment at chr_00:1488015..1493839-

>Ec-00_001190.1 ID=Ec-00_001190.1|Name=Ec-00_001190.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=636bp|location=Sequence derived from alignment at chr_00:1488015..1493839- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTTCAACGGTCGCTTGGTGCCGAGACCGATTCGAAGGTTTATGAGAA
GAACCTCCACGACACCATGGCAGAGTTCCCCGAGCTTAGGAAGCAGCGCA
AGATCGATTACTATCGGGTATTCAAGCTCATGGACGAGAAGGACAACGCT
AGGGAGCGCCGCAGGAAGGTTTTCGAGTATTTCAACGGCGCTATTTCCAG
ACAAAACAACTTCCAGACGGGAGAAATCTACGAGGTCTCCCGAGAGCTGC
TGATGCTAGTAGACGAGTTTCGGGAGTTGCTGGATCGGCTGTTCTCGTGG
TGTGATTTGTGTTTGCCGGGGAACGATCAGGCGTTTGCGGAGTCGCACCG
CCAGAAGATTCAGAAGTTTCAGGTCCAGATCGTCCAAGAGATGAAGCGAT
CGAACAGCGCTCGCTCTCAGGAGGTGGACGGGGGCAACCTAGAAGCGTGG
GAAAAGGCTCACCACGACTTGCTTACGTCGCAGGAGGCGAACGCCTACTT
GCAAATGGGACGGAGTTGGGAGCAGATCTTGGAGTCCCTGTTGCTCCTGT
ACAACTATTGGAAGGTGAATCTGAAGGACGACAACATCGTATTCGGGGAC
GCGGGGAAGTCCACCGGCAACGATTACTTCGCTTGA
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Synonyms
The feature 'Ec-00_001190.1' has the following synonyms
Synonym
Esi0013_0059
Esi_0013_0059