|
Homology
BLAST of Ec-00_001040.3 vs. uniprot
Match: D8LE58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE58_ECTSI) HSP 1 Score: 379 bits (973), Expect = 7.520e-118 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 3
Query: 1458 EGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL 2402
EGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL
Sbjct: 82 EGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL 396
BLAST of Ec-00_001040.3 vs. uniprot
Match: A0A6H5K2E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E8_9PHAE) HSP 1 Score: 323 bits (829), Expect = 3.070e-94 Identity = 279/388 (71.91%), Postives = 281/388 (72.42%), Query Frame = 3
Query: 1458 EGVALKTRGSNTSVTSINSLDSLGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------DIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL 2402
EGVAL+TRGSNTSVTSI SLDSLGLGLDSPTLSI HG GHF F+CSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D GATCTSTAVHLAQVHGHHGVYRFLN MYPGKASPFDAFSDPTVVAEQEMVDQDK LDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTF L
Sbjct: 230 EGVALQTRGSNTSVTSIKSLDSLGLGLDSPTLSIPHGKGHFRFNCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCDHIDDTPENSSSHPTAACEGCRPTYFIASFSSGGILDPKDNSFGSLPSVPQTDRLAVDSCYRQHPGPHRSPALEGCSREAMERAARNGHLEVVKLLHDRGATCTSTAVHLAQVHGHHGVYRFLNAMYPGKASPFDAFSDPTVVAEQEMVDQDKSLDLVVQREARRRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFAL 617
BLAST of Ec-00_001040.3 vs. uniprot
Match: D8LE59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE59_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 1.320e-14 Identity = 49/54 (90.74%), Postives = 49/54 (90.74%), Query Frame = 3
Query: 966 MDRAARGGHLDVVKFLCQQGQKCTTXXXXXXXXXXXXXXXVWLHRNTSAGATKA 1127
MDRAARGGHLDVVKFLCQQGQKCTT XXXXXXXXXXVWLHRNTSAGATKA
Sbjct: 1 MDRAARGGHLDVVKFLCQQGQKCTTEAIDGXXXXXXXXXXVWLHRNTSAGATKA 54
BLAST of Ec-00_001040.3 vs. uniprot
Match: D8LE60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE60_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 6.560e-13 Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 832 KLIFSYQDGGAPALWFPEDANLAAELGHLQL*KPSKGDSATLWMRWIVQQEEVISTSSSFFVNRARNAQ 1038
KLIFSYQDGGAPALWFPEDANLAAELGHLQL K KG V+ +++ TS + V+R++ A+
Sbjct: 38 KLIFSYQDGGAPALWFPEDANLAAELGHLQLMKTIKG----------VKSGQILFTSRNLKVSRSKIAR 96
BLAST of Ec-00_001040.3 vs. uniprot
Match: A0A485KE70_9STRA (Aste57867_3767 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KE70_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.900e-6 Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 3
Query: 1572 GHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEG 1754
GH + MD AA G+ID+L+ LHD G CTT+AMD AA G E V+WL R EG
Sbjct: 457 GHNKGEHDRIKMDTAAANGYIDILEYLHDHGATCTTDAMDLAAGKGHFEVVQWLDAMRTEG 517
BLAST of Ec-00_001040.3 vs. uniprot
Match: A0A485L118_9STRA (Aste57867_14581 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L118_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.320e-5 Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 3
Query: 1587 SCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEG 1754
+CS + MD AAQ GH++ +++LH+ G ++ AMD AA G V+WL NR EG
Sbjct: 294 TCSTWPMDTAAQHGHVEAIRVLHEHGWPASSRAMDKAAGGGFLNVVQWLHANRNEG 349
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 3405 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-00_001040.3 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_001040.3 ID=Ec-00_001040.3|Name=Ec-00_001040.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=494bp MKTIKGGFRYSVDAMDRAARGGHLDVVKFLCQQGQKCTTEAIDGAAKEGH LEVVVWLHRNTSAGATKAAMDYAAANGFLPVVQWLHGNRREGCTVSAMNW AAENGHLSVAQFLHHNRREGCTTAAFDRAAMNNHVHVIMWLTENRSEGGT ESALQWAVSRGHTKMVALLLAPRKDSGSEGVALKTRGSNTSVTSINSLDS LGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHEC TTNAMDWAAAFGKTETVKWLSENREEGCTKDAMDHAAAGGHLETVKWLHE NRREGCTRFALTDAAGNGHMETVEWLHRKRPEGCGRRAMDDAAANGHVEM VRWLYDNRLEGCSREAMERAARNGHLEVVKLLHDIGATCTSTAVHLAQVH GHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREAR RRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL* back to topspliced messenger RNA >Ec-00_001040.3 ID=Ec-00_001040.3|Name=Ec-00_001040.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3405bp|location=Sequence derived from alignment at chr_00:1342680..1353025- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
CCCCGGGTTGGTTCGGGCTGCCACCCAGGGTCGACATGCTGTAACGAAGA CTCATACTTCCAGGCTCCCAGGAGACTAGGTGTACCCCTCCGCCTCATCC CGCCGACCTTCTCTCTTTCGCCGCGGCGACTTCCCAGGCGTCAAACTACC GTTGCTGATGAGTGAGGCAGCTGCTCGCTGTACTGCTGTGTACCGATGTC ACTGCGGCAGCAGAGCACCGAAATGCACCTGGCCAAGTCCGTGTACCCTC CCTTAATCCTCTATATGTGCTCCCTCCGAGGGCGGGACTCCCCCGAGTAC TGCCTATGCCCCTTTTTGCTGCTGAAAGCCCGTGCGCAATCGCGATGGCT CATCTACCGAACGCGCGCGCCGAACACGCGAGTCCGGCCACTGGGCCGCC GTGAGAACTGCCGAGACGTGTGTGTGCAGGACCGCTAGGAGCAATCAGTA GGCATGGCCAATGTGTTCGCTGCTGACCGCGCTCCTTTCGTGATTTGGTG ATGGTAACAGAGCACAGAGCAAGCGTGTGTGAGCCACAGTCTGGCGATAT TTGAAGTGTCAATCTTTTCGTGTCGGTTTAAGTTTTGACGCTTTTTCACA AAAATTTCGCCGTCAGAGTTTGCCTCCAAAAAAGCGGCGTAACCTCGTCA CGTCAAAACTTCCTGAAATGTCAATATTTCACGTCATTTCAACAACACGT GGATTCCCTCTACTGTAGAAAGCAGATCGGCCTGGATCGGGGGCTGGTTG AGCTTTGCCGGCGGGCACCAGAGGAGCAGTGGAGGTGGAGGGTGCGGACG TGCGGAGAAAAGTGCCCGCCTGCGAGAGTTGGAAGCTCATCTTTTCCTAT CAAGATGGTGGCGCCCCGGCGCTGTGGTTTCCTGAGGATGCCAACTTGGC CGCAGAATTGGGACATCTCCAGCTAATGAAAACCATCAAAGGGGGATTCC GCTACTCTGTGGATGCGATGGATCGTGCAGCAAGAGGAGGTCATCTCGAC GTCGTCAAGTTTCTTTGTCAACAGGGCCAGAAATGCACAACGGAAGCTAT TGATGGTGCTGCAAAGGAGGGGCATTTAGAGGTTGTCGTCTGGCTTCATC GAAACACAAGTGCTGGGGCAACCAAGGCAGCGATGGATTATGCTGCTGCG AACGGTTTTTTGCCAGTGGTGCAGTGGCTGCATGGCAACAGGCGTGAAGG ATGCACGGTCTCGGCCATGAATTGGGCCGCGGAGAACGGCCATTTATCGG TGGCACAATTTCTGCACCACAACAGGCGCGAAGGCTGCACGACTGCCGCT TTCGATCGCGCCGCGATGAACAACCATGTGCACGTCATCATGTGGCTCAC CGAAAACCGTAGCGAGGGAGGCACCGAGAGCGCCCTGCAATGGGCAGTGA GTAGGGGGCACACAAAGATGGTTGCCCTTTTGTTGGCACCGAGGAAGGAC AGCGGCAGTGAAGGTGTTGCTCTGAAAACGCGGGGCTCAAATACGAGCGT CACCAGCATCAATTCACTTGACAGTCTAGGGCTCGGCCTGGACAGCCCCA CCCTCAGCATTGCCCATGGCAATGGGCACTTCGGCTTTAGCTGTTCCAAG TTCGCCATGGATAAGGCAGCACAGGGAGGACACATTGATGTGCTCCAACT ACTGCACGACCAGGGCCATGAGTGTACGACCAACGCCATGGACTGGGCTG CGGCGTTCGGAAAAACGGAGACAGTCAAGTGGCTCTCCGAGAATCGCGAA GAAGGGTGCACGAAAGACGCAATGGACCACGCGGCAGCTGGCGGGCACCT GGAGACGGTCAAGTGGTTGCACGAAAACAGAAGAGAAGGGTGCACGCGCT TCGCCTTGACTGATGCTGCGGGCAACGGTCACATGGAGACAGTCGAGTGG CTTCACCGAAAACGACCCGAGGGGTGCGGTCGCCGGGCAATGGATGATGC CGCTGCAAACGGGCACGTTGAGATGGTTCGCTGGCTTTATGACAACAGGT TGGAGGGATGCTCAAGGGAAGCGATGGAGCGCGCTGCTCGAAACGGGCAC CTGGAGGTGGTGAAGCTGCTTCACGACATAGGAGCGACCTGCACGTCAAC GGCTGTTCACCTAGCTCAAGTGCACGGGCACCACGGTGTCTACCGCTTCC TCAACACTATGTACCCTGGGAAGGCATCACCGTTCGACGCATTCTCAGAC CCGACCGTGGTGGCGGAGCAGGAGATGGTGGATCAGGACAAATGCTTGGA CTTGGTGGTGCAACGAGAGGCGCGGCGGCGGCGGCAATCCGTCATCTTTG CTGACACGGTCGAAGCGTCGGAATCTCGACGTCGGGCGTCGCTACCGATA CCATTTGGGCACAATGGGAAGCCGGCACTCAGCCGCATTAATACGTTCGG GCTGTAGCCTGTCAAATGTTTGTGAATCCCGTAGATTTGTGGCCGTTTCC CTTCTCGGTAGGTGGTTGTTCACCCGGTCAAACCTACATTTTGCCCGTAC TACTGGCTGGAATAACTGTTTTCCGCGAGATAAGATAACGTTTCGTCATG GCGCATTGCCATTTCCCCCTTTTCGCCGGAAGGTGAGATCTCTGAGGCAG TGTATACTTTATCACGGCTGTTCCGCTAGAACAAGGGAGGAACGATAGAA AGGCTGGAACGGTAGAGTTAACGCAAGATGCTTACCCCCGTTTGGTGCTG TGTTGTTCTTTTTCGTTGACGGAAGCATGCACGATTTTCATGGGAAGTAC AAATTTGTGGTGTGTACACCATCGTGTTTTTGGCGTCGGTAGCTCTGCGG ATGTTTGTTTGTTCCTTCTGTATGTCTTCCGAGTCGATCCGATCCTGCTT CGCGCAAGTTTGCTCGTGTATTGCAAATCAAATAGATTTAATTCGCAAGG CAAACCTAGCAGGCGGCTTCGCTTCGCGAGCGCTGGGTGAGCTGTTGAAT GTTCATGGTGTACTTTTGGAATTTGCAAGGTCATTGGTTAAATATGATGT ATTGAAGTGCAAGGCGGGCCTGGCAGAACAACTGTGCGCAGCACATGGCA TATTTTGCTTGGAAAAGCAAGAACTTACAGTAGAGAGAATACGATATACT GCATAAGAAGCACGGTCGTGTCTCCTAGACTACTGTGTTGGTGGAGTACA TACCCATTCTTCACATGGCTTCCTTTCGCCTTTATATGGACACCTCTTGC TCCCATTCTCCCCTCGTCCTGCCACTATCTGCCTCTTTGTTAAGGCAACT CCGGTTTTTATGCCATTTGTTCATAAAGGGTTTTAGCTTGCTGCCGCTGA GAGTCATGATCCAGGTCGAAATAATTAAGCGGCCGGCGAAGCGTATACCA CGTGTGGTCCTCCTGAACGACTCAGGAGGGATGATTTTTTTGTTTTGCTG CCGAC back to topprotein sequence of Ec-00_001040.3 >Ec-00_001040.3 ID=Ec-00_001040.3|Name=Ec-00_001040.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=494bp
MKTIKGGFRYSVDAMDRAARGGHLDVVKFLCQQGQKCTTEAIDGAAKEGH LEVVVWLHRNTSAGATKAAMDYAAANGFLPVVQWLHGNRREGCTVSAMNW AAENGHLSVAQFLHHNRREGCTTAAFDRAAMNNHVHVIMWLTENRSEGGT ESALQWAVSRGHTKMVALLLAPRKDSGSEGVALKTRGSNTSVTSINSLDS LGLGLDSPTLSIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHEC TTNAMDWAAAFGKTETVKWLSENREEGCTKDAMDHAAAGGHLETVKWLHE NRREGCTRFALTDAAGNGHMETVEWLHRKRPEGCGRRAMDDAAANGHVEM VRWLYDNRLEGCSREAMERAARNGHLEVVKLLHDIGATCTSTAVHLAQVH GHHGVYRFLNTMYPGKASPFDAFSDPTVVAEQEMVDQDKCLDLVVQREAR RRRQSVIFADTVEASESRRRASLPIPFGHNGKPALSRINTFGL* back to topmRNA from alignment at chr_00:1342680..1353025- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-00_001040.3 ID=Ec-00_001040.3|Name=Ec-00_001040.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10346bp|location=Sequence derived from alignment at chr_00:1342680..1353025- (Ectocarpus species7 Ec32 male_plus_femaleSDR) CCCCGGGTTGGTTCGGGCTGCCACCCAGGGTCGACATGCTGTAACGAAGA
CTCATACTTCCAGGCTCCCAGGAGACTAGGTGTACCCCTCCGCCTCATCC
CGCCGACCTTCTCTCTTTCGCCGCGGCGACTTCCCAGGCGTCAAACTACC
GTTGCTGATGAGTGAGGCAGCTGCTCGCTGTACTGCTGTGTACCGATGTC
ACTGCGGCAGCAGAGCACCGAAATGCACCTGGCCAAGTCCGTGTACCCTC
CCTTAATCCTCTATATGTGCTCCCTCCGAGGGCGGGACTCCCCCGAGTAC
TGCCTATGCCCCTTTTTGCTGCTGAAAGCCCGTGCGCAATCGCGATGGCT
CATCTACCGAACGCGCGCGCCGAACACGCGAGTCCGGCCACTGGGCCGCC
GTGAGAACTGCCGAGACGTGTGTGTGCAGGACCGCTAGGAGCAATCAGTA
GGCATGGCCAATGTGTTCGCTGCTGACCGCGCTCCTTTCGTGATTTGGTG
ATGGTAACAGAGCACAGAGCAAGCGTGTGTGAGCCACAGTCTGGCGATAT
TTGAAGTGTCAATCTTTTCGTGTCGGTTTAAGTTTTGACGCTTTTTCACA
AAAATTTCGCCGTCAGAGTTTGCCTCCAAAAAAGCGGCGTAACCTCGTCA
CGTCAAAACTTCCTGAAATGTCAATATTTCACGTCATTTCAACAACACGT
GGATTCCCTCTACTGTAGAAAGCAGATCGGCCTGGATCGGGGGCTGGTTG
AGCTTTGCCGGCGGGCACCAGAGGAGCAGTGGAGGTGGAGGGTGCGGACG
TGCGGAGAAAAGTGCCCGCCTGCGAGAGTTGGTAAGAGAGAGTGTTTTCG
AAGCATCGACGGTGCCCCCGGAAGATGCGGCCAAAATCATCAGCAGTCAT
GAGATAACAAGATGTGGCCTATTAGACTATGTACACAGCTATTTTGCCGT
CTGGTGCCCCAGCCGAGCCCTCTCTCACCTCTCACATCATGCGTGCCTAC
CTTCACACGTGAAGACGCTCTTCTGCGCCGATGATGCGAATCATCACAGA
AAGCGAGAGATGGGCAGAGGTCCCTGACTCATCATGCATGTACACGATGT
ACAGGATCACATCTACGGCTAGACTGTTTCCCACCAGGCGTCGAGAGATC
GAGACTGAATTCTGATTTCGTTTACAATGATACTTCGTACTGTAGTAGTG
TTTCGTCGTACATATCTCAAGAACGAGACAGTCAAATGTCACGTTGTGAT
TTATCGAGTGGTCGGTCGGCCGCGCGGGAGCCCAAAGTCGCCATGCTTTG
TGTAGATGTCTTGTTCCGGCCTCGCAGGAGCCCTGGGAAATTTCTTGAAC
GCACGAAATAAATTTCCGAACCAGTGAAGGACGGTTCACTCTTTGGCCCA
AGTGACCTTTCGTCAACCGAGCGGCGGATACCAAGTCTTGGGTTGAAGCA
TATGCGTCAGTACAGCGAACCGCTAAGATAGAACATCCGCGCCCAGAGAG
CCCAAACCACCCCCACACCCTCGCCTATGGGGGGTTTGAAGCTACTCTAC
CGCCTCCGCGCTCGGTTGAAACGGAGGCCACAGCTGCAACTTGATGTGAA
AGAAACAGATCACGGCTTCGCGATCGAAAAAGTCCGGTGAGCGACTCACT
CTCACGCTGTTCCCATCAGTGGGCAGACGGTGTATCTTGCAGCATGGGGT
ACTGAACAAGCCTGATAAGCCAACGTGATGCCGTTGCTCACTCTGAGAGT
ACAAGCAAATCCATAGGGAAAAGTATCCTGTAGATGAATTTGTTTATAGA
TTGTCTTGGAACAGGGTTGTCTCCGAACAACTACACAACTTGCATGCTCT
GCTGTTGTGTGCGTGCAGGAAGCTCATCTTTTCCTATCAAGATGGTGGCG
CCCCGGCGCTGTGGTTTCCTGAGGATGCCAACTTGGCCGCAGAATTGGGA
CATCTCCAGCTAATGAAAACCATCAAAGGGGTAAAGAGTGGCCAGATCCT
CTTTACGAGTAGGAATCTCAAGGTGTCACGGAGCAAAATCGCCCGGTGAT
TTTCTCCACGGTACATAGATAGTCTACATCGAGAGACTTCGTACCCGTTC
ACTCAAACATATCGTTGGTTGCCCTTCAGTAGTGCCACGCTTCCGTGATG
TTGAAATATCTTAGGTTTAATCTCCCCGGTGCTCTGAGGGCCAACATCGT
AGCGTCCCTATTCCGTACGAATGTCTGAAGTCGTCGTCGTAAGCGAGGGG
CCGGGCCAGACAGACCACACGTAAGAGATGGGTTCATCATCTTAGCTTCA
CATTAATCTTTTGATTTTCCAACTTAGTCAAGTAGATCGTTGGCGAGTGC
CGTGACGCCCGCACTTGCGAAACTGGAACTACGTAAGAATGAAGCGAAGC
CTACAGCGTACGTACGTCCGGTGGAATCGAAAACCCCACAGACCCACCCC
ATAAGCACGCATCTAGGTCTCACGGTGTGGGATTAAAAGCTAGCCCTCGG
CAGGGGGTCATCAAACATATTGCTCGAGAGTAAAGTTGGTGACGATACCA
GTGAGATCCACAGTGTTTGGGGTTGGTGCTTGAGCTCGATCCTGTCACAC
TTGATTTTATGGATGGCAATAGGGATTCCGCTACTCTGTGGATGCGATGG
ATCGTGCAGCAAGAGGAGGTCATCTCGACGTCGTCAAGTTTCTTTGTCAA
CAGGGCCAGAAATGCACAACGGTAAGTACAAGACCTGCCATTTTTCGCCA
AAATCACGGAGACCTCACAATAGTACTTGAACCAAGGACTTTGGTGTAAA
ACGTTGCGACCAGCCATGTTACCCTTGCCACCTGCTTCCTCAGTAGGAAA
AGCGTGTGTTTGGCCCTACATAGATCAGCACTCGTTTCCACTCGGGTGCG
GTTGGTATCGCAGAATAATCGACCACTTCCTTTGAAACCGCAGGAAGCTA
TTGATGGTGCTGCAAAGGAGGGGCATTTAGAGGTTGTCGTCTGGCTTCAT
CGAAACACAAGTGCTGGGGCAACCAAGGCAGCGATGGTGCGAAACGAGAT
ATTGCCTTGTTTGTCTTTCGCTTGACTATCCAGTTGGCAATGCTTGAGCT
TAACACACAAACGTTATCAAGCACTTGATGCGTCCTCTCATTCTGCAGGA
CCTGGGAATGACGAGACATTTTTTGCTATGTGACAGTACAACACGTTTGG
AGGACTCACAAGTGATCTGGCTCATACTTGCATTTCTTCGCTCAACTTGA
TAGAATGACCTGGTATTGGCACTGTATGGAGCTGGCACTGGTGTTGCTGC
TGCTGCTACCACTACTCCTGTTGTTGTCGCATAGGATTATGCTGCTGCGA
ACGGTTTTTTGCCAGTGGTGCAGTGGCTGCATGGCAACAGGCGTGAAGGA
TGCACGGTCTCGGCCATGAATTGGGCCGCGGAGAACGGCCATTTATCGGT
GGCACAATTTCTGCACCACAACAGGCAAGTACACCTACGCTTGGCTCTAG
GAGGTGGATATCTTATTTATGCAAGTCCTCAAGGGTTGGACCAAGAACGC
TGTAGGAGTGTAGTGACCGACGGTCATGATAAAGCCATTACTTCTCGATG
CAGCAGGAAACGTACGTGTGGTACGACATGACGCAGGCGAGTCGCCCATG
CATGCAAAATATTTGGCTTCCTGCGCGAAACCTTGTCCATGCTTCGAGGC
TGATACGCCGTATGCAGAACAGACGTTGCCCGACAGGCTATGTGACTTGT
CGTCTTGCAGGCGCGAAGGCTGCACGACTGCCGCTTTCGATCGCGCCGCG
ATGAACAACCATGTGCACGTCATCATGTGGCTCACCGAAAACCGTAGCGA
GGGAGGCACCGAGAGCGCCCTGCAATGGGCAGTGAGTAGGGGGCACACAA
AGGCAAGCAAACACCGGCATATGGCCGTGTAAGGTATTCTCATGATGACA
AAATTAAACTGGTGGGAATACCAAAGTCACGTCGGTATGCTAATAGGAAC
ACATTGGACGTTCAGTATTTTCATGAACTGAGACAACTGAGGGATACTGA
ATTGTCGAGAGACATCAAGATGTGATGCAAGTTGTAGTAAAGTTTCTGAT
TCTGCACTCGGTATCTTCAAGTGTCTGTCTACAACAATGTCGCACCAACA
GCGGTTGACATGGTTGCCGATTTCAAGACCCGAAACGGCTCGACCATCTG
CTCGTGTGAATCTCACTGCGTCTGCCCTCCAATCATGTTACCCCCCGTCC
TCCCACGTCCTCGCGCCTAAATTACGTAGATGGTTGCCCTTTTGTTGGCA
CCGAGGAAGGACAGCGGCAGTGAAGGTGTTGCTCTGAAAACGCGGGGCTC
AAATACGAGCGTCACCAGCATCAATTCACTTGACAGTCTAGGGCTCGGCC
TGGACAGCCCCACCCTCAGCATTGCCCATGGCAATGGGCACTTCGGCTTT
AGCTGTTCCAAGTTCGCCATGGATAAGGCAGCACAGGGAGGACACATTGA
TGTGCTCCAACTACTGCACGACCAGGTGAGGTGTCATAGAACATACCGCC
TACGGAATATTGGGGACCCTTGCTCCACTTCATGACGTCATTCCTCTTTG
GTGCGACCCGTCCAACCGATCTCTGGGGATGGATCTTGTCCAATCCGGTA
TGGTGACAGGAGGGAAGGTCGTAGAGTGCGACAAACATCTGGTTGCAGAG
TGGTAGCCTCGTTTCGCCTGATCTCCCCACTGATTGGACTATTCGCAGGT
CTTGATCGTGGTTTTGATCAGAGCGCCGTGCGCCGAGAAACAAGGCTGTG
TGAGTCTGGTTGTTTGAAGGTGTTGCCGTATGTTTCTTGTCGAAGAGTTT
GCAGCATCAAGCGAAAAATGACGTGCTGTAATCACCGTGTAGTTGCCGCT
AGTGTACAGCTTGAAGGACACTGTTGGGGGAATGTCGACTCGAATGATCT
TTAAGCTCAGCAGCGGGTTCTACAAGCGGATACTTGACGAAAAGCCGCAA
GTATGACTCTGTCAAGAGTTCACATTCGATATTTGGTCGTAGGTATAGCC
TCTGACGCGTAAAGCCAAGTCCGACATGGGTGACGCCGATGTTCTCAAGG
TATCCATGCTTGGAGATTAACAATAAAAGTTCTGCTCTACCGTGACAGGC
ATGCCACTATCCTTCGCGCAGTTGTGGCCGCGAATACATCGTCGCACCCC
ACCATATTGTAGACGACATAATTGTTTTTTCGTCCAAAGAGCTTAGAGGA
TGCTACACTGCTGTTTCCCAGGGCCATGAGTGTACGACCAACGCCATGGA
CTGGGCTGCGGCGTTCGGAAAAACGGAGACAGTCAAGTGGCTCTCCGAGA
ATCGCGAAGAAGGGTGCACGAAAGACGCAATGGGTGAGGTATAGACTACG
GCAGGAATGTCACGATATTGTGGCGACTGACATTTCTACAGATCAGCATG
GAATATAATGTCAAGTATACGCATAGCTGGCTTCGCTCAGATCGTGTCCA
TTCCGGAAACGCCTAACCTTAATGTAGATTAGCGTGTCGGCAGCCATTAC
TCAACCTATTGCAGCATGGAAGTGTCACCGGCTTGAGTTACATGGGGTGG
GACGTCAGTATGTTTCGCCGCCGGAAAGCACGAGCGACTCCAGCGTCATC
TTGAGTAGACTGCGTGCGTGAACATTGTTGCTCATAGAGGTATGATGCAT
CACGATACAAAGGTTCTTGAATCCCAACATCGACAATCGGCGACCTTCGT
TTGAGATGCACCACGACCATCGAGTCCTCGTGTGTTGCAAAGCAATACAA
GTGGTCTACACCCATGAAATGTGCTCAACTGTGACTCAGTTGGTTCTCAG
AGGACCGTCTGTTTGAGAAGGCTACAGTAGTTATGACGTTCTCTCGATAT
AGGCTACCACACACCGTATCCACATCCTTTATCGAGGTTTTCCCGACGTG
ACACGTCAGACCACGCGGCAGCTGGCGGGCACCTGGAGACGGTCAAGTGG
TTGCACGAAAACAGAAGAGAAGGGTGCACGCGCTTCGCCTTGACTGATGC
TGCGGGCAACGGTCACATGGAGACAGTCGAGTGGCTTCACCGAAAACGAC
CCGAGGGGTGCGGTCGCCGGGCAATGGTGAGAGCGCCGGAGCGTCATTGC
AGTTTATTGTAGTACTATGGAACAAAACACAAGATTTTACTAATATTATT
CTTCAGAACCTGTTTCCACGAAAAGGAGAACTATATGATCGTAGTGGGTT
GGCCGGACCGGGAGCCTCAGAACATTCACAATCAGATTAGAGAAATAACT
CATCACACCGCCGTCGACGAGATACGGCGCTGCGGTGGTAACTCGCTACA
CAAAATCAGGATTTCCTTAATCTTCTAATCTCGTTGAAACCAACTTCGCG
GTTCGAGGATGTTCGCCGAAAGTGAAAATTGTTCGATATCGCGTCCCCAA
CGCCGCTCTGAAATCGCCTAGACAAATGAAAGGCTAAGGTTGTGCAAAAT
GCAGTCCTTATACTCACTGGAACCTGCCCCTGGCTTGGCATCATGCTACA
TCAGCTCGCAAAACGTGCGTGGTACAATAACAAAAAAGAAGAGTGTACTT
TGAACACAGACAACTCTTCTTCGGATATTGTTTTATCGATGACAACATGG
CAGGATGATGCCGCTGCAAACGGGCACGTTGAGATGGTTCGCTGGCTTTA
TGACAACAGGTGCGACCACTTTGAAGACAACCCCGAATACCTATTCAACG
ATGCTCTAACCTGCGGCCTGAGTATCTGCGTTCATCGTCGTATATCTTTA
CGACCGCAAACGTAATGATAGGAGAAGCTTATGGGCTACGAGTTTCGACA
GCGAATGCTAAATGCCATGAAGCTCCGAACTGCGTGGTGTTGGCAGGGCG
TGTGCCACTCAAGTTCTACATCGTGCTACAAGACTTGATACGGGATCTTC
TCGGCAAAAGTCTATGATCACCGCCCATCGCGTTACTCCATGCGGTTGGG
CACAATATTCTACAACAATATCTATACTCCCGTTGTTCTGTAACCTTGTA
TACGCGTCCCCACATTAACGCCGAAGGGCGCTTTTTGTTTGTGACACCTA
CAGCCCTCGCAAGCAGCGGGTAGGCCAAGCATATTTCATCGCATCCTTCA
GCTCTGGAGGGATTCTTGACACCAAAGACAACAAATCTAGGCTCACTTCC
AAGCGTACCGCAGACAGGCAGGCATGCTGTACACTCCTGCTATCGCCAAC
GCCCAGCTCCGCATACGTAGCCAGCGTGGGTTTTCATGGGTACCGGTATG
GTCTATAACACTGCTTTACACTGCTTTCAAGGGAAACGCGAGTGGGCTAA
TTTGCACCTGCACCTTGTGCCGACAGGTTGGAGGGATGCTCAAGGGAAGC
GATGGAGCGCGCTGCTCGAAACGGGCACCTGGAGGTGGTGAAGCTGCTTC
ACGACATAGGAGCGACCTGCACGTCAACGGCTGTTCACCTAGCTCAAGTG
CACGGGCACCACGGTGTCTACCGCTTCCTCAACACTATGTACCCTGGGAA
GGTAATCTGGGTGGAATCATGGGAGTTGGACTGAGCACTATCGAGCCAGA
CTTGAATCGAAAACGGTGTTCCTTTCCATCATTTTACGAGGTGGCAAATT
TCCAAGAGATGTTCCCGTAAACAGTTGATAGTATCGTATTGAGACAGTGG
CAAGCGCCACGTGTGAACACTCCAAGATTTTCAAGCCATCGTCAGGCGTT
TGTGCCACAGTCTGTCGTTTATTGAAAATGTTCCCCAAGATGTGAACAAA
CGGGTAGAGGGGGGGGGATCTCACGGACAAACCCTCTTGGAACGGGCAGT
TGTGACCCACTATCCGTCTACCCCTAGCACACGAGAAAACGCTTTGCTTG
TCTGTTGGATAATAGCAGCAACCGTCTTTGGTACCGATGATTTCAGTAGC
TCGGCGACAAGGAAGCAATATTCTTCTATCCAACTAACACATTTCGTTGA
CCATGTGCACTCAATATTAAATTAACAATACGTTCATGGTGAGGGTGATT
GGGGTGAGGTCGCTGCGGATGGTGTGTAAAGGTTCTTATTTGCAAAGGTT
ACCCCTCTAGGGGAGCACGGCGTTTCAACCACATTTTCAGCTGCTTCTTT
TTTTCTGGCGGGGACACGTTAGCGGAGAGGTAGGTGCAACATGCATCCTT
TTGCCGCAGCTTGGCACGAGACGATAGGTTTACCCCCGTAAGACAACATC
TTCGGGGGCGCACTCACGCTGCGCCATTAGTCAGAAACGCGGTGCTCACA
TTTTTACCAACAGTACCCAGGAACGATCAAACCGACGTATGTGTTCGACG
GCAGTAGGTGTTCCAGCGTTGTATTGGCGGTTGAGTCGTGCACGCCCAAA
CAATGCACCTTTGGGCTTCTACGTGCCAGACGTTCGAACAAGTACACATT
TCCGAAACGATTGCGCCCATGCGCTGTTTTTTCCGACATCGCGGAAGAAG
CGTACGATACAACACAAACGTTGGTAACTTTTCAATGGATCAAACCCGAC
CTTCTCAGGCATCACCGTTCGACGCATTCTCAGACCCGACCGTGGTGGCG
GAGCAGGAGATGGTGGATCAGGACAAATGCTTGGACTTGGTGGTGCAACG
AGTGAGAACCATACGTCGCAATAAGATCAGGGTCGATCGTGGTGTACACA
TGAGCAGATTCGGTTGGAATTAAAGCCGTGGTTCATCATCAGTGCAGTGA
AGTGCGTACACTAACACCGGGTGGTCCTAGCGTGATTATGTGTTCCCTGA
TAACGAGAATAGCTGGGAACATTTCGCAATTCCTGTTCTATGGAAAGTAG
TCCTGGGCGCTTTGAAACGTGCACGACTTAGGACTCGAGTAGGCATCAAC
CTGTCTTGTGCTCCGTTCCTCACGGCGTCAAAGCGAAGAAGGCCGTCCTG
GTTTCTGGGTACTCGTTTTGGCGCACGAACCATCTCGCAGGTCTCCGCTT
GAGAACCTCCATCTTTTCGTTACAACTATGGTAGTGGTTTTCTTCTTGGC
CTTCCAAGTTGTCCATCGCTTGTTGGGCAGGATGGGCCAGAGCGATACGT
TTCGCAAGATGCCGCCTGACTGTTCCTTTCTTTCCGCGCCTTCTCTTTTA
CCGCGCTCCCAATTATGATGTTATTCATCGGCTTCGACACCTCGTTCGCT
TCACCAGGAGGCGCGGCGGCGGCGGCAATCCGTCATCTTTGCTGACACGG
TCGAAGCGTCGGAATCTCGACGTCGGGCGTCGCTACCGATACCATTTGGG
CACAATGGGAAGCCGGCACTCAGCCGCATTAATACGTTCGGGCTGTAGCC
TGTCAAATGTTTGTGAATCCCGTAGATTTGTGGCCGTTTCCCTTCTCGGT
AGGTGGTTGTTCACCCGGTCAAACCTACATTTTGCCCGTACTACTGGCTG
GAATAACTGTTTTCCGCGAGATAAGATAACGTTTCGTCATGGCGCATTGC
CATTTCCCCCTTTTCGCCGGAAGGTGAGATCTCTGAGGCAGTGTATACTT
TATCACGGCTGTTCCGCTAGAACAAGGGAGGAACGATAGAAAGGCTGGAA
CGGTAGAGTTAACGCAAGATGCTTACCCCCGTTTGGTGCTGTGTTGTTCT
TTTTCGTTGACGGAAGCATGCACGATTTTCATGGGAAGTACAAATTTGTG
GTGTGTACACCATCGTGTTTTTGGCGTCGGTAGCTCTGCGGATGTTTGTT
TGTTCCTTCTGTATGTCTTCCGAGTCGATCCGATCCTGCTTCGCGCAAGT
TTGCTCGTGTATTGCAAATCAAATAGATTTAATTCGCAAGGCAAACCTAG
CAGGCGGCTTCGCTTCGCGAGCGCTGGGTGAGCTGTTGAATGTTCATGGT
GTACTTTTGGAATTTGCAAGGTCATTGGTTAAATATGATGTATTGAAGTG
CAAGGCGGGCCTGGCAGAACAACTGTGCGCAGCACATGGCATATTTTGCT
TGGAAAAGCAAGAACTTACAGTAGAGAGAATACGATATACTGCATAAGAA
GCACGGTCGTGTCTCCTAGACTACTGTGTTGGTGGAGTACATACCCATTC
TTCACATGGCTTCCTTTCGCCTTTATATGGACACCTCTTGCTCCCATTCT
CCCCTCGTCCTGCCACTATCTGCCTCTTTGTTAAGGCAACTCCGGTTTTT
ATGCCATTTGTTCATAAAGGGTTTTAGCTTGCTGCCGCTGAGAGTCATGA
TCCAGGTCGAAATAATTAAGCGGCCGGCGAAGCGTATACCACGTGTGGTC
CTCCTGAACGACTCAGGAGGGATGATTTTTTTGTTTTGCTGCCGAC back to topCoding sequence (CDS) from alignment at chr_00:1342680..1353025- >Ec-00_001040.3 ID=Ec-00_001040.3|Name=Ec-00_001040.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1482bp|location=Sequence derived from alignment at chr_00:1342680..1353025- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGAAAACCATCAAAGGGGGATTCCGCTACTCTGTGGATGCGATGGATCG TGCAGCAAGAGGAGGTCATCTCGACGTCGTCAAGTTTCTTTGTCAACAGG GCCAGAAATGCACAACGGAAGCTATTGATGGTGCTGCAAAGGAGGGGCAT TTAGAGGTTGTCGTCTGGCTTCATCGAAACACAAGTGCTGGGGCAACCAA GGCAGCGATGGATTATGCTGCTGCGAACGGTTTTTTGCCAGTGGTGCAGT GGCTGCATGGCAACAGGCGTGAAGGATGCACGGTCTCGGCCATGAATTGG GCCGCGGAGAACGGCCATTTATCGGTGGCACAATTTCTGCACCACAACAG GCGCGAAGGCTGCACGACTGCCGCTTTCGATCGCGCCGCGATGAACAACC ATGTGCACGTCATCATGTGGCTCACCGAAAACCGTAGCGAGGGAGGCACC GAGAGCGCCCTGCAATGGGCAGTGAGTAGGGGGCACACAAAGATGGTTGC CCTTTTGTTGGCACCGAGGAAGGACAGCGGCAGTGAAGGTGTTGCTCTGA AAACGCGGGGCTCAAATACGAGCGTCACCAGCATCAATTCACTTGACAGT CTAGGGCTCGGCCTGGACAGCCCCACCCTCAGCATTGCCCATGGCAATGG GCACTTCGGCTTTAGCTGTTCCAAGTTCGCCATGGATAAGGCAGCACAGG GAGGACACATTGATGTGCTCCAACTACTGCACGACCAGGGCCATGAGTGT ACGACCAACGCCATGGACTGGGCTGCGGCGTTCGGAAAAACGGAGACAGT CAAGTGGCTCTCCGAGAATCGCGAAGAAGGGTGCACGAAAGACGCAATGG ACCACGCGGCAGCTGGCGGGCACCTGGAGACGGTCAAGTGGTTGCACGAA AACAGAAGAGAAGGGTGCACGCGCTTCGCCTTGACTGATGCTGCGGGCAA CGGTCACATGGAGACAGTCGAGTGGCTTCACCGAAAACGACCCGAGGGGT GCGGTCGCCGGGCAATGGATGATGCCGCTGCAAACGGGCACGTTGAGATG GTTCGCTGGCTTTATGACAACAGGTTGGAGGGATGCTCAAGGGAAGCGAT GGAGCGCGCTGCTCGAAACGGGCACCTGGAGGTGGTGAAGCTGCTTCACG ACATAGGAGCGACCTGCACGTCAACGGCTGTTCACCTAGCTCAAGTGCAC GGGCACCACGGTGTCTACCGCTTCCTCAACACTATGTACCCTGGGAAGGC ATCACCGTTCGACGCATTCTCAGACCCGACCGTGGTGGCGGAGCAGGAGA TGGTGGATCAGGACAAATGCTTGGACTTGGTGGTGCAACGAGAGGCGCGG CGGCGGCGGCAATCCGTCATCTTTGCTGACACGGTCGAAGCGTCGGAATC TCGACGTCGGGCGTCGCTACCGATACCATTTGGGCACAATGGGAAGCCGG CACTCAGCCGCATTAATACGTTCGGGCTGTAG back to top
Synonyms
The feature 'Ec-00_001040.3' has the following synonyms
Synonym |
Esi0013_0026 |
Esi_0013_0026 |
|