Ec-00_001000.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_001000.1
Unique Name	Ec-00_001000.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	706

Homology

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BLAST of Ec-00_001000.1 vs. uniprot
Match: D8LE55_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE55_ECTSI)

HSP 1 Score: 815 bits (2105), Expect = 3.490e-288
Identity = 436/496 (87.90%), Postives = 436/496 (87.90%), Query Frame = 1

Query:  841 VQAEVEAKFAAEQQNEDVMLRKIQAQ------------------------------------------------------------GEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH 2148
            VQAEVEAKFAAEQQNEDVMLRKIQAQ                                                            GEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH
Sbjct:   19 VQAEVEAKFAAEQQNEDVMLRKIQAQVINTKTYAFILGLAKDTWCRCLFLLNRRLACTLLGRNPVDSNGFGNMRTEVTSSLPSESLGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH 514

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BLAST of Ec-00_001000.1 vs. uniprot
Match: A0A6H5JZK9_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK9_9PHAE)

HSP 1 Score: 642 bits (1656), Expect = 4.160e-220
Identity = 372/519 (71.68%), Postives = 388/519 (74.76%), Query Frame = 1

Query:  841 VQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRL----------------------------------------------------------------AACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDS------LLF----PIPDRKSR------AQLLV---QYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH 2148
            VQAEVEAKFAAEQQNEDVMLRKI+AQGEEDRRRTQEAINTVLAHLASAVYGLVSDPR A     W          L+       QLLETYLGKPSLVRETSRVGTLRSTNH LLH AKCL+ F C+KAGKASLEGEGWSPKRTRSGREEA+NAFRDVVLAPDLKEQVLSLAVATRN+KRNGAPYRHLLLYGPPGTGKTMVAKRL                                                                AA SGMDCAVMSGGDVAPLGKNAVTELH LFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE +++  L+    +      LLF     + DR         ++LLV   QYFHKYCATGKDG SI  GWGL SK+S WWRGSSAEGLTIDVGVDE LVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDG+VTADMIKRVATQKAKEHGAKV MRAATEH
Sbjct:   18 VQAEVEAKFAAEQQNEDVMLRKIKAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRWAKK--PW---------TLEASMRRTGQLLETYLGKPSLVRETSRVGTLRSTNHCLLHVAKCLISFKCKKAGKASLEGEGWSPKRTRSGREEAMNAFRDVVLAPDLKEQVLSLAVATRNAKRNGAPYRHLLLYGPPGTGKTMVAKRLVSGLSNLSRSLEDGLDADPCCWNPSKRMLPRLFRHLSEFPRQGCQERLSKHSFTGTMRKTSCFQAAYSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE-VNKHQLEVSSTAPGPGGHLLFIRSIVLHDRTVLLLVHVVSRLLVSLSQYFHKYCATGKDGSSIDTGWGLFSKLSRWWRGSSAEGLTIDVGVDECLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGMVTADMIKRVATQKAKEHGAKVNMRAATEH 524

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BLAST of Ec-00_001000.1 vs. uniprot
Match: A0A835Z4U6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U6_9STRA)

HSP 1 Score: 362 bits (929), Expect = 3.450e-112
Identity = 212/409 (51.83%), Postives = 261/409 (63.81%), Query Frame = 1

Query:  922 EEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCAT----GKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSE-DGVVTADMIKRVATQKAKEHGAKVKMR 2133
            EEDR+R  EA+ TV  HLA+ V  L+SDP +A  + +WLLGL AGY +L+E   L  +++   LG+PSLVRETSR                                  GW  K      E+A             KEQVLSLA ATRN+++N AP+RHLLLYGPPGTGKTMVAKRLAACSGMD A+MSGGDV PLGK+AVTELHSLF WA +S RG+LLFIDEAEAFLG RS   +SE TRNALNALLY TG+AS   M+VLATNRAEDLDEAVLDRMDDSLLFP+PD ++R QLL  YF  Y A+      DG   G  W +       W G  A  +T+D G+ E  V    ++V+GFSGRE+ KL+L +Q+  +GS  +  +T  +++RV   KA EH  K+++R
Sbjct:  120 EEDRKRVLEAVRTVFEHLATGVVVLLSDPMKAAAVAAWLLGLAAGYFILREAIGLCGRVISARLGRPSLVRETSR----------------------------------GWHRKS-----EDAA------------KEQVLSLATATRNARKNRAPFRHLLLYGPPGTGKTMVAKRLAACSGMDYAIMSGGDVGPLGKDAVTELHSLFAWARRSKRGVLLFIDEAEAFLGSRSSSTLSEDTRNALNALLYQTGTASHSFMLVLATNRAEDLDEAVLDRMDDSLLFPLPDVEARRQLLALYFRSYIASLVASPDDGERQGLRWLVR------WGGGCAGRITVDAGIGEDQVCSFTKQVEGFSGREISKLLLSLQNAVFGSGGEHRLTKRLMERVFELKAAEHRRKLELR 471

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BLAST of Ec-00_001000.1 vs. uniprot
Match: A0A7S1TQP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQP8_9STRA)

HSP 1 Score: 328 bits (841), Expect = 5.360e-96
Identity = 234/680 (34.41%), Postives = 345/680 (50.74%), Query Frame = 1

Query:  100 LYHNVIPADTADCLDKVTALPLATYEIKHDSVKGRRHLGPVGPGLEKAIPESVQIHGRSTYPSPNRGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAFDARMHMAVDEMGMRLAEEADAQLLERKRIVEAEAEEAHLAAELEAIEXXXXXXXXXXXXXXQREALEQQLEIARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAA 2139
            LY NV P D     + ++ L +A +E ++DS+KGRR +G +   ++  IPE++ +    T+P    G   I LE    V+K V+FM+NVAA+Q +A   +   A L + L    +M +  +E+  RLA EADAQ +ER+++ EAEAE+A L                      + + L+++ E+AR +                                                            +          ++ +D+            R+R  E ++T++  L +AV+ ++ +P R       ++GL+A  MV +E + ++R+L+E  +G+P L+RETS  G   S   RLL      V  + +  G       G S       RE     F DVVL    KE+V+  A  ++ ++   AP R++LLYGPPGTGKTMVA+RLA  SG+D A+MSGGDVA +G ++V +LH+LF WA +SP+GLLLFIDEAEAFL  R+R  MSE TR ALNALLY+TG+AS R  +VLATNRAEDLD AVLDRMDDS+   +P+   R  +L QY  +     +D     AG      + G  R    EGLT D  VD+  +K     ++ FSGRE+ K +  + S A  +    +T ++  ++   K  EH  K +M  A
Sbjct:   60 LYQNVEPVDVEKSRELLSKLQIAHFEFEYDSIKGRRQVGLLPEDVQDVIPEAIDVAATRTFPPQEPGGKMIKLEQFPSVNKDVVFMHNVAAIQAIATSLKIATADLSQLLEHREQMDVLYEELHRRLALEADAQAVERRKLAEAEAEKARLQVAXXXXXEDEGARILAARESAEEKRLQREDELARERAVLADLSERNRTLEALAMQRETAEAAAQQALERAKELSERRTLLERKLEEKKREADVSRAEXXXXXXXXLLRETKDIREXXXXXXXXXXRKRLLETVSTIMDRLGNAVFYVLEEPSRVFAFVMSIVGLVAVTMVSREASAMVRRLIEASIGRPQLLRETSVSGGWLS---RLLRILGLYV--VVDLFGSLLAFFRGGSVTE----RESVEAHFADVVLPELTKERVILAARISKGARHMKAPLRNVLLYGPPGTGKTMVARRLAEASGLDYAIMSGGDVAAVGSDSVRQLHALFNWANRSPKGLLLFIDEAEAFLASRARA-MSEETRAALNALLYHTGTASSRFCLVLATNRAEDLDSAVLDRMDDSMNIALPEAPQRQAILTQYMLQSFKPWEDAPEGKAG-SSGLFVRGIRRLPVGEGLTQDE-VDKAALK-----MKRFSGREISKTVSSLYSAALCASGSKLTLELFWQLLHDKLDEHAEKERMLGA 722

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BLAST of Ec-00_001000.1 vs. uniprot
Match: A0A329SI18_9STRA (AAA domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A329SI18_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.530e-94
Identity = 247/697 (35.44%), Postives = 355/697 (50.93%), Query Frame = 1

Query:  106 HNVIPADTADCLDKVTALPLATYEIKHDSVKGRRHL-GPVGPGLEKAIPESVQI-HGRSTYPSPNRGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAF---DARMHMAVDEMGMRLAEEADAQLLERKRIVEAEA-------EEAHLAAELEAIEXXXXXXXXXXXXXXQREALEQ---QLEIARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSR----VGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRS--RPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMR 2133
             NV  A+ ++ L+ ++ L L  YE K+DSV GR  L G +GP L    PE VQ+   R  +    RG+  I L++  VVDK  ++M+N+ A Q+L      +  Q EE LA           +DE+   L +EA AQL++++ I EAE        EEA +  E E  +              ++ ALE    Q E A R+                 XXXX                                         +VE +   ++ N+D+ + ++Q + E DR +  +A+     +L   +  L++D  +        + L AG  + +E   ++ +L+E  LGKPSLVRETSR     G LR+           L+R                  ++   G++E      DVVL   L+ +VL +A +TRN+  +GAPYRHLLLYGPPGTGKTMVAKRLA  SGMD A++SGGDV PLG +AVTELH+LF+WA  SPRG+L+FIDEAEAFLG R+  +  MSE  RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL  YF++Y A             L+ K+        A    +   +D  ++    +   G SGRE+ K+ML +QS  Y  +   VT  ++ RV  +K  EH  K++++
Sbjct:   58 QNVQEANVSESLELLSKLSLKRYEFKYDSVAGRTTLLGVLGPDLRSIAPEVVQVLPERYVFDRDGRGK--IALQDFHVVDKDALYMHNLGATQQLILN---LNRQEEEILALRQLTVVQQKKIDELQGYLEQEASAQLVQKRLIAEAELAQTEKLIEEAQVRGEEER-KTLDVKRDHELQVESEKHALEHXXMQXEDAARR---------DQNRDLVQXXXXSNLRIERSRRETEEVLKEKQLAADHARALLERNTTLEKAAIDVEGRIRQQRANQDIEMAQLQQRLEVDRLKLLQALQATFDNLGQGISVLLADKEKLTKFVGGFVALAAGIYLSREAIRIVGKLIEQRLGKPSLVRETSRSSGAFGFLRA-----------LIR------------------RKPAKGQDE----LADVVLRSSLETRVLEIARSTRNAVLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANASPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPEGKERVRLLQMYFNQYVAHLAASPDAAKSTTLTGKVD------KASVSALPPVLDASVMAQYGDMTTGMSGREIAKMMLYMQSIVYAQDQVAVTLKLVDRVVKEKVDEHKRKLELK 700

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BLAST of Ec-00_001000.1 vs. uniprot
Match: K3WQW0_GLOUD (AAA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQW0_GLOUD)

HSP 1 Score: 321 bits (822), Expect = 5.690e-94
Identity = 233/684 (34.06%), Postives = 336/684 (49.12%), Query Frame = 1

Query:  109 NVIPADTADCLDKVTALPLATYEIKHDSVKGRRHLGPVGPGLEKAIPESVQ-IHGRSTYPSPNRGEPPITLENQAVVDKSVIFMNNVAAVQE-LAERNEAMRAQLEEQLAFDARMHMAVD-----EMGMRLAEEADAQLLERKRIVEAEAEEAHLAAELEAIEXXXXXXXXXXXXXXQREALEQQLEIARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRS--RPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMR 2133
            NV PA+ +   D +  LP+  ++ K+D+  GR  LG +G  L++  P+ VQ +  R  + S  +    I L+N  VVDK  +FM+N+AA Q  + E+ E      +EQ   DAR  MA+      E+   L +EA  QL+E+++I EAE   A    E   +                 E    + ++A++++                                                             +VE +   ++ N+D+ + ++Q + E DR +  +A+     +L      L+SD  +        + L AG    +E   ++ +L+E  LGKPSLVRETSR   L                               WS  + ++      N   DVVL   L+ +VL +A +TRNS  +GAPYRHLLLYGPPGTGKTMVAKRLA  SGMD A++SGGDV PLG +AVTELH+LF WA  SPRG+L+FIDEAEAFLG R+  +  MSE  RNALNALL++TG+ SR  M+V+ATNR EDLD AV DR+DD+L F +P+   R +LL  YF +Y         +G     +    G  + +S   L          +K      +G SGRE+ K+ML +QS  Y  ++ VV   +I RV  +K  EH  K++++
Sbjct:   55 NVRPANASHSYDLIRKLPIKHFQFKYDANAGRTQLGCLGEELQEVYPDGVQFVPKRFVFDSEKQR---IALQNLYVVDKDSLFMHNLAATQVVIGEQQE------QEQDLHDARQTMAIHHERLVELQAYLDQEASVQLIEKRKITEAEVVHAEKLIEEARVRGEEERQTLELKRKNNLEVETTKHQLAQQRLEEEDAARLKQNRDLVALQEESNMRMEIKRRETEEVLKEKHLAADHQRALLEHNTTLEKAVIDVEGRIRQQRLNQDIEMAQLQQRLEADRVKLIQALQVTFDNLGQGAVVLLSDKEKLTKFIGGFVALAAGIYFSREAIRIIGKLIEQRLGKPSLVRETSRGSGLWGFFRAFFPY---------------------WSKSKGKN------NEMADVVLHASLETRVLDIARSTRNSILHGAPYRHLLLYGPPGTGKTMVAKRLAKSSGMDYAILSGGDVGPLGSDAVTELHALFNWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQSRHFMLVIATNRPEDLDIAVTDRIDDTLHFNLPEESERVRLLQMYFDEY---------VGHMTAPAGSAKGDKQSNSVNPLNATA------MKQYGAMTEGMSGREIAKMMLYLQSIVYAQDEVVVMPKLIDRVVREKVDEHKRKLELK 687

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BLAST of Ec-00_001000.1 vs. uniprot
Match: A0A662XUE1_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUE1_9STRA)

HSP 1 Score: 320 bits (819), Expect = 2.800e-93
Identity = 242/702 (34.47%), Postives = 348/702 (49.57%), Query Frame = 1

Query:   61 FLCSASAEEDAQALYHNVIPADTADCLDKVTALPLATYEIKHDSVKGRRH-LGPVGPGLEKAIPESVQI-HGRSTYPSPNRGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAFDARMHMAVDEMGMRLAEEADAQLLERKRIVEAEAEEAHLAAELEAIEXXXXXXXXXXXXXXQREALEQQLE-----IARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRS--RPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCA--TGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMR 2133
            F  + + E+ A AL  NV  A+ ++ L+ +T L L  +E K+DSV+GR + LG +GP L    PE+VQI   R  +    RG+  I L++  VVDK  ++M+N+ A Q+L  +    + +L +           +DE+   L +EA AQL++++ I EAE     LA   + IE               +   E QLE     +A++++                                                             +VE +                   E DR +  +A+     +L   V  L++D ++        + L AG  + +E   ++ +L+E  LGKPSLVRETSR              A   +R +  +    S +G+               N   DVVL   L+ +V  +A +TRN+  +GAPYRHLLLYGPPGTGKTMVAKRLA  SGMD A++SGGDV PLG +AVTELH+LF WA  SPRG+L+FIDEAEAFLG R+  +  MSE  RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL  YF++Y A  T     +     G  +K       S A    + V  D  ++    E   G SGRE+ K+ML +QS  Y  ++ VVT  ++ RV  +K  EH  K+ ++
Sbjct:   52 FTANVTVEQYADAL-TNVQDANLSESLELLTKLALKRFEFKYDSVEGRANQLGLLGPELRAVAPEAVQILPERFVFDRDGRGK--IALQDFHVVDKDALYMHNLGATQQLILQQRGHQQELLQLRKLTEVQQQKIDELQGYLDQEASAQLVQKRLIAEAE-----LARTEKLIEETRVRGEEERATLDLKRDHELQLEAEKHALAQQRLQEDDAARRDQNRDLVQLQEESNVRMERTRRETEEVLKEKQLAADHVRALLEQNTTLEKASIDVEGRIXXXXXXXXXXXXXXXXXXEADRVKLMQALQATFDNLGQGVAVLLADKQKLTKFVGGFVALAAGIYLSREVIRIVGKLIEQRLGKPSLVRETSRSS-----------GAWGFIRALFRRN---SAKGQ---------------NELADVVLRDALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFHWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPEAKERVRLLQMYFNEYVAHLTAPPAPAAAKEAGSFAKPD-----SKAAVGALPVLADATIMAQYGELTHGMSGREIAKMMLYLQSIVYAQDEVVVTPKLVNRVVNEKVDEHKRKLDLK 711

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BLAST of Ec-00_001000.1 vs. uniprot
Match: A0A225WZW4_9STRA (AAA domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZW4_9STRA)

HSP 1 Score: 318 bits (816), Expect = 3.320e-93
Identity = 232/702 (33.05%), Postives = 348/702 (49.57%), Query Frame = 1

Query:   61 FLCSASAEEDAQALYHNVIPADTADCLDKVTALPLATYEIKHDSVKGRRHL-GPVGPGLEKAIPESVQI-HGRSTYPSPNRGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAF---DARMHMAVDEMGMRLAEEADAQLLERKRIVEAEAEEAHLAAELEAIEXXXXXXXXXXXXXXQREALEQQLEIARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRS--RPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATE 2145
            F    + E+   AL  NV  A+ ++ L+ ++ + L  YE K+DSV+GR  L G +GP L    PE VQ+   R  +    RG+  I L++  VVDK  ++M+N+ A Q+L      +R+Q EE LA     +     +DE+   L +EA AQL++++ I EAE  +     E   +               + +   ++  + ++++                                                             +VE +                     DR +  +A+ +   +L   V  L++D ++        + L AG  + +E   ++ +L+E  LGKPSLVRETSR              +   + F+     + S +G+               N   DVVL   L+ ++L +A +TRN+  +GAPYRHLLLYGPPGTGKTMVAKRLA  SGMD A++SGGDV PLG +AVTELH+LF+WA  SPRG+L+FIDEAEAFLG R+  +  MSE  RNALNALL++TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL  YF++Y A       +      S+ I    +   A    +   +D  ++    E   G SGRE+ K+ML +QS  Y  ++ VVT  ++ RV  +K  EH  K++++  TE
Sbjct:   21 FTADVTVEQYKDAL-QNVQDANVSESLELLSKISLKRYEFKYDSVEGRTALLGVLGPELRAVAPEVVQVLPERFVFDRDGRGK--IALQDFHVVDKDALYMHNLGATQQLILD---LRSQEEEILALRQLTSIQQQKIDELQGYLEQEASAQLVQKRLIAEAELAKTEKLIEEAQVRGTEERTTLDLKRDHELQVENEKHALEKKRMVEDDAARRDQNRDLVQLQEESNIRIERARRETEEVLTEKQLAADHARALLERNTTLEKAAIDVEGRXXXXXXXXXXXXXXXXXXXXXDRVKLMQALQSTFDNLGQGVSVLLADKQKLTKFIGGFVALAAGVYLSREVIRIVGKLIEQRLGKPSLVRETSR--------------SSGALGFLSALFRRKSAKGQ---------------NELADVVLRSTLETRILEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQSKKFMLVVATNRPEDLDNAVTDRIDDTLHFDLPEAKERVRLLQMYFNEYVA------HLAGQPASSNSILSTGKLEKASVSVLPPVLDANVMSQYGEMTTGMSGREIAKMMLYMQSIVYAQDEVVVTPKLVNRVVQEKVDEHKRKLELKTYTE 681

[Close]

BLAST of Ec-00_001000.1 vs. uniprot
Match: G4ZNZ6_PHYSP (AAA domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZNZ6_PHYSP)

HSP 1 Score: 319 bits (817), Expect = 3.610e-93
Identity = 257/703 (36.56%), Postives = 368/703 (52.35%), Query Frame = 1

Query:   61 FLCSASAEEDAQALYHNVIPADTADCLDKVTALPLATYEIKHDSVKGRR-HLGPVGPGLEKAIPESVQI-HGRSTYPSPNRGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAFDARMHMAVDEMGMRLAEEADAQLLERKRIVEAEAEEAHLAAELEAIEXXXXXXXXXXXXXXQREALEQQLEIARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSR----VGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRS--RPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATE 2145
            F  + + E+   AL  NV  A+ ++ L+ ++ L L  YE K+D+V GR   LG +GP L    PE VQI   R  +    RG+  I L++  VVDK  ++M+N+ A Q+L     A + ++ +           +DE+   L +EA  QL++++ I EAE  +A    E   +               + +             XXXXXXXXXXXXXXXXXXXX                                         +VE +   ++ N+D+ + ++Q + E DR +  +A+ +   +L   +  L++D ++        + L AG  + +E   ++ +L+E  LGKPSLVRETSR     G L++   R  +AAK                           G++E      DVVL   L+ +V  +A +TRN+  +GAPYRHLLLYGPPGTGKTMVAKRLA  SGMD A++SGGDV PLG +AVTELH+LF+W   SPRG+L+FIDEAEAFLG R+  +  MSE  RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL  YF++Y A      +     G   K S      SA    +D  V  +      E   G SGRE+ K+ML +QS  Y  ++ VVT  ++ RV  +K  EH  K++++   E
Sbjct:   41 FTANVTVEQYKDAL-QNVEAANLSESLELLSKLSLKRYEFKYDTVVGRSTQLGVLGPELRTVAPEVVQILPERFVFGRDGRGK--IALQDFHVVDKDALYMHNLGATQQLILNLRAQQEEILQLRQLTGVQQQKIDELQGYLEQEASEQLVQKRLIAEAEVAKAEKMIEEARVRGKEERKTLDRKRDHELQVENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNIRIERTRRETEEVLKEKQLAADHARALLERNTTLEKAAIDVEGRIRQQRANQDIEMAQLQQRLEADRVKLMQALQSTFDNLGQGISVLLADKQKLTKFVGGFVALAAGIYLSREAIRIIGKLIEQRLGKPSLVRETSRSAGAFGFLKALFRR--NAAK---------------------------GQDE----LADVVLRNALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWTNSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPETKERVRLLQMYFNEYVAPLAVSPAATDCKGKPDKAS-----VSALPPVLDASVMTQY----GEMTTGMSGREIAKMMLYMQSIVYAQDEVVVTPKLVDRVVKEKVDEHKRKLELKNYNE 698

[Close]

BLAST of Ec-00_001000.1 vs. uniprot
Match: V9EJ63_PHYPR (AAA domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EJ63_PHYPR)

HSP 1 Score: 319 bits (817), Expect = 3.790e-93
Identity = 248/712 (34.83%), Postives = 360/712 (50.56%), Query Frame = 1

Query:   61 FLCSASAEEDAQALYHNVIPADTADCLDKVTALPLATYEIKHDSVKGRRHL-GPVGPGLEKAIPESVQI-HGRSTYPSPNRGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAFDARMHMAVDEMGMRLAEEADAQLLERKRIVEAEA-------EEAHLAAELE--AIEXXXXXXXXXXXXXXQREALEQQLEIARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSR----VGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRS--RPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATE 2145
            F  + + E+   AL  N+  A+ ++ L+ ++ L L  YE K+DSV GR  L G +GP L    PE VQ+   R  +    RG+  I L+N  VVDK  ++M+N+ A Q+L         ++             +DE+   L +EA  QL++++ I EAE        EEA +  E E   ++     XXXXXXXXX         E A R+                                                              +VE +   ++ N+D+ + ++Q + E DR +  +A+     +L   +  L++D ++        + L AG  + +E   ++ +L+E  LGKPSL+RETSR     G LR+               I +K  K               G++E      DVVL   L+ +VL +A +TRN+  +GAPYRHLLLYGPPGTGKTMVAKRLA  SGMD A++SGGDV PLG +AVTELH+LF+WA  SPRG+L+FIDEAEAFLG R+  +  MSE  RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL  YF++Y A      +  A   L  K+        A    +   +D  ++    +   G SGRE+ K+ML +QS  Y  +   VT  ++ RV  +K  EH  K++++  T+
Sbjct:   43 FTTNVTVEQYKDAL-QNIQDANVSESLELLSKLSLKRYEFKYDSVAGRTTLLGVLGPELRSIAPEVVQVLPERYVFDRDGRGK--IALQNFQVVDKDALYMHNLGATQQLLLNFNRQEEEILALKQLTVAQQQKIDELKGYLEQEASVQLVQKRLIAEAELAQTEKLIEEARVRGEEERKTLDLKRDHXXXXXXXXXXXXXXXXXXEDAARR---------DQNRDLVQLQEESNVRIERARRETEEVLKEKQLAADHARALLERNTTLEKAAIDVEGRIRQQRANQDIEMAQLQQRLEADRVKLMQALQATFDNLGQGISVLLADKQKLTKFVGGFVALAAGIYLSREAIRIIGKLIEQRLGKPSLIRETSRSSGAFGFLRA--------------LISQKPAK---------------GQDE----LADVVLRSSLETRVLEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPETKERVRLLQMYFNEYVA---HLAAPPATVTLKGKVD------KASVSALPPVLDASVMTQYGDMTSGMSGREIAKMMLYMQSIVYAQDQVAVTLKLVDRVVKEKVDEHKRKLELKNYTD 700

The following BLAST results are available for this feature:

BLAST of Ec-00_001000.1 vs. uniprot

BLAST of Ec-00_001000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE55_ECTSI	3.490e-288	87.90	AAA domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JZK9_9PHAE	4.160e-220	71.68	AAA domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A835Z4U6_9STRA	3.450e-112	51.83	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A7S1TQP8_9STRA	5.360e-96	34.41	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
A0A329SI18_9STRA	1.530e-94	35.44	AAA domain-containing protein n=10 Tax=Phytophthor...	[more]
K3WQW0_GLOUD	5.690e-94	34.06	AAA domain-containing protein n=1 Tax=Globisporang...	[more]
A0A662XUE1_9STRA	2.800e-93	34.47	AAA domain-containing protein n=2 Tax=Nothophytoph...	[more]
A0A225WZW4_9STRA	3.320e-93	33.05	AAA domain-containing protein n=1 Tax=Phytophthora...	[more]
G4ZNZ6_PHYSP	3.610e-93	36.56	AAA domain-containing protein n=3 Tax=Phytophthora...	[more]
V9EJ63_PHYPR	3.790e-93	34.83	AAA domain-containing protein n=6 Tax=Phytophthora...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1299264..1310041 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	820.1
Seed ortholog evalue	8.1e-235
Seed eggNOG ortholog	2880.D8LE55
Length	2764
KEGG ko	ko:K17681
Hectar predicted targeting category	signal peptide
Gene id	Ec-00_001000.1
EggNOG free text desc.	mitochondrion organization
EggNOG OGs	COG1223@1,KOG0742@2759
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03029

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001000	Ec-00_001000	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 1299264..1310041 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001000.1.1	Ec-00_001000.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1299264..1299411 +
Ec-00_001000.1.2	Ec-00_001000.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1299861..1300010 +
Ec-00_001000.1.3	Ec-00_001000.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1301610..1301726 +
Ec-00_001000.1.4	Ec-00_001000.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1302142..1302245 +
Ec-00_001000.1.5	Ec-00_001000.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1302518..1302719 +
Ec-00_001000.1.6	Ec-00_001000.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1303401..1303505 +
Ec-00_001000.1.7	Ec-00_001000.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1303957..1304049 +
Ec-00_001000.1.8	Ec-00_001000.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1304637..1304728 +
Ec-00_001000.1.9	Ec-00_001000.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1304957..1305041 +
Ec-00_001000.1.10	Ec-00_001000.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1305433..1305675 +
Ec-00_001000.1.11	Ec-00_001000.1.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1306057..1306170 +
Ec-00_001000.1.12	Ec-00_001000.1.12	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1306536..1306651 +
Ec-00_001000.1.13	Ec-00_001000.1.13	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1307526..1307685 +
Ec-00_001000.1.14	Ec-00_001000.1.14	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1308114..1308203 +
Ec-00_001000.1.15	Ec-00_001000.1.15	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1308472..1308657 +
Ec-00_001000.1.16	Ec-00_001000.1.16	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1309283..1310041 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001000	5UTR:Ec-00_001000.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 1299264..1299297 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001000.1	CDS:Ec-00_001000.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 1299298..1299411 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001000	3UTR:Ec-00_001000.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 1309430..1310041 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001000.1	Ec-00_001000.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 1299298..1309429 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:1299264..1310041+
coding sequence from alignment at chr_00:1299264..1310041+

mRNA sequence

>Ec-00_001000.1 ID=Ec-00_001000.1|Name=Ec-00_001000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=706bp
MIYAVVLAAFLCSASAEEDAQALYHNVIPADTADCLDKVTALPLATYEIK
HDSVKGRRHLGPVGPGLEKAIPESVQIHGRSTYPSPNRGEPPITLENQAV
VDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAFDARMHMAVDEMGMRLA
EEADAQLLERKRIVEAEAEEAHLAAELEAIEVEEAHRLTELEALQQREAL
EQQLEIARRKVAAESESKRVETEKALKIQEESTRRREALRLETESQLRKR
RMDLEQEMEAQKRQMDIERVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDR
RRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTL
LLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKA
SLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNG
APYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTEL
HSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGS
ASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKY
CATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEV
QGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMR
AATEH*

spliced messenger RNA

>Ec-00_001000.1 ID=Ec-00_001000.1|Name=Ec-00_001000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2764bp|location=Sequence derived from alignment at chr_00:1299264..1310041+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GTCGAGCCAGAATAAACGGTTCCTACAGAACGGTATGATTTATGCTGTGG
TTCTGGCAGCGTTCCTTTGTTCTGCCAGCGCCGAAGAAGATGCGCAGGCG
TTGTACCACAACGTGATCCCTGCGGACACGGCAGACTGTCTAGACAAGGT
CACAGCCCTGCCGTTAGCAACGTACGAGATCAAACATGACAGTGTCAAGG
GGCGGCGGCACCTGGGACCAGTAGGCCCGGGCCTTGAGAAGGCAATCCCC
GAGAGTGTGCAGATTCACGGGAGAAGCACATACCCATCTCCAAACAGGGG
AGAACCCCCCATCACCCTGGAAAATCAAGCTGTGGTCGACAAAAGCGTTA
TTTTCATGAACAACGTTGCTGCTGTCCAAGAGTTAGCCGAACGAAACGAG
GCTATGCGGGCGCAGCTGGAGGAGCAGTTGGCGTTTGATGCACGCATGCA
CATGGCGGTCGATGAAATGGGAATGAGACTAGCTGAAGAAGCAGACGCCC
AGCTGCTCGAGCGTAAGAGAATCGTGGAGGCCGAAGCAGAGGAGGCTCAC
CTGGCGGCAGAGCTAGAGGCTATCGAGGTGGAGGAGGCCCACAGACTAAC
GGAGCTGGAGGCTCTACAGCAGCGAGAAGCGCTGGAGCAACAACTTGAGA
TCGCTAGGCGAAAGGTTGCCGCCGAAAGCGAAAGCAAGAGAGTCGAAACG
GAGAAAGCGCTCAAAATCCAGGAAGAGTCTACGCGAAGGAGGGAAGCTCT
ACGTTTGGAAACGGAGAGCCAGCTTAGGAAACGAAGAATGGACCTGGAAC
AAGAAATGGAGGCCCAAAAACGTCAGATGGATATAGAGCGGGTACAGGCT
GAGGTGGAAGCTAAGTTTGCAGCGGAACAACAGAACGAAGATGTGATGCT
ACGGAAGATACAAGCTCAGGGTGAAGAGGACCGCAGGCGGACCCAAGAGG
CCATCAACACAGTCCTCGCGCACCTCGCATCTGCCGTCTACGGGCTCGTG
TCCGACCCTAGACGAGCGTTAACGCTGACCTCGTGGCTACTCGGTCTATT
GGCCGGGTATATGGTGCTGAAGGAGGGTACTCTTCTCCTCAGACAGCTCC
TCGAAACCTACCTCGGGAAGCCCAGCTTGGTGCGAGAAACTTCTCGTGTG
GGGACGCTGAGGTCGACCAACCACCGTCTTCTCCATGCAGCGAAATGTTT
GGTTAGATTCATCTGTGAGAAGGCCGGCAAGGCTTCTCTTGAGGGAGAAG
GCTGGTCACCAAAGAGAACGCGATCCGGGAGGGAGGAGGCTGTGAACGCT
TTCCGAGACGTCGTACTTGCCCCGGATCTCAAGGAACAGGTGCTTTCTCT
GGCGGTGGCGACGAGAAATTCCAAGAGGAACGGCGCTCCCTACCGACACC
TCCTGTTGTACGGTCCTCCCGGCACTGGAAAAACCATGGTTGCCAAGCGC
CTGGCCGCATGCTCTGGTATGGATTGCGCGGTGATGAGCGGTGGAGACGT
TGCCCCTTTGGGCAAAAATGCTGTCACGGAGCTTCATAGTCTCTTCCGTT
GGGCTGCCAAGTCGCCCAGGGGACTCCTACTGTTCATCGACGAGGCTGAA
GCTTTTTTGGGCAAGAGATCCAGACCTGACATGTCCGAGGGCACGAGGAA
CGCCCTTAACGCCCTGTTGTACAACACGGGTTCGGCTAGTCGCCGGCTAA
TGATGGTCTTAGCTACCAACAGGGCAGAGGATCTGGACGAGGCTGTTCTG
GACCGCATGGACGACTCCCTCCTGTTTCCTATCCCTGACAGGAAGTCTCG
AGCACAGCTCCTGGTCCAGTATTTCCACAAGTACTGCGCGACTGGTAAGG
ATGGCAGATCTATTGGCGCGGGTTGGGGTCTTTCCAGCAAGATCTCTGGG
TGGTGGCGCGGGAGCTCGGCCGAAGGACTGACGATCGATGTAGGGGTGGA
CGAACGCCTTGTTAAGGGACTCGCAGAGGAGGTGCAGGGCTTCAGCGGCA
GAGAGGTGGAGAAGCTTATGCTGGGGGTGCAGAGCTGTGCATACGGATCC
GAGGACGGGGTGGTGACGGCCGACATGATCAAGAGGGTCGCGACTCAGAA
GGCAAAGGAGCACGGTGCCAAAGTCAAGATGAGGGCGGCAACCGAACATT
AGGAAACCAGCCTTGAGAAATCTGCGGACGAGTTGGCAATAGCTGGCCTT
CTGGGGTTTCAGCACGGCTCACGGCGAGTCGCTTGTCGTCAAATAGAACA
GACAATGTTTTCCTTGGCAACTGATCAGCAGGGGGTTTCAAGGGTAACAA
AAGGGGAGTGTATTCCGCCAGGCGAGCATTATTGAACACTTTTCTCCAGC
CAGAACGCTGCTACATATGCTTGATGGTGTCGTCGTTTTCGCTTAAAGCC
TTGCAAGCCGTGGGTGAAACGGAGTTGGCCATGTAGACCTAGCCCGGAGA
ACGCACCAAAGAATTCCAACTCTGATGAGCTCAGGTATCATTTCAACATA
GAAAGGTAGGCAACAAGCAGGAGCGGTGTACAGGGCACGGATGCTTAAGT
GCAGCAAGGGGGTGGCCGATGAAGGGACTTATTTCTCCACAAAGTACTTT
GGTCCCTCAGGACGACATCGCTATGGTACCAGGGCCGAGGGGAGTCACTC
TGGACTCTTGGTAAAGAACACTTGTAAGAATTTCTCTGCAACAAACGCAT
TCAATTTTTGGCAAGAGAAGAGTACAGCTGCCTGTCCCTCAAGTGCACTT
TCCAGAAACCATTT

protein sequence of Ec-00_001000.1

>Ec-00_001000.1 ID=Ec-00_001000.1|Name=Ec-00_001000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=706bp
MIYAVVLAAFLCSASAEEDAQALYHNVIPADTADCLDKVTALPLATYEIK
HDSVKGRRHLGPVGPGLEKAIPESVQIHGRSTYPSPNRGEPPITLENQAV
VDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAFDARMHMAVDEMGMRLA
EEADAQLLERKRIVEAEAEEAHLAAELEAIEVEEAHRLTELEALQQREAL
EQQLEIARRKVAAESESKRVETEKALKIQEESTRRREALRLETESQLRKR
RMDLEQEMEAQKRQMDIERVQAEVEAKFAAEQQNEDVMLRKIQAQGEEDR
RRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTL
LLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKA
SLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNG
APYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTEL
HSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGS
ASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKY
CATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEV
QGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMR
AATEH*

mRNA from alignment at chr_00:1299264..1310041+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_001000.1 ID=Ec-00_001000.1|Name=Ec-00_001000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10778bp|location=Sequence derived from alignment at chr_00:1299264..1310041+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GTCGAGCCAGAATAAACGGTTCCTACAGAACGGTATGATTTATGCTGTGG
TTCTGGCAGCGTTCCTTTGTTCTGCCAGCGCCGAAGAAGATGCGCAGGCG
TTGTACCACAACGTGATCCCTGCGGACACGGCAGACTGTCTAGACAAGGT
TTGATCAGCGTTGCGTTTGTGTGCGGCATTTCGAATGCTTGCTGACTGTC
AACTGCTTCAACGTTCTGGGCTCGGTTGTCGGTGTTGTTGGCAATATTTG
TAAGTACAGTATGTATAGACTACAGCATGATGTAGTTTTTCATCCCATCT
ATACCTTTCGGTATCTGGTTGACGCCCCACCCGAGGTCACATGGTATGTA
GTACCACCCAACCATCTGGGAGATCATGGGTGAGAATGCCGGGCGTTTTG
ATTGTTGGAAATTGTGTTTGATCGGTACTTCCTGCAGACCAAGGTCTTGT
CAGTTCACCTGTCCCATTCTGCGGGTCTCCATCGGGGAGAAGCTTTGTCT
ATCTACACATCAACCTCGAACCTGTTGTGTGGGTGAAAATCATGTTTTGG
CTGCTTTAGCGAACACTCAATCTTACGCACTGCGGCTGTGAATATAGGTC
ACAGCCCTGCCGTTAGCAACGTACGAGATCAAACATGACAGTGTCAAGGG
GCGGCGGCACCTGGGACCAGTAGGCCCGGGCCTTGAGAAGGCAATCCCCG
AGAGTGTGCAGATTCACGGGAGAAGCACATACCCATCTCCAAACAGGGTG
AGTGCTGGACACGGTCGTTTGGTTGGAGGTGGTGGTCAATCGTACTGATA
GAGCGCCCGTACACCTTGAGGTAAACACCTCTGTGTTATACTCGACGGAA
CGGCGGCCCCTAATGCATGGTAGTCCTATGTACATTAGGATCAGCTATAT
GTACAAGTGGTTCGCGCTACAACCACGTTACTTTGGACCGAACAGCAGTT
TTTCCGCCTTGTGCAGAGTTCTCGTGTAGTCTACATCAATGACGGCGTCG
TTGAGCATCTCGACGAGCTGTGCTGGTCTATACGTGCTGCAGCTGTGTCT
TCCATCTCTTCGTCTTCTCCAACAATATAAAGCATTCAAATTAAGTACTC
TGTTCGTGAGCGGGACGATCGTGAACGAACGCGGCACTCTTCAACTCAGT
GGTTTATGGTCCAAAACCTCCGCTCGAGATGGATTCTAATATCAGTGCTA
CCCCCCCCCCCCGCCCCCCATGGAGTGAGGTCGTAAATGACGTATGGAAG
GAATTCGAAATTGACGAAGGTGATCCGCTGGAAACGGGAGGTCTACTCTG
CAGATTCAAGAAAAACATATCTGTTCATTTTGCCGGGAGAGAAGAACAGA
ATCAAACCATAAACCAAGGATAAGGAGGGTCTAGATGTGTACGGAATGTA
AAAGACAGGAAATAGGGTTCAAGGAGTACCTACTTGGACCAATGGGTGTA
GCTGAAGGTCAAACTTAGGACCGGGGACATTGGCGTTCGAGAGCGTGGAC
GAACATTTAGGAAGGTAGACGATGACGACGACAAGTTCAAATGTGGTTGG
GGCTCCGAGTGTGAGGACCGTGCTCATGTAGTTGCGGAATGCCCGTTGTA
CAAGAAAGAGAGGGAAGCGTGCATGACTGAGCTGGGAAATGTAAATGTAG
AAGGAAGATACAGGGAGATGTTTGAGGCATGGAATAGCCAGGAGAAGACG
GTAGCTGTACTGGGGCATAGGAAGTGGGTTGAAGAGGCGGGGAGTGATAT
CGATAGGATGGATAGATTAGGGAAGACATATTTGAACCACCTTTGGCAAA
GTAGGAAGGAACGATTGGCCATCGGGGATCGGTCCTGTGGGGAGAATGCT
CCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACCGCTAAGGCATTCAA
AACATAAGAGTACCCCCCTCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGAGTGGGAAAATGTAATT
TTGGAGGGAAGTTCCGGGGGATTTTTTGGGCCTTGAATTACCCGGGGAAA
GCCGGTAGTTTTTTTGGGCCTTGGAAAGGGGTTGAAAGGGGGGGGGGGTA
ATTTGGTTGGGAGGGTTGGTTTGGGGAAAACTTTTTGGACCCCCTTTTGG
AAAATTGGAAGGAAAGGATGGCCCTTGGGGGTTGGTTCTTGGGGGGAAAA
TGTTCCTCCTTTTGGGGGAGGGGGGGCAAAGGTTTTACCCGTAAGGCCTT
TAAAAACAAAAGGGTCCCCCCCCCCCCCCCCCCCCCCCATGAGCAGGGAG
AACCCCCCATCACCCTGGAAAATCAAGCTGTGGTCGACAAAAGCGTTATT
TTCATGAACAACGTTGCTGCTGTCCAAGAGTTAGCCGAACGAAACGAGGC
TATGCGGGCGCAGGTCCGTGAAGTGGGAGGTACCGCTATGTAGGTTTGAG
TCCTTTCGCGAGAATCGTCACACGATAGACACCCGAGGTACGCGACTTGA
GGTTAGGTTTATAGTGCTCGCAGATAGTGTCGTGTTAGTATTTCATGGGT
GGAAAATGCAATGTTCAAAGATAACAGCACCATACGTGCGACTTGTCGAG
CGCTGCCGGCCAACGTCATGCTACGTACACCTACGCTCTGGCAACGCCGG
TGGAGCTATCGGTAGCATCACTTGTTCTCAACACTATGCAGCCTCCGTTG
GCGGCGGTCTAGTGGAAACACGTTATCGGCGCTTACCTTCAATCTATGCT
ACGGGGATAATTTTTCACCGCGGCAATTCGTGGCTAAGAATATACTGTTA
TCTGCGTCATGTTGTTTGTCTTTGGCAGCTGGAGGAGCAGTTGGCGTTTG
ATGCACGCATGCACATGGCGGTCGATGAAATGGGAATGAGACTAGCTGAA
GAAGCAGACGCCCAGCTGCTCGAGCGTAAGAGGTAAGGGGCCTGCCGCAC
GGCGGGCAGATGGGACTTGGCTTTGGTGCATGTTGCAGGCAACCCAGCCG
CTTCACCAATAGCCATTTTGGGAGCTGCGATGCTCAGAGCTCGCTATCTA
GAACACCGTGGGTGAGCGACTCAACATTCGCAAGCATAAATGGGACGGTT
CAAACCTTCTTCGCTGGGCATTGTTTGTCGCATTCGGCCCTTCACATTTA
ATTTTTTGTTTCGAAACTACACGTACTTCGCATGTTACCCTATCTCGCTC
GAAGAATCGTGGAGGCCGAAGCAGAGGAGGCTCACCTGGCGGCAGAGCTA
GAGGCTATCGAGGTGGAGGAGGCCCACAGACTAACGGAGCTGGAGGCTCT
ACAGCAGCGAGAAGCGCTGGAGCAACAACTTGAGATCGCTAGGCGAAAGG
TTGCCGCCGAAAGCGAAAGCAAGAGAGTCGAAACGGAGAAAGCGCTCAAA
ATCCAGGTGTGACCGGGGTCGTAAACTATACCAAATTTTATGGTCGGAGG
CTATAATCCTTGAGTGTGAATATATTCCGAGCCGGCCCAATGCCCATGCC
AGGGTCAGTCAACCCCAGTAGTGCAGAGTCCCTCAAGGTTCTGCCATATC
AGTGGAGGTGAACCATGTTATGCTCGTGGCGTTGCTGGCGTAGGCGGTTT
CTGTGATGCACTTGCACCGCTGACTAACCAGCATAACTGTTGACACCGCA
CACAATTCATAGTTCAATGCTGACCCCCATGACGATTGAGTTGTTGTTGT
TGTCTTCACATTAAAAACCGTTCCGTTCTCTCTGCCCAGTACCTTCTTCT
GTCCGTACTAGTCCAATACTTGACGGGGTCCATTCCTGAGGTCACAGGCA
AACTTACCCAAAAAAAGGTATACGAAAATAAAATGGACCCGAAGGGTCCG
CAAGCCAATAGAAGTCAACGACAGATAGTCTAGGCCATTCCGCTCGTCTC
TACATGCTATGCGGGGTAACCTAGACTGGAAAAAGAAAGAAAAACAAAAA
CAAAGAAGAGAGCAGACGGAGAGAAGGGAAAGGGAAAGAGAAAGACACAG
GCAGAGAAAGACACACGTCGAGCGACAAACAACAAACAAACAAAGAGCAA
AACAGTATTCAATGGTGAATCTCATGCCGTTACGCAGGAAGAGTCTACGC
GAAGGAGGGAAGCTCTACGTTTGGAAACGGAGAGCCAGCTTAGGAAACGA
AGAATGGACCTGGAACAAGAAATGGAGGCCCAAAAACGTCAGGTACTATT
GAAGAAAATTGTGAAATGTCTCAAATTGAATCGAAAGTACGGCATACTGT
ACCCTTGAGTGTGGTGGGCCAACATCAGTGACGAACCGATAATGCGGAGT
CGACGATGCGGGTTGAGTGCCTGGGATAACTCGGCCGCATTGTTCACCAA
TCGGGTCAACACCTACCTCCCATTACCCAACATTGAGGACAAGGGGTGGT
CGGGAAACACGGAGATCCCGAATGTAGACTAGACTCACGTTGAACCAAAT
AAGAGGGACACAATACACAGGTTGAGACGAGTGAAGACAACATACAAGAC
AAGGATAAGGGCAGAAAATGAGTTACTCAATAGATGAGCGCCGATAATGG
CTTTCGTTTTCGCTTGTCGCTTGACTGACGGCGTGAAATATCCTAAGCCA
TTTCGAAGCGCGTTTCAACCATTCCGTGAACTTGGGACGACAGATGGATA
TAGAGCGGGTACAGGCTGAGGTGGAAGCTAAGTTTGCAGCGGAACAACAG
AACGAAGATGTGATGCTACGGAAGATACAAGCTCAGGTGATAAACACCAA
AACGTATGCCTTTATTTTGGGTCTGGCAAAAGACACGTGGTGCCGCTGCC
TGTTCCTCTTGAATCGTCGCCTTGCGTGCACCCTTCTCGGAAGAAACCCT
GTCGATTCCAATGGATTCGGTAACATGCGAACTGAAGTGACATCAAGCCT
TCCGTCGGAATCTCTGGTGAGGCACCAAAGATAGTCTTGCGGTCTGGAAT
TCTTCCGGAATTATTTTCGGTCCATGATGACGTCACCGTTGATTTCAAGG
ACGCATGTTGCAACACATGGAACCGCCGATGCCTGGATTTTGGCTTAATA
TTGCTAACTATGTGGCAGTGCTTTACGATACTGCTGCCGTCTTCATTTGT
TTGCTTTCGGCATTATTCCGGTGGTTCCAGTTTAGGCAATCTCGACCGTC
ACCCTTCCACCATCAAGACCATAGTCCTGGTCCTGGTGTGGGTAGGCAGT
TCGAAACACAACCGTGGTACGCTAAGAGAAAACGTACACATTGCATACCT
ACGACGAACAAAAACACCGTAATATGGCCCGGTGCCTAACGATAGTAACG
CATGTTGAACCGCGCACACGCAGGGTGAAGAGGACCGCAGGCGGACCCAA
GAGGCCATCAACACAGTCCTCGCGCACCTCGCATCTGCCGTCTACGGGCT
CGTGTCCGACCCTAGGTGGGCGAAGAAGCCATGGACGCTAGAAGCAAGCA
TGCGGCGGACGGGGTGCTGCTTTGCCTCAACCACAATCATTGAGAGTCAC
CGTTCTCAGACAGAGACCGTACGGAGGAAGAATATACTTCGTAGTTTTTG
TGTGACGTCTTGGGGTACACTTGGTGCCGACCATACATTTTCCACATCTC
GCCTACATCTTATTTGACAATTTGGATTTCTATCTCCTGCCAGACGAGCG
TTAACGCTGACCTCGTGGCTACTCGGTCTATTGGCCGGGTATATGGTGCT
GAAGGAGGGTACTCTTCTCCTCAGACAGGTGCGTTGGCGTGACCGGCAAG
TGCTGTCAACCGCAATGTCGCATGAGCGAAGGATCGATGACAGCCAATTT
TTACATGCTCCCCTGCCGGTATCCCCTTGAGCTGACAGCCCCTTCGGGGG
TTTGGCCATGTGAAATATCGAGAGTCAACAATGTTCACGAGTTGTCGAGA
TTCCTAACACTGAAGATAAGAGTGAACAAACCCAAGTAGCTTCAGCTATT
CTTCCGCGAGCGCGCAGTGTTTTGAGATGTTTCTAGGTCTTAGACCATTC
GAAATGTCACCGTGACTTCGGGGGTAGGAGGGAGGGTTGATATAGTTTTG
ACAACACTGCATGCGGTGCCGAGGGTAACAAGATATGCACCCCAATAACC
TCTATTGCAACGTCTACAGCTCCTCGAAACCTACCTCGGGAAGCCCAGCT
TGGTGCGAGAAACTTCTCGTGTGGGGACGCTGAGGTCGACCAACCACCGT
CTTCTCCATGCAGCGAAATGTTTGGTTAGATTCATCTGTGAGAAGGCCGG
CAAGGCTTCTCTTGAGGGAGAAGGCTGGTCACCAAAGAGAACGCGATCCG
GGAGGGAGGAGGCTGTGAACGCTTTCCGAGACGTCGTACTTGCCCCGGAT
CTCAAGGAACAGGTGATCTGCTGGATGTGTCGTCGAAAGTGCGAAATCCT
GTTTGTCCTGGAACATCCCTGCGAGACTCGATATGTGATACTGGTGACAA
TGCTAGCATCTCGACGTATGATTCGGATGAAACATTAGGCTGGTGTGTCA
TTGAAGTGGCGTAGTCTACAAAATTAAATTCCTGTTTGGGCGAACCGTCT
TTCTCGACCTTCGAGCGGTTGCACAACAGACCAAACGATTGCAGGCAGAC
TGTTCGCGCGAAAGATGATCTGACATGTTGCGAGCCTGCTGTGTGCGTAA
CCGACTCATTCCAACCTGCATGGTCGGGGACCTCTGGTACCTGATGATGA
GTACCAGTTAAAACTCGCTGATAAACAAAATCTCATGAAACAGGTGCTTT
CTCTGGCGGTGGCGACGAGAAATTCCAAGAGGAACGGCGCTCCCTACCGA
CACCTCCTGTTGTACGGTCCTCCCGGCACTGGAAAAACCATGGTTGCCAA
GCGCCTGGTGAGCGAGCTCAGCAATCTGTCACGGTCCCTCGAGAACGGGC
TGGATGCCGACCCTTGTTGTTGGAATCCCTCCAAGAGAGTGCTCCCTAGA
CTCTTTGGTCATTTTTCCGAGTTTCCCCGTCAGGGGTGCCAAGAACGGTG
TATACATCAAAATTATGTTCTATCACCGAAGACTTTCACTGTGTGCGACA
AGAAACAACACGGCCGGGTTCGAAGTACGGTGGAAAAACCAATGATGGAG
TCTTCGAAACGTGTCACGAGTCTGTTACGTCAACCAGGAAACCCCCTTTA
AAACGGACACATGTGCCAGGCTCTCGAAACATTCCTTTACGGGCACCATG
CGAAAAACGTTCTTGTTTCCAGGCCGCATGCTCTGGTATGGATTGCGCGG
TGATGAGCGGTGGAGACGTTGCCCCTTTGGGCAAAAATGCTGTCACGGAG
CTTCATAGTCTCTTCCGTTGGGCTGCCAAGTCGCCCAGGTTTGTTGCACG
CAATATTGGCGGCGCCGCGTCAATCAACGTTCGGTCCGATCGCACACCCT
CGTTGTCTGACACAGTTCACGGGAGAGCGACTCAAAAATCTTAAACTAGG
TCGAAAGACCACCAACAGATTTGAAACCTTCCCCTATTCCATGGGTGGCT
TCTTGTTTGCCTGAACGTTTTACGACCTTTCCTTCTGTATTCCTTTGTTT
GGGGTGCTCGGCAGAGTACACTGTCTACGGGGCCTCCGGGGGGTACGCGG
ATGAAATGTGTTGATGGGCATGCTGCATGGCGATGGTGTTGCCTACCGCA
TGTCTCTCACTCTCTGAGCAACAAGGTCTTGTGTCAACCTTCTTTCTCTT
TCGGCCTCTGACGAGCTACCGCACCCAAACATTCCTCAAGTCCCAAGCGG
TGTGTTTCATCCCTGTATGCAGCAGGGCAGAGTGGGCCCATTCAAACTTT
GACTGCGGCAAGTATTCTAGCTCCGTTCTCAACCATTCGACGTGTGCCCC
TACAGAAAATGCCAGTTCGAAAGGAACACGCAACGATGTGGTTCGAGGTT
CAGATGTAGGAGCAAATCCTAGAATGAGTATACGACTCTCTTTACAACCT
GTTGCACATCCACAGCCGCTGACTTGGCGAGGAGTGGTTCGTCCGAATAG
ATATATATATTGTTCAAGGTATTATTTAAACCTAACAGTAGCTTAACAGG
GATAGGGTTAGAATCGATCAGAGGTATGCTATCGATGAGCTACGTCACTC
CTGGTATTGTCACGATTTGTTGAGAGCATCAGGGAAGGATGTACGCATTG
TTGTTGCCCATGCCAACGCTGTGGCGCACAATGCTGCAAACGTCAAATTT
CGTTATTTCAAGGGGACTCCTACTGTTCATCGACGAGGCTGAAGCTTTTT
TGGGCAAGAGATCCAGACCTGACATGTCCGAGGGCACGAGGAACGCCCTT
AACGCCCTGTTGTACAACACGGGTTCGGCTAGTCGCCGGCTAATGATGGT
CTTAGCTACCAACAGGGCAGAGGTGGGTAAATACCAGCTGGTAAATACAG
CCTGTAGAAGGTGCAGGGAAAATGTGATGGTGTCACCGGAAACAAGACAA
TACCTTCCGTTACCCGAAACTGTACATCTCATGGTCGCGTCGTGGTGCAG
CACTGCGCAGTGATGGAGAACGCTGTATTTGACGTTCGTTTATTTCCGAG
TTTGCTATGCCTTGCTAGTTGTCATCTATCCCCAAACTTCGTACACGAGC
CGGCAATTCCGAAGCCCAAGCGATCGGGCGTGACAGGGTTTGTGAACGGC
CTTGAGCAATTGGCATGCGAAACCAGTACCGCCGCGTGCTGGCGTACATG
AAAAAGCTGTCTAGTACACCGCGCCCATCTAATGCAAGAATCGCATGAGT
GAATGTGGTCGGCTGTTGTGTGCTCCGATGATGCACTATTGTGAATTAAG
GATCTGGACGAGGCTGTTCTGGACCGCATGGACGACTCCCTCCTGTTTCC
TATCCCTGACAGGAAGTCTCGAGCACAGCTCCTGGTCCAGGTGCGATGTT
GCTTGGTATGTCCTCTCCTCAGATGCTATGTCACACTGTAGGTACTTAAT
AGGTGGGCACCTACTTTTCATCAGGTTGGACTACAGTACTGTACGTACGC
AAACGCATATGTAAAACACAACGTGTGTTCGTGTTTGATTGACTGAGTGG
AAAATCAATACTTTGAGCAAAAACGGCGACAGGTCGATAGTAATGCATGA
CCGGACGGTCCTACTTCTGGTCCGCGTGTTAACGCGTCTGCTTGTTTTCC
TATCGCAGTATTTCCACAAGTACTGCGCGACTGGTAAGGATGGCAGATCT
ATTGGCGCGGGTTGGGGTCTTTCCAGCAAGATCTCTGGGTGGTGGCGCGG
GAGCTCGGCCGAAGGACTGACGATCGATGTAGGGGTGGACGAACGCCTTG
TTAAGGGACTCGCAGAGGAGGTGCAGGGCTTCAGCGGCAGAGAGGTCGGT
GTCCTTGGTTGCCATTAATCCCCGGTGGTTTGTGGCTTAGAGCCAATGGT
TGCCTTATTATTAGCTTTCGTCTTCGGTGTGGTTTCTTGGGGGTTCCAAG
CACAGTATCGATGATGCCCGATGGTGGACGATTATGTTGGGGTGGAGTTC
GTTCTGCGTGTTCATGGTTGGTACACTGAAAGAACGCGCAACGTACCCGT
TCACCGTGAATCCACTGCCTGGTGGCCATTGAAGAGGAGCACTCTCCATT
CATATTATGCCGACAGAAATGCCGTCTGAGACCCCACGACGGCGTAAAGA
CCGACCATTCCATGACTGGACACGGCGTTCTTTCCAAAGCCCGCACTTTG
CTGCCGGTATCAGGATTCACACAAAACGGCGAGAAGTACAGGTGCTACGA
AACAGTTGAGACGACGGTGAAGGGCCCCTTTCCCTTCGTTCTTGTAGCCA
TTAGGTGAACGGCCCAGCCGTGGCGCAGACCTCGAAGGGGTGGGGCATGC
CCTGAGCCTTGAGAGCTTGCCGACAATGAAACCTCTGGAGGTCTCAAATA
TAAAATCATCCCTCTTTCCCAACAACGTCGTTGCTATCGCGCTACTGCTG
TATACCTTCCCTGTGACAGGTGGAGAAGCTTATGCTGGGGGTGCAGAGCT
GTGCATACGGATCCGAGGACGGGGTGGTGACGGCCGACATGATCAAGAGG
GTCGCGACTCAGAAGGCAAAGGAGCACGGTGCCAAAGTCAAGATGAGGGC
GGCAACCGAACATTAGGAAACCAGCCTTGAGAAATCTGCGGACGAGTTGG
CAATAGCTGGCCTTCTGGGGTTTCAGCACGGCTCACGGCGAGTCGCTTGT
CGTCAAATAGAACAGACAATGTTTTCCTTGGCAACTGATCAGCAGGGGGT
TTCAAGGGTAACAAAAGGGGAGTGTATTCCGCCAGGCGAGCATTATTGAA
CACTTTTCTCCAGCCAGAACGCTGCTACATATGCTTGATGGTGTCGTCGT
TTTCGCTTAAAGCCTTGCAAGCCGTGGGTGAAACGGAGTTGGCCATGTAG
ACCTAGCCCGGAGAACGCACCAAAGAATTCCAACTCTGATGAGCTCAGGT
ATCATTTCAACATAGAAAGGTAGGCAACAAGCAGGAGCGGTGTACAGGGC
ACGGATGCTTAAGTGCAGCAAGGGGGTGGCCGATGAAGGGACTTATTTCT
CCACAAAGTACTTTGGTCCCTCAGGACGACATCGCTATGGTACCAGGGCC
GAGGGGAGTCACTCTGGACTCTTGGTAAAGAACACTTGTAAGAATTTCTC
TGCAACAAACGCATTCAATTTTTGGCAAGAGAAGAGTACAGCTGCCTGTC
CCTCAAGTGCACTTTCCAGAAACCATTT

Coding sequence (CDS) from alignment at chr_00:1299264..1310041+

>Ec-00_001000.1 ID=Ec-00_001000.1|Name=Ec-00_001000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2118bp|location=Sequence derived from alignment at chr_00:1299264..1310041+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATTTATGCTGTGGTTCTGGCAGCGTTCCTTTGTTCTGCCAGCGCCGA
AGAAGATGCGCAGGCGTTGTACCACAACGTGATCCCTGCGGACACGGCAG
ACTGTCTAGACAAGGTCACAGCCCTGCCGTTAGCAACGTACGAGATCAAA
CATGACAGTGTCAAGGGGCGGCGGCACCTGGGACCAGTAGGCCCGGGCCT
TGAGAAGGCAATCCCCGAGAGTGTGCAGATTCACGGGAGAAGCACATACC
CATCTCCAAACAGGGGAGAACCCCCCATCACCCTGGAAAATCAAGCTGTG
GTCGACAAAAGCGTTATTTTCATGAACAACGTTGCTGCTGTCCAAGAGTT
AGCCGAACGAAACGAGGCTATGCGGGCGCAGCTGGAGGAGCAGTTGGCGT
TTGATGCACGCATGCACATGGCGGTCGATGAAATGGGAATGAGACTAGCT
GAAGAAGCAGACGCCCAGCTGCTCGAGCGTAAGAGAATCGTGGAGGCCGA
AGCAGAGGAGGCTCACCTGGCGGCAGAGCTAGAGGCTATCGAGGTGGAGG
AGGCCCACAGACTAACGGAGCTGGAGGCTCTACAGCAGCGAGAAGCGCTG
GAGCAACAACTTGAGATCGCTAGGCGAAAGGTTGCCGCCGAAAGCGAAAG
CAAGAGAGTCGAAACGGAGAAAGCGCTCAAAATCCAGGAAGAGTCTACGC
GAAGGAGGGAAGCTCTACGTTTGGAAACGGAGAGCCAGCTTAGGAAACGA
AGAATGGACCTGGAACAAGAAATGGAGGCCCAAAAACGTCAGATGGATAT
AGAGCGGGTACAGGCTGAGGTGGAAGCTAAGTTTGCAGCGGAACAACAGA
ACGAAGATGTGATGCTACGGAAGATACAAGCTCAGGGTGAAGAGGACCGC
AGGCGGACCCAAGAGGCCATCAACACAGTCCTCGCGCACCTCGCATCTGC
CGTCTACGGGCTCGTGTCCGACCCTAGACGAGCGTTAACGCTGACCTCGT
GGCTACTCGGTCTATTGGCCGGGTATATGGTGCTGAAGGAGGGTACTCTT
CTCCTCAGACAGCTCCTCGAAACCTACCTCGGGAAGCCCAGCTTGGTGCG
AGAAACTTCTCGTGTGGGGACGCTGAGGTCGACCAACCACCGTCTTCTCC
ATGCAGCGAAATGTTTGGTTAGATTCATCTGTGAGAAGGCCGGCAAGGCT
TCTCTTGAGGGAGAAGGCTGGTCACCAAAGAGAACGCGATCCGGGAGGGA
GGAGGCTGTGAACGCTTTCCGAGACGTCGTACTTGCCCCGGATCTCAAGG
AACAGGTGCTTTCTCTGGCGGTGGCGACGAGAAATTCCAAGAGGAACGGC
GCTCCCTACCGACACCTCCTGTTGTACGGTCCTCCCGGCACTGGAAAAAC
CATGGTTGCCAAGCGCCTGGCCGCATGCTCTGGTATGGATTGCGCGGTGA
TGAGCGGTGGAGACGTTGCCCCTTTGGGCAAAAATGCTGTCACGGAGCTT
CATAGTCTCTTCCGTTGGGCTGCCAAGTCGCCCAGGGGACTCCTACTGTT
CATCGACGAGGCTGAAGCTTTTTTGGGCAAGAGATCCAGACCTGACATGT
CCGAGGGCACGAGGAACGCCCTTAACGCCCTGTTGTACAACACGGGTTCG
GCTAGTCGCCGGCTAATGATGGTCTTAGCTACCAACAGGGCAGAGGATCT
GGACGAGGCTGTTCTGGACCGCATGGACGACTCCCTCCTGTTTCCTATCC
CTGACAGGAAGTCTCGAGCACAGCTCCTGGTCCAGTATTTCCACAAGTAC
TGCGCGACTGGTAAGGATGGCAGATCTATTGGCGCGGGTTGGGGTCTTTC
CAGCAAGATCTCTGGGTGGTGGCGCGGGAGCTCGGCCGAAGGACTGACGA
TCGATGTAGGGGTGGACGAACGCCTTGTTAAGGGACTCGCAGAGGAGGTG
CAGGGCTTCAGCGGCAGAGAGGTGGAGAAGCTTATGCTGGGGGTGCAGAG
CTGTGCATACGGATCCGAGGACGGGGTGGTGACGGCCGACATGATCAAGA
GGGTCGCGACTCAGAAGGCAAAGGAGCACGGTGCCAAAGTCAAGATGAGG
GCGGCAACCGAACATTAG

Synonyms

The feature 'Ec-00_001000.1' has the following synonyms


Synonym
Esi0013_0017
Esi_0013_0017