Ec-00_000790.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_000790.1 vs. uniprot
Match: D7FIJ5_ECTSI (Surface protein Sur1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ5_ECTSI) HSP 1 Score: 423 bits (1087), Expect = 1.340e-148 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 3 Query: 252 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGGKSTNQNLALPPDQKLGRGGKNPSPKKAKN 854 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGGKSTNQNLALPPDQKLGRGGKNPSPKKAKN Sbjct: 1 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGGKSTNQNLALPPDQKLGRGGKNPSPKKAKN 201
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A6H5JQP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP8_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 5.100e-136 Identity = 197/226 (87.17%), Postives = 203/226 (89.82%), Query Frame = 3 Query: 87 MSLSVDVDVDEGAHDVGPAAPLRPAFSDCFSPSPTSTSPSAGGAAAASIPSARAKMRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 764 MSLSVDVDVDEGAHDVGPAAPLRP FSDCFSPSPTS AASI SARAK+RWGLWSP DAEWMQLVQDNYNKHHRLAGP+REDGE LIPLKIHHIWLGSPLP AFARL ESWLARHSG SSQG G E S STPWEVRLWTDAD++AFGLENRGAYDAAQNFGQKSDILRYE+LLRHGGLYVDVDFLCL SFDDLH+RYEFYAGVSNTGTFELNNGLIG Sbjct: 1 MSLSVDVDVDEGAHDVGPAAPLRPVFSDCFSPSPTSXXXXXXXXXAASILSARAKIRWGLWSPNDAEWMQLVQDNYNKHHRLAGPIREDGEPLIPLKIHHIWLGSPLPAAFARLCESWLARHSGPSSQGLGHEMSKSSSTPWEVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLSSFDDLHRRYEFYAGVSNTGTFELNNGLIG 226
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A836C8H1_9STRA (Surface protein Sur1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H1_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.290e-45 Identity = 81/182 (44.51%), Postives = 104/182 (57.14%), Query Frame = 3 Query: 231 IPSARAKMRWGLWSPIDAEWMQLVQDNYNK--HHRLAGPVRE--DGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 764 +PS R ++W LWS D W+ L +Y R +G + IP +H +WLG +P F LRESW H G WE+RLW DV+ FGLENR A+DAA N+G+KSDI RYE+L RHGG+YVDVDFLCL S + +F+AG++N G E+NNGLIG Sbjct: 14 LPSDR-PLKWALWSTEDRRWLHLASLHYEHTWRQRCSGDATAAIGQQPCIPHTLHQVWLGGSMPSKFRDLRESWAKLHDG-----------------WELRLWGGGDVEDFGLENRAAFDAATNYGEKSDIFRYEILHRHGGIYVDVDFLCLQSLQVMADNLDFFAGLANVGAVEINNGLIG 177
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A6G0WYT2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYT2_9STRA) HSP 1 Score: 139 bits (351), Expect = 6.490e-36 Identity = 74/173 (42.77%), Postives = 98/173 (56.65%), Query Frame = 3 Query: 252 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKR--YEFYAGVSNTGTFELNNGLIG 764 MR+ LW D W + + +++ L G +IP +IH IWLG L + F +SW H P+ WE LWT+ +++ + L+N+ AYD A NFG+KSDILRYE+L GGLYVDVDF CL FD LH+ EFYAG+SNT + E+NN LIG Sbjct: 1 MRYKLWGAEDMAWHFHLSERFDEQRDLWEAPPSPGPPVIPKRIHQIWLGPALMDEFHSYIQSWKNHH---------PD--------WEYTLWTEREIENWKLQNQAAYDMATNFGEKSDILRYEILETFGGLYVDVDFECLKPFDQLHENPTCEFYAGLSNTRSVEINNALIG 156
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A7S4N7T0_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N7T0_GUITH) HSP 1 Score: 133 bits (335), Expect = 1.780e-33 Identity = 77/205 (37.56%), Postives = 104/205 (50.73%), Query Frame = 3 Query: 249 KMRWGLWSPIDAE--WMQ---LVQDNYNKHHRLAGPV---------REDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIGGKSTN---QNLALPPDQKL 812 KM+WG W D + W L ++N K + PV +E IP IH IWLG +PE F R +W+ H PE W+ LWT+ DV+ + N AY A N G KSD+LR EV+ R GGLY+D+DF CL SFD LH +FYAG+SN G E++NG+ + + + L + D+KL Sbjct: 5 KMQWGWWFEDDEDFCWKTMRGLYEENVRKRMSMQSPVGGESPGSPSKETASPRIPRIIHQIWLGGNIPEQFLAWRNTWIDLH---------PE--------WQHILWTEEDVEELAMLNPEAYKNAPNLGAKSDLLRLEVVWRFGGLYIDIDFECLKSFDVLHDHLDFYAGLSNVGAMEISNGIFAARKKHPILKKLLMDQDKKL 192
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A0G4I5X9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I5X9_9ALVE) HSP 1 Score: 134 bits (337), Expect = 1.060e-32 Identity = 69/175 (39.43%), Postives = 99/175 (56.57%), Query Frame = 3 Query: 249 KMRWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLG-SPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKR--YEFYAGVSNTGTFELNNGLIG 764 K +W LWSP D +W + + +++ +H G ++IP ++H IWLG +P E+W RH PE WE +LW ADV++ L NR AY+ A+NF KSDILR E+L + GG+YVDVD+ C+GS +L + + F+ G +N G ELNNGL+G Sbjct: 56 KWKWNLWSPNDRQWGRKIVEHWRRHKEQEGQEMSH-HSVIPKRLHQIWLGPKEIPSQCKEFMETWKRRH---------PE--------WEYKLWRHADVESLKLRNRSAYEEAENFAHKSDILRLELLSQFGGVYVDVDYECVGSLRELCESGCFGFFCGAANVGGVELNNGLMG 212
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A7S4W6Q7_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W6Q7_9DINO) HSP 1 Score: 133 bits (334), Expect = 1.200e-32 Identity = 74/172 (43.02%), Postives = 92/172 (53.49%), Query Frame = 3 Query: 255 RWGLWSPIDAEWMQLVQDNYNKHHRLAGPVREDGEALIPLKIHHIWLGS-PLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVD-AFGLEN-RGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLI 761 RWG+WSP D W Q + R DG IP +IH IWLG P+P + ESW A H WE LWTD D + A N R A+ A+N + SD++R ++L+HGGLYVDVDF CL FD+LH R+ F+AG+SN G FELNNGL Sbjct: 102 RWGVWSPSDRRWSDEAQRLWQLASRAGA---HDGPR-IPRRIHQIWLGPRPIPRDCVEMMESWKAAHPS-----------------WEYTLWTDLDAESALATPNLREAFAGARNPAEMSDVVRLGLILQHGGLYVDVDFECLQPFDELHGRFSFFAGLSNVGVFELNNGLF 252
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A7S1CD16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD16_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.200e-32 Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 366 IPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 764 IP +HH+WLG LP FARLR +W H P R W+ LW DA+V A L NR A+DAA N+G+KSDILRYE+L GG+YVDVD + LH+ + Y G SNTGTFELNN ++G Sbjct: 30 IPRIVHHVWLGGRLPRRFARLRATWTTTHP--------PSRG------WQHVLWGDAEVAALTLRNRAAFDAAGNYGEKSDILRYELLWAFGGVYVDVDMQAVRPLTPLHRVCDLYVGFSNTGTFELNNAVVG 148
BLAST of Ec-00_000790.1 vs. uniprot
Match: F0W3M3_9STRA (Surface protein Sur1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3M3_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.210e-32 Identity = 71/173 (41.04%), Postives = 94/173 (54.34%), Query Frame = 3 Query: 255 RWGLWSPIDAEWMQLVQDNYNKH---HRLAGPVREDGEALIPLKIHHIWLGS-PLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLI 761 +W WSP D +W Q + + +++ V D IP IH IWLG P+P + E+W H P+ WE +LWTD V L+N+ +D A N+G+KSDILRYE+LL+ GG+YVDVDF CL F DL + + F G+SNT ELNNGLI Sbjct: 41 KWNFWSPDDRDWNQALLSQSTERLCDNQMFPTV--DNAVRIPFIIHQIWLGPHPIPAFCLQQMETWRQIH---------PQ--------WEYKLWTDTQVSTLKLQNKEHFDLAGNYGEKSDILRYEILLQFGGIYVDVDFKCLRLFQDLLQAFSFITGISNTDVVELNNGLI 194
BLAST of Ec-00_000790.1 vs. uniprot
Match: A0A812NYH8_SYMPI (RH31 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812NYH8_SYMPI) HSP 1 Score: 134 bits (338), Expect = 7.350e-32 Identity = 78/175 (44.57%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 252 MRWGLWSPIDAEWMQLVQDNYNKH-HRLAGPVREDGEALIPLKIHHIWLGS-PLPEAFARLRESWLARHSGLSSQGRGPERSNGGSTPWEVRLWTDADVDAFGLENRG---AYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLI 761 +RWGLWSP D +W++ +++ + +L D IP IH IWLG PE SW +RH G WE RLWTDADV A L + G AY+AA N +KSDILR ++LRHGGLYVDVDF CL LH R FY G+SN G E+NNGL Sbjct: 524 IRWGLWSPNDRQWLEELKELWQDAVAQLGSAPGLDPRPAIPQCIHQIWLGGRSRPEPCEGFTASWRSRHPG-----------------WEYRLWTDADV-AEELTHPGLAQAYEAASNPAEKSDILRLAIILRHGGLYVDVDFECLQPLGALHSRASFYCGLSNVGAVEVNNGLF 680 The following BLAST results are available for this feature:
BLAST of Ec-00_000790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_000790.1 ID=Ec-00_000790.1|Name=Ec-00_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=257bpback to top spliced messenger RNA >Ec-00_000790.1 ID=Ec-00_000790.1|Name=Ec-00_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=858bp|location=Sequence derived from alignment at chr_00:1045250..1047193+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. CTGGTGCTGGTGCTGGTGCCACTTAACCTTCCTCCTCAGCTTCATCGTGGback to top protein sequence of Ec-00_000790.1 >Ec-00_000790.1 ID=Ec-00_000790.1|Name=Ec-00_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=257bp MSLSVDVDVDEGAHDVGPAAPLRPAFSDCFSPSPTSTSPSAGGAAAASIPback to top mRNA from alignment at chr_00:1045250..1047193+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_000790.1 ID=Ec-00_000790.1|Name=Ec-00_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1944bp|location=Sequence derived from alignment at chr_00:1045250..1047193+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:1045250..1047193+ >Ec-00_000790.1 ID=Ec-00_000790.1|Name=Ec-00_000790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=771bp|location=Sequence derived from alignment at chr_00:1045250..1047193+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_000790.1' has the following synonyms
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