Ec-00_000720.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_000720.1
Unique NameEc-00_000720.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length196
Homology
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BLAST of Ec-00_000720.1 vs. uniprot
Match: D7FI20_ECTSI (Ferredoxin-dependent glutamate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI20_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 1.380e-137
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAKLASTKK 585
            MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAKLASTKK
Sbjct:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAKLASTKK 195
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A6H5JVG8_9PHAE (Glu_synthase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG8_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 1.000e-127
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAKLASTK 582
            + GSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLR+DVKVICSGKVTSGFG+VRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERV RFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEG AAEPLQE+WRQGQAKLASTK
Sbjct:  365 VDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLREDVKVICSGKVTSGFGIVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVLRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGTAAEPLQEVWRQGQAKLASTK 558
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A0L0FI59_9EUKA (Glu_synthase domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FI59_9EUKA)

HSP 1 Score: 236 bits (601), Expect = 1.330e-75
Identity = 116/187 (62.03%), Postives = 143/187 (76.47%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAA-EPLQEIWRQG 558
            + G+EGGTGAAPPEFSNSVG PL+EGL  V+D+L GAG+RD VK+I +GKV SGF VVRNL+LGAD+CNSAR MMFALGCIQALKC +N CP+G+ATQ+P LM+GL    K+ RV  +Q+ TV  A  II AAG  +PA +SR  + +R DGV  ASY EL+P  +PGSLL+G A  + LQ+IW  G
Sbjct:   31 VDGTEGGTGAAPPEFSNSVGMPLIEGLTFVNDILTGAGIRDQVKIITAGKVISGFSVVRNLALGADICNSARAMMFALGCIQALKCDSNKCPSGVATQNPALMAGLDPNDKSVRVFNYQKNTVDAALHIIGAAGYDSPAGVSRDHVMVRTDGVYCASYAELYPAVKPGSLLDGTAERQNLQQIWDAG 217
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A8J1ZSA7_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZSA7_9DINO)

HSP 1 Score: 218 bits (555), Expect = 7.760e-64
Identity = 102/183 (55.74%), Postives = 132/183 (72.13%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIW 549
            + G EGGTGAAP EFS+ VG PL +GL+ +DDLL GAG+RDDVK+I SGK+  GF ++R LSLGAD+CNSARG M +LGCIQALKC TNHCPTGI T DP L++GL +P+K ERVR + + T+ + TE++ A G S+P +L R  I  R   +   +Y E++P  + G LLEGA  + LQ  W
Sbjct:  473 IDGGEGGTGAAPVEFSDRVGAPLRDGLIFMDDLLTGAGIRDDVKIIASGKIMDGFSMIRALSLGADVCNSARGFMMSLGCIQALKCNTNHCPTGITTSDPTLIAGLDIPTKAERVRAYHENTLLSFTELLGATGCSDPDQLRRVHIMRRGVSMKVETYAEIYPELESGCLLEGAGPKQLQYFW 655
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A7S2AMM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMM4_9STRA)

HSP 1 Score: 207 bits (527), Expect = 5.330e-63
Identity = 112/199 (56.28%), Postives = 133/199 (66.83%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLR---------DDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNS---ASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQ 561
            + G EGGTGAAPPEFSN +G PL EGL LV + L GAGL          DD+K+I SGKV SGF +V+ L+ GAD+CNSAR MM ALGCIQALKC TN CPTGIATQDP LM+GL VP+K  RV+ FQ++TVH A EI  A GV+NPA L  + I  +R G  +    SY EL+P    G LL G A   LQ  W + +
Sbjct:  133 VDGGEGGTGAAPPEFSNHIGMPLAEGLTLVRNTLVGAGLTRMQSEHPGDDDIKLIASGKVLSGFSLVKTLASGADVCNSARAMMMALGCIQALKCNTNKCPTGIATQDPDLMAGLVVPTKAIRVQNFQEQTVHAALEITGAIGVTNPASLQPNHI-YKRVGTGTHGVISYDELYPSVPFGCLLTGEAPPALQASWNRAE 330
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A0G4J4Y0_PLABS (Glu_synthase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J4Y0_PLABS)

HSP 1 Score: 212 bits (540), Expect = 1.630e-62
Identity = 109/188 (57.98%), Postives = 131/188 (69.68%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQA 564
            + G EGGTGAAPPEFS+ VGTPLVEGL  VD++L GA LR  +K+I SGKV +GF +V+NL+LGADLCNSAR  MFALGCIQ+LKC TN CPTGIATQDP LM GL  P K  R   F  KTV  A ++I + G ++P  L    IK R     +ASY EL+P    GSLL+G A   LQ+IW + +A
Sbjct:  391 VDGGEGGTGAAPPEFSDRVGTPLVEGLRFVDNVLIGADLRHRIKIIASGKVLTGFSIVKNLALGADLCNSARAFMFALGCIQSLKCNTNTCPTGIATQDPNLMYGLVAPDKAVRCYNFHTKTVEIAVDMIGSVGCTSPDLLRPGHIKKRISETQTASYEELYPTIPAGSLLKGTAPIFLQKIWDRTRA 578
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A830HEV5_9CHLO (Glu_synthase domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HEV5_9CHLO)

HSP 1 Score: 210 bits (535), Expect = 2.310e-61
Identity = 106/185 (57.30%), Postives = 130/185 (70.27%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEP--LQEIW 549
            + G EGGTGAAPPEFSN VG PL+EGLV+VD +L GAGLRD V+VICSGK+ +GF +VR L+LGAD+CN+AR MMFALGCIQALKC TN CPTGI TQD  LM+GL VP+K+ RV RF +KT   A  I+ A G  NP +++   +  R     SAS  E++P    GSL+   A  P  +  IW
Sbjct:  417 IDGGEGGTGAAPPEFSNRVGAPLIEGLVIVDRVLVGAGLRDKVRVICSGKIVTGFDIVRALALGADVCNAARAMMFALGCIQALKCDTNKCPTGITTQDASLMAGLDVPTKSVRVARFHKKTTDKAFGIMGAMGYDNPIQVTGRNVVERLSPTRSASLEEIYPTIPAGSLVSTHAEAPVHMMAIW 601
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A3M1KJF6_9BACT (FMN-binding glutamate synthase family protein n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A3M1KJF6_9BACT)

HSP 1 Score: 208 bits (529), Expect = 4.160e-61
Identity = 97/183 (53.01%), Postives = 137/183 (74.86%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIW 549
            + G+EGGTGAAP EF+NSVG PLVEGL  V + L GAGLRD +++I +GK+T+GF V++ L+LGAD CN+AR MMFALGCIQALKC +NHCP G+ATQ+PKL++GL + ++TERV  FQ++TVH+  E+++AAG+  P +L+   +  R       S+  L+PP +P SL++G A++  +  W
Sbjct:  365 VDGTEGGTGAAPLEFANSVGMPLVEGLAFVHNALTGAGLRDQIRLIAAGKLTTGFHVLKLLALGADFCNAARPMMFALGCIQALKCNSNHCPVGVATQNPKLVAGLDIENRTERVYNFQRETVHSVFELLAAAGLDAPDQLTPHHVYRRIATAKIVSFASLYPPIEPRSLVDGKASDHWRTWW 547
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BLAST of Ec-00_000720.1 vs. uniprot
Match: UPI001BDF179F (FMN-binding glutamate synthase family protein n=1 Tax=Glaciecola sp. XM2 TaxID=1914931 RepID=UPI001BDF179F)

HSP 1 Score: 207 bits (527), Expect = 6.450e-61
Identity = 99/171 (57.89%), Postives = 129/171 (75.44%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLL 513
            + G EGGTGAAP E+SNS+G+PL E L  VDD L G GLR++VK+I SGK+ SGF +V+NL++GAD+CNSARGMM ALGC+Q+L C TN CPTG+ATQDPKL  GL VP K+ERV +FQ+KTV  A +I+S+AG+ +P E++R+ I  R +      Y E+FP  +PG  L
Sbjct:  336 VDGGEGGTGAAPLEYSNSIGSPLREALSFVDDALTGFGLRENVKLIASGKIISGFHIVKNLAIGADICNSARGMMLALGCVQSLSCNTNRCPTGVATQDPKLFRGLAVPEKSERVYKFQKKTVFAAVDIMSSAGIKSPDEVNRTHIFRRVNQEQVKRYDEIFPLVKPGCFL 506
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BLAST of Ec-00_000720.1 vs. uniprot
Match: A0A3M1TPE1_9BACT (FMN-binding glutamate synthase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1TPE1_9BACT)

HSP 1 Score: 206 bits (525), Expect = 1.750e-60
Identity = 105/189 (55.56%), Postives = 129/189 (68.25%), Query Frame = 1 
Query:    1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDPKLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRRDGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAK 567
            + G+EGGTGAAP EFSNSVGTPL EGL  V + L GAGLRD ++++ +GK+ +GF +VR L+LGADLCN+AR M+FALGCIQALKC TN CPTG+ATQD  L  GL V SK  RVR FQ KTV +A E+I AAG+ +PA L    +  R         GE+FP  + G+ LEG A   LQ  W   + K
Sbjct:  361 VDGAEGGTGAAPIEFSNSVGTPLDEGLTFVHNALLGAGLRDRLRLVSAGKIATGFHIVRQLALGADLCNAARTMLFALGCIQALKCNTNRCPTGVATQDRALAKGLDVESKAWRVRNFQSKTVESALELIGAAGLDDPARLRPYHVVRRVSRTEVRHLGEIFPLVESGAFLEGKAPPELQAWWSVARRK 549
The following BLAST results are available for this feature:
BLAST of Ec-00_000720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI20_ECTSI1.380e-137100.00Ferredoxin-dependent glutamate synthase n=1 Tax=Ec... [more]
A0A6H5JVG8_9PHAE1.000e-12796.39Glu_synthase domain-containing protein n=1 Tax=Ect... [more]
A0A0L0FI59_9EUKA1.330e-7562.03Glu_synthase domain-containing protein (Fragment) ... [more]
A0A8J1ZSA7_9DINO7.760e-6455.74Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A7S2AMM4_9STRA5.330e-6356.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0G4J4Y0_PLABS1.630e-6257.98Glu_synthase domain-containing protein n=1 Tax=Pla... [more]
A0A830HEV5_9CHLO2.310e-6157.30Glu_synthase domain-containing protein n=1 Tax=Pyc... [more]
A0A3M1KJF6_9BACT4.160e-6153.01FMN-binding glutamate synthase family protein n=1 ... [more]
UPI001BDF179F6.450e-6157.89FMN-binding glutamate synthase family protein n=1 ... [more]
A0A3M1TPE1_9BACT1.750e-6055.56FMN-binding glutamate synthase family protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:938237..941836 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score390.2
Seed ortholog evalue5.7e-106
Seed eggNOG ortholog2880.D7FI20
Length588
Hectar predicted targeting categoryother localisation
Gene idEc-00_000720.1
EggNOG free text desc.L-glutamate biosynthetic process
EggNOG OGsCOG0069@1,KOG0399@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000720Ec-00_000720Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 938237..941836 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000720.1Ec-00_000720.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 938237..941836 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000720.1.5Ec-00_000720.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 938237..938406 -
Ec-00_000720.1.4Ec-00_000720.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 939524..939695 -
Ec-00_000720.1.3Ec-00_000720.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 941050..941145 -
Ec-00_000720.1.2Ec-00_000720.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 941616..941759 -
Ec-00_000720.1.1Ec-00_000720.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 941831..941836 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000720.1CDS:Ec-00_000720.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 938237..938406 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_000720.1 ID=Ec-00_000720.1|Name=Ec-00_000720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=196bp
MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGK
VTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDP
KLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRR
DGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAKLASTKK*
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spliced messenger RNA

>Ec-00_000720.1 ID=Ec-00_000720.1|Name=Ec-00_000720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=588bp|location=Sequence derived from alignment at chr_00:938237..941836- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGGCTCCGAGGGGGGGACGGGTGCCGCACCCCCCGAGTTTTCCAA
CTCCGTGGGGACCCCTCTGGTGGAAGGGCTGGTGCTGGTGGACGACCTGC
TGAGAGGGGCCGGGCTGAGGGATGACGTCAAGGTTATCTGCAGCGGGAAG
GTAACGTCTGGGTTCGGCGTCGTGAGGAACCTCTCTCTAGGGGCAGACCT
GTGCAACTCTGCGAGGGGCATGATGTTCGCGCTGGGCTGCATTCAGGCGT
TGAAGTGCGGGACGAACCACTGCCCGACGGGGATCGCCACCCAAGACCCC
AAGCTCATGAGCGGCCTGCACGTGCCGTCCAAGACCGAGAGGGTGCGGCG
GTTCCAGCAGAAGACCGTGCACACCGCTACTGAGATAATCTCCGCTGCCG
GCGTGTCGAATCCTGCAGAGCTGTCCAGGAGTATGATCAAGCTCCGGAGG
GACGGCGTGAACTCCGCCAGCTACGGCGAGCTCTTCCCCCCCTGCCAGCC
CGGTAGCCTGCTCGAGGGGGCGGCCGCGGAGCCCCTCCAGGAGATCTGGA
GACAGGGGCAGGCCAAGCTGGCGTCCACCAAGAAGTGA
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protein sequence of Ec-00_000720.1

>Ec-00_000720.1 ID=Ec-00_000720.1|Name=Ec-00_000720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=196bp
MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGK
VTSGFGVVRNLSLGADLCNSARGMMFALGCIQALKCGTNHCPTGIATQDP
KLMSGLHVPSKTERVRRFQQKTVHTATEIISAAGVSNPAELSRSMIKLRR
DGVNSASYGELFPPCQPGSLLEGAAAEPLQEIWRQGQAKLASTKK*
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mRNA from alignment at chr_00:938237..941836-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_000720.1 ID=Ec-00_000720.1|Name=Ec-00_000720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3600bp|location=Sequence derived from alignment at chr_00:938237..941836- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAAGCGTCTTCTATGTAAACGTAATGATCACCACCCCCCTTGACCTT
GAATGAACCAACCTCTGCCGCGTTCAGGGCTCCGAGGGGGGGACGGGTGC
CGCACCCCCCGAGTTTTCCAACTCCGTGGGGACCCCTCTGGTGGAAGGGC
TGGTGCTGGTGGACGACCTGCTGAGAGGGGCCGGGCTGAGGGATGACGTC
AAGGTTATCTGCAGCGGGAAGGTGGGTGGGTGGTGCAGAACGTTTTTAGG
AATCTGGATTTTTGGGGGTTTCTTTCCCCGCTTCTGCTTGTCATGGTATC
ACGGCACTACAGTTTTGCAGCCGCAGGGTCGATGGAAGCCAGCGAAAAAA
TCTGGAACTGCTGTTTGTTTTTTTTCATCGTGGACGTTTGTTTGCACTGT
ACCCGGTACGGGAGAAGAGGGGACCTCTAGACGACATCTTAAGTGCAAGA
TCGGCGCAACGACCGCTACTACACGACATCAGCAACAGCAACAACAACAA
TAGGAACATTATTTGTGGTGTAAGATAGTGCAGCAGCAACAACAACAACA
ATAGGAACATTATTTGTGGTGTAAGCTAGTGCAGCAGCAGCAACAACAAC
AATAGTAACAACACCAACGAAAACCATAACAGCAACAGCAACAACAGCAA
CGACCAGCCAACAACATGTGACTCTCGAACCCGTGCTGTAGGTAACGTCT
GGGTTCGGCGTCGTGAGGAACCTCTCTCTAGGGGCAGACCTGTGCAACTC
TGCGAGGGGCATGATGTTCGCGCTGGGCTGCATTCAGGTGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGGTCATACCCGCC
GCGGGGAACGTCAAGCAAGAGAGCGAGGAGGTCTTGAAAGGGAGTTGTTG
GGAGAGGGGGGTTGGGGGGAGTACGAGAGAGACGGAGGAAAGGAGAGGTA
AGACCCGGTCGCTGTTAGGTTGGAGAGCTTTCTGCCTTGTAGGCCTGGCA
CCCCCCCCCCCCCGGGGCAAACCCGGTTGGTAATGGCCCGGTTCTATTGG
AATTTAAATACACCAAATCCGGGAGCATCTGCTATTGGCCACGGTTCTGC
CAAAAGGGGGGGGGGGGGAACCCAAAAAATTCTGGTTTCAGGGCTTGGGG
TTTTTTAAAAAAAGGCGAGAGGTTTTTGAGGATCACGGGCGCCCTGGGCC
CCAAAAAACCCCCCCCCCATTTTCGCTTTTGCCATATGTCCCGGATCCAG
TGGGGGGGCCCAAAGCCTCCCCCCCCCCTCTTTTTGGTTTTCCCTTTAAC
AAATTCTTTTCTCTCCCGCCCCCCGGCTGGGGGGTTGGCTCTTTTGGTCT
TTCACCCTCCGGCCCCCCCCCGGTTTGGCTGGCTCACCCCCCCCGCCGAA
CTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAGTTTTTTGGTTTGTAGGCAGGACACCCCCCCCCCCCCGGGTCAA
TCGCGTTTGCTAGTGCCCGGCTACTATGGAATTTGATATACACTAATTCG
TGAAGCATCTGCTATTGCCAACGTTTCTGCAAAATGTGGTGGCGTGTGAT
CCGAATAATTCGTGTTTCAAGGTCTTGGGCTTTTTAAAATAATGTCGAGA
GTTTTTTGAGTATCACGGCAGCCATGGTCACTAAAGATCCCCACCTCAAT
TCTCGCTTTGCCTATATGTCCGGCATCAAGTGGGGCGTCCAAATGCATCC
CCCCCCTCTCTTTCTGTTTTCGCTTTTACGAATTCCTTCTCTCTCGCGCT
CCCTGTCTGGCGGCTTGCCTCTCTCGCTCTTCCACCCTCCGCCCTCCCCC
CGCTCTGCCTGTCTCACCCCCTCGTCCGACCTCCCTCTCTCGGCATTTCT
CTCTCGCCCACATGCACACACTCTCCCTCGCTTGCCGTCTCTATCCGTGT
CTCTGTCTCTGTCTCTGCCCCTCTGTTTCTCTCTCTCTCCTCCCCCCCCC
TCTCTGTATGATATCTCTCGCCACCGCACTTTTTGTCGACTCAAAACAAC
AAACACCACGGCATGGTACAACGAATACCATGGTATGGTAGGCGTTGAAG
TGCGGGACGAACCACTGCCCGACGGGGATCGCCACCCAAGACCCCAAGCT
CATGAGCGGCCTGCACGTGCCGTCCAAGACCGAGAGGGTGCGGCGGTTCC
AGCAGAAGACCGTGCACACCGCTACTGAGATAATCTCCGCTGCCGGCGTG
TCGAATCCTGCAGGTGCGCCGTTAAATCTCAGCCAGCCTGCTGAAGATGG
CGTGTGTTTTTGTTTTAGCATCGACCGCGCTAGCTAACCGGCTGGCCATT
GAGGAGACTTCAGTCTCTGTGCGGCTGAAAACAGAAATGACGGGAATGTG
TGCGTGTTATTTTTTTGTTTGCATTGAACGCGCTAACCGGGTGGCCAATG
AAAAGACGTCAGTCTCAGTACGGCTGAAAAACGCGAAATGCTGCTAACAA
AGGCGACATGATCTGGGGCCCTGTGAGTAGGCGTCACGACGGAGGCTATG
CTACTCTTCGCCGCATTTGAAGACAGAAAACTCGCGCGTGTGTGTGTTCG
TCCTGTCGATCTACTCCGGCGCCAGTCTACATGCCTTTCGGTGTATGTGT
CTGACGTAGGTACCAGCCGAGGTCACACAAGAGGAAGGGGACACAGGGGA
TGTATTTGTTGGTGGAGGCTTTTGGTTCAGTATCGGACCGAATTTTTTTT
TCTGGAAAATAGTGTGGAGGCATCAGATGGCTTGCCCAGGACGCTGAGGG
TACAGTATGGGTTTGTGTTTTGCATGCGGGCGTGTTCGTTGTTGCTTTGG
TGGTGTTTTTCTCACAGCAAGTAGCGATGAGATTTAGCTCAAAGACGGCT
TCCATCTGTTTTATGGTATGTGCTAGTCTTATCTTCACATTGCAACCAGT
TGTCGTTTGAGTGGACGTTTTGTTTTTACTCTTCGTCGTCCGGACAGCTG
CCGTTGCCGCGCAGCAGCAGCAGCAGCAACAGTAGCAAATGCTGAGGACG
AACTCTCGTGTCCTCTCTCCTTGTCTGTGCTGGCTGTACCGACAAAATGC
CAACCAATTGGCTTAAGCTTGTCCTCGCTGCTCCACCGAGATGTGGCACC
GCTTGCTCGCCGCATCCGACCGGGAGCCCCTTTCATCGTATCACACACCC
TATTGCCGAGGTCCATAAAGTTAACATCTCGTTCTAGAGAGAATCAGGAT
ACCGACTGTTGTAGTAACTGATTTGTTGACGAATTGCGCCCAACACGCAC
AACTTCGACGCCACTGACTTATGTGCAGCAACAACCAACCATATGCTACA
TACTTCTCTTACCATCTTATGCAAACGCAGAGCTGTCCAGGAGTATGATC
AAGCTCCGGAGGGACGGCGTGAACTCCGCCAGCTACGGCGAGCTCTTCCC
CCCCTGCCAGCCCGGTAGCCTGCTCGAGGGGGCGGCCGCGGAGCCCCTCC
AGGAGATCTGGAGACAGGGGCAGGCCAAGCTGGCGTCCACCAAGAAGTGA
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Coding sequence (CDS) from alignment at chr_00:938237..941836-

>Ec-00_000720.1 ID=Ec-00_000720.1|Name=Ec-00_000720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=588bp|location=Sequence derived from alignment at chr_00:938237..941836- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAAGGCTCCGAGGGGGGGACGGGTGCCGCACCCCCCGAGTTTTCCAA
CTCCGTGGGGACCCCTCTGGTGGAAGGGCTGGTGCTGGTGGACGACCTGC
TGAGAGGGGCCGGGCTGAGGGATGACGTCAAGGTTATCTGCAGCGGGAAG
GTAACGTCTGGGTTCGGCGTCGTGAGGAACCTCTCTCTAGGGGCAGACCT
GTGCAACTCTGCGAGGGGCATGATGTTCGCGCTGGGCTGCATTCAGGCGT
TGAAGTGCGGGACGAACCACTGCCCGACGGGGATCGCCACCCAAGACCCC
AAGCTCATGAGCGGCCTGCACGTGCCGTCCAAGACCGAGAGGGTGCGGCG
GTTCCAGCAGAAGACCGTGCACACCGCTACTGAGATAATCTCCGCTGCCG
GCGTGTCGAATCCTGCAGAGCTGTCCAGGAGTATGATCAAGCTCCGGAGG
GACGGCGTGAACTCCGCCAGCTACGGCGAGCTCTTCCCCCCCTGCCAGCC
CGGTAGCCTGCTCGAGGGGGCGGCCGCGGAGCCCCTCCAGGAGATCTGGA
GACAGGGGCAGGCCAAGCTGGCGTCCACCAAGAAGTGA
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Synonyms
The feature 'Ec-00_000720.1' has the following synonyms
Synonym
Esi1167_0001
Esi_1167_0001