Ec-00_000710.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_000710.1 vs. uniprot
Match: D7FI19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI19_ECTSI) HSP 1 Score: 359 bits (921), Expect = 1.060e-124 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1 Query: 1 MAVVIDECPPLAKLFEGGFLEKRFQEVFQVPSAVLARSGAGAEASEVRDAMSIALTRKGTKGAAATAGPNRGGDLAGDAPEGARGGRGSASPRGXXXXXXXXXXRKGARGSGSGVEAEAWPGLEEALKESEKKVTPVAEAGPATAPVVGSSGQGIGMRARPAGGEAKDESAKRIRNRCNRVHVKVIPGPAKLVHLQGCFGQG 606 MAVVIDECPPLAKLFEGGFLEKRFQEVFQVPSAVLARSGAGAEASEVRDAMSIALTRKGTKGAAATAGPNRGGDLAGDAPEGARGGRGSASPRGXXXXXXXXXXRKGARGSGSGVEAEAWPGLEEALKESEKKVTPVAEAGPATAPVVGSSGQGIGMRARPAGGEAKDESAKRIRNRCNRVHVKVIPGPAKLVHLQGCFGQG Sbjct: 1 MAVVIDECPPLAKLFEGGFLEKRFQEVFQVPSAVLARSGAGAEASEVRDAMSIALTRKGTKGAAATAGPNRGGDLAGDAPEGARGGRGSASPRGXXXXXXXXXXRKGARGSGSGVEAEAWPGLEEALKESEKKVTPVAEAGPATAPVVGSSGQGIGMRARPAGGEAKDESAKRIRNRCNRVHVKVIPGPAKLVHLQGCFGQG 202 The following BLAST results are available for this feature:
BLAST of Ec-00_000710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_000710.1 ID=Ec-00_000710.1|Name=Ec-00_000710.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=203bpback to top spliced messenger RNA >Ec-00_000710.1 ID=Ec-00_000710.1|Name=Ec-00_000710.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=609bp|location=Sequence derived from alignment at chr_00:933980..935692- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGGCCGTCGTCATCGACGAGTGCCCGCCCCTGGCAAAGCTTTTCGAGGGback to top protein sequence of Ec-00_000710.1 >Ec-00_000710.1 ID=Ec-00_000710.1|Name=Ec-00_000710.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=203bp MAVVIDECPPLAKLFEGGFLEKRFQEVFQVPSAVLARSGAGAEASEVRDAback to top mRNA from alignment at chr_00:933980..935692- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_000710.1 ID=Ec-00_000710.1|Name=Ec-00_000710.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1713bp|location=Sequence derived from alignment at chr_00:933980..935692- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:933980..935692- >Ec-00_000710.1 ID=Ec-00_000710.1|Name=Ec-00_000710.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=609bp|location=Sequence derived from alignment at chr_00:933980..935692- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_000710.1' has the following synonyms
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