Ec-00_000520.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_000520.1
Unique Name	Ec-00_000520.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	222

Homology

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BLAST of Ec-00_000520.1 vs. uniprot
Match: D7FHV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV0_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 1.690e-144
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1

Query:    1 MSPLTPPPHPETTFLFQFITAVYLEKAVYDGGAISVDTVSGGDSSGEETSASTQALNATVDDENSVHLLCQNTTFVGNVAGERGGSLYSSTVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYTW 663
            MSPLTPPPHPETTFLFQFITAVYLEKAVYDGGAISVDTVSGGDSSGEETSASTQALNATVDDENSVHLLCQNTTFVGNVAGERGGSLYSSTVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYTW
Sbjct:    1 MSPLTPPPHPETTFLFQFITAVYLEKAVYDGGAISVDTVSGGDSSGEETSASTQALNATVDDENSVHLLCQNTTFVGNVAGERGGSLYSSTVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYTW 221

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BLAST of Ec-00_000520.1 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 7.120e-74
Identity = 135/149 (90.60%), Postives = 138/149 (92.62%), Query Frame = 1

Query:  217 TTFVGNVAGERGGSLYSSTVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYTW 663
            TT V +      GS ++  VVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYTW
Sbjct:  518 TTGVSHTCHSCDGSYWAGMVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYTW 666

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BLAST of Ec-00_000520.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 1.160e-65
Identity = 121/129 (93.80%), Postives = 127/129 (98.45%), Query Frame = 1

Query:  274 VVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYT 660
            VVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSR+IRT+PFHKLKIPFVVLQI+TQYASITSIEFAP+FQTFLSTISVINLDLGWVLTS+CIIDVNFYGNL+AATVGPLM LLVLA TYLYT
Sbjct:    2 VVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRKIRTMPFHKLKIPFVVLQIMTQYASITSIEFAPMFQTFLSTISVINLDLGWVLTSLCIIDVNFYGNLLAATVGPLMALLVLAVTYLYT 130

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BLAST of Ec-00_000520.1 vs. uniprot
Match: A0A6H5JUM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM3_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.710e-25
Identity = 60/66 (90.91%), Postives = 62/66 (93.94%), Query Frame = 1

Query:   76 KAVYDGGAISVDTVSGGDSSGEETSASTQALNATVDDENSVHLLCQNTTFVGNVAGERGGSLYSST 273
             AVYDGGAISVDTVSGG SSGEETSAS QALNATVDDE+SV LLCQNTTFVGNVAGERGGSLYS+T
Sbjct:  591 SAVYDGGAISVDTVSGGSSSGEETSASMQALNATVDDESSVDLLCQNTTFVGNVAGERGGSLYSNT 656

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BLAST of Ec-00_000520.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 8.370e-18
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 1

Query:  382 SVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLY 657
            S M  +++ +P HKLKIP VV QI+TQYA IT+++F P F   L  + V+NLD+GWVL++ CI   NFYG L+  T+ P+ + L L  T++Y
Sbjct: 1203 SRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMY 1294

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BLAST of Ec-00_000520.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.880e-17
Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 1

Query:  382 SVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLY 657
            S M  +++ +P HKLKIP VV QI+TQYA IT+++F P +   L  + V+NLD+GWVL++ CI   NFYG L+  T+ P++  L L  T++Y
Sbjct: 1499 SRMVSKVKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIVFGLALCCTFMY 1590

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BLAST of Ec-00_000520.1 vs. uniprot
Match: A0A836CF88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF88_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.920e-14
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 1

Query:  382 SVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATY 651
            S   R  R + + K KIP V  QII+Q+  IT IE+ PV   FL+ ++V+NL+LGW L++ C+++VNFY  L+ AT+ PL V  VL ATY
Sbjct:  593 STFVRIAREMDWGKFKIPLVAFQIISQFPQITGIEYPPVLARFLAALNVLNLNLGWWLSATCLLEVNFYQQLLLATLTPLCVTAVLVATY 682

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BLAST of Ec-00_000520.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.320e-13
Identity = 43/119 (36.13%), Postives = 76/119 (63.87%), Query Frame = 1

Query:  295 GVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATY 651
            GV LV+  ++ + D      ++   +T  S+ +R    IP   +KI  V  QI+TQ++S+ ++ +  V++ FLS ++++N + G++L++ C++D NFYG L+ AT+GPL+VL  LA TY
Sbjct:   21 GVALVIANLVRVVDDDNTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTY 139

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BLAST of Ec-00_000520.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 8.690e-13
Identity = 46/134 (34.33%), Postives = 79/134 (58.96%), Query Frame = 1

Query:  250 GGSLYSSTVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATY 651
            GG +++  + V+AL      V VV+++  + G     +  E    V+ R    +P   +KI  V  QI+TQ+AS  ++ +  V+Q FL  + V   DLGW++++ C++D+ F+G L+AAT+GP+  +L+LA TY
Sbjct: 1039 GGIVFAVGMAVLALF-----VAVVVIMYIMSG-----EAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTY 1162

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BLAST of Ec-00_000520.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 8.870e-13
Identity = 34/89 (38.20%), Postives = 64/89 (71.91%), Query Frame = 1

Query:  385 VMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATY 651
            V+ R ++ +P   +KI  VV QI+TQ++S+ ++ +  V+Q FL  ++++N D+ W+ ++ C+++V+F+G L+ AT+GPL+ L +LA TY
Sbjct: 1422 VIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITY 1510

The following BLAST results are available for this feature:

BLAST of Ec-00_000520.1 vs. uniprot

BLAST of Ec-00_000520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHV0_ECTSI	1.690e-144	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LRF7_ECTSI	7.120e-74	90.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JU27_9PHAE	1.160e-65	93.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUM3_9PHAE	3.710e-25	90.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LRF9_ECTSI	8.370e-18	47.83	Polymorphic outer membrane protein n=1 Tax=Ectocar...	[more]
A0A6H5JU65_9PHAE	2.880e-17	46.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CF88_9STRA	2.920e-14	47.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7FPF7_ECTSI	1.320e-13	36.13	Probable extracellular nuclease (ISS) n=1 Tax=Ecto...	[more]
D7G2X5_ECTSI	8.690e-13	34.33	Adhesin-like protein n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5JY65_9PHAE	8.870e-13	38.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:723206..733146 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	90.5
Seed ortholog evalue	1.1e-15
Seed eggNOG ortholog	2880.D8LRF9
Length	666
Hectar predicted targeting category	other localisation
Gene id	Ec-00_000520.1
EggNOG OGs	2BFIX@1,2S176@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_000520	Ec-00_000520	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 723206..733146 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000520.1	Ec-00_000520.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 723206..733146 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000520.1.1	Ec-00_000520.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 723206..723284 +
Ec-00_000520.1.2	Ec-00_000520.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 723353..723546 +
Ec-00_000520.1.3	Ec-00_000520.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 731165..731341 +
Ec-00_000520.1.4	Ec-00_000520.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 732451..732576 +
Ec-00_000520.1.5	Ec-00_000520.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 733057..733146 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000520.1	CDS:Ec-00_000520.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 723206..723284 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:723206..733146+
coding sequence from alignment at chr_00:723206..733146+

mRNA sequence

>Ec-00_000520.1 ID=Ec-00_000520.1|Name=Ec-00_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=222bp
MSPLTPPPHPETTFLFQFITAVYLEKAVYDGGAISVDTVSGGDSSGEETS
ASTQALNATVDDENSVHLLCQNTTFVGNVAGERGGSLYSSTVVVMALTGV
VLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQ
IITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLI
AATVGPLMVLLVLAATYLYTW*

spliced messenger RNA

>Ec-00_000520.1 ID=Ec-00_000520.1|Name=Ec-00_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=666bp|location=Sequence derived from alignment at chr_00:723206..733146+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCCTCTCACCCCTCCCCCCCACCCCGAAACAACCTTCCTGTTCCA
ATTTATCACTGCGGTTTATCTCGAGAAAGCCGTCTACGATGGCGGCGCGA
TATCCGTAGACACCGTCTCTGGCGGCGACAGCTCGGGGGAGGAGACGAGC
GCTTCGACGCAGGCCCTGAATGCCACGGTAGACGACGAGAACTCGGTGCA
CCTACTCTGCCAGAACACAACCTTCGTCGGCAACGTTGCCGGCGAGAGAG
GCGGCTCTCTCTACTCCAGCACGGTGGTGGTGATGGCTCTGACCGGCGTG
GTGCTGGTGGTCGGGGTGGTGATCGTCCTCAACGATCTCGTGGGGAATCC
TGCTCTGACCGACCTCAGCGAGACCCACTTCTCGGTGATGTCGAGGAGGA
TACGGACCATTCCGTTCCACAAGCTCAAGATTCCCTTCGTCGTGCTCCAG
ATCATAACGCAGTACGCGTCCATCACGTCGATCGAGTTCGCACCGGTGTT
TCAGACTTTCTTGTCTACCATCAGTGTCATCAACCTGGATTTGGGGTGGG
TCTTGACGTCCGTGTGCATCATCGATGTTAACTTCTACGGCAATCTGATT
GCGGCAACAGTCGGACCGCTGATGGTGTTGCTCGTGCTGGCCGCGACGTA
CTTGTACACCTGGTGA

protein sequence of Ec-00_000520.1

>Ec-00_000520.1 ID=Ec-00_000520.1|Name=Ec-00_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=222bp
MSPLTPPPHPETTFLFQFITAVYLEKAVYDGGAISVDTVSGGDSSGEETS
ASTQALNATVDDENSVHLLCQNTTFVGNVAGERGGSLYSSTVVVMALTGV
VLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQ
IITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLI
AATVGPLMVLLVLAATYLYTW*

mRNA from alignment at chr_00:723206..733146+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_000520.1 ID=Ec-00_000520.1|Name=Ec-00_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9941bp|location=Sequence derived from alignment at chr_00:723206..733146+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCTCCTCTCACCCCTCCCCCCCACCCCGAAACAACCTTCCTGTTCCA
ATTTATCACTGCGGTTTATCTCGAGAAAGGTTAGTCTTTCTTGAATTGAA
TGTATCACGTATATTTCTAAAACCCACCACCTTGTGTTCGTTCACAGCCG
TCTACGATGGCGGCGCGATATCCGTAGACACCGTCTCTGGCGGCGACAGC
TCGGGGGAGGAGACGAGCGCTTCGACGCAGGCCCTGAATGCCACGGTAGA
CGACGAGAACTCGGTGCACCTACTCTGCCAGAACACAACCTTCGTCGGCA
ACGTTGCCGGCGAGAGAGGCGGCTCTCTCTACTCCAGCACGGTAAGAAGG
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NNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCTCTATTTCATAG
AATAATAGTAGAATTATCGGGAAGGCGCCCCCCCCCTCTTGGTTGAGGCA
TTGGTGGTGTTGGTGATGTCTCCGTTCCTTGGACTGGCACATACCAATGG
TAGCTATCGTCCGCTACCCACCCCTTCCTGTTACCTGTTACCTGTTATTG
ACGATGAAGGTGGTGGTGATGGCTCTGACCGGCGTGGTGCTGGTGGTCGG
GGTGGTGATCGTCCTCAACGATCTCGTGGGGAATCCTGCTCTGACCGACC
TCAGCGAGACCCACTTCTCGGTGATGTCGAGGAGGATACGGACCATTCCG
TTCCACAAGCTCAAGATTCCCTTCGTCGTGCTCCAGGTATATTGGTTTTA
TTTGATTTGTGTTGTTGTTTGGTCTCTGTTTGTGGTTCTGGTGTGCCAGG
GTTGTGTGTATGCTAGCGTGCGGCCTCCCAGAACTACAGCTCTTGTACGA
TGGAAGGAACAAGAAATCACAAGACCTTTGTTTTTGGGTTGATGCGGTCG
ACGTCTCGTTTTTTTCGTATTTGATCCAGACCTTCGTGTTGTACATATGA
GTGTCGTTTAATTGTTCTCCTTTTTTTATTGAAGGATTCTTCCCTGTCAG
TTCTTCTTGTTTTCATCCTTGATTTTTTTCCTTCTCGCCTCTGTATTATT
TCTTGACGGCAAACCGCCTATGATTTCGTACTTACGTTCATTCTTGTTGT
CATGTTCACCACGTGCGACGCAAGAAAACACACCCCCTGGACCGATTTTC
GAAGCTCGATTTATCATCAGCAGAAAGAGTCGTAGCACCGAAGTGGCGAC
GTTGAAGCCGTCTGGTCGAGAGCTTTCCGAAAACGTATCGTTTCCTGTAG
GCATCCTCTTCGTCGTGGAGTAATCGAGCTCTGAAAATCGGTCCAGATGG
TGTGTTTCTTGTGTCATCTTCGGTACCCGAAAAGGTTGTCAACGGCAACC
GTAGGTTTCACAATATATCACACGCCCTGGGCCGATTTATGATAGTGGAT
TGCCCCTGGACAACAAGTAATTCATCCTTCCGGGACAAGAAAATATCTTG
TGTTTTTTTTATATATATTCTGAGTTTTTGAAGGCAAAGTCAAGCGATAC
GTTTTCGGAAATATCTTGAGACGGTTCCATTCCGACGACGCTCCGTGTGC
TGTTGAGATTGGAGCTTTTTTTGGTGTGTGTGATCTGTCGCTCGTCTCAC
AGCAATGCCCGAGGAACTAAAGCCGAAATGAAATTAGTTCAAAGGTAGTG
AGCATCTGCGCCTAACAACTCATTAATTTTCATTCGCGCATGTCCTTATT
TCATATTCATGTTCCCTTTTGTGGCTCGTTCGACCCTCGAAGTACAATGA
TTCGATTGATTGCAAATATTCCTTTTTTCGCCTGCGATGCATAAGCAAAC
ATCTTTCGTTCCCTTCTTTTTGTTGTCGTGTGTTCGCATCCGCAGATCAT
AACGCAGTACGCGTCCATCACGTCGATCGAGTTCGCACCGGTGTTTCAGA
CTTTCTTGTCTACCATCAGTGTCATCAACCTGGATTTGGGGTGGGTCTTG
ACGTCCGTGTGCATCATCGATGTGAGTTACGGTAGAGGTCCCTGTTTAGT
GCAGTTGGAATAGCGTCGGTGCCCGGTATCGTGCCTGCGTTTTCGGCGGG
CACACACTGAATTTCCAAGTCATTCTCAGTACTTTGAATAGTGCCGGTCC
GGTAAAATTGCCGATAATTTTTCTGGGCACATACCGGCACCTCTACTGTA
CTATGGTTGGGCTGCCGCCCTATGGATGTGAGCTGGATGATGATGGTGAT
GGTGTCTTGACTGCTTGGTGTCAGGCGCTGTTGGTGCGAGACGATTGATG
ATGTGGGTGGAGTAAGCCGAGGTCTCCAGCAGCTTTGAAACTTTGTTTTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTCGTCGT
CGTGGTTGTTGTTGTTGAAATGTACCGTTCCTCTTTGCTGCCGCTGTTGC
CAACCGTCTTCGTCTCCAATGAACCGCTGCTGCTGCTGCTGGTTTCATTA
GGTTAACTTCTACGGCAATCTGATTGCGGCAACAGTCGGACCGCTGATGG
TGTTGCTCGTGCTGGCCGCGACGTACTTGTACACCTGGTGA

Coding sequence (CDS) from alignment at chr_00:723206..733146+

>Ec-00_000520.1 ID=Ec-00_000520.1|Name=Ec-00_000520.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=666bp|location=Sequence derived from alignment at chr_00:723206..733146+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCTCCTCTCACCCCTCCCCCCCACCCCGAAACAACCTTCCTGTTCCA
ATTTATCACTGCGGTTTATCTCGAGAAAGCCGTCTACGATGGCGGCGCGA
TATCCGTAGACACCGTCTCTGGCGGCGACAGCTCGGGGGAGGAGACGAGC
GCTTCGACGCAGGCCCTGAATGCCACGGTAGACGACGAGAACTCGGTGCA
CCTACTCTGCCAGAACACAACCTTCGTCGGCAACGTTGCCGGCGAGAGAG
GCGGCTCTCTCTACTCCAGCACGGTGGTGGTGATGGCTCTGACCGGCGTG
GTGCTGGTGGTCGGGGTGGTGATCGTCCTCAACGATCTCGTGGGGAATCC
TGCTCTGACCGACCTCAGCGAGACCCACTTCTCGGTGATGTCGAGGAGGA
TACGGACCATTCCGTTCCACAAGCTCAAGATTCCCTTCGTCGTGCTCCAG
ATCATAACGCAGTACGCGTCCATCACGTCGATCGAGTTCGCACCGGTGTT
TCAGACTTTCTTGTCTACCATCAGTGTCATCAACCTGGATTTGGGGTGGG
TCTTGACGTCCGTGTGCATCATCGATGTTAACTTCTACGGCAATCTGATT
GCGGCAACAGTCGGACCGCTGATGGTGTTGCTCGTGCTGGCCGCGACGTA
CTTGTACACCTGGTGA

Synonyms

The feature 'Ec-00_000520.1' has the following synonyms


Synonym
Esi1119_0003
Esi_1119_0003