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Homology
BLAST of Ec-00_000280.1 vs. uniprot
Match: D7FLB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB4_ECTSI) HSP 1 Score: 232 bits (591), Expect = 6.440e-69 Identity = 181/342 (52.92%), Postives = 192/342 (56.14%), Query Frame = -2
Query: 45 PGSASSQPSSRRPSLPGFSSMDDGGGAASGAAATASPGVTAPRASSTRRVSAEFGDISSSARPAAASSFGGVSHGDGTAFTVSSSMKPENAMASVMGVWAQTRPHASSYTSCRLVTRVGVLCTLMFCARRSARG*LMVVFAPTSVVSAFPSSQTK*HRTHDFSLTRRWIFRPRSCAIRTICISQVQLVFSPMFG-GSAETAATPVVG-SFGF------------------------------------------LVVMATHA------------------------QVALPMVEVAIGLMKVIIDDEELDNMAMAIKRVRRWAVLEKGGSSNTVFQKE*VQR 866
PGSASSQPSSRRPSLPGFSSMDDGGGAASGAAATASPGVTAPRASSTRRVSAEFGDISSSARPAAASSFGGVSHGDGTAFTVSSSMKPENAMASVMGV P A+ RV + A + +VF+P SA ++ H R S I QL FS FG G A+ A P S+GF VV T A +VALPMVEVAIGLMKVIIDDEELDNMAMAIKRVRRWAVLEKGGSSNTVFQKE +R
Sbjct: 91 PGSASSQPSSRRPSLPGFSSMDDGGGAASGAAATASPGVTAPRASSTRRVSAEFGDISSSARPAAASSFGGVSHGDGTAFTVSSSMKPENAMASVMGVLG---PDAAP--------RVFIYLLQEHMAEH-----VQLVFSPMFGGSAETAATPAVHSGRQSGGANRGFTAGISVVWSHAIIGDQQLNFS--FGMGRADPATNPWCRMSYGFWEPGGMKCAAFMMLESLSDEDSDQSTDEILRAASRAVIAFDPAVVAKTDAHRTGGWDSLEPDDVWGGGTVLFVDKVALPMVEVAIGLMKVIIDDEELDNMAMAIKRVRRWAVLEKGGSSNTVFQKEFFRR 414
BLAST of Ec-00_000280.1 vs. uniprot
Match: D7G1E3_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E3_ECTSI) HSP 1 Score: 169 bits (427), Expect = 2.640e-46 Identity = 120/210 (57.14%), Postives = 123/210 (58.57%), Query Frame = -2
Query: 246 ETAPGSASSQPSSRRPSLPGFSSMDDGGGAASGAAATASPGVTAPRASSTRRVSAEFGDISSSARPAAASSFGGVSHGDGTAFTVSSSMKPENAMASVMGVWAQTRPHASSYTSCRLVTRVGVLCTLMFCARRSARG*LMVVFAPTSVVSAFPSSQTK*HRTHDFSLTRRWIFRPRSCAIRTICISQVQLVFSPMFGGSAETAATPVVGS 875
ETAP SASSQPSSRRPSLPGFSSMDDGGGAASGAAATASPGVTAPRASSTRRVSAEFGDISSSARP AASSFGGVSHGDGT F VSSSMK ENAMASVMGV P A AP + + VQLVF+PMFGGSAETAATP V S
Sbjct: 90 ETAPVSASSQPSSRRPSLPGFSSMDDGGGAASGAAATASPGVTAPRASSTRRVSAEFGDISSSARPVAASSFGGVSHGDGTDFMVSSSMKRENAMASVMGVLG---PDA----------------------------------APRVFIYLLQEHMAE----------------------------HVQLVFAPMFGGSAETAATPAVHS 234
BLAST of Ec-00_000280.1 vs. uniprot
Match: D7FI40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI40_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 4.520e-15 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = -2
Query: 45 MKVIIDDEELDNMAMAIKRVRRWAVLEKGGSSNTVFQKE*VQR 173
MKVIIDDEELDNMAMAIKRVRRWAVLEKGGSSNTVFQKE +R
Sbjct: 1 MKVIIDDEELDNMAMAIKRVRRWAVLEKGGSSNTVFQKEFFRR 43
BLAST of Ec-00_000280.1 vs. uniprot
Match: D7G5N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N5_ECTSI) HSP 1 Score: 54.3 bits (129), Expect = 2.790e-6 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = -2
Query: 57 AQVALPMVEVAIGLMKVIIDD-EELDNMAMAIKRVRRWAVLEKGGSSNTVFQKE 215
++V LP++E+AI MKV+ DD + D + RV RWA+LE+GGS N VFQKE
Sbjct: 11 SEVVLPLLELAIQQMKVLPDDGDSTDAFSKTRSRVNRWAILERGGSPNQVFQKE 64
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 966 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-00_000280.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_000280.1 ID=Ec-00_000280.1|Name=Ec-00_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=322bp MFYLGGLNVAYTPDLRCTHSFWNTVLDDPPFSSTAQRLTRLMAMAMLSNS SSSMITFISPMATSTIGRATCACVAMTTRKPNDPTTGVAAVSALPPNMGE KTSCTCEMHIVRIAQDRGRKIQRRVREKSWVLCYLVCDDGNAETTLVGAN TTINHPRAERRAQNINVHKTPTRVTSRHEVYEDAWGRVWAQTPMTLAMAF SGFMDDDTVKAVPSPWLTPPKLEAAAGRADEEMSPNSADTLRVEEARGAV TPGDAVAAAPLAAPPPSSILENPGSDGRRLDGCEDADPGAVSAALALLTD ERSASCSSSSGSSSFISSRCC* back to topspliced messenger RNA >Ec-00_000280.1 ID=Ec-00_000280.1|Name=Ec-00_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=966bp|location=Sequence derived from alignment at chr_00:450100..454368- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTTATCTGGGTGGTCTCAACGTTGCCTACACGCCGGACCTACGTTG CACTCACTCTTTCTGGAACACGGTATTGGACGACCCGCCCTTCTCGAGCA CGGCCCAGCGTCTGACCCGCTTGATGGCCATGGCCATGTTGTCCAACTCC TCGTCGTCGATGATCACCTTCATCAGCCCAATGGCCACCTCCACCATTGG CAGGGCTACCTGTGCGTGTGTTGCCATGACAACAAGGAAGCCAAACGACC CCACAACAGGAGTCGCCGCGGTCTCCGCGCTGCCGCCGAACATGGGGGAG AAAACCAGCTGCACCTGCGAGATGCATATCGTCCGTATAGCACAAGATCG GGGGCGGAAAATCCAGCGACGCGTGAGAGAGAAGTCGTGGGTTCTATGCT ATTTAGTCTGCGACGATGGGAATGCTGAAACCACGCTTGTCGGTGCAAAC ACAACCATCAATCATCCTCGGGCTGAACGGCGAGCACAAAACATCAATGT ACACAAGACTCCTACTCGTGTCACCAGTCGGCATGAGGTATATGAAGACG CGTGGGGCCGCGTCTGGGCCCAAACACCCATGACGCTAGCCATGGCGTTT TCAGGCTTCATGGATGACGACACCGTGAAAGCTGTGCCGTCGCCGTGGCT GACACCTCCAAAGCTGGAGGCAGCGGCAGGGCGCGCGGACGAAGAAATGT CGCCGAACTCCGCCGACACCCTTCGAGTGGAGGAGGCACGCGGCGCCGTC ACGCCAGGCGACGCCGTGGCCGCGGCACCGCTGGCGGCGCCGCCACCGTC GTCCATACTGGAAAATCCTGGCAGTGATGGCCGGCGGCTCGACGGCTGCG AAGATGCCGACCCAGGAGCCGTTTCGGCAGCCTTAGCGCTCCTGACGGAC GAGAGATCCGCCTCTTGCTCTTCCTCCTCGGGCTCCTCCTCATTCATCTC ATCACGCTGCTGCTGA back to topprotein sequence of Ec-00_000280.1 >Ec-00_000280.1 ID=Ec-00_000280.1|Name=Ec-00_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=322bp
MFYLGGLNVAYTPDLRCTHSFWNTVLDDPPFSSTAQRLTRLMAMAMLSNS SSSMITFISPMATSTIGRATCACVAMTTRKPNDPTTGVAAVSALPPNMGE KTSCTCEMHIVRIAQDRGRKIQRRVREKSWVLCYLVCDDGNAETTLVGAN TTINHPRAERRAQNINVHKTPTRVTSRHEVYEDAWGRVWAQTPMTLAMAF SGFMDDDTVKAVPSPWLTPPKLEAAAGRADEEMSPNSADTLRVEEARGAV TPGDAVAAAPLAAPPPSSILENPGSDGRRLDGCEDADPGAVSAALALLTD ERSASCSSSSGSSSFISSRCC* back to topmRNA from alignment at chr_00:450100..454368- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-00_000280.1 ID=Ec-00_000280.1|Name=Ec-00_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4269bp|location=Sequence derived from alignment at chr_00:450100..454368- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGTTTTATCTGGGTGGTCTCAACGTTGCCTACACGCCGGACCTACGTTG
CACTCACTCTTTCTGGAACACGGTATTGGACGACCCGCCCTTCTCGAGCA
CGGCCCAGCGTCTGACCCGCTTGATGGCCATGGCCATGTTGTCCAACTCC
TCGTCGTCGATGATCACCTTCATCAGCCCAATGGCCACCTCCACCATTGG
CAGGGCTACCTGTGCGTGTGTTGCCATGACAACAAGGAAGCCAAACGACC
CCACAACAGGTACGAGAGGTGCAGGGAGTGAGTGTGAGTAGAATAATAGA
ATGCATCACACGCGGCGACCGAACGGAGTACGCGGCATCGAGGACATAAT
AAACACCGGTCTTCAAGTCATGAGACAAAGAAAATCAAGACGTGGCTGCA
CCGGCTACACGCTAGGCTGTCCAAACTTGCACGCTCTTCAAGTCATGAGA
CAAAGAAAATCAAGACGTGGCTGCACCGGCTACACGCTAGGCTGTCCAAA
CTTGCACGGTCTTCAAGTCATGACCAAACTAATTTTAATACATGGCTGGA
AGGGCTACACGCTAGGCTGTCCAAATTTGTGCTCACCTTGTCAACGAACA
GGACAGTCCCCCCCCCCCATACGTCGTCAGGCTCCAAGGAATCCCACCCT
CCCGTCCTGTGGGCCTGTAGGGGCAAGTCGAGGATGGCTCCGACTAAGAT
GCGCATGTCCTGCGTGGGTTAGGGAGAAATAGACACGAAGAGGGGTCGAA
GGAAGTAAAGAGGGTATTAGCCATCGTTTGTATATAATCGAGGATCGTCG
ATTCCGGGCACGCTTTGAAACTTGCCGCGAAACTACTGCACACATATGCC
ACGCAACAACAATAACATGACCGACCGATTGGGTTGGTACGTTTAGACGC
GAAGCGGGGGTCGGCAGGTTGCCGTTTTCTGCTGGTGGCGCAAGAGATAA
TGTGTTTCTACGACCCACCACGCGCGACATGACACATCTGTACGTACTCA
CGTCGGTCTTTGCCACGACCGCAGGGTCAAATGCAATGACGGCCCGGGAC
GCTGCCCTCAGGATCTCGTCCGTGCTCTGGTCGCTGTCTTCGTCCGACTA
ACTCTCCAGCACTGAGAGGATGTAGATCATGACGGCCAGCCTCACGGCCT
TGTGCCACGTGCGGACTGGAGCGCGGGCCGAAAGGTCTCTGTGTTTGGAG
GGCGTTAAGACATAAATGACAGACGGTTTTGAACGGACTTCGTCAGGCAC
GCACGGACAAAGAGGGCACAACTGTTAAGAACCTTTTGCCGACCCAGGAG
ACAACAAACAGAATGTAGCTGCCACATCGGAACACCCCCCCTCCCCCTCC
CATGCGAGGTCTATGGTCTTAACGACAACGGCATGCATGATACCTAGTAC
ACCCCCCCCCCCCCGAAAATGCAGACGGCGCAACGCATCACGTTACGTTC
CACGGCGGTGAATCGCGGGTGTAGCGCTGCAGCGAGACATCTGTAATGAG
TCACCCGACAGTATTGATACTCGCTCGTGTACTAGTCGCCACAATAAACA
GCCCGCCACAAGCAAGGTAAGTCTATTTCCGGACGCATGTGCGATTAGAG
CAGGTCGTTTGTCCGACTCCTACGAAAGTGGTAGGCTTGTTGCGTGGCGT
GAACGTCCATGTTCGACATCGAGGCGAAATGTAGTGTGTTTCACGTCAGT
CTTAGTACGGGAGAAATAGTATATATTACGATCACAGCACAGCCGGTATA
CGTCATGGCCTAGCCATAATCCTTGTGCCATTGCAAGTCGTCAACAAGAC
CACCAAAATATCTGAACAGAGACACAGCACTCACTCATGAACGCCGCGCA
CTTCATCCAACCGGGCTCCCAGAACCCGTCGGACATCCGGCACCACGGAT
TCGTGGCAGGGTCCGCCCTCCCCATCCCAAACGAGAAGTTCAGCTGTTGG
TCGCCGATGATGGCGTGACTCCAGACAACGGAGATGCCGGCGGTAAAACC
TCGGTTTGCGCCTCCGGACTGCCTGCCGCTGTGAACTGCAGGAGTCGCCG
CGGTCTCCGCGCTGCCGCCGAACATGGGGGAGAAAACCAGCTGCACCTGC
GAGATGCATATCGTCCGTATAGCACAAGATCGGGGGCGGAAAATCCAGCG
ACGCGTGAGAGAGAAGTCGTGGGTTCTATGCTATTTAGTCTGCGACGATG
GGAATGCTGAAACCACGCTTGTCGGTGCAAACACAACCATCAATCATCCT
CGGGCTGAACGGCGAGCACAAAACATCAATGTACACAAGACTCCTACTCG
TGTCACCAGTCGGCATGTACGACGATCCTGGGTAACCAAGGATACATATA
AGTTAGTAGTTGTGGTTCCACCTCCACACGACTACAAGCCCCTTATGTAC
CGCCGTAGGTGACACAAGATACCGCACCCCCTGCTGCTGTGAACAATATC
GATATTTGCCACACAGTAACTGGCCCAACCAAAACGGCGGAATGAACCAT
CTCGTCGAGAGCTCTCCGAAAACGTGGCGTTTCATTTCTGCATGTTCATG
GTCCTGGACTGAGGTTAGCTTTTTATAATCGGCCCAGGGGTTGTGGCATA
TTGTGCCACGTACGGAAGGTGGTGCGTCTATATTATAGACCGACCGGATG
GTGGGAAACTCACGATTCGAGGACTTCGGCGGCAAAATTTCAGTCAACAC
CACAAAAAAATGCACCCGCATCTACGCAAGAAACACAAAAGCACAAGCTT
AGATTATAACGAGACGTGCGTATGTATGTGTTTTGCAACACTCTCTCTGA
CAGGGACACAAAAATTCAACTCACATGTTCCGCCATGTGCTCTTGCAGGA
GGTATATGAAGACGCGTGGGGCCGCGTCTGGGCCCAAACACCCATGACGC
TAGCCATGGCGTTTTCAGGCTTCATGGATGACGACACCGTGAAAGCTGTG
CCGTCGCCGTGGCTGACACCTCCAAAGCTGGAGGCAGCGGCAGGGCGCGC
GGACGAAGAAATGTCGCCGAACTCCGCCGACACCCTTCGAGTGGAGGAGG
CACGCGGCGCCGTCACGCCAGGCGACGCCGTGGCCGCGGCACCGCTGGCG
GCGCCGCCACCGTCGTCCATACTGGAAAATCCTGGCAGTGATGGCCGGCG
GCTCGACGGCTGCGAAGATGCCGACCCAGGAGCCGTTTCGGCAGCCTTAG
CGCTCCTGACGGACGAGAGATCCGCCTCTTGCTCTTCCTCCTCGGGCTCC
TCCTCCTGCAAAGGACGACGGACAAGGGACCACGACGCAAAGAGAGCAAG
ATGAATAAAATATTTGTTGTTGAGCCCCCCGCGATGTAGGGGTCACGGTA
TCTCGTGCCACCCACTACGGTACTGGTCACGGTATTGGTAGTGTAATGCA
TACGAGTAAAGTATGTAGCGCACACACACCGACGACCCTCCGTGTACACG
ATCGAAACACAGCGCAGATACATGAGGCTACACAGGTGGAGTTCGACTCC
CCTTCCCCAAAATGTCGGATGCCCGCGCCCCCTTGTGGAGACCTTTGTCA
ACTGAATTTCTGCCCTTTTTGAGGTTCGGGTTGGGTTCAAGTGTCCGACC
TCGACAAAAGTCTTCACAAGGAGGCGCGGATATTGTCTACTGGGGGGAAG
GGGGTCGACCTCCACCCAACGTACCGCAGGGAATTTAGTCGGCTACACCG
CGCGGCACGCTACCTCGCCCTGTGTGGTAATTGGGCCAAGTTGGTCAGGG
CTAGGTTGCGTACGGTCGAGGGGCCAACGGTCAAGACGGTTATGTGCGCA
TTTAAAAACCGAAAAAAACAAAACTTGCCGTTGGTTTTTTGTCAGTACCT
AAACAAGTTTCCCAATCATCCAGTAGACGTGTCCGGCACATGTACCCCTA
TAGACAATAAATTCGTCCCGAGATCTACGCATGAAGCATCCATCGAGGCA
AGAACCGTACAAAACACGAAGAGGTGGGCGTGCGGGCCAAGGAGATAGCC
CTCCAAAACAACCCCCTTTAAAACAACCCTCGATTTGATCAAATTTACAT
GAAAAACGCACGTGGAATATTTTGCTGTCGGCAGCCGCCTTCCCGACAGC
GGGCTTTCGGCGCAGGCGACGACGGCGGCGTTCACTGCGATGACCCAGGA
TGTCATCGTCGAACTCGTCCAAAGGACCAAGGTAACGCTCAGCCTCCCTG
AGAGCCGCTGCAGAGTAGGTTTGGCCGTTGTCAGTCGAACTCACATTCAT
CTCATCACGCTGCTGCTGA back to topCoding sequence (CDS) from alignment at chr_00:450100..454368- >Ec-00_000280.1 ID=Ec-00_000280.1|Name=Ec-00_000280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=966bp|location=Sequence derived from alignment at chr_00:450100..454368- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGTTTTATCTGGGTGGTCTCAACGTTGCCTACACGCCGGACCTACGTTG CACTCACTCTTTCTGGAACACGGTATTGGACGACCCGCCCTTCTCGAGCA CGGCCCAGCGTCTGACCCGCTTGATGGCCATGGCCATGTTGTCCAACTCC TCGTCGTCGATGATCACCTTCATCAGCCCAATGGCCACCTCCACCATTGG CAGGGCTACCTGTGCGTGTGTTGCCATGACAACAAGGAAGCCAAACGACC CCACAACAGGAGTCGCCGCGGTCTCCGCGCTGCCGCCGAACATGGGGGAG AAAACCAGCTGCACCTGCGAGATGCATATCGTCCGTATAGCACAAGATCG GGGGCGGAAAATCCAGCGACGCGTGAGAGAGAAGTCGTGGGTTCTATGCT ATTTAGTCTGCGACGATGGGAATGCTGAAACCACGCTTGTCGGTGCAAAC ACAACCATCAATCATCCTCGGGCTGAACGGCGAGCACAAAACATCAATGT ACACAAGACTCCTACTCGTGTCACCAGTCGGCATGAGGTATATGAAGACG CGTGGGGCCGCGTCTGGGCCCAAACACCCATGACGCTAGCCATGGCGTTT TCAGGCTTCATGGATGACGACACCGTGAAAGCTGTGCCGTCGCCGTGGCT GACACCTCCAAAGCTGGAGGCAGCGGCAGGGCGCGCGGACGAAGAAATGT CGCCGAACTCCGCCGACACCCTTCGAGTGGAGGAGGCACGCGGCGCCGTC ACGCCAGGCGACGCCGTGGCCGCGGCACCGCTGGCGGCGCCGCCACCGTC GTCCATACTGGAAAATCCTGGCAGTGATGGCCGGCGGCTCGACGGCTGCG AAGATGCCGACCCAGGAGCCGTTTCGGCAGCCTTAGCGCTCCTGACGGAC GAGAGATCCGCCTCTTGCTCTTCCTCCTCGGGCTCCTCCTCATTCATCTC ATCACGCTGCTGCTGA back to top
Synonyms
The feature 'Ec-00_000280.1' has the following synonyms
Synonym |
Esi069_0003 |
Esi_069_0003 |
|