Ec-00_000240.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_000240.1
Unique Name	Ec-00_000240.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	462

Homology

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BLAST of Ec-00_000240.1 vs. uniprot
Match: D7FHA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA5_ECTSI)

HSP 1 Score: 606 bits (1562), Expect = 5.960e-209
Identity = 341/343 (99.42%), Postives = 341/343 (99.42%), Query Frame = 2

Query:  971 METSPLSPGRQGRSSTYGERSDSRSXXXXXXXXXXSRSRDGDRGRHRSGSYGXXXXXXXXXXXXXHGSRPRDGGGRSKGVSRRYSRSRSRSNRRHYAGRHEDDERRYQGRYEYFRYSRSRSGSPHSRLNGSSRDSRHRPHHRQRSDSRPRYCRHPSSYGHYGHNEWYSRECSPSRQRRSLKDTPRDTRRRHRSSDRDGGGGACGYPALSPSGDSGQHSPRRGRSRSESRLKDMGSSTGSGARQQSTDAATGPKGDVFEGDEPLAKLRAAKLEFEMSRTVGGLRRVVRADRECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYDNDYPIKAARKG 1999
            METSPLSPGRQGRSSTYGERSDSRS XXXXXXXX SRSRDGDRGRHRSGSYGXXXXXXXXXXXXXHGSRPRDGGGRSKGVSRRYSRSRSRSNRRHYAGRHEDDERRYQGRYEYFRYSRSRSGSPHSRLNGSSRDSRHRPHHRQRSDSRPRYCRHPSSYGHYGHNEWYSRECSPSRQRRSLKDTPRDTRRRHRSSDRDGGGGACGYPALSPSGDSGQHSPRRGRSRSESRLKDMGSSTGSGARQQSTDAATGPKGDVFEGDEPLAKLRAAKLEFEMSRTVGGLRRVVRADRECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYDNDYPIKAARKG
Sbjct:    1 METSPLSPGRQGRSSTYGERSDSRSGXXXXXXXXRSRSRDGDRGRHRSGSYGXXXXXXXXXXXXXHGSRPRDGGGRSKGVSRRYSRSRSRSNRRHYAGRHEDDERRYQGRYEYFRYSRSRSGSPHSRLNGSSRDSRHRPHHRQRSDSRPRYCRHPSSYGHYGHNEWYSRECSPSRQRRSLKDTPRDTRRRHRSSDRDGGGGACGYPALSPSGDSGQHSPRRGRSRSESRLKDMGSSTGSGARQQSTDAATGPKGDVFEGDEPLAKLRAAKLEFEMSRTVGGLRRVVRADRECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYDNDYPIKAARKG 343

[Close]

BLAST of Ec-00_000240.1 vs. uniprot
Match: D7G2S6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S6_ECTSI)

HSP 1 Score: 604 bits (1558), Expect = 1.950e-205
Identity = 372/450 (82.67%), Postives = 377/450 (83.78%), Query Frame = 2

Query:  650 KETEGEKDAREKAMEVLLAEKDKKWDALYNSRTKKQSRQGERADVRKANDDALQAELAKHLPSNTPNTGVPSTAVPGDGTKLRPAHGLDQHDGGVNSQSATLGPNGAMETSPLSPGRQGRSSTYGERSDSRSXXXXXXXXXXSRSRDGDRGRHRSGSYGXXXXXXXXXXXXXHGSRPRDGGGRSKGVSRRYSRSRSRSNRRHYAGRHEDDERRYQGRYEYFRYSRSRSGSPHSRLNGSSRDSRHRPHHRQRSDSRPRYCRHPSSYGHYGHNEWYSRECSPSRQRRSLKDTPRDTRRRHRSSDRDGGGGACGYPALSPSGDSGQHSPRRGRSRSESRLKDMGSSTGSGARQQSTDAATGPKGDVFEGDEPLAKLRAAKLEFEMSRTVGGLRRVVRADRECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYDNDYPIKAARKG 1999
            KETE EKDAREKAMEVLLAEKDKKWDALYNSRTKKQSRQGERADVRKANDDALQAELAKHLPS TPNTG PSTAVPGDGTK+RPAHGLDQH+GGVNSQSATLGPNGA ET PLSPGRQGRSSTY ERSDSRSXXXXXXXXXX  S DGDRGRHRS    XXXXXXXXXXXXXHGSRPRDGGGR KGVSRRYSRSRSRSN                   EY RYSRSRSGS HSR+NGS RDSRHRPHHRQ                               RQRRSLKDTPRDTR RHRSSDRDGGGGA GYPA SPSGDS QHSPR+GRSRSESRLKDMGSSTGSGARQQSTDAAT PKGDVFEGDEPLAKLRAAKLEFEMSRTVGGLRRVVRA RECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYDND+PIKAARKG
Sbjct:   82 KETEAEKDAREKAMEVLLAEKDKKWDALYNSRTKKQSRQGERADVRKANDDALQAELAKHLPSKTPNTGGPSTAVPGDGTKMRPAHGLDQHEGGVNSQSATLGPNGATETPPLSPGRQGRSSTYRERSDSRSXXXXXXXXXXXXSPDGDRGRHRSXXXXXXXXXXXXXXXXXHGSRPRDGGGRRKGVSRRYSRSRSRSNXXXXXXXXXXXXXXXXXXXEYSRYSRSRSGSRHSRINGSRRDSRHRPHHRQXXXXXXXXX---XXXXXXXXXXXXXXXXXXXRQRRSLKDTPRDTRGRHRSSDRDGGGGAGGYPARSPSGDSRQHSPRQGRSRSESRLKDMGSSTGSGARQQSTDAATDPKGDVFEGDEPLAKLRAAKLEFEMSRTVGGLRRVVRAYRECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYDNDHPIKAARKG 528

The following BLAST results are available for this feature:

BLAST of Ec-00_000240.1 vs. uniprot

BLAST of Ec-00_000240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FHA5_ECTSI	5.960e-209	99.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G2S6_ECTSI	1.950e-205	82.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:398572..402111 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	2727
Hectar predicted targeting category	other localisation
Gene id	Ec-00_000240.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_000240	Ec-00_000240	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 398572..402111 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000240.1	Ec-00_000240.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 399189..401387 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000240.1.1	Ec-00_000240.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 398572..399383 +
Ec-00_000240.1.2	Ec-00_000240.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 399668..400604 +
Ec-00_000240.1.3	Ec-00_000240.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 400888..401068 +
Ec-00_000240.1.4	Ec-00_000240.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 401315..402111 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000240	5UTR:Ec-00_000240.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 398572..399188 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000240.1	CDS:Ec-00_000240.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 399189..399383 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_000240	3UTR:Ec-00_000240.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 401388..402111 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:398572..402111+
coding sequence from alignment at chr_00:398572..402111+

mRNA sequence

>Ec-00_000240.1 ID=Ec-00_000240.1|Name=Ec-00_000240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=462bp
MGKKGKPVPCAKETEGEKDAREKAMEVLLAEKDKKWDALYNSRTKKQSRQ
GERADVRKANDDALQAELAKHLPSNTPNTGVPSTAVPGDGTKLRPAHGLD
QHDGGVNSQSATLGPNGAMETSPLSPGRQGRSSTYGERSDSRSGRRGGTS
TYRSRSRDGDRGRHRSGSYGRGRYRSPGSSRGRHGSRPRDGGGRSKGVSR
RYSRSRSRSNRRHYAGRHEDDERRYQGRYEYFRYSRSRSGSPHSRLNGSS
RDSRHRPHHRQRSDSRPRYCRHPSSYGHYGHNEWYSRECSPSRQRRSLKD
TPRDTRRRHRSSDRDGGGGACGYPALSPSGDSGQHSPRRGRSRSESRLKD
MGSSTGSGARQQSTDAATGPKGDVFEGDEPLAKLRAAKLEFEMSRTVGGL
RRVVRADRECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYD
NDYPIKAARKG*

spliced messenger RNA

>Ec-00_000240.1 ID=Ec-00_000240.1|Name=Ec-00_000240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2727bp|location=Sequence derived from alignment at chr_00:398572..402111+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCCAGACATGAAGCAATTACAGCCGCCCGGGAGCACCCTCGGGCACGTGC
GTCACTCTAGGGATTACGAGGGCAGCGGGCTAGACGGTGCTAGAGACACG
AAGTCGGTAGAGGAAGAGGAACAGGGGGATGAGGAAGAGGAGGAGGAGGA
GGAGGAGGAAGAGGAAGAGGATGAGGACGACGACTTCTGCAACGAGCTTG
TCGTCGCCAACAGCCGGGGTAGGCCCGGGAGGCCTCCTGTTGGCCGCAAA
CCTGCGGCGAGGACGGCGCAACAGGAGTTAGATACGTTGGGTTGGGACTC
GGACGTTGAGATCATGCAGGAGCGTGCCACAAAGACGAGCCGAGCGGGCA
GACCGCTAAAACCCTCTGCCCGTTCGTCGTCCGTCGAGTCGGTGGAGGTG
TCGGACGCCACAGGCAAGCTGGCAGGAAGGCGGCGTGCGAAGAGCAAGCC
CGCAACGGTGAGGGGCCCACCCGCCTCGGCGAAGAAGAATGGCGGCGGTG
CGCCTGGTAAGAGTAAGGCCGCTTCATCGAAGTCGCCTGCTTCGGTGAAG
GTAAACCGGGCGGGGGACGCCTGTTACGCGGAAGGCCGCAGCTGGTTCGA
CTTCGGCTGCGAAAGGCATGGGCAAAAAGGGCAAGCCAGTTCCTTGTGCG
AAGGAAACTGAGGGTGAGAAGGATGCCAGGGAGAAGGCCATGGAGGTTCT
GTTGGCCGAGAAAGACAAGAAGTGGGACGCACTCTACAATAGTCGGACGA
AGAAGCAGAGCAGGCAAGGCGAGCGTGCGGACGTGAGGAAGGCAAACGAC
GACGCATTGCAGGCCGAACTAGCGAAGCACCTTCCCTCTAATACGCCCAA
TACTGGAGTGCCGAGTACTGCTGTGCCGGGTGACGGCACGAAATTGCGGC
CCGCGCACGGGTTAGACCAGCATGATGGGGGCGTCAACAGCCAATCGGCC
ACACTCGGGCCTAACGGCGCCATGGAGACTTCCCCTCTCTCTCCAGGGCG
GCAGGGACGATCGTCTACCTACGGGGAGAGGTCGGACAGTCGCTCCGGAA
GGCGGGGAGGCACGAGCACATACCGGTCGCGGTCACGCGACGGCGACCGT
GGACGCCACCGTAGCGGGAGCTACGGGAGGGGCCGTTACCGTAGCCCAGG
CTCGAGCAGGGGCCGTCACGGCAGTCGGCCGAGGGACGGCGGCGGCCGGA
GCAAGGGGGTTTCCAGGCGCTACTCACGGTCGCGTTCTCGATCGAACCGT
AGGCACTATGCCGGTCGCCACGAAGACGACGAAAGGCGCTATCAGGGAAG
GTACGAATATTTCCGGTACTCCCGTTCGCGCTCAGGATCACCCCACTCAC
GGCTCAACGGAAGCAGCAGGGACAGTCGTCATCGGCCGCACCACCGCCAA
CGCTCTGACAGTCGCCCGCGCTACTGCCGCCATCCGTCCTCCTACGGTCA
CTACGGTCACAACGAGTGGTACAGTAGGGAGTGCTCGCCAAGCCGACAGC
GCCGCAGCCTGAAGGACACTCCCAGAGACACCCGCAGACGTCACAGGAGT
AGCGATCGCGACGGCGGCGGTGGCGCGTGTGGGTATCCTGCCCTGTCGCC
CTCGGGAGATAGCGGTCAGCACAGCCCACGACGGGGACGATCCCGGTCGG
AATCCCGCCTGAAGGACATGGGCAGCTCAACGGGCAGTGGGGCTAGGCAG
CAATCCACGGACGCTGCGACGGGCCCCAAGGGCGATGTCTTCGAGGGTGA
CGAGCCCTTGGCAAAGCTTCGGGCGGCGAAGCTTGAGTTCGAGATGAGCC
GGACTGTGGGAGGACTGCGCCGGGTTGTCAGGGCGGACCGCGAATGCAGC
AGAACCCGCACCGGCAAGAAGCTGCATGACCGGCTCAAGTATCTCAATGC
TGCAGGCATTGCGTACACGACGATGACAAGGTGGTTGAAAGAGTTCGCCG
CGTTCGAGGGTTACGACAACGACTATCCCATCAAAGCCGCTAGGAAGGGT
TAGCCACACATTTAGTAGAGCTAATGTACAAGGGCTATGACACCCTTGCC
GTGGAAGTGCTGGGACGGTCGAGGTGTTCTCCGTGCCTCTGGCAGACTCT
CGTCTCCTTGTGGCGTTTCTAGTGTGGCCGTATTTATCTCTTGGCAGTTC
TTCGCTACGCAAATGTGTTTTGGATGCTACACAGGTTTGTTTGTGACTCG
TAATACCCGTGGACGGACGTCAATAAGAGGCGCATCCGACACGACATTGT
TGGGAACGGCCTGGCGCGCAGGAAGTGTTGAGTTTGCTGAGTATCCTCGG
CGTTGGGCAATGGGGCGTTCGAAGCGCTTGAGTTTACAGCTTATTAGTCT
CACCCTAAAGTATGGGATAATCAAAGTCGCCTCGTCGTGCGCTAGTTTGG
ATTGCGGTAAATCAGTGAGTTCGTACGTAGGTCTTCTCTATGTTATGTGG
ACTTTTTCTTTTTCCGTACGCTCTCGTGGGGTTAATTCCCCATATTAGAT
TGGCTAGTGGCTGTCGCGTTTGTCTATGTTCCTTTGTGGAGGTTGGACGG
GATCATGAGCGAAATTCGGTTGACCTGTGCGTTTGGTATAATCTCCAGCC
TGCGGGTTTTGGTGGGGAGGGGTTTAGCAGAATCGCATATATTGTTCCAA
GGGTTCTGCCCCCATCTGGAAGCAGGTGTTGGTCGTTGTTCTCGTTTTTT
TGTGTATTTTTTTTGTTTGTCTGTGTN

protein sequence of Ec-00_000240.1

>Ec-00_000240.1 ID=Ec-00_000240.1|Name=Ec-00_000240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=462bp
MGKKGKPVPCAKETEGEKDAREKAMEVLLAEKDKKWDALYNSRTKKQSRQ
GERADVRKANDDALQAELAKHLPSNTPNTGVPSTAVPGDGTKLRPAHGLD
QHDGGVNSQSATLGPNGAMETSPLSPGRQGRSSTYGERSDSRSGRRGGTS
TYRSRSRDGDRGRHRSGSYGRGRYRSPGSSRGRHGSRPRDGGGRSKGVSR
RYSRSRSRSNRRHYAGRHEDDERRYQGRYEYFRYSRSRSGSPHSRLNGSS
RDSRHRPHHRQRSDSRPRYCRHPSSYGHYGHNEWYSRECSPSRQRRSLKD
TPRDTRRRHRSSDRDGGGGACGYPALSPSGDSGQHSPRRGRSRSESRLKD
MGSSTGSGARQQSTDAATGPKGDVFEGDEPLAKLRAAKLEFEMSRTVGGL
RRVVRADRECSRTRTGKKLHDRLKYLNAAGIAYTTMTRWLKEFAAFEGYD
NDYPIKAARKG*

mRNA from alignment at chr_00:398572..402111+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_000240.1 ID=Ec-00_000240.1|Name=Ec-00_000240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3540bp|location=Sequence derived from alignment at chr_00:398572..402111+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCCAGACATGAAGCAATTACAGCCGCCCGGGAGCACCCTCGGGCACGTGC
GTCACTCTAGGGATTACGAGGGCAGCGGGCTAGACGGTGCTAGAGACACG
AAGTCGGTAGAGGAAGAGGAACAGGGGGATGAGGAAGAGGAGGAGGAGGA
GGAGGAGGAAGAGGAAGAGGATGAGGACGACGACTTCTGCAACGAGCTTG
TCGTCGCCAACAGCCGGGGTAGGCCCGGGAGGCCTCCTGTTGGCCGCAAA
CCTGCGGCGAGGACGGCGCAACAGGAGTTAGATACGTTGGGTTGGGACTC
GGACGTTGAGATCATGCAGGAGCGTGCCACAAAGACGAGCCGAGCGGGCA
GACCGCTAAAACCCTCTGCCCGTTCGTCGTCCGTCGAGTCGGTGGAGGTG
TCGGACGCCACAGGCAAGCTGGCAGGAAGGCGGCGTGCGAAGAGCAAGCC
CGCAACGGTGAGGGGCCCACCCGCCTCGGCGAAGAAGAATGGCGGCGGTG
CGCCTGGTAAGAGTAAGGCCGCTTCATCGAAGTCGCCTGCTTCGGTGAAG
GTAAACCGGGCGGGGGACGCCTGTTACGCGGAAGGCCGCAGCTGGTTCGA
CTTCGGCTGCGAAAGGCATGGGCAAAAAGGGCAAGCCAGTTCCTTGTGCG
AAGGAAACTGAGGGTGAGAAGGATGCCAGGGAGAAGGCCATGGAGGTTCT
GTTGGCCGAGAAAGACAAGAAGTGGGACGCACTCTACAATAGTCGGACGA
AGAAGCAGAGCAGGCAAGGCGAGCGTGCGGACGTGAGGAAGGCAAACGAC
GACGCATTGCAGGTGATGATATGGTTCGCTCAAGAAGTCTGGTGGTTCGG
TTGCCTGCTTCATAAGTGATTCCCGTCTGCGGCCCTGCCTCCTAAGGGTG
ACATGTCATGCCAAACCGCCTGCTCAAGTTTAAGTCCATAACGTTGAGTA
GTACACCATCCCTTACGGTGGGCCTGCCTGTCTATCTCTGCCGTTTAGTC
TGTACATGCTTCCCAACTAAACGAGGACGTCGAATTGTTTTCGTCTGATC
CTGTGCTCTATTTTTACGCCCCTACCTTCCAATTTCCATCCACCAGGCCG
AACTAGCGAAGCACCTTCCCTCTAATACGCCCAATACTGGAGTGCCGAGT
ACTGCTGTGCCGGGTGACGGCACGAAATTGCGGCCCGCGCACGGGTTAGA
CCAGCATGATGGGGGCGTCAACAGCCAATCGGCCACACTCGGGCCTAACG
GCGCCATGGAGACTTCCCCTCTCTCTCCAGGGCGGCAGGGACGATCGTCT
ACCTACGGGGAGAGGTCGGACAGTCGCTCCGGAAGGCGGGGAGGCACGAG
CACATACCGGTCGCGGTCACGCGACGGCGACCGTGGACGCCACCGTAGCG
GGAGCTACGGGAGGGGCCGTTACCGTAGCCCAGGCTCGAGCAGGGGCCGT
CACGGCAGTCGGCCGAGGGACGGCGGCGGCCGGAGCAAGGGGGTTTCCAG
GCGCTACTCACGGTCGCGTTCTCGATCGAACCGTAGGCACTATGCCGGTC
GCCACGAAGACGACGAAAGGCGCTATCAGGGAAGGTACGAATATTTCCGG
TACTCCCGTTCGCGCTCAGGATCACCCCACTCACGGCTCAACGGAAGCAG
CAGGGACAGTCGTCATCGGCCGCACCACCGCCAACGCTCTGACAGTCGCC
CGCGCTACTGCCGCCATCCGTCCTCCTACGGTCACTACGGTCACAACGAG
TGGTACAGTAGGGAGTGCTCGCCAAGCCGACAGCGCCGCAGCCTGAAGGA
CACTCCCAGAGACACCCGCAGACGTCACAGGAGTAGCGATCGCGACGGCG
GCGGTGGCGCGTGTGGGTATCCTGCCCTGTCGCCCTCGGGAGATAGCGGT
CAGCACAGCCCACGACGGGGACGATCCCGGTCGGAATCCCGCCTGAAGGA
CATGGGCAGCTCAACGGGCAGTGGGGCTAGGCAGCAATCCACGGACGCTG
CGACGGGCCCCAAGGGCGATGTCTTCGAGGGTGGTGAGTACACGAGTTAC
CGTAGTCTGTTTGTCGGATGTTGACGATGGGTTTTCGTTTCAGTTTTCTG
CGTGTCTTCGATCTGCGGTCTTCACGCCCCTACGGATTTCCTCGAAATAT
CAACGTCGTAGTTTGCCGCGGCTCTGTGTTGTAGGTTGTCGTTGATGCCG
ACCCTGACGACCCACTTCTGCGGACCTTTCTGTTTATTGAAGCTCACCAA
TCCACACCTTGTTAGATGCCTAATTTGTCAAACGATAATGCTCACCCCAA
CGGCTTGGTTCCGCAGACGAGCCCTTGGCAAAGCTTCGGGCGGCGAAGCT
TGAGTTCGAGATGAGCCGGACTGTGGGAGGACTGCGCCGGGTTGTCAGGG
CGGACCGCGAATGCAGCAGAACCCGCACCGGCAAGAAGCTGCATGACCGG
CTCAAGTATCTCAATGCTGCAGGCATTGCGTACACGACGATGACAAGGTG
CAATGGTTGCCATGTTTCCTGTATTCGTTCAGCGTTTTGGTTGAACACGT
TATGTATCTTGACTGCTGAGTGTTCGGTTGCGTCGCTTCGAACATACGCA
GGTGTAGCAATGTAACAACCATCGACGGCGTGGTGGTGTAGTTTTACTTC
CGCCCTGTTGTCGTATTTTAAACTTGTACTCGACCACCTTAAACATGTCA
TGGGTTACGCGCTTACGCCCATTTCGGCCCGCAATGTGTACAGGTGGTTG
AAAGAGTTCGCCGCGTTCGAGGGTTACGACAACGACTATCCCATCAAAGC
CGCTAGGAAGGGTTAGCCACACATTTAGTAGAGCTAATGTACAAGGGCTA
TGACACCCTTGCCGTGGAAGTGCTGGGACGGTCGAGGTGTTCTCCGTGCC
TCTGGCAGACTCTCGTCTCCTTGTGGCGTTTCTAGTGTGGCCGTATTTAT
CTCTTGGCAGTTCTTCGCTACGCAAATGTGTTTTGGATGCTACACAGGTT
TGTTTGTGACTCGTAATACCCGTGGACGGACGTCAATAAGAGGCGCATCC
GACACGACATTGTTGGGAACGGCCTGGCGCGCAGGAAGTGTTGAGTTTGC
TGAGTATCCTCGGCGTTGGGCAATGGGGCGTTCGAAGCGCTTGAGTTTAC
AGCTTATTAGTCTCACCCTAAAGTATGGGATAATCAAAGTCGCCTCGTCG
TGCGCTAGTTTGGATTGCGGTAAATCAGTGAGTTCGTACGTAGGTCTTCT
CTATGTTATGTGGACTTTTTCTTTTTCCGTACGCTCTCGTGGGGTTAATT
CCCCATATTAGATTGGCTAGTGGCTGTCGCGTTTGTCTATGTTCCTTTGT
GGAGGTTGGACGGGATCATGAGCGAAATTCGGTTGACCTGTGCGTTTGGT
ATAATCTCCAGCCTGCGGGTTTTGGTGGGGAGGGGTTTAGCAGAATCGCA
TATATTGTTCCAAGGGTTCTGCCCCCATCTGGAAGCAGGTGTTGGTCGTT
GTTCTCGTTTTTTTGTGTATTTTTTTTGTTTGTCTGTGTN

Coding sequence (CDS) from alignment at chr_00:398572..402111+

>Ec-00_000240.1 ID=Ec-00_000240.1|Name=Ec-00_000240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1386bp|location=Sequence derived from alignment at chr_00:398572..402111+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGCAAAAAGGGCAAGCCAGTTCCTTGTGCGAAGGAAACTGAGGGTGA
GAAGGATGCCAGGGAGAAGGCCATGGAGGTTCTGTTGGCCGAGAAAGACA
AGAAGTGGGACGCACTCTACAATAGTCGGACGAAGAAGCAGAGCAGGCAA
GGCGAGCGTGCGGACGTGAGGAAGGCAAACGACGACGCATTGCAGGCCGA
ACTAGCGAAGCACCTTCCCTCTAATACGCCCAATACTGGAGTGCCGAGTA
CTGCTGTGCCGGGTGACGGCACGAAATTGCGGCCCGCGCACGGGTTAGAC
CAGCATGATGGGGGCGTCAACAGCCAATCGGCCACACTCGGGCCTAACGG
CGCCATGGAGACTTCCCCTCTCTCTCCAGGGCGGCAGGGACGATCGTCTA
CCTACGGGGAGAGGTCGGACAGTCGCTCCGGAAGGCGGGGAGGCACGAGC
ACATACCGGTCGCGGTCACGCGACGGCGACCGTGGACGCCACCGTAGCGG
GAGCTACGGGAGGGGCCGTTACCGTAGCCCAGGCTCGAGCAGGGGCCGTC
ACGGCAGTCGGCCGAGGGACGGCGGCGGCCGGAGCAAGGGGGTTTCCAGG
CGCTACTCACGGTCGCGTTCTCGATCGAACCGTAGGCACTATGCCGGTCG
CCACGAAGACGACGAAAGGCGCTATCAGGGAAGGTACGAATATTTCCGGT
ACTCCCGTTCGCGCTCAGGATCACCCCACTCACGGCTCAACGGAAGCAGC
AGGGACAGTCGTCATCGGCCGCACCACCGCCAACGCTCTGACAGTCGCCC
GCGCTACTGCCGCCATCCGTCCTCCTACGGTCACTACGGTCACAACGAGT
GGTACAGTAGGGAGTGCTCGCCAAGCCGACAGCGCCGCAGCCTGAAGGAC
ACTCCCAGAGACACCCGCAGACGTCACAGGAGTAGCGATCGCGACGGCGG
CGGTGGCGCGTGTGGGTATCCTGCCCTGTCGCCCTCGGGAGATAGCGGTC
AGCACAGCCCACGACGGGGACGATCCCGGTCGGAATCCCGCCTGAAGGAC
ATGGGCAGCTCAACGGGCAGTGGGGCTAGGCAGCAATCCACGGACGCTGC
GACGGGCCCCAAGGGCGATGTCTTCGAGGGTGACGAGCCCTTGGCAAAGC
TTCGGGCGGCGAAGCTTGAGTTCGAGATGAGCCGGACTGTGGGAGGACTG
CGCCGGGTTGTCAGGGCGGACCGCGAATGCAGCAGAACCCGCACCGGCAA
GAAGCTGCATGACCGGCTCAAGTATCTCAATGCTGCAGGCATTGCGTACA
CGACGATGACAAGGTGGTTGAAAGAGTTCGCCGCGTTCGAGGGTTACGAC
AACGACTATCCCATCAAAGCCGCTAGGAAGGGTTAG

Synonyms

The feature 'Ec-00_000240.1' has the following synonyms


Synonym
Esi1060_0003
Esi_1060_0003