Ec-00_000210.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_000210.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI) HSP 1 Score: 656 bits (1693), Expect = 5.100e-234 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1 Query: 1 MSTESFQEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 1005 MSTESFQEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL Sbjct: 1 MSTESFQEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 335
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE) HSP 1 Score: 561 bits (1446), Expect = 1.160e-192 Identity = 302/358 (84.36%), Postives = 305/358 (85.20%), Query Frame = 1 Query: 1 MSTESFQEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAG-----------------------GGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 1005 MSTESF EMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERA AETE EGSRQD S+ + RDGARW G GGGEP SAEVHGFNAKMAE FDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLK+INRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL Sbjct: 236 MSTESFHEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAPAETETEGSRQDMKVENSDEMTSVVVMPV----------RDGARWPGXXXXXXXXXXXXXXXXXXXXXXXGGGEPSSAEVHGFNAKMAEVFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 583
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA) HSP 1 Score: 303 bits (777), Expect = 4.580e-93 Identity = 179/339 (52.80%), Postives = 220/339 (64.90%), Query Frame = 1 Query: 25 MKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEP----------PSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHA--PTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 1005 ++Y+AP++RV SAVAPPSSVARPNYHDA+RRVAVVV+QH++ C+ R++A + A P +R AP A GGG+P P A F+ A+ F E+ +VSP R F+ A ALP F + +V + P AP+V+ IYEFI+TLFN+A LSSECSLVCLIY+ERLME A VPLL TWKPV+LCGLLLASKVWQDLSSWNVEFSTVYPE+SL++INRLE ++L ++WD+ IS+SLYAKYYFALRSL E DFRRRYN V+QIDAPRA V R+ V+ E M SKSL Sbjct: 214 VQYRAPEKRVPSAVAPPSSVARPNYHDAIRRVAVVVFQHVQNCE--RRLARVKRAAEHPPRPPPTR----------APPHAPF--------------------GGGQPGGVSAPLPVTPGAVREAFDPAKADLFHERHYVSPRYRCTFVRALGAAGALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCVVQIDAPRADRVQERSLAVREEAAK------MFSKSL 514
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A1V9ZAD2_9STRA (Cyclin-Y-like protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZAD2_9STRA) HSP 1 Score: 270 bits (690), Expect = 3.020e-82 Identity = 151/316 (47.78%), Postives = 207/316 (65.51%), Query Frame = 1 Query: 25 MKYKAPDRRV--FSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSL-AALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 963 +KY+APD RV +APPSSVA+PNY D+LRRV+VV+YQHI+ C+ + RE A T + S S PS+ A++ R++ + PP+ + G + + FDE+ FVSP +Y F+ PT+ P + + +V P+V+EI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL +WKP++LCGLLL+SKVWQDLSSWNVE S +YP++ L INRLE LFL ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN ++ID P ++ + R+ VK E+ Sbjct: 47 LKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRL-----RETAHLATSSQVSYGATTLS---GEPSVEASMSRSDHRT--------ESFDSSTVHPPNGILSGLQLSLDKVFDEEHFVSPQYKYTFVRLPTLH-PLTYYRMDKVNCKTHIPSVEEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLSSKVWQDLSSWNVEISNIYPQFPLHCINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 345
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A6G0WM95_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM95_9STRA) HSP 1 Score: 270 bits (689), Expect = 4.250e-82 Identity = 155/321 (48.29%), Postives = 205/321 (63.86%), Query Frame = 1 Query: 25 MKYKAPDRRV--FSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEA------FDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 963 +KY+APD RV A+ PPSSVA+PNY D+LRRV+VV+YQHI+ C E+R R + T +G N P+ A+ + S + E + + S +HG A FDE+ FVSP +Y F+ P M P + + +V P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL +WKP++LCGLLLASKVWQDLSSWNVE S VYP++ L +INRLE LFL ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN ++ID P ++ + R+ VK E+ Sbjct: 47 LKYRAPDARVDVSEALPPPSSVAKPNYDDSLRRVSVVLYQHIRRC-------EKRMRDSKSTAFQGLFSSN--------PANASGEVSSSTINDEDPDNSVSF------DASTVLHGHTLLSGLALSPDKVFDEEHFVSPQYKYQFIRVP-MLHPLTFYKMDKVTCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 345
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A1V9Y8F2_9STRA (Cyclin-Y n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8F2_9STRA) HSP 1 Score: 266 bits (681), Expect = 6.370e-81 Identity = 150/323 (46.44%), Postives = 204/323 (63.16%), Query Frame = 1 Query: 25 MKYKAPDRRV--FSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAA--------ETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 963 +KY+AP+ RV +APPSSVA+PNY D+LRRV+VV+YQHI+ C+ K E+E A+ PE + ++ + S A SA+ G G + G + + FDE+ FVSP +Y F+ TM P + + +V P+V+EI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL +WKP++LCGLLL+SKVWQDLSSWNVE S +YP++ L INRLE LFL ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN ++ID P ++ + R+ VK E+ Sbjct: 47 LKYRAPEARVDLSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCE---KRIREKEAMASMIVSYEATTLPPESIPEQSLSRSEQRTESFDA-----SAMHGANGI----------------LSGLQLSIEKVFDEEHFVSPQYKYTFVRLSTMH-PLTYYRMEKVNCKTHIPSVEEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLSSKVWQDLSSWNVEISNIYPQFPLHCINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 344
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A024TK22_9STRA (Cyclin N-terminal domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TK22_9STRA) HSP 1 Score: 263 bits (671), Expect = 3.570e-79 Identity = 155/324 (47.84%), Postives = 202/324 (62.35%), Query Frame = 1 Query: 25 MKYKAPDRRV--FSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPP---SAEVHG------FNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 963 +KY+APD RV + PPSSVA+PNY D+LRRV+VV+YQHI+ C+ K E A P G S A S A+ + G+G D EPP S ++G FDE+ FV+P Y F+ P M P + + +V P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL +WKP++LCGLLLASKVWQDLSSWNVE S V+P++ L +INRLE LFL ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN ++ID P ++ + R+ VK E+ Sbjct: 48 LKYRAPDARVDVSETLPPPSSVAKPNYDDSLRRVSVVLYQHIRRCE---KRLRESRGGGAGIVPPGGFHGLFHSTSAPAASTNAVA-DSIVQGGDGSADDNDPVHD--EPPFDSSTVLNGQTVLSNLGVSRDRVFDEEHFVTPQYTYQFVRLP-MLHPLTYYKMDKVSCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERASIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVFPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 364
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A5D6XKS8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKS8_9STRA) HSP 1 Score: 261 bits (668), Expect = 1.300e-78 Identity = 153/333 (45.95%), Postives = 207/333 (62.16%), Query Frame = 1 Query: 25 MKYKAPDRRVFSAVAPPS---SVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHG-----------------FNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 963 ++Y+ PD RV S +APPS SVA+PNY D LRRV+VV+YQH++ C+ ++ +EE + + G R ++P L+A+ E GEP + E+ + E F E+ FV+P +Y F+ P + P F + +V S P+VDEI+ F K LFNKAQLS+EC++VCLIY+ERLME A VPLL TWKP++LCGLLLASKVWQDLSSWNVE S +YP+Y L +INRLE LFL ++WD+ IS+S+YAKYYFALRSLTEK+DFRRRYN +++D P +R + R+ V+ E+ Sbjct: 70 LRYRKPDDRVTS-LAPPSAVSSVAQPNYDDFLRRVSVVLYQHLRRCE--KRHSEELRGPSVVSSTVGVD-------RGTSPFLSAVVSRE------------------GEPDALELPSAPLAPSTGPSSTTSPRLLELPVDEIFREEHFVTPQYKYTFVRLPRV-FPMTSFVMEKVSSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAVTWKPIVLCGLLLASKVWQDLSSWNVEISNIYPQYPLHSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSRRLEERSAAVRHEL 373
BLAST of Ec-00_000210.1 vs. uniprot
Match: W4G411_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G411_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.650e-78 Identity = 152/318 (47.80%), Postives = 203/318 (63.84%), Query Frame = 1 Query: 25 MKYKAPDRRV--FSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSL---AALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 963 +KY+APD RV +APPSSVA+PNY D+LRRV+VV+YQHI+ C+ ++M E + + G S SAP+ AA +E + D + G + FDE+ FV+P +Y F+ P M P + + +V P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL +WKP++LCGLLLASKVWQDLSSWNVE S VYP++ L +INRLE LFL ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN ++ID P ++ + R+ VK E+ Sbjct: 48 LKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCE--KRMRESKSGGGTLS---GGFHGLFHS--NSAPASSTHAAAVEDEPFPF-----DSSTVLNG-----QTVLSNLGVSRESVFDEEHFVTPQYKYQFVRLP-MLHPLTYYKMDKVSCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERASIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 347
BLAST of Ec-00_000210.1 vs. uniprot
Match: A0A485KW34_9STRA (Aste57867_12616 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW34_9STRA) HSP 1 Score: 258 bits (660), Expect = 9.700e-78 Identity = 148/315 (46.98%), Postives = 199/315 (63.17%), Query Frame = 1 Query: 25 MKYKAPDRRV--FSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 963 +KY+ P RV + PPSSVA+PNY D+LRRV+VV+YQHI+ C+ ++M E + + P R + SA A + D + G + G N + FDE+ FV+P +Y F+ P M P + + +V P+VDEI+ F K LFN+AQLS+EC++VCLIY+ERLME A +PLL +WKP++LCGLLLASKVWQDLSSWNVE S VYP++ L +INRLE LFL ++WD+ IS S+YAKYYFALRSLTEK+DFRRRYN ++ID P ++ + R+ VK E+ Sbjct: 47 LKYREPHARVDVSETLPPPSSVAKPNYDDSLRRVSVVLYQHIRRCE--KRMRESKGASL----PGLFRPLSTSVMTESAMDDPTADNLGMASMPDDSFDSSTVMNG-----QTVLSGLNLSPDKVFDEEHFVTPQYKYQFVRLP-MLHPLTYYKMDKVSCKTHLPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGASWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 349 The following BLAST results are available for this feature:
BLAST of Ec-00_000210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_000210.1 ID=Ec-00_000210.1|Name=Ec-00_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=336bpback to top spliced messenger RNA >Ec-00_000210.1 ID=Ec-00_000210.1|Name=Ec-00_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1707bp|location=Sequence derived from alignment at chr_00:365442..369453- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGTCGACCGAGTCTTTCCAGGAAATGAAGTACAAGGCGCCGGACAGAAGback to top protein sequence of Ec-00_000210.1 >Ec-00_000210.1 ID=Ec-00_000210.1|Name=Ec-00_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=336bp MSTESFQEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTback to top mRNA from alignment at chr_00:365442..369453- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_000210.1 ID=Ec-00_000210.1|Name=Ec-00_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4012bp|location=Sequence derived from alignment at chr_00:365442..369453- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:365442..369453- >Ec-00_000210.1 ID=Ec-00_000210.1|Name=Ec-00_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1008bp|location=Sequence derived from alignment at chr_00:365442..369453- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_000210.1' has the following synonyms
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