mRNA_Ecto-sp6_S_contig97.18729.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: D8LL92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL92_ECTSI) HSP 1 Score: 641 bits (1653), Expect = 3.070e-229 Identity = 327/338 (96.75%), Postives = 328/338 (97.04%), Query Frame = 1
Query: 1 MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGGSERTCRACSRRQAKGQPAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE 1014
MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGG+ERTCRACSRRQAKGQPAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFH LVAE VAVPG GPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE
Sbjct: 1 MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGGAERTCRACSRRQAKGQPAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHVLVAE--------VAVPGSGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE 330
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A6U1NKJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NKJ8_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.250e-41 Identity = 97/265 (36.60%), Postives = 148/265 (55.85%), Query Frame = 1
Query: 226 LPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNA---ELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAA--GSVFLSAYAEERVEGSETDS-MWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFF 1002
LPV S++P+W ++ D D + ++ VPG ++ E G+V+PRSY WVPE SP ++ + ++KDG PRY+MP +D+ K G+ WRNRGLNS+P+A WE A + LS +A VEG E ++ W IAEK+ + D +V+++ADPPEE I SGFH L+ A+ + VP G++ +R F++D +P +L+L MG G + L + + + G+SEFLP+VY P +
Sbjct: 69 LPVGYTSTWPVWALE-DTPSDGSSNCRLSAVPGTSSGEGETGFVDPRSYHLFWVPEDSPPLLLRPAVVAVLKDGKPRYIMPGLDITAEKAGQVWRNRGLNSLPLAGQWESFLDTALDLSKLTLSVFARHPVEGEEGNTNAWTTIAEKVNLLDTLDRLVAIMADPPEE--ISSGFHVLIMPI---ADTTLQVPS----GTN---------NMRAFITDYPDPKRMLELPSMGSDG----SELDIQIEKILSAGKSEFLPQVYAPLY 310
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A6V1VC31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VC31_HETAK) HSP 1 Score: 154 bits (389), Expect = 1.800e-39 Identity = 95/281 (33.81%), Postives = 151/281 (53.74%), Query Frame = 1
Query: 166 ERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIA--EKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFF 1002
E ERQ ISIL + G + LP++ AS +P+W ++ + G V P WV+P S+S+LW+P SP P ++ L +L+KDG PRYV+P +D + +GGR+WRNRG+ + P+AH W+ + +S Y +++ + DS W A E+L A +++++ + P E I +GFHF+ A A +P ++ R+RVFL+D+ +P LL+LE+ G G L +V +A GES+++P+VYR F
Sbjct: 42 EEKKERQSISILGS-GRMETLPLSYAS-YPVWMME-----PEGGLARVPDAPEEEGGAAWVDPFSFSDLWIPMDSPQPMLRPTLMVLLKDGNPRYVLPGLDTFLEQGGRRWRNRGMRTFPMAHVWQLFLAVPPEFLKISVYTNQKIPDTINDS-WEKFADCEELGAVGALDAVLALVGEGPPE--IKNGFHFVAAPLPVPA---APIP-------------QNCQRIRVFLNDIEDPIRLLELED---GAETGGGVLDVEVTEIAPAGESQYIPDVYRQLF 293
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A836CL77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL77_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.870e-34 Identity = 102/310 (32.90%), Postives = 144/310 (46.45%), Query Frame = 1
Query: 220 QRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGP-NAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLV-------------------------------VSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVE-----------------GSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFF 1002
++LP +SFP+W +D D +++VP + WV PRS + LWVPEGS P + + ML+KDG PRY+ P +D V V++GGR WRNRG+ SV +AH+W+ + LSAY V G++TD+ W A+AE + V A ++ V+ADPP EL+ G LVA K A +P DG ++RVFLSD P LL++E RG A L V VA+ +SE+LP++YRP +
Sbjct: 14 EQLPAGLVTSFPIWMLDPDTS-------KLSRVPDQADGSQSWVEPRSCAALWVPEGSTVPTATVGVAMLVKDGRPRYLFPHLDTVXXXXXXXXXXXXPRPSLXXXXXXXXXXXXXVVARGGRAWRNRGVASVALAHSWQQFAHVPVQDLSLSAYVGAPVPQEEGXXXXXXXXXXXXXGAKTDA-WHAVAEGVEVEAAVLQLMGVIADPPAELN--DGISILVAP--VKGAAPFPLP-------------PDGSKIRVFLSDYPAPVRLLEVETT-----RG-AQLEVRVERVASAAKSEYLPDIYRPLY 292
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S0ERZ3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ERZ3_9EUKA) HSP 1 Score: 115 bits (288), Expect = 4.920e-25 Identity = 92/324 (28.40%), Postives = 137/324 (42.28%), Query Frame = 1
Query: 187 FISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNA---ELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSK----GGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAY----------------AEERVEGSETDSMWGAIAEK-------------------------LPVTDAFTDIVSVLADPPEEL-DIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPG 1011
+ I S G +LP+A +PLW D HVT++ G E GWV+P S+ +LW+PE P P+ L + +++KDGVPRY++P ++ ++ G W NRGLNSVP+ W A G L AY A G+ + GA E PV +A I+ VLA+ E+ ++G G+HF+ A GG+ R G ++R+ L+ + + D E G+ + A V S+ GGESEF+PE Y+P + G
Sbjct: 22 MVKISSIKGGSGQLPLAMCR-WPLWIASAD---------HVTKLSGAGGDEEEAGWVDPISFEQLWLPEDLPLPSSHLAVSLVIKDGVPRYLLPCIETSITTVSGVSGTVWHNRGLNSVPLGAQW-----MAWGEAPLKAYRLFSFGSDFKPPAPPPARRHPRGARAAAEEGAAEEADTAEEELPPAWEPLQVMADRPGGGGQPVEEALGSIMRVLAEAGAEIKEMGEGYHFITARVD--------------GGALPADTVRPGRKLRLILATALDDPNPNDEEWEGE--MLSFARCDTTVYSIPAGGESEFMPECYKPLYGAG 314
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S2EFX4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EFX4_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.050e-21 Identity = 77/242 (31.82%), Postives = 116/242 (47.93%), Query Frame = 1
Query: 196 ILSADGTE-QRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAEL---GWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVS-KGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSM---------WGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEA-STKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPAD 876
I A+G + Q + V ASS+P+W++ + Q VT+VP +++ GWV+P S+ +LW+P P P LG+++KDGVPRY P V+ +++ + G W NRGLNS+P+A TW P A + E D W A + V A + + +A+ P EL GF +LV S+ A++A S+V+ G RVR LSD+ D
Sbjct: 64 IKIAEGPKGQTIAVNYASSWPVWYVTHNGQ-------SVTRVPDASSDELGGGWVSPSSFEQLWLPMDLPPPTASAALGLVLKDGVPRYAFPTVETILATRDGGAWHNRGLNSLPLAKTWMPFFNVVNADTLSLACYHRSMPTEENDXXXXXXXXXEEWKAAFPRTDVKGALDLLFNAIANGPNELS--EGFCYLVTPLPSSDAQSAFLTK------SAVI----PGQRVRCLLSDLDTMPD 286
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S4R144_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R144_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.230e-19 Identity = 72/196 (36.73%), Postives = 102/196 (52.04%), Query Frame = 1
Query: 196 ILSADGTE-QRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVP-GPNAELG--WVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVD--LVVSKGGRKWRNRGLNSVPVAHTWEPVERAA-AGSVFLSAY-----AEERVEGSET--DSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLV 741
I A+G + Q + V ASS+P+W++ + Q VT+VP G + ELG WV+P S+ +LW+P P P LG+++KDGVPRY P V+ L GG + NRGLNS+P+A TW A ++ L+ Y EE E E D W A + V A + + +A+ P EL GF FL+
Sbjct: 39 IKIAEGPKGQTIAVKYASSWPVWYVTHNGQ-------SVTRVPDGSSDELGGGWVSPSSFEQLWLPMDLPPPTASAALGLVLKDGVPRYAFPTVETALATRDGGAR-HNRGLNSLPLAKTWLQFFNVVNADTLSLACYHRSMPTEENDEDDEQKQDEEWKAAFPRTDVKGALDLLFNAIANGPNELS--EGFCFLI 224
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A448ZAV6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAV6_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.150e-13 Identity = 72/293 (24.57%), Postives = 127/293 (43.34%), Query Frame = 1
Query: 187 FISILSAD---GTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGS------VFLSAYAEERVEGSETDSMWGAIAEKLP---VTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE*AGPL 1029
F+ I S + G ++ LP + +P WF++ D G Q LG+V P S +++ P P +KL +G+ ++ G+ R+V+P +D+ KG RNRGL SVP+AH W ++ + + LS+ +R + +W ++ LP + A + LA+ + +G G H + I + V+ + VRV + +V + + D+E + L +V+ +G +SE+LPE Y+P + PL
Sbjct: 44 FVEITSLNNFGGRKESLPASFIERWPNWFLEND------GTLLRIQDEETAGGLGYVTPTSIDQIFQPVDLKRPEIKLAVGIHVRSGIIRHVLPALDISYGKGTH--RNRGLCSVPLAHNWVDFGYLSSLADYNRYQLILSSAKRQRSSDXVDNRIWDKLS-SLPGNAIARAIERAIVCLAEEDSDA-LGEGSHIIH---------------IALDDAKVLEMPKPKNDVRVTMVEVGDEGEQ-DIE---------IGILDVAIVTAMSGSDSEYLPEAYKPLYSDASLRNPL 301
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A0M0K6T8_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K6T8_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 2.960e-11 Identity = 62/237 (26.16%), Postives = 98/237 (41.35%), Query Frame = 1
Query: 409 LCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAY--AEERVEGSETDS---------------------------MWGAIAEKLPVTDAFTDIVSVLADPPEELD---IGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRG------VAALGFDVVSVANGGESEFLPEVYRPFFK 1005
+ +G+++++G PRY+ P +D + G++WRNRG+ SVP+A TW + A ++ LS++ A EG T + W + V DA + + L + P+ L +G GF FL+A K G A R GGR+R+ LSD LE+ G G G + +V G +S +LP YR ++
Sbjct: 1 MAIGLVLRNGEPRYIFPTIDTYLDAAGKRWRNRGIFSVPLAKTWLHYGESPADNLRLSSFVIAPTLAEGDATAAPTAXXXXXXXXXXXXSKASGRTWERFGQWEQCMDHQQVLDALDEAFAALDNLPDALSRTSLGQGFCFLIAPLPDK------------GAMLPETALRPGGRLRLLLSD---------LEDWGTDGNDGREPAWQYGDCELSMYTVPPGRDSPYLPTPYRELYE 216
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S0JIP9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JIP9_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 5.250e-11 Identity = 55/167 (32.93%), Postives = 79/167 (47.31%), Query Frame = 1
Query: 406 KLCLGMLMKDGVPRYVMPMVDLVVSKG-GRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEEL---DIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEE 894
++ LGM++++G PRY+ P +D + G WRNRGLN+VP+A TW + A S+ LSAY S D+ I PV A L + P L +G GF FL+ E+ +P A G R+RVFLSD+ + L + E+
Sbjct: 1 RIALGMVLRNGEPRYIFPALDTYIETADGMAWRNRGLNTVPLAKTWLHYGESPADSLRLSAYI-----SSCPDAPAEQIFGHRPVAAALDAACESLENLPPLLKRSSLGDGFCFLLCPLPDLPESEQFLP---------ARALAPGTRLRVFLSDIEKDILLPNTEQ 153 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig97.18729.1 >prot_Ecto-sp6_S_contig97.18729.1 ID=prot_Ecto-sp6_S_contig97.18729.1|Name=mRNA_Ecto-sp6_S_contig97.18729.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=339bp MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGGSERTCRACSRRQAKGQback to top mRNA from alignment at Ecto-sp6_S_contig97:507442..511102- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig97.18729.1 ID=mRNA_Ecto-sp6_S_contig97.18729.1|Name=mRNA_Ecto-sp6_S_contig97.18729.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3661bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:507442..511102- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig97:507442..511102- >mRNA_Ecto-sp6_S_contig97.18729.1 ID=mRNA_Ecto-sp6_S_contig97.18729.1|Name=mRNA_Ecto-sp6_S_contig97.18729.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1017bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:507442..511102- (Ectocarpus species6 EcLAC_371)back to top |