mRNA_Ecto-sp6_S_contig97.18729.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig97.18729.1
Unique NamemRNA_Ecto-sp6_S_contig97.18729.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: D8LL92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL92_ECTSI)

HSP 1 Score: 641 bits (1653), Expect = 3.070e-229
Identity = 327/338 (96.75%), Postives = 328/338 (97.04%), Query Frame = 1
Query:    1 MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGGSERTCRACSRRQAKGQPAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE 1014
            MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGG+ERTCRACSRRQAKGQPAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFH LVAE        VAVPG GPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE
Sbjct:    1 MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGGAERTCRACSRRQAKGQPAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHVLVAE--------VAVPGSGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE 330          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A6U1NKJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NKJ8_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.250e-41
Identity = 97/265 (36.60%), Postives = 148/265 (55.85%), Query Frame = 1
Query:  226 LPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNA---ELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAA--GSVFLSAYAEERVEGSETDS-MWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFF 1002
            LPV   S++P+W ++ D   D +    ++ VPG ++   E G+V+PRSY   WVPE SP   ++  +  ++KDG PRY+MP +D+   K G+ WRNRGLNS+P+A  WE     A     + LS +A   VEG E ++  W  IAEK+ + D    +V+++ADPPEE  I SGFH L+      A+  + VP     G++          +R F++D  +P  +L+L  MG  G    + L   +  + + G+SEFLP+VY P +
Sbjct:   69 LPVGYTSTWPVWALE-DTPSDGSSNCRLSAVPGTSSGEGETGFVDPRSYHLFWVPEDSPPLLLRPAVVAVLKDGKPRYIMPGLDITAEKAGQVWRNRGLNSLPLAGQWESFLDTALDLSKLTLSVFARHPVEGEEGNTNAWTTIAEKVNLLDTLDRLVAIMADPPEE--ISSGFHVLIMPI---ADTTLQVPS----GTN---------NMRAFITDYPDPKRMLELPSMGSDG----SELDIQIEKILSAGKSEFLPQVYAPLY 310          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A6V1VC31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VC31_HETAK)

HSP 1 Score: 154 bits (389), Expect = 1.800e-39
Identity = 95/281 (33.81%), Postives = 151/281 (53.74%), Query Frame = 1
Query:  166 ERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIA--EKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFF 1002
            E   ERQ ISIL + G  + LP++ AS +P+W ++      + G   V   P       WV+P S+S+LW+P  SP P ++  L +L+KDG PRYV+P +D  + +GGR+WRNRG+ + P+AH W+         + +S Y  +++  +  DS W   A  E+L    A   +++++ + P E  I +GFHF+ A     A     +P             ++  R+RVFL+D+ +P  LL+LE+   G   G   L  +V  +A  GES+++P+VYR  F
Sbjct:   42 EEKKERQSISILGS-GRMETLPLSYAS-YPVWMME-----PEGGLARVPDAPEEEGGAAWVDPFSFSDLWIPMDSPQPMLRPTLMVLLKDGNPRYVLPGLDTFLEQGGRRWRNRGMRTFPMAHVWQLFLAVPPEFLKISVYTNQKIPDTINDS-WEKFADCEELGAVGALDAVLALVGEGPPE--IKNGFHFVAAPLPVPA---APIP-------------QNCQRIRVFLNDIEDPIRLLELED---GAETGGGVLDVEVTEIAPAGESQYIPDVYRQLF 293          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A836CL77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL77_9STRA)

HSP 1 Score: 139 bits (350), Expect = 5.870e-34
Identity = 102/310 (32.90%), Postives = 144/310 (46.45%), Query Frame = 1
Query:  220 QRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGP-NAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLV-------------------------------VSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVE-----------------GSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFF 1002
            ++LP    +SFP+W +D D          +++VP   +    WV PRS + LWVPEGS  P   + + ML+KDG PRY+ P +D V                               V++GGR WRNRG+ SV +AH+W+         + LSAY    V                  G++TD+ W A+AE + V  A   ++ V+ADPP EL+   G   LVA    K  A   +P              DG ++RVFLSD   P  LL++E       RG A L   V  VA+  +SE+LP++YRP +
Sbjct:   14 EQLPAGLVTSFPIWMLDPDTS-------KLSRVPDQADGSQSWVEPRSCAALWVPEGSTVPTATVGVAMLVKDGRPRYLFPHLDTVXXXXXXXXXXXXPRPSLXXXXXXXXXXXXXVVARGGRAWRNRGVASVALAHSWQQFAHVPVQDLSLSAYVGAPVPQEEGXXXXXXXXXXXXXGAKTDA-WHAVAEGVEVEAAVLQLMGVIADPPAELN--DGISILVAP--VKGAAPFPLP-------------PDGSKIRVFLSDYPAPVRLLEVETT-----RG-AQLEVRVERVASAAKSEYLPDIYRPLY 292          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S0ERZ3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ERZ3_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 4.920e-25
Identity = 92/324 (28.40%), Postives = 137/324 (42.28%), Query Frame = 1
Query:  187 FISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNA---ELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSK----GGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAY----------------AEERVEGSETDSMWGAIAEK-------------------------LPVTDAFTDIVSVLADPPEEL-DIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPG 1011
             + I S  G   +LP+A    +PLW    D         HVT++ G      E GWV+P S+ +LW+PE  P P+  L + +++KDGVPRY++P ++  ++      G  W NRGLNSVP+   W      A G   L AY                A     G+   +  GA  E                           PV +A   I+ VLA+   E+ ++G G+HF+ A                 GG+      R G ++R+ L+   +  +  D E  G+  +   A     V S+  GGESEF+PE Y+P +  G
Sbjct:   22 MVKISSIKGGSGQLPLAMCR-WPLWIASAD---------HVTKLSGAGGDEEEAGWVDPISFEQLWLPEDLPLPSSHLAVSLVIKDGVPRYLLPCIETSITTVSGVSGTVWHNRGLNSVPLGAQW-----MAWGEAPLKAYRLFSFGSDFKPPAPPPARRHPRGARAAAEEGAAEEADTAEEELPPAWEPLQVMADRPGGGGQPVEEALGSIMRVLAEAGAEIKEMGEGYHFITARVD--------------GGALPADTVRPGRKLRLILATALDDPNPNDEEWEGE--MLSFARCDTTVYSIPAGGESEFMPECYKPLYGAG 314          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S2EFX4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EFX4_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.050e-21
Identity = 77/242 (31.82%), Postives = 116/242 (47.93%), Query Frame = 1
Query:  196 ILSADGTE-QRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAEL---GWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVS-KGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSM---------WGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEA-STKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPAD 876
            I  A+G + Q + V  ASS+P+W++  + Q        VT+VP  +++    GWV+P S+ +LW+P   P P     LG+++KDGVPRY  P V+ +++ + G  W NRGLNS+P+A TW P            A     +   E D           W A   +  V  A   + + +A+ P EL    GF +LV    S+ A++A          S+V+     G RVR  LSD+    D
Sbjct:   64 IKIAEGPKGQTIAVNYASSWPVWYVTHNGQ-------SVTRVPDASSDELGGGWVSPSSFEQLWLPMDLPPPTASAALGLVLKDGVPRYAFPTVETILATRDGGAWHNRGLNSLPLAKTWMPFFNVVNADTLSLACYHRSMPTEENDXXXXXXXXXEEWKAAFPRTDVKGALDLLFNAIANGPNELS--EGFCYLVTPLPSSDAQSAFLTK------SAVI----PGQRVRCLLSDLDTMPD 286          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S4R144_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R144_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.230e-19
Identity = 72/196 (36.73%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  196 ILSADGTE-QRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVP-GPNAELG--WVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVD--LVVSKGGRKWRNRGLNSVPVAHTWEPVERAA-AGSVFLSAY-----AEERVEGSET--DSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLV 741
            I  A+G + Q + V  ASS+P+W++  + Q        VT+VP G + ELG  WV+P S+ +LW+P   P P     LG+++KDGVPRY  P V+  L    GG +  NRGLNS+P+A TW        A ++ L+ Y      EE  E  E   D  W A   +  V  A   + + +A+ P EL    GF FL+
Sbjct:   39 IKIAEGPKGQTIAVKYASSWPVWYVTHNGQ-------SVTRVPDGSSDELGGGWVSPSSFEQLWLPMDLPPPTASAALGLVLKDGVPRYAFPTVETALATRDGGAR-HNRGLNSLPLAKTWLQFFNVVNADTLSLACYHRSMPTEENDEDDEQKQDEEWKAAFPRTDVKGALDLLFNAIANGPNELS--EGFCFLI 224          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A448ZAV6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAV6_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.150e-13
Identity = 72/293 (24.57%), Postives = 127/293 (43.34%), Query Frame = 1
Query:  187 FISILSAD---GTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGS------VFLSAYAEERVEGSETDSMWGAIAEKLP---VTDAFTDIVSVLADPPEELDIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE*AGPL 1029
            F+ I S +   G ++ LP +    +P WF++ D      G     Q       LG+V P S  +++ P     P +KL +G+ ++ G+ R+V+P +D+   KG    RNRGL SVP+AH W      ++ +      + LS+   +R      + +W  ++  LP   +  A    +  LA+   +  +G G H +                I    + V+   +    VRV + +V +  +  D+E         +  L   +V+  +G +SE+LPE Y+P +       PL
Sbjct:   44 FVEITSLNNFGGRKESLPASFIERWPNWFLEND------GTLLRIQDEETAGGLGYVTPTSIDQIFQPVDLKRPEIKLAVGIHVRSGIIRHVLPALDISYGKGTH--RNRGLCSVPLAHNWVDFGYLSSLADYNRYQLILSSAKRQRSSDXVDNRIWDKLS-SLPGNAIARAIERAIVCLAEEDSDA-LGEGSHIIH---------------IALDDAKVLEMPKPKNDVRVTMVEVGDEGEQ-DIE---------IGILDVAIVTAMSGSDSEYLPEAYKPLYSDASLRNPL 301          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A0M0K6T8_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K6T8_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 2.960e-11
Identity = 62/237 (26.16%), Postives = 98/237 (41.35%), Query Frame = 1
Query:  409 LCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAY--AEERVEGSETDS---------------------------MWGAIAEKLPVTDAFTDIVSVLADPPEELD---IGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRG------VAALGFDVVSVANGGESEFLPEVYRPFFK 1005
            + +G+++++G PRY+ P +D  +   G++WRNRG+ SVP+A TW     + A ++ LS++  A    EG  T +                            W    +   V DA  +  + L + P+ L    +G GF FL+A    K            G      A R GGR+R+ LSD         LE+ G  G  G             + +V  G +S +LP  YR  ++
Sbjct:    1 MAIGLVLRNGEPRYIFPTIDTYLDAAGKRWRNRGIFSVPLAKTWLHYGESPADNLRLSSFVIAPTLAEGDATAAPTAXXXXXXXXXXXXSKASGRTWERFGQWEQCMDHQQVLDALDEAFAALDNLPDALSRTSLGQGFCFLIAPLPDK------------GAMLPETALRPGGRLRLLLSD---------LEDWGTDGNDGREPAWQYGDCELSMYTVPPGRDSPYLPTPYRELYE 216          
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Match: A0A7S0JIP9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JIP9_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 5.250e-11
Identity = 55/167 (32.93%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  406 KLCLGMLMKDGVPRYVMPMVDLVVSKG-GRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEEL---DIGSGFHFLVAEASTKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEE 894
            ++ LGM++++G PRY+ P +D  +    G  WRNRGLN+VP+A TW     + A S+ LSAY       S  D+    I    PV  A       L + P  L    +G GF FL+       E+   +P           A   G R+RVFLSD+ +   L + E+
Sbjct:    1 RIALGMVLRNGEPRYIFPALDTYIETADGMAWRNRGLNTVPLAKTWLHYGESPADSLRLSAYI-----SSCPDAPAEQIFGHRPVAAALDAACESLENLPPLLKRSSLGDGFCFLLCPLPDLPESEQFLP---------ARALAPGTRLRVFLSDIEKDILLPNTEQ 153          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LL92_ECTSI3.070e-22996.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U1NKJ8_9STRA1.250e-4136.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1VC31_HETAK1.800e-3933.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CL77_9STRA5.870e-3432.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0ERZ3_9EUKA4.920e-2528.40Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2EFX4_9STRA4.050e-2131.82Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S4R144_9STRA1.230e-1936.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZAV6_9STRA6.150e-1324.57Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A0M0K6T8_9EUKA2.960e-1126.16Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S0JIP9_9EUKA5.250e-1132.93Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig97contigEcto-sp6_S_contig97:507442..511102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score644.8
Seed ortholog evalue2.2e-182
Seed eggNOG ortholog2880.D8LL92
Model size1479
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG OGs2EA9U@1,2SGID@2759
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-27_001760.1
Cds size1017
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig97.18729.1prot_Ecto-sp6_S_contig97.18729.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig97 507904..511102 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350599.6157005-UTR-Ecto-sp6_S_contig97:507441..5079031682350599.6157005-UTR-Ecto-sp6_S_contig97:507441..507903Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig97 507442..507903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350599.624686-CDS-Ecto-sp6_S_contig97:507903..5081491682350599.624686-CDS-Ecto-sp6_S_contig97:507903..508149Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 507904..508149 -
1682350599.632902-CDS-Ecto-sp6_S_contig97:508871..5089691682350599.632902-CDS-Ecto-sp6_S_contig97:508871..508969Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 508872..508969 -
1682350599.64078-CDS-Ecto-sp6_S_contig97:509179..5094061682350599.64078-CDS-Ecto-sp6_S_contig97:509179..509406Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 509180..509406 -
1682350599.6484048-CDS-Ecto-sp6_S_contig97:509922..5100091682350599.6484048-CDS-Ecto-sp6_S_contig97:509922..510009Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 509923..510009 -
1682350599.6561067-CDS-Ecto-sp6_S_contig97:510410..5105651682350599.6561067-CDS-Ecto-sp6_S_contig97:510410..510565Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 510411..510565 -
1682350599.6640043-CDS-Ecto-sp6_S_contig97:510898..5111021682350599.6640043-CDS-Ecto-sp6_S_contig97:510898..511102Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 510899..511102 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig97.18729.1

>prot_Ecto-sp6_S_contig97.18729.1 ID=prot_Ecto-sp6_S_contig97.18729.1|Name=mRNA_Ecto-sp6_S_contig97.18729.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=339bp
MRAPVALLGTFTVLSTAHGFIVRPKVVHSRRSGGSERTCRACSRRQAKGQ
PAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGR
KHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRY
VMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEER
VEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHFLVAEA
STKAEAAVAVPGIGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMG
KGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE*
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mRNA from alignment at Ecto-sp6_S_contig97:507442..511102-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig97.18729.1 ID=mRNA_Ecto-sp6_S_contig97.18729.1|Name=mRNA_Ecto-sp6_S_contig97.18729.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3661bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:507442..511102- (Ectocarpus species6 EcLAC_371)
ATGAGGGCGCCCGTAGCGCTGTTGGGCACATTCACGGTGTTATCAACCGC TCATGGCTTCATTGTGCGCCCCAAGGTCGTTCACAGCAGAAGAAGCGGCG GCTCCGAAAGGACGTGTCGCGCATGTTCCCGCAGGCAGGCCAAGGGTCAA CCCGCGATTGAACGAGAGCGGCCTGCGGAGAGACAGTTCATCTCCATCTT GTCGGTAGGCCTTTGTCTTAGCCCAACAGGGGTGTCGGTGGCAACGCGTA GCCAGGGTAGGCTGGAACACAGAAACAGCAGGTTGGCTGCTACTTGCTGC GGACGATGTCCGTTGCCGAGGTTGATGCAACCGTCACCAAGACTTTGTAG CGCATTGGAGGCGGCTTCATGACTTTCTGCTGCGCGTACGTGTACATACA TGCCTACAAATTTCTAGCTGCACTCCCCGCATGGACTCATCGGCGTGCTA GTGCAATCTGCTCGTGGAAGGTAGTGAGAGCAACTCGAACCAATCTCTCG TTGCGCGCGATATCTACTGCTGTACCGCGAGTATTAGGCCGATGGGACCG AGCAAAGGCTGCCGGTGGCGTCGGCCTCTAGCTTCCCTCTGTGGTTCATC GACGGCGATGAGCAGGTTGACGACGCCGGAAGAAAGCACGTTACCCAAGT TCCGGGACCAAACGCAGAGCTTGGCTGGGTTAATCCACGAAGGTGTGTGT GTGTCTGTGTGTACATGGTGGGGTGGTAGCAAACAGCCCCAAACAGTCTA GCCCCTTATTGTCGACGAAGAAACAAGGCTCACACGACGACCCCCTGCAT CCCCCCTGAATTTTGGTCAGTGAAGGTTGTCTGTAATATTCGAACCAGCG CTCGTTTATCAGCGCTTGTCTTGTGGTTTCCCTTGTAAAAGTCCTCGTAC CCGAAGTATGTATATGGTACTACAGTAGACAAGGCGGACGCGTGCACCGG TAAGCCTTCGCCTTTCTCGGTTCGTTCGTGTTCCGCCAGCCGTTCAAACA GCCTTGAATACAGGATTTTTTCACCCTCAGCCCTGTACCTGCGTAAAACG CGCACGTCGATGCTCTCACCCTCGTCCGCCTTCACTCTCGCAGCTACAGT GAGCTGTGGGTTCCAGAAGGCAGCCCTGCGCCCGCCATGAAGCTATGCCT GGGCATGCTGATGAAGGACGGTGTTCCCAGGTGGGGTTTCGGCGGGGAGA AAAGCAATGTCAATCCTTGTACACATGTCTACGAACAACGTTGTTTTGAA AAAGATTCCGGCGGAGTTTTTTTTTAAACGATACCGCAGAGTTTCTTTGT AAATGTCCTCGTCATGGCTCGGTTTACGCTCTCTCCGCATTCGTGAAGAT ACCGATCTTTGTTTCTGTGACGCCTTCCCTTCCCTAAGGGAACGACTCAG AGTAGGCACGTACATGTTTCCTGTGGTTGTACAACTTCGTGAACAGCAGT TTCCAGCAATGTTGCTTGCCAGCAATCTGTCAACATCAGCCAGCGCTCCG ATTGGTCGACAGCCCCGTTCTGTGCTGATTTTGTCCCGAAAGAGGTGCCC TGCGACACCGCTATGTCATCACTGCACCACCATGCCGACACGCACGACCT GAAACCGTCGAGTGCACCCACCCCCACGGAAAGCACGCGCACCGACACTC GTCGTCTTCGACCGTTTTCCCTTACCCTTGACAACAAACAACAAAGGTAC GTGATGCCAATGGTGGATCTAGTCGTGTCCAAGGGAGGCCGGAAGTGGCG AAATCGGGGCTTAAACAGCGTCCCCGTCGCGCACACGTGGGAGCCGGTCG AGCGCGCGGCGGCGGGCAGCGTGTTCCTCTCGGCGTACGCCGAGGAGAGG GTGGAAGGAAGCGAGACGGACAGCATGTGGGGCGCTATCGCCGAGAAGCT GCCTGTCACGGACGCGTTCACTGGTGCGACGTGAACACCCACCAGCTGTT TGACGCGTCCTTGCTTGTGTCGTGGTGTTGTTTCCCCCCCCGCCCTATTG CTGTAGGTTCACCTTCATCTAAAACAACGGCTGTGTTCAGGGTTGCCTTG TACTGAACGCTTACACTTTCTTTGCACGATTGTGATGGTGCGCCTTTTCG TTCGCGTGCTTGGGGGCAATATTCCGCTCGCAGACATCGTGAGCGTTTTG GCGGACCCACCAGAAGAGCTGGACATCGGAAGCGGCTTCCACTTTCTGGT GGCAGAGGCGAGTACGAAAGCTGAAGCAGCAGTCTGACAGTGCTGCAGAC GGACGGGCAGGCCGTTGGCCGGGCGCGTCAAGCGCCTCCGAACGATTTGA CAGGAATGGAGGATATCGTCGTCCCAAAGTATCATGGTTGATCTCTACGA CAACTTCTCAGAAAGTTGACAAAGTAGGTCTCCGCCGACACTCGAACCCT TTCGCCCAAAATATCACAAAAATAGCCGTTCGCTGAACGTCAGTTTTGGC ATAACAACGCTTTGATGCGTAGCGGCGGCAGTGCATGGAGCTCTTGTGCT ACCTTACTCGGCGGCATGTTTCGGAATTTTCTCTGGCTACATTGTATCTT GGCGAAGTCGAAGGTGTGCCGTTTCCTCCGACCTGCCACCATTCCGCTCC TACTGATCTATCGCGCCATCTTGCACGTCAATTTCCTCTTGCCTTCCGTG GCGCCACACATCAACACAGCCTCAGCAATTTTCTTCGCTGACGGACCAGC ACCACCGCTAGGAGACATACGAATCCCTCGAACTTCGTCCGGCTCTATTG CTTGCTCTTCATTGCCACCCATCCGGCATCCAGCATTCAGCTTATTCAAC CACACATACCTAACTCCAGAAGAAACACGCGCACATCTCCAAACATTTCG ACGCAACTTGGTCGCGCGTGGTGTGCCGAAACTTAAACTCCTCGGTTGGA CCATTGTTGTTGTTGTTGTTGTTGTTGTTGTCGCTCTGTCACCGCAAAAT CAGGTCGCCGTCCCCGGTATTGGTCCCGGAGGGTCGTCGGTGGTTGCAGC AGCCCGCGACGGGGGGCGGGTGCGCGTGTTTCTGAGCGATGTGTCCGAGC CGGCAGATCTGTTGGACCTAGAGGAGATGGGGAAAGGAGGCATCCGGGGG GTGGCGGCGCTGGGCTTCGACGTTGTGTCTGTCGCAAACGGCGGGGAGAG CGAGTTTTTGCCCGAGGTTTACAGGCCATTTTTCAAGCCGGGGGAGTAGG CGGGCCCGCTGGTGCTGTCTCGCGCGCAGGCGGATAAATAGATGGCTTTG ACCAAGACCCTGAAAATCCTGCGAGTACGGCGAGAGATGCGAGTGCTGTT GTTAAAGGCAGGCCCTGACTTTGTTGTGCGAGAAAACTTGCCTTTTCGAG CTGAAGTACTTCGCTTGTCGGCGGACGATCCCATCCTTCGGCAGGGAAGG ACGGAGGATAAGTCGTATCCTGGTGTTGGGGTGCGCTTCTGACGCACGCT GTGGCTCTATTTTGTGATGCTAAATAAATGGTGATGCTCGTAGTAAATGT AGAGGGGAGAGAGTCGGGCACTTGGCCAGGTGCTTGCACAAGAGATGTCG GGTTGCTGATGTTTCGTTGCTGTAAACTGTATGCGTTGTGAAGTCTTCCA TAACCACGATGTTATGAATCGGGTGAAAGGCTAACAAGAAATCGGGCACA TCATCCACGTT
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig97:507442..511102-

>mRNA_Ecto-sp6_S_contig97.18729.1 ID=mRNA_Ecto-sp6_S_contig97.18729.1|Name=mRNA_Ecto-sp6_S_contig97.18729.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1017bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:507442..511102- (Ectocarpus species6 EcLAC_371)
ATGAGGGCGCCCGTAGCGCTGTTGGGCACATTCACGGTGTTATCAACCGC
TCATGGCTTCATTGTGCGCCCCAAGGTCGTTCACAGCAGAAGAAGCGGCG
GCTCCGAAAGGACGTGTCGCGCATGTTCCCGCAGGCAGGCCAAGGGTCAA
CCCGCGATTGAACGAGAGCGGCCTGCGGAGAGACAGTTCATCTCCATCTT
GTCGGCCGATGGGACCGAGCAAAGGCTGCCGGTGGCGTCGGCCTCTAGCT
TCCCTCTGTGGTTCATCGACGGCGATGAGCAGGTTGACGACGCCGGAAGA
AAGCACGTTACCCAAGTTCCGGGACCAAACGCAGAGCTTGGCTGGGTTAA
TCCACGAAGCTACAGTGAGCTGTGGGTTCCAGAAGGCAGCCCTGCGCCCG
CCATGAAGCTATGCCTGGGCATGCTGATGAAGGACGGTGTTCCCAGGTAC
GTGATGCCAATGGTGGATCTAGTCGTGTCCAAGGGAGGCCGGAAGTGGCG
AAATCGGGGCTTAAACAGCGTCCCCGTCGCGCACACGTGGGAGCCGGTCG
AGCGCGCGGCGGCGGGCAGCGTGTTCCTCTCGGCGTACGCCGAGGAGAGG
GTGGAAGGAAGCGAGACGGACAGCATGTGGGGCGCTATCGCCGAGAAGCT
GCCTGTCACGGACGCGTTCACTGACATCGTGAGCGTTTTGGCGGACCCAC
CAGAAGAGCTGGACATCGGAAGCGGCTTCCACTTTCTGGTGGCAGAGGCG
AGTACGAAAGCTGAAGCAGCAGTCGCCGTCCCCGGTATTGGTCCCGGAGG
GTCGTCGGTGGTTGCAGCAGCCCGCGACGGGGGGCGGGTGCGCGTGTTTC
TGAGCGATGTGTCCGAGCCGGCAGATCTGTTGGACCTAGAGGAGATGGGG
AAAGGAGGCATCCGGGGGGTGGCGGCGCTGGGCTTCGACGTTGTGTCTGT
CGCAAACGGCGGGGAGAGCGAGTTTTTGCCCGAGGTTTACAGGCCATTTT
TCAAGCCGGGGGAGTAG
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