mRNA_Ecto-sp6_S_contig97.18679.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: A0A6H5JNV2_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV2_9PHAE) HSP 1 Score: 893 bits (2307), Expect = 0.000e+0 Identity = 505/639 (79.03%), Postives = 527/639 (82.47%), Query Frame = 1
Query: 1 MATQQTIRVVRWRDVGSEGVMSYMAPKMAQNHPLLMSGHWAHQVLNKDAAQRWSTFTGIKSVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRR---EAGSA*RHRGRVPHAF---------LCLGGRPPPDQPVDGGSGDND*PTLRRQPQPSLRSQGEQAGRSAAAGYDSRCSRHAGVL*VRKSPGLQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAAGMPEFYAAIFGTGEEMAATGGGEEDGRNRAQAATAAATAETTETSGTVQLAGSEGIGRAQQPATGAACDGVIVGAGGVGGFGVNGGTAGQASYGSGVASSGEAAGSVALLAGHVGAGEXXXXXXXAVATMNTAVWGGDGARCEASLQAQQQQXXXXXXXXXXXXXDVEAGAAGVASQEVSGVALQERLVHLREAFAREQCGVVLNRAVGW 1881
MATQ+TIRVVRWRDVGSEGVMSYMAPKMA+NHPLLM G+WAHQVLNKDAAQRWSTF GIKSVLA RGLDQLRVDISCTKKG+SFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPV+SR E SA R P L +G + + N L+ + +L A A + S + H+G LQPAETA +V GDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPS HMRNY+LRCL+ESLLADRLREATAGDEDRRAIMAAADIEVATVTGDH PKPAADTSAAAAVEREWSPL PTSTVEERNLYLRT+GTD MKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGA GMPEFYAAIFGTGEEMAATGGGEED RNRA+ ATAAATA TET GTVQLAGSEGIGR QQPATGAACDG +VGAGGVG F V+GG AGQASYGSGVAS GEAAGSVALL GHVGAGE A+ TMNTAVWGGDGARCEASLQAQQQQ XXXXXXXX DV AGAAG ASQEVSGVALQERLV LREAF REQCGVVLNRAVGW
Sbjct: 1 MATQRTIRVVRWRDVGSEGVMSYMAPKMAENHPLLMCGYWAHQVLNKDAAQRWSTFAGIKSVLATRGLDQLRVDISCTKKGNSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVISREEGKPEVLSAIAGEFRTPSCVAEEDLLQINLWMGAMETTTN-LHYDANHNLLFVLKGSKRVALLPPDMTADVDAMPVF-SESANHSG---------LQPAETAILVHGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSGHMRNYHLRCLVESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHVPKPAADTSAAAAVEREWSPLCGPTSTVEERNLYLRTMGTDRMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATGGGEEDARNRAEGATAAATAGATETGGTVQLAGSEGIGRTQQPATGAACDGAVVGAGGVGRFRVDGGGAGQASYGSGVASGGEAAGSVALLPGHVGAGEAAAAAAAAITTMNTAVWGGDGARCEASLQAQQQQLXXXXXXXXVSQQDVGAGAAGFASQEVSGVALQERLVRLREAFVREQCGVVLNRAVGW 628
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: D8LLE0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE0_ECTSI) HSP 1 Score: 563 bits (1450), Expect = 1.570e-194 Identity = 310/390 (79.49%), Postives = 319/390 (81.79%), Query Frame = 1
Query: 1 MATQQTIRVVRWRDVGSEGVMSYMAPKMAQNHPLLMSGHWAHQVLNKDAAQRWSTFTGIKSVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRR---EAGSA*RHRGRVPHAF---------LCLGGRPPPDQPVDGGSGDND*PTLRRQPQPSLRSQGEQAGRSAAAGYDSRCSRHAGVL*VRKSPGLQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 1134
MATQQTIRVVRWRDVGSEGVMSYMAPKMAQNHPLLMSGHWAHQVLNKDAAQRWSTFTGIKSVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSR E SA R P L +G + + N L+ + +L AG A + S + H+G LQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE
Sbjct: 1 MATQQTIRVVRWRDVGSEGVMSYMAPKMAQNHPLLMSGHWAHQVLNKDAAQRWSTFTGIKSVLAARGLDQLRVDISCTKKGDSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSREEGKPEVLSAIAGEFRTPSCVSKEDLLQINLWMGAMETTTN-LHYDANHNLLFVLKGSKRVALLPPDMTAGVHAMPVF-SESANHSG---------LQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 379
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: A0A067C9Y8_SAPPC (JmjC domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9Y8_SAPPC) HSP 1 Score: 102 bits (254), Expect = 1.280e-19 Identity = 87/276 (31.52%), Postives = 122/276 (44.20%), Query Frame = 1
Query: 181 SVLAARGL---DQLRVDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRREAGSA*RHRGRVPHAFLCLGGRPPPDQPVDGGSGD-ND*PTLRRQPQPSLRSQGEQAGRSAAA--GYDS-----RCSRHAGVL*VRKSPGLQPAETAAV------VDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAI 954
++LA+ G + VD++C D++ GD RQ V LK D V EA+ GQ HW E L +YL QCP+ S + +PH PPP + N TL QA R+ YD+ R ++H + G P + + +D +A A + V +A+FIPEGWWHQV S T+AVN WF G RPAL + P HM+ YY R L+E +LA ++A DR+ +
Sbjct: 17 ALLASAGFVAHHETVVDVACAPVAEDAYSGDVCLRQSVELKFGDFVAYYEAKRRGQSHWLMDTEDELQFYLAQCPLQSTTPATPAV------LPHLASTF---PPPKAIAEMALTQVNLWMTL-------------QASRTTLHYDAYDNVLTVVRGAKHVKLFAPTSDVGAHPVTSKSANHARLTLDELDARAPDATFT-VTPTDALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLLEDMLAHARKQALQAYLDRQQV 267
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: K3W726_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W726_GLOUD) HSP 1 Score: 95.9 bits (237), Expect = 2.450e-17 Identity = 113/377 (29.97%), Postives = 148/377 (39.26%), Query Frame = 1
Query: 208 QLRVDISCTKKGDSF-RGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRREAGSA*RHRGRVPHAFLCLGGRPPPDQPVDGGSGDND*PTLRRQPQPSLRSQGEQAGRSAA--AGYDSRCSRHAG-------VL*VRKSPGLQP-AET-----------------AAVVDGDEAARKGAVYAD-----VAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLY-LRTIGTDSMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEA 1236
Q VDI+C +F G++ SRQ V LK D V EA GQ HW D L++YLCQCP+ R +A + ++ F+ P+ S+ S E + A + SR S H VL RK L P +ET V D V A V G+A+ IPEGWWHQV S T+AVN WF G R L + P M YY R L+E L+ RE A + RR M E+ GD +ER LR + +E L L T+G ++ R+A E P +W L+ V+TT WEA
Sbjct: 42 QTVVDIACKAPSSTFYSGEERSRQNVELKFGDFVLFYEASHAGQRHWLQ-DVDDLEFYLCQCPIAVYRPDATCSQPVLPKIMDEFML------PE---------------------SVASYSESLSQVNLWIAVHSSRTSLHYDAYRNILVVLYGRKVVTLYPPSETRNLYAYPVHTKSTNHSQVNVAQPDLVKHPRFVNATSQRFIVNAGDALVIPEGWWHQVDSDAYTIAVNFWFDGVRQQLAQAPD--MTPYYSRVLLEDLMK---RETDAYLQQRRQRMI--QQELGQERGDF-------------MERI---LRCQSQAEKENMLIALDTLGPSEFRDAQVRLASEHPSEWRFLLENASEDFVAVLTTSWEA 367
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: T0QUU3_SAPDV (JmjC domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QUU3_SAPDV) HSP 1 Score: 95.1 bits (235), Expect = 3.790e-17 Identity = 92/299 (30.77%), Postives = 124/299 (41.47%), Query Frame = 1
Query: 85 AQNHPLLMSGHW-AHQVLNKDAAQRWSTFTGIKSVLAARGL---DQLRVDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRREAGSA*RHRGRVPHAFLCLGGRPPPDQPVDGGSGD--ND*PTLRRQPQPSLRSQGEQAGRSAAA--GYDS-----RCSRHAGVL*VRKSPGLQP-----AETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREA 924
A P L+ W AH D A ++LA+ G + VD++C D++ GD RQ V LK D V EA+ GQ HW E L +YL QCP+ S + +PH PP + + G + N TL QA R+ YD+ R ++H + + P A A + + AR V A+FIPEGWWHQV S T+AVN WF G RPAL + P HM+ YY R L+E +L + A
Sbjct: 3 ADRRPCLLPMAWHAHAAQGDDDATT--------ALLASAGFVAHHETVVDVACAPVAEDAYSGDVRLRQSVELKFGDFVAYYEAKRRGQAHWLMDTEDELQFYLAQCPLHSTAPATPAV------LPHLVSTF----PPPKAIAGMALTQVNLWMTL-------------QASRTTLHYDAYDNVLTVVRGAKHVKLFAPTTNVDAHPVTSKSANHAQLTLYELDARAPDATFTVTPTNALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP--HMQPYYARVLMEDMLTHARKHA 268
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: A0A836CMX0_9STRA (Cupin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX0_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.290e-16 Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 2
Query: 413 KPEVLSAIAGEFRTPSCVSEEDLLQINLWMGAVETTTNLHYDANHNLLFVLKGSKRVALLPPDMTAGVHAMPVFSESANHPGYS 664
KP + +A FR P+ + E +LLQI LW G ET+TNLHYD NHN+LFVL GSK V LLPP T V A P ++ + NH S
Sbjct: 15 KPVAVPQLAPCFRAPAFIDETELLQICLWAGPQETSTNLHYDCNHNVLFVLAGSKVVTLLPPSATPRVKAFPAYATTPNHSALS 98
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: W4GXF1_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXF1_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.210e-14 Identity = 73/246 (29.67%), Postives = 99/246 (40.24%), Query Frame = 1
Query: 217 VDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRREAGSA*RHRGRVPHAFLCLGGRPPPDQPVDGGSGDND*PTLRRQPQPSLRSQGEQAGRSAAAGYDSRCSRHAGVL*VRKSPGLQPAETAAVVDGDEAARKGAVYA----------------DVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLL 903
VD++CT+ D + GD RQ V LK D V +A+ G HW E L +YL QCP++S + + +PH + PP + N T+ A + YD+ VL K L P V+ K + + DV A++IPEGWWHQV S TVA+N WF G RP L P+ M YY R L+E L+
Sbjct: 42 VDVACTQPSEDVYSGDVRLRQSVELKFGDFVAYFQAKAAGTSHWLMDTENDLHFYLAQCPLLSTSTDVPAV------LPHLLPAMASLRPPILDNIQLTQINLWMTI--------------ASSDTSVHYDAY-ENVLHVLQGTKCVRLYPPSATPVIQAHAIYSKSSNHTTLSLAQTKALPHFIEFDVHANMALYIPEGWWHQVRSEPLTVAMNYWFDGMRPTLVAQPA--MVPYYARVLVEDLV 264
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: A0A1V9ZL82_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL82_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.240e-14 Identity = 72/243 (29.63%), Postives = 100/243 (41.15%), Query Frame = 1
Query: 217 VDISCTKKGDS-FRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRREAGSA*RHRGRVPHAFLCLGGRPPPDQPVDGGSGDND*PTLRRQPQPSLRSQGEQAGRSAAAGYDS--------RCSRHAGVL*VRKSPGLQP-----AETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLL 903
VD++C ++ + GD RQ V LK D V A+ G HW E L +YL QCP++S + P L G P P + + P + A + YD+ R +++ + + P A + + D AR+ V A+FIPEGWWHQV S T+AVN WF G RPAL P HM+ YY R L+E L+
Sbjct: 40 VDVACAPPSEAAYSGDVRLRQSVELKFGDFVAYYSAKCSGGTHWLMETEDELQFYLAQCPLLSTQ-------------PSTPAVLPGLAPLFPPPAA---------IAKVPMTQVNLWMTLAASATTLHYDAYDNILRVVRGTKYVRLFTPTSAVAAHPVYSKSANHSLLQMADIEAREPTYSFTVTPNNALFIPEGWWHQVSSEPFTIAVNYWFDGLRPALVMHP--HMQPYYARVLVEDLI 258
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: A0A024U5K3_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5K3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.340e-14 Identity = 76/257 (29.57%), Postives = 115/257 (44.75%), Query Frame = 1
Query: 217 VDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRREAGSA*RHRGRVPHAFLCLGGRPPPDQPVDGGSGDND*PTLRRQPQPSLRSQGEQAGRSAAAGYDSRCSRHAGVL*VRKSPGLQP------AETAAVVDGDEA-ARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLLADRLREAT--AGDEDRRAIM 957
VD++CT+ D++ GD RQ V LK D V +A++ G HW E L +YL QCP+ S + + +P+ C PP + N T+ PS S A + + S+ + +P +QP + ++ +E+ A V +V A++IPEGWWHQV S+ TVAVN WF G R L P+ M YY R ++E L+ +A A D+ R ++
Sbjct: 42 VDVACTQPSVDAYSGDVRLRQSVELKFGDFVAYYQAKQGGSFHWLMEAESDLQFYLAQCPLYSTSADVPAV------LPNLLPCCAALKPPVLDTVDVTQINLWMTVA----PSDTSVHYDAYENILHVVEG--SKRVRLYPPSATPAIQPHAIYSKSSNHTILTLEESKALPDFVEFNVDANTALYIPEGWWHQVHSASFTVAVNYWFDGMRSRLLAQPT--MVPYYARVVVEDLVRSARLDAMKDAVDQSRHRLL 284
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: W4GYF0_9STRA (JmjC domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYF0_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.970e-14 Identity = 73/246 (29.67%), Postives = 99/246 (40.24%), Query Frame = 1
Query: 217 VDISCTKKG-DSFRGDKASRQQVNLKLMDMVEIAEAQELGQPHWASSDEVGLDYYLCQCPVVSRRREAGSA*RHRGRVPHAFLCLGGRPPPDQPVDGGSGDND*PTLRRQPQPSLRSQGEQAGRSAAAGYDSRCSRHAGVL*VRKSPGLQPAETAAVVDGDEAARKGAVYA----------------DVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCLIESLL 903
VD++CT+ D + GD RQ V LK D V +A+ G HW E L +YL QCP++S + + +PH + PP + N T+ A + YD+ VL K L P V+ K + + DV A++IPEGWWHQV S TVA+N WF G RP L P+ M YY R L+E L+
Sbjct: 42 VDVACTQPSEDVYSGDVRLRQSVELKFGDFVAYFQAKAAGTSHWLMDTENDLHFYLAQCPLLSTSTDVPAV------LPHLLPAMASLRPPILDNIQLTQINLWMTI--------------ASSDTSVHYDAY-ENVLHVLQGTKCVRLYPPSATPVIQAHAIYSKSSNHTTLSLAQTKALPHFIEFDVHANMALYIPEGWWHQVRSEPLTVAMNYWFDGMRPTLVAQPA--MVPYYARVLVEDLV 264 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig97.18679.1 >prot_Ecto-sp6_S_contig97.18679.1 ID=prot_Ecto-sp6_S_contig97.18679.1|Name=mRNA_Ecto-sp6_S_contig97.18679.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=341bp MRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPback to top mRNA from alignment at Ecto-sp6_S_contig97:30446..36703+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig97.18679.1 ID=mRNA_Ecto-sp6_S_contig97.18679.1|Name=mRNA_Ecto-sp6_S_contig97.18679.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6258bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:30446..36703+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig97:30446..36703+ >mRNA_Ecto-sp6_S_contig97.18679.1 ID=mRNA_Ecto-sp6_S_contig97.18679.1|Name=mRNA_Ecto-sp6_S_contig97.18679.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1023bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:30446..36703+ (Ectocarpus species6 EcLAC_371)back to top |