prot_Ecto-sp6_S_contig97.18679.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig97.18679.1
Unique Name	prot_Ecto-sp6_S_contig97.18679.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	341

Homology

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BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: A0A6H5JNV2_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV2_9PHAE)

HSP 1 Score: 526 bits (1355), Expect = 6.230e-182
Identity = 299/340 (87.94%), Postives = 306/340 (90.00%), Query Frame = 0

Query:    1 MRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAAGMPEFYAAIFGTGEEMAATGGGEEDGRNRAQAATAAATAETTETSGTVQLAGSEGIGRAQQPATGAACDGVIVGAGGVGGFGVNGGTAGQASYGSGVASSGEAAGSVALLAGHVGAGEXXXXXXXAVATMNTAVWGGDGARCEASLQAQQQQXXXXXXXXXXXXXDVEAGAAGVASQEVSGVALQERLVHLREAFAREQCGVVLNRAVGW 340
            MRNY+LRCL+ESLLADRLREATAGDEDRRAIMAAADIEVATVTGDH PKPAADTSAAAAVEREWSPL  PTSTVEERNLYLRT+GTD MKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGA GMPEFYAAIFGTGEEMAATGGGEED RNRA+ ATAAATA  TET GTVQLAGSEGIGR QQPATGAACDG +VGAGGVG F V+GG AGQASYGSGVAS GEAAGSVALL GHVGAGE       A+ TMNTAVWGGDGARCEASLQAQQQQ XXXXXXXX    DV AGAAG ASQEVSGVALQERLV LREAF REQCGVVLNRAVGW
Sbjct:  289 MRNYHLRCLVESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHVPKPAADTSAAAAVEREWSPLCGPTSTVEERNLYLRTMGTDRMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATGGGEEDARNRAEGATAAATAGATETGGTVQLAGSEGIGRTQQPATGAACDGAVVGAGGVGRFRVDGGGAGQASYGSGVASGGEAAGSVALLPGHVGAGEAAAAAAAAITTMNTAVWGGDGARCEASLQAQQQQLXXXXXXXXVSQQDVGAGAAGFASQEVSGVALQERLVRLREAFVREQCGVVLNRAVGW 628

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BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Match: D8LLE0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE0_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 9.550e-47
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query:    1 MRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 91
            MRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE
Sbjct:  289 MRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 379

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig97.18679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JNV2_9PHAE	6.230e-182	87.94	JmjC domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D8LLE0_ECTSI	9.550e-47	100.00	JmjC domain-containing protein n=1 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig97	contig	Ecto-sp6_S_contig97:34529..36585 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig97.18679.1	mRNA_Ecto-sp6_S_contig97.18679.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig97 30446..36703 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig97.18679.1 ID=prot_Ecto-sp6_S_contig97.18679.1|Name=mRNA_Ecto-sp6_S_contig97.18679.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=341bp
MRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATVTGDHAPKP
AADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKEELPRVAHER
PQDWARLVSGLDPLTAYVVTTQWEAAGGAAGMPEFYAAIFGTGEEMAATG
GGEEDGRNRAQAATAAATAETTETSGTVQLAGSEGIGRAQQPATGAACDG
VIVGAGGVGGFGVNGGTAGQASYGSGVASSGEAAGSVALLAGHVGAGEAA
AAAAAAVATMNTAVWGGDGARCEASLQAQQQQLQANQQQRKVSQQDVEAG
AAGVASQEVSGVALQERLVHLREAFAREQCGVVLNRAVGW*