prot_Ecto-sp6_S_contig96.18607.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig96.18607.1
Unique Nameprot_Ecto-sp6_S_contig96.18607.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length102
Homology
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BLAST of mRNA_Ecto-sp6_S_contig96.18607.1 vs. uniprot
Match: A0A6H5K143_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K143_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 8.440e-56
Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0 
Query:    2 CGTCFRSEHPDLVETFQVRTEHFVLAELQRRMPELEGIFLSWDCPLPCAISTERADMLWQIGSVLLHVEVDETATHEDDRNRLMRLLAGTDAVDHIVVRIH 102
            CG+C RSEH DL++ F+V+TEHFVLAELQRRMPELE  FLSWDCPLPCAISTERADMLWQIGS LLHVEVDE ATHEDDR RLMRLLAGTD+VDHIVVRIH
Sbjct:  229 CGSCVRSEHLDLLKRFKVKTEHFVLAELQRRMPELENNFLSWDCPLPCAISTERADMLWQIGSTLLHVEVDEIATHEDDRKRLMRLLAGTDSVDHIVVRIH 329
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BLAST of mRNA_Ecto-sp6_S_contig96.18607.1 vs. uniprot
Match: A0A6H5L073_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L073_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.460e-55
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = 0 
Query:    1 LCGTCFRSEHPDLVETFQVRTEHFVLAELQRRMPELEGIFLSWDCPLPCAISTERADMLWQIGSVLLHVEVDETATHEDDRNRLMRLLAGTDAVDHIVVRIH 102
            LCG+C RSEHPDL + F+VRTEHFVLAELQRRMPELEG FLSWDCPLP AISTERADMLWQIGSVLLHVEVDETATHEDDRNRLMRLLAGTDAV HIVVRIH
Sbjct: 2137 LCGSCLRSEHPDLAKKFKVRTEHFVLAELQRRMPELEGNFLSWDCPLPYAISTERADMLWQIGSVLLHVEVDETATHEDDRNRLMRLLAGTDAVHHIVVRIH 2238
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K143_9PHAE8.440e-5686.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L073_9PHAE1.460e-5591.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig96contigEcto-sp6_S_contig96:79810..80115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig96.18607.1mRNA_Ecto-sp6_S_contig96.18607.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig96 79810..80115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18607.1 ID=prot_Ecto-sp6_S_contig96.18607.1|Name=mRNA_Ecto-sp6_S_contig96.18607.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=102bp
LCGTCFRSEHPDLVETFQVRTEHFVLAELQRRMPELEGIFLSWDCPLPCA
ISTERADMLWQIGSVLLHVEVDETATHEDDRNRLMRLLAGTDAVDHIVVR
IH
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