prot_Ecto-sp6_S_contig92.18421.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18421.1
Unique Nameprot_Ecto-sp6_S_contig92.18421.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length368
Homology
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BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Match: D7FPS5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS5_ECTSI)

HSP 1 Score: 655 bits (1690), Expect = 1.350e-231
Identity = 353/368 (95.92%), Postives = 360/368 (97.83%), Query Frame = 0 
Query:    1 MLERLSASDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVSDNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASEPQYRITVLMACKKIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVEERRQRSEGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPEATRSTAVSAAVATLGLNEGRKSNNRQRKKIARTGKERTGTKR 368
            MLERLSASD VFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLS+NSIRSIEAPRSAYAFRRMKSLKLASNHLI+FEEDAALELTSLERLDVSDN+LVSIDWVGLVETLRFLDCSKNRLSALPTFARALAN PRLAEVIAEGNTVAS+PQYRITVLMAC+KIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVE+RRQR EGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPE     AVSAAVATLGLNEG+KSNNRQRKKIARTGKERTGTKR
Sbjct:  306 MLERLSASDWVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSSNSIRSIEAPRSAYAFRRMKSLKLASNHLINFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANLPRLAEVIAEGNTVASQPQYRITVLMACEKIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVEDRRQRGEGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPEVA---AVSAAVATLGLNEGKKSNNRQRKKIARTGKERTGTKR 670
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BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Match: A0A6H5KZ74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ74_9PHAE)

HSP 1 Score: 571 bits (1472), Expect = 3.690e-197
Identity = 305/331 (92.15%), Postives = 317/331 (95.77%), Query Frame = 0 
Query:    1 MLERLSASDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVSDNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASEPQYRITVLMACKKIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVEERRQRSEGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPEATRST 331
            MLERLSA DSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRS YAF+RMKSLKLASNHL+SFEEDAALELTSLERLDVSDN+LVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASE QYRITVLMACK IRRLDHRPVD AALKRQLHRATEAKALA+LRETANEEYHRCVE EGIRLE+RKSILKAQERQLEDAFQGFRLQKQRE+GECIAYAESLKGDGDGKGLVLTPEVAR FRDAVE+RRQ SE K+KFA  SGDVTTDERTQD++ S+K  LRAAVAQEHPEATRS+
Sbjct:  346 MLERLSARDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRSGYAFQRMKSLKLASNHLMSFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASESQYRITVLMACKNIRRLDHRPVDRAALKRQLHRATEAKALASLRETANEEYHRCVEEEGIRLEKRKSILKAQERQLEDAFQGFRLQKQREIGECIAYAESLKGDGDGKGLVLTPEVARDFRDAVEDRRQGSEEKSKFA-DSGDVTTDERTQDENCSLKTTLRAAVAQEHPEATRSS 675
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BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Match: A0A1Y1XDQ8_9FUNG (L domain-like protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XDQ8_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 1.660e-5
Identity = 38/137 (27.74%), Postives = 67/137 (48.91%), Query Frame = 0 
Query:   45 LRHVDLSNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVSDNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARA--LANPPRLAEVIAEGNTVASEPQYRITVLMACKKIRRLDHRPVDG 179
            L H++  NN + + +   +     ++K L LA N +   E     +LT LE+L + +NK+ ++D  G  E L+ L     R + + +F     L   P L  VI + N +AS+P YR+ ++M    ++ LD   +  
Sbjct:  168 LIHLEARNNKLETTQGINTP----KLKELYLAKNEITKIE--GIDQLTELEKLHLRENKISNLD--GFTEDLKMLSEINLRANEIESFEEIDKLKCLPNLKRVILQENPIASDPNYRVEIIMRLPNLKILDKEEITN 296
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPS5_ECTSI1.350e-23195.92Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZ74_9PHAE3.690e-19792.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1XDQ8_9FUNG1.660e-527.74L domain-like protein n=1 Tax=Anaeromyces robustus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 45..58
score: 40.86
coord: 91..104
score: 51.0
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 25..355
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 2..178
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 69..126
e-value: 2.6E-6
score: 27.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 44..65
score: 7.08
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 115..136
score: 5.941
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 69..90
score: 5.61
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 93..114
score: 6.395
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 18..39
score: 5.155
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..85
e-value: 5.8E-8
score: 34.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 86..181
e-value: 1.2E-14
score: 55.9
IPR027734Dynein assembly factor 1, axonemalPANTHERPTHR45973:SF9DYNEIN ASSEMBLY FACTOR 1, AXONEMALcoord: 25..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:440432..444905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18421.1mRNA_Ecto-sp6_S_contig92.18421.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 440432..444908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18421.1 ID=prot_Ecto-sp6_S_contig92.18421.1|Name=mRNA_Ecto-sp6_S_contig92.18421.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=368bp
MLERLSASDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDL
SNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVS
DNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGN
TVASEPQYRITVLMACKKIRRLDHRPVDGAALKRQLHRATEAKALATLRE
TANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECI
AYAESLKGDGDGKGLVLTPEVARAFRDAVEERRQRSEGKNKFAAGSGDVT
TDERTQDDDRSVKAALRAAVAQEHPEATRSTAVSAAVATLGLNEGRKSNN
RQRKKIARTGKERTGTKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR027734DNAAF1