mRNA_Ecto-sp6_S_contig92.18421.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig92.18421.1
Unique NamemRNA_Ecto-sp6_S_contig92.18421.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Match: D7FPS5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS5_ECTSI)

HSP 1 Score: 657 bits (1694), Expect = 3.460e-232
Identity = 354/369 (95.93%), Postives = 361/369 (97.83%), Query Frame = 1 
Query:    1 RMLERLSASDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVSDNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASEPQYRITVLMACKKIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVEERRQRSEGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPEATRSTAVSAAVATLGLNEGRKSNNRQRKKIARTGKERTGTKR 1107
            RMLERLSASD VFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLS+NSIRSIEAPRSAYAFRRMKSLKLASNHLI+FEEDAALELTSLERLDVSDN+LVSIDWVGLVETLRFLDCSKNRLSALPTFARALAN PRLAEVIAEGNTVAS+PQYRITVLMAC+KIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVE+RRQR EGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPE     AVSAAVATLGLNEG+KSNNRQRKKIARTGKERTGTKR
Sbjct:  305 RMLERLSASDWVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSSNSIRSIEAPRSAYAFRRMKSLKLASNHLINFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANLPRLAEVIAEGNTVASQPQYRITVLMACEKIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVEDRRQRGEGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPEVA---AVSAAVATLGLNEGKKSNNRQRKKIARTGKERTGTKR 670
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Match: A0A6H5KZ74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ74_9PHAE)

HSP 1 Score: 573 bits (1476), Expect = 9.530e-198
Identity = 306/332 (92.17%), Postives = 318/332 (95.78%), Query Frame = 1 
Query:    1 RMLERLSASDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVSDNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASEPQYRITVLMACKKIRRLDHRPVDGAALKRQLHRATEAKALATLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESLKGDGDGKGLVLTPEVARAFRDAVEERRQRSEGKNKFAAGSGDVTTDERTQDDDRSVKAALRAAVAQEHPEATRST 996
            RMLERLSA DSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRS YAF+RMKSLKLASNHL+SFEEDAALELTSLERLDVSDN+LVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASE QYRITVLMACK IRRLDHRPVD AALKRQLHRATEAKALA+LRETANEEYHRCVE EGIRLE+RKSILKAQERQLEDAFQGFRLQKQRE+GECIAYAESLKGDGDGKGLVLTPEVAR FRDAVE+RRQ SE K+KFA  SGDVTTDERTQD++ S+K  LRAAVAQEHPEATRS+
Sbjct:  345 RMLERLSARDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRSGYAFQRMKSLKLASNHLMSFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASESQYRITVLMACKNIRRLDHRPVDRAALKRQLHRATEAKALASLRETANEEYHRCVEEEGIRLEKRKSILKAQERQLEDAFQGFRLQKQREIGECIAYAESLKGDGDGKGLVLTPEVARDFRDAVEDRRQGSEEKSKFA-DSGDVTTDERTQDENCSLKTTLRAAVAQEHPEATRSS 675
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Match: A0A1Y1XDQ8_9FUNG (L domain-like protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XDQ8_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 1.670e-5
Identity = 38/137 (27.74%), Postives = 67/137 (48.91%), Query Frame = 1 
Query:  136 LRHVDLSNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVSDNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARA--LANPPRLAEVIAEGNTVASEPQYRITVLMACKKIRRLDHRPVDG 540
            L H++  NN + + +   +     ++K L LA N +   E     +LT LE+L + +NK+ ++D  G  E L+ L     R + + +F     L   P L  VI + N +AS+P YR+ ++M    ++ LD   +  
Sbjct:  168 LIHLEARNNKLETTQGINTP----KLKELYLAKNEITKIE--GIDQLTELEKLHLRENKISNLD--GFTEDLKMLSEINLRANEIESFEEIDKLKCLPNLKRVILQENPIASDPNYRVEIIMRLPNLKILDKEEITN 296
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Match: W4GKG7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKG7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.090e-5
Identity = 75/285 (26.32%), Postives = 125/285 (43.86%), Query Frame = 1 
Query:    7 LERLSASDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDLSNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVSDNKLVSIDWV----------GLVETL---------------RFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTVASEPQYRITVLMACKKIRRLDHRPVDGAALKR--QLHRATEAKALA---TLRETANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECIAYAESL 771
            + R+ + D +   + SN++    S NQ+ ++  L         LR + L NN + S+      +    +  L +  N++ S     A   + L  L+VS+NKLVS+D V          G V  L               R L   +NRLS L T A  +   P L +V    N VA    YR+  L    ++R LDH+ +  A  +   ++    + +AL    TL   A+ +  + V  +GIR  R      A+E+++ DAF  ++   +RE+ +C+ +A  L
Sbjct:   78 INRMRSLDGIL--VFSNVRELRLSLNQLSTLPPLNHLVH----LRLLYLGNNYLTSLTW---LWHPNTLTHLDVTGNNIASLAGVDACR-SCLHVLNVSENKLVSLDGVQHLLQLRELWGHVNELQDDSSFVHVLPLCHLRVLSLGQNRLSNLDTVASVVLGLPNLDDVSFVNNPVADCDLYRMR-LCQHPRLRVLDHKTITTAMRQSFTRMRNTQDVEALVEQTTLGYLAHVDMQKHVLDQGIRFHR------AREQRMTDAFTQYKHNMERELDDCVHFAHVL 345
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FPS5_ECTSI3.460e-23295.93Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZ74_9PHAE9.530e-19892.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1XDQ8_9FUNG1.670e-527.74L domain-like protein n=1 Tax=Anaeromyces robustus... [more]
W4GKG7_9STRA4.090e-526.32Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:440432..444908 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1107
Hectar predicted targeting categoryother localisation
Exons6
Cds size1104
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18421.1prot_Ecto-sp6_S_contig92.18421.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig92 440432..444905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350562.7513993-CDS-Ecto-sp6_S_contig92:440431..4405441682350562.7513993-CDS-Ecto-sp6_S_contig92:440431..440544Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 440432..440544 -
1682350562.759551-CDS-Ecto-sp6_S_contig92:441488..4417711682350562.759551-CDS-Ecto-sp6_S_contig92:441488..441771Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 441489..441771 -
1682350562.767421-CDS-Ecto-sp6_S_contig92:442487..4425821682350562.767421-CDS-Ecto-sp6_S_contig92:442487..442582Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 442488..442582 -
1682350562.7752948-CDS-Ecto-sp6_S_contig92:442906..4430661682350562.7752948-CDS-Ecto-sp6_S_contig92:442906..443066Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 442907..443066 -
1682350562.7830126-CDS-Ecto-sp6_S_contig92:443409..4435611682350562.7830126-CDS-Ecto-sp6_S_contig92:443409..443561Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 443410..443561 -
1682350562.7910044-CDS-Ecto-sp6_S_contig92:444604..4449051682350562.7910044-CDS-Ecto-sp6_S_contig92:444604..444905Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 444605..444905 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350562.798882-UTR-Ecto-sp6_S_contig92:444905..4449081682350562.798882-UTR-Ecto-sp6_S_contig92:444905..444908Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig92 444906..444908 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig92.18421.1

>prot_Ecto-sp6_S_contig92.18421.1 ID=prot_Ecto-sp6_S_contig92.18421.1|Name=mRNA_Ecto-sp6_S_contig92.18421.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=368bp
MLERLSASDSVFTDIPSNIQVFLASNNQIGSVQALGKRPKKGAGLRHVDL
SNNSIRSIEAPRSAYAFRRMKSLKLASNHLISFEEDAALELTSLERLDVS
DNKLVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGN
TVASEPQYRITVLMACKKIRRLDHRPVDGAALKRQLHRATEAKALATLRE
TANEEYHRCVEGEGIRLERRKSILKAQERQLEDAFQGFRLQKQREMGECI
AYAESLKGDGDGKGLVLTPEVARAFRDAVEERRQRSEGKNKFAAGSGDVT
TDERTQDDDRSVKAALRAAVAQEHPEATRSTAVSAAVATLGLNEGRKSNN
RQRKKIARTGKERTGTKR
back to top

mRNA from alignment at Ecto-sp6_S_contig92:440432..444908-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig92.18421.1 ID=mRNA_Ecto-sp6_S_contig92.18421.1|Name=mRNA_Ecto-sp6_S_contig92.18421.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4477bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:440432..444908- (Ectocarpus species6 EcLAC_371)
CGAATGCTCGAACGACTCTCAGCCAGCGATTCGGTCTTCACGGATATCCC
TTCCAATATACAGGTATTTCTGGCCTCAAACAACCAAATTGGTTCTGTAC
AGGCACTAGGGAAGCGGCCGAAGAAGGGCGCCGGTCTCCGTCACGTGGAC
CTCTCCAACAACTCAATACGCTCGATAGAAGCCCCCCGCTCCGCATATGC
CTTCCGACGTATGAAGAGCCTCAAGCTTGCCAGCAACCACCTGATAAGCT
TCGAGGAGGACGCCGCTCTCGAGCTCACGTCGCTCGAACGGCTTGACGTT
TCCGGTGCGTCTGTGGATACAGCGCGTTAGTCACGCTAGCCTTGCACGTT
CGGCTAGCCTTAGCTTTACCTTGTGGATAGTGCGTCGGTCACGACAGCCT
AGCACATTCGGCGATATTAGTCACCTTTCCGGCTTGCAGCAGCGGAATGG
TTATTGTCCCACACCAGAGACTACCGATTGAGTTTGAAGTAATAGCGTCC
ACGCTGAGGTATCTCGTGCTTGCCAGAATCCTGAGACCATGCTTTCGGCC
CTCCGACCTCGATAGCCACCACCTCCAGAGCGTCTGTGGGGCGGAGCCCT
AATCTGTTTCTGTGACAGCGAGTTCCGTAGAGAGTCCCAAGCTGTGCATG
AACCCCGAAATACTTCGGCTTGGAAAGTGTTGCAGGTAAACACGGTGGTG
CACGAGGATCCGAACTAAACTCGAGCACGTCTCGTTCGGTGGTGTCTTCC
TAGTCAATCCTCTCTCAACAACTTCATCAGTAGTCCTAGCCCAAACACTC
GATGAAAACATGCCGACAACCCTTAAACCGCAGCTAACTGTGACTGCTGT
GGTTATTTTTGGTAGCAGTAAATGTGCTTTTGACTGTTGGATTTGGAGCG
TTCGCACTGCAGCGAACGAGTGGCTTATGTTGTTGAGTAGGTTGCTGGCA
TTTCCCCCCTTTCGGCAGAAACGGCCCTTGCTGGCTGGGCCAATCGGTGC
CCGGCTGATTCCTTAGCGTCTTGAGCCGCCTTCTACCGATCTTTTTATGG
ACATCTGTCTCTCGGCGCAGCTGCTTCAGCCATGTTTCTTCAAAGCCTAT
GAATATCATCGAGTAGACCGAAAGACACTGGGGGCGACGCACTGGTTCGG
TTGTCGCGACTCGTTCTCTTCTGAGGCGGATATTTCAAGTCTTGCCTGCC
ATTGGCTTCGGAATAAGTCTCTCTGTCTGCGCGATGATGCTCTGCAGATT
AATGGCCGCAGACTTATTTGCTCATGTTCGTTGCTCATTGCTTGGCTCCC
TGGTCAAACTTTCCACCTCGTGCCCTTTGCCCCTTGTATTGCCACAGACA
ACAAGCTCGTTTCCATAGACTGGGTGGGGTTGGTAGAGACGCTGCGTTTT
CTCGACTGTTCCAAGAACCGGCTCTCGGCCCTTCCTACCTTCGCTAGAGC
CTTGGCCAACCCCCCTCGCCTGGCGGAAGTTATCGCTGAGGGAAACACGG
TAGGCCGCGCGTGAGCGACGCCTCTTGCAGTCTGGGCGAACGGAGACATT
ACAGTGACTCGATGATTTGGTCGGCCCGACCCAAAAGTAGGTTGTAAAAC
GGGCCTCTAGTTAGATCCCAATACAATACCAGCGATGCCATCATGAATCG
TCAACGGTCACAACAACCACGGCAGCAGCCGCAGCAACAGCAGCAGCAAA
GGCTTGTAGCCCCAAAAGTTCGAGCCGTGCCCTTTGTTATGCGAGACGAG
TGCAGCGACTAGACAGCCCTAGCCGAAAGTATCACTGCACGACTCCAAGA
AACCGGAACGGTTACTACGGCGATGCACTCCCCGCAATACAGGTGGCGTC
CGAACCCCAGTACCGCATCACAGTGCTGATGGCGTGCAAAAAGATTCGAA
GGTTGGACCATCGGCCTGTAGACGGAGCGGCACTCAAGCGGCAGCTCCAC
CGCGCCACGGAGGCGAAGGCTTTGGCCACTTTGCGAGAAACGGCCAACGA
GGGTAAGACTTTCACATCCGCCCGCCCTCTCTCTTGTCTCGCGTTCTGCC
GCTTGTTTGCCACCCTCTGCCTTCTCTGCACCTCTATATCTCTGGCTCTC
AGTGATTGGGCTTCTCATCAAATATCGTTGTCTTGAACGAGTCGAAAAGT
GTAGGTTGTACCTCCAGCGACCGCAGTCTGTATATACGTGTCAAGATAGC
CGTAAAGACTGCTACTTCCCCGCCGACCGTACCTTCTACTGCTCGCCTGA
GAACCAAGCCCATACGGCTGGTTGCTCGTTGTGCGCGTTGATATTGTTCG
TTCACTTTCATGGTCCTGGGATTAAGAGTATCACCGATGTGTGGAGGGAG
AGGGCATTCGCTTGGAGAGGCGAAAGTCAATCCTCAAGGCCCAGGAAAGG
CAACTCGAGGACGCCTTTCAGGTGATGGGGCCCCCAACCATGACGTCACA
CCGCGTTCAAAAACAAATTTGGGGAACAGGCATTCTTCAAAATCCGGCCA
AATATGGGTGGGGTGTAAGCTAATTCAATTCGAAGTACGAGGAGAGGGCG
ATCGTTTTTCGGATAGTTCAAGGGGGACTGTGTGAGGGGGAAATCTTGGG
ACGATTCTGGCGGCTATTAGGATGGAGATGGTAAATACGAACCAGGCACG
GGCTATGAATTGGATATATGGTGGGCGTGATACGGCGAGGGAGAAGACGT
GTACAGTGTGCGTCACTACCTGAAAACCTCGCACTTTTGCACTAGACTCG
TTGCTTATTCCTTCTGTGGGGTGACCCAACACCAAAAAATATACCTGGTA
GGTGTTAGGCTTCATAGGACTCTTAACTTAGCAGCTGTTCTTATCGTCAA
GCATATCGAGTTGTCTCTTTTTCTAGCCGTGACTTTCTCAACACTCAGGT
TCGCAGGTGGTGGCATGCACTGTACGGCGTGGCTGTCAACTTGGGGGATA
CCGTGTGATCTGGGGTTGGCATGGGGGCAGCCGCCACTCACAAGTAGCAC
AACGCTTCCGTGCTTTCTCGGGACCCGAGTGGGCATTCAACGTGGAAAAT
GTGTCGTGGGATAGGGAGATTGGACCGACCGTGTACCGGTCTTCTCGGCC
GGGCTCTTCGTTTGTGTTTGTGTGCTCCCGACTGCAGGGGTTTCGCCTTC
AGAAGCAGCGGGAGATGGGGGAGTGCATCGCGTACGCGGAGTCCCTGAAG
GGAGACGGCGACGGGAAAGGGTTGGTGTTGACGCCGGAGGTGGCACGCGC
TTTCCGAGACGCGGTGGAAGAAAGGCGGCAGAGGAGCGAAGGGAAGAACA
AGTTCGCGGCGGGTAGCGGTGACGTCACGACTGATGAGCGAACCCAGGAT
GATGACCGGAGCGTGAAGGCCGCCTTGCGCGCTGCTGTTGCGCAGGAACA
CCCTGAGGCAACGAGGAGCAGTAGCAGCGGCAGCAACAGCAACTGCAACA
GTTGCGGCAGCGGTGGTCGCCGCGACAATAGCGGCGCGTTTAGCGACGAC
GGTGGGCACGACGGCACCGACGATTTCTCAGAATACTCCCAACACGGGAG
CGGTGCCGGGAGAAGTCGAGCAAACAGCAGCGGGCGAGAGATGACTAGCA
CCGGCGGCCGAGGAGGAGACCCCGGAAGGCGTGGGAAAGGTGAAGGCAAA
CCGATACACACGACACCGGCACATAGTTACTCGGCGGCGACACGTTTCAG
GACCGATTTCGTTCGCGGCGGAAGCCCTGAATATGAATGCCGCCCGCAAC
AAATGCGGCACCAACTTCCGCATGTAGCAATCGTGCAGCAAACACCTTTA
TTTTTTCCCTTTGACACGTCGTCAGATCACGGGTCTGAATAAACCCCCAA
TGAAATGTCGATTTTCTTTAAACGTAGGCCACATATAGATAAGTCAGGCG
GCGGACACACCAGCAGAGCGACCGAAGGGTATATAGAAGGGTCCGAGGGA
GCAGAGGAAAATTGAACCCGCCGCTGTGCATCAAGTGTACGTCTGTCCCA
CCTCACAAAAGTCTCAGCTTTTCTCGGCAGGGCAGCGATGATTAGCCCAT
CGCTGCAAAAGTGCGCCCCGCTTAGCTTGGGGGCCCTGCGTTGCGAAAAC
GATCGGTCGCGAAGCCCGATGGCCCCGGCGCGCCCTGACAATCTCCGACA
ACCCCCCCCGTAACAGCCTCTTCCTTCTCGTTTATTTTTCCTCGACACGG
CCACTTGAGCAGCCCTGAGTTCCGTGGTCCCCGAGCACATTTCTCAGATG
TTCCTCTGTGTATTGGTACGTTAGATGTTGCGGTACGATGAAAACTCCAA
CGTAACATGATGGGCGATATTTTCCCCTCCTCTCGGCCTTTTTCCTTCCC
TTCGGTGCAGGTAGCGGCGGTGTCGGCCGCCGTGGCGACTCTGGGGTTGA
ACGAGGGAAGAAAAAGCAACAACAGGCAAAGGAAAAAAATCGCAAGGACG
GGGAAAGAGCGGACGGGAACAAAAAGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:440432..444908-

>mRNA_Ecto-sp6_S_contig92.18421.1 ID=mRNA_Ecto-sp6_S_contig92.18421.1|Name=mRNA_Ecto-sp6_S_contig92.18421.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1104bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:440432..444908- (Ectocarpus species6 EcLAC_371)
ATGCTCGAACGACTCTCAGCCAGCGATTCGGTCTTCACGGATATCCCTTC
CAATATACAGGTATTTCTGGCCTCAAACAACCAAATTGGTTCTGTACAGG
CACTAGGGAAGCGGCCGAAGAAGGGCGCCGGTCTCCGTCACGTGGACCTC
TCCAACAACTCAATACGCTCGATAGAAGCCCCCCGCTCCGCATATGCCTT
CCGACGTATGAAGAGCCTCAAGCTTGCCAGCAACCACCTGATAAGCTTCG
AGGAGGACGCCGCTCTCGAGCTCACGTCGCTCGAACGGCTTGACGTTTCC
GACAACAAGCTCGTTTCCATAGACTGGGTGGGGTTGGTAGAGACGCTGCG
TTTTCTCGACTGTTCCAAGAACCGGCTCTCGGCCCTTCCTACCTTCGCTA
GAGCCTTGGCCAACCCCCCTCGCCTGGCGGAAGTTATCGCTGAGGGAAAC
ACGGTGGCGTCCGAACCCCAGTACCGCATCACAGTGCTGATGGCGTGCAA
AAAGATTCGAAGGTTGGACCATCGGCCTGTAGACGGAGCGGCACTCAAGC
GGCAGCTCCACCGCGCCACGGAGGCGAAGGCTTTGGCCACTTTGCGAGAA
ACGGCCAACGAGGAGTATCACCGATGTGTGGAGGGAGAGGGCATTCGCTT
GGAGAGGCGAAAGTCAATCCTCAAGGCCCAGGAAAGGCAACTCGAGGACG
CCTTTCAGGGGTTTCGCCTTCAGAAGCAGCGGGAGATGGGGGAGTGCATC
GCGTACGCGGAGTCCCTGAAGGGAGACGGCGACGGGAAAGGGTTGGTGTT
GACGCCGGAGGTGGCACGCGCTTTCCGAGACGCGGTGGAAGAAAGGCGGC
AGAGGAGCGAAGGGAAGAACAAGTTCGCGGCGGGTAGCGGTGACGTCACG
ACTGATGAGCGAACCCAGGATGATGACCGGAGCGTGAAGGCCGCCTTGCG
CGCTGCTGTTGCGCAGGAACACCCTGAGGCAACGAGGAGCACGGCGGTGT
CGGCCGCCGTGGCGACTCTGGGGTTGAACGAGGGAAGAAAAAGCAACAAC
AGGCAAAGGAAAAAAATCGCAAGGACGGGGAAAGAGCGGACGGGAACAAA
AAGG
back to top