prot_Ecto-sp6_S_contig9.18278.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18278.1
Unique Nameprot_Ecto-sp6_S_contig9.18278.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length649
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 587..627
e-value: 5.0
score: 12.6
coord: 107..145
e-value: 100.0
score: 4.4
coord: 198..248
e-value: 480.0
score: 0.1
coord: 155..194
e-value: 0.0021
score: 27.3
coord: 483..522
e-value: 1.1
score: 16.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 161..194
e-value: 0.0098
score: 16.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 162..194
score: 11.578
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 464..645
e-value: 3.4E-10
score: 41.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 41..298
e-value: 6.1E-17
score: 63.7
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 112..633
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 162..203
score: 10.364
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 67..632

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2603910..2608661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18278.1mRNA_Ecto-sp6_S_contig9.18278.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2603910..2608661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18278.1 ID=prot_Ecto-sp6_S_contig9.18278.1|Name=mRNA_Ecto-sp6_S_contig9.18278.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=649bp
MATRLRARPARRRGSARYPWSLQPVSRIALGHHPLEFVRRKAWTSAPVRF
GNGISAVTSLCLCDEASVGGPSLLISGDEDGGVSVQRVQTEREGGSEGSS
PSPPGWLGTPERTRLHSSCVNTIKILPDQRGYVCAGDDGALSAVATFETC
SEEDLRRATFALTGHSSFVTDCDTAESGHAILSSSTDGRMLLWDPVATNT
PVASVSVGRPVNSACFSAGDPYALLCAPELGTNCTRGHGNDDLVQIWDLR
SLRCFKDAIPAAVATAFGEDPPATTPHDASMQPPPPQSPQFWTTSTTRSS
TARTPAHVPPWLSMVLGSSVPSPATPLLRRPAWTGDSNDAESVASSTRGS
REQCSYETPSGKENDFPLRSSGGSTTSRISSASSSCSNSPWSGRRGGTEG
ASNPGFNPSPSSKDRGQQGPAGPTRQVLLPARDEPHARLSVSSLPASGCL
HEGNGKTWIPGGLKTWQASRRRVRTAGARICAGEACVACSNSAAASACSV
QVSSDGKGILVGSRNRTVTLFDTQSHEVVYRFGHPRLSRARPVLVESSPN
GGVGGWGRGRGGTGSGDVFAGTMEGELRSWRVGSQFPNRVFKKASHHQGF
EIYSVAISNSGCMFASSDSSGAVYVQSATSGRDAQDSSGADAKHSGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam