prot_Ecto-sp6_S_contig9.18143.1 (polypeptide) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18143.1 vs. uniprot
Match: D8LLV6_ECTSI (tRNA-intron lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV6_ECTSI) HSP 1 Score: 486 bits (1250), Expect = 3.170e-169 Identity = 304/326 (93.25%), Postives = 304/326 (93.25%), Query Frame = 0
Query: 1 MVLLRALLQGDVAKLFFPTHRCEERHREDRRHDGDGKGIGYILERSFGKVSEACSPREFPLISSXXXXXXXXXXPAATIGSGLRCLQLSLEEAFYLAHVDESLALAVPRANLVVPTAPIALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LSGEEAFGCGFGXXXXXXXXXXXXXPLLSAEEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGGNGSGDSWSHVKTMTRLMPDVAKSLLVCGVTYRPQGPTPETGLSPPIDTSSLAALAAAEVTALRFSRSRDSDG 324
MVLLRALL GDVAKL FPTHRCEERHREDRRHDGDGKGIGYILERSFGKVSEACS RE P ISSXXXXXXXXXXPAATI SGLRCLQLSLEEAFYLAHVDESLALAVPRANLVVPTAPIALPXXXXXXXXXXXXX XXXXXXXXXXXXXX LSGEEAFGCGFGXXXXXXXXXXXXXPLLSAEEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGG G GDSWSHVKTMTRLMPDVAKSLLVCGVTYRPQGPT ETGLSPPIDTSSLAALAAAEVTALRFSRSRDSDG
Sbjct: 1 MVLLRALLLGDVAKLVFPTHRCEERHREDRRHDGDGKGIGYILERSFGKVSEACSQRELPSISSXXXXXXXXXXPAATIDSGLRCLQLSLEEAFYLAHVDESLALAVPRANLVVPTAPIALPXXXXXXXXXXXXXEEPPGLLHDWHXXXXXXXXXXXXXXXSLSGEEAFGCGFGXXXXXXXXXXXXXPLLSAEEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGGGGRGDSWSHVKTMTRLMPDVAKSLLVCGVTYRPQGPTLETGLSPPIDTSSLAALAAAEVTALRFSRSRDSDG 326
BLAST of mRNA_Ecto-sp6_S_contig9.18143.1 vs. uniprot
Match: A0A482RRC4_9ARCH (tRNA_int_endo domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRC4_9ARCH) HSP 1 Score: 75.1 bits (183), Expect = 3.620e-12 Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0
Query: 187 LLSAEEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGGNGSGDSWSHVKTMTRLMPDVAKSLLVCGVTYRPQG 287
+LS E+ +R C + P F AVY HFR +F V + ++G + LY PP HS + V V G G +W + +TR+ PDV K+LL+C V +G
Sbjct: 97 ILSCEDFFRVCVQQDPLFSRRLAVYSHFRALNFVVRSALQFGGSFALYRAPPSRRHSEHLVLVLRG-GEALTWRELSALTRIAPDVMKTLLLCWVRQEGEG 196
BLAST of mRNA_Ecto-sp6_S_contig9.18143.1 vs. uniprot
Match: A0A2R5LL66_9ACAR (tRNA-intron lyase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LL66_9ACAR) HSP 1 Score: 69.7 bits (169), Expect = 1.300e-9 Identity = 43/127 (33.86%), Postives = 60/127 (47.24%), Query Frame = 0
Query: 164 EEAFGCGFGXXXXXXXXXXXXXPLLSAEEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGGNGSG---------DSWSHVKTMTRLMPDVAKSLLVCGV 281
EEAF FG LL E W+ C RP+FPA + VY HFR + + V TG KYG Y+LY+ P H+ + V V G+ SW+ + + RL + K++L+C V
Sbjct: 152 EEAFFLSFGLGCLIVQEDGKDLELL---ELWQRLCTLRPNFPARYTVYHHFRTKGWVVRTGSKYGTDYLLYKDGPPFYHATFSVLVRSTQGAELREVQDCRFRSWTSLSGLVRLNFNSTKTVLLCYV 275
BLAST of mRNA_Ecto-sp6_S_contig9.18143.1 vs. uniprot
Match: M4YIW8_THEXX (tRNA intron endonuclease n=1 Tax=Thermoplasmatales archaeon (strain BRNA1) TaxID=1054217 RepID=M4YIW8_THEXX) HSP 1 Score: 63.2 bits (152), Expect = 2.160e-7 Identity = 30/83 (36.14%), Postives = 39/83 (46.99%), Query Frame = 0
Query: 199 NRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGGNGSGDSWSHVKTMTRLMPDVAKSLLVCGV 281
+ +F Y R R V TG KYG H+ +YEG PDECH+RY VH + W + RL V K +L C +
Sbjct: 254 KNQDEFDLRLKAYYDLRARGLVVKTGFKYGTHFRVYEGSPDECHARYLVHAVTASKIA-MWPEISRTVRLSGGVRKEILFCRI 335
BLAST of mRNA_Ecto-sp6_S_contig9.18143.1 vs. uniprot
Match: A0A0W7TI51_9ARCH (Endonuclease n=1 Tax=Candidatus Methanomethylophilus sp. 1R26 TaxID=1769296 RepID=A0A0W7TI51_9ARCH) HSP 1 Score: 63.2 bits (152), Expect = 2.790e-7 Identity = 34/95 (35.79%), Postives = 45/95 (47.37%), Query Frame = 0
Query: 187 LLSAEEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGGNGSGDSWSHVKTMTRLMPDVAKSLLVCGV 281
+LSA++ + +F Y R R V TG KYG H+ +YEG PDECH+RY VH + W + RL V K +L C V
Sbjct: 241 VLSADDIKSIGRKSQNEFGLRLRAYEDLRSRGLIVKTGFKYGTHFRVYEGSPDECHARYLVHAFQDSKVA-MWPEISRTVRLSGGVRKEILFCRV 334 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp6_S_contig9.18143.1 ID=prot_Ecto-sp6_S_contig9.18143.1|Name=mRNA_Ecto-sp6_S_contig9.18143.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=373bpback to top |