prot_Ecto-sp6_S_contig9.18054.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18054.1
Unique Nameprot_Ecto-sp6_S_contig9.18054.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length328
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18054.1 vs. uniprot
Match: D8LM30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM30_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 2.510e-138
Identity = 226/253 (89.33%), Postives = 231/253 (91.30%), Query Frame = 0 
Query:    1 MTMSHTWPGNLRDRGQRTRDNKLLAAFAYEGRQRGSGAGGVGDDGCATVRTVLDSRADIGASMQDCNSSKEWTPFFSSTGEINDPLRVVAHAPAATLSGAKLRASPTTATTLSRELLPRALARKSASSRRPTHQGVQVESESENENDAEVAFSVPPNVKAVLRRCAAQSRDRVAGGTAAGCGGGTHTAQPAXXXXXXXXXXXXXXXXXXSRCEDRRAAFARGEQGDGSHFSAAGKTGRGSGSGGDGVTHGGSD 253
            MTMS+TWPGN  DRGQRTRD+KLLAAFAYEGRQRGSGAGGVGDDGCATVRTVLDSRADIGASMQDCNSSKEWTPFFSSTGEINDP RVVAHAPAA LSGAKLRASPTTATTLSRELLPRALARKSASSRRPTHQGVQVE+ES+NENDAEVAFSVPPNV+AVLRRCAAQSRDRVAGGTA      THTAQPAXXXXXX            SRCEDRRAAFARGEQGDGSHFSAAGKTGRGSGSGGDGVTHGGSD
Sbjct:    1 MTMSNTWPGNFNDRGQRTRDSKLLAAFAYEGRQRGSGAGGVGDDGCATVRTVLDSRADIGASMQDCNSSKEWTPFFSSTGEINDPFRVVAHAPAAALSGAKLRASPTTATTLSRELLPRALARKSASSRRPTHQGVQVENESDNENDAEVAFSVPPNVQAVLRRCAAQSRDRVAGGTAXXXXXXTHTAQPAXXXXXXTPSVTPTVAP--SRCEDRRAAFARGEQGDGSHFSAAGKTGRGSGSGGDGVTHGGSD 251
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM30_ECTSI2.510e-13889.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:620776..623621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18054.1mRNA_Ecto-sp6_S_contig9.18054.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 620776..623621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18054.1 ID=prot_Ecto-sp6_S_contig9.18054.1|Name=mRNA_Ecto-sp6_S_contig9.18054.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=328bp
MTMSHTWPGNLRDRGQRTRDNKLLAAFAYEGRQRGSGAGGVGDDGCATVR
TVLDSRADIGASMQDCNSSKEWTPFFSSTGEINDPLRVVAHAPAATLSGA
KLRASPTTATTLSRELLPRALARKSASSRRPTHQGVQVESESENENDAEV
AFSVPPNVKAVLRRCAAQSRDRVAGGTAAGCGGGTHTAQPAAAAAAAAAT
PSVTPTVAPSRCEDRRAAFARGEQGDGSHFSAAGKTGRGSGSGGDGVTHG
GSDGERGLVTGCDGLDAEEGGVGISVHDLEALLYDMGNESTSRRRPAFLA
DMGERSKSVSRMITTPFRRIRGTPKTP*
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