prot_Ecto-sp6_S_contig85.17687.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig85.17687.1
Unique Nameprot_Ecto-sp6_S_contig85.17687.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length559
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: D8LRU5_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI)

HSP 1 Score: 641 bits (1654), Expect = 2.740e-225
Identity = 375/434 (86.41%), Postives = 378/434 (87.10%), Query Frame = 0
Query:   12 MAEEGSGVPLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQATPPXXXTAPVQFAQXXXXXXXXXXXXXXXXXXXAFVSQXXXXXXXXXXXXXXXXXXXXXXXXXXRQPRALTSATSGSQ--RWATNGPQNGPPARQQATQAGQRQPAPSARPAPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLVNGGGAGRGAAGGTSAASAPARTPGAMVGTGEALLNIRARGGPATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGHNR 443
            MAEEGSGVPLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQA PP   TAPVQFAQ      XXXXXXXXX    AFVS                                + S   G+   R ATNGPQNGPPARQQATQAGQRQPAPSARP PVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQL+NGGGAGRGAAGGTSA SAPARTPGAMVGTGEALLNIRARGGPATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGHNR
Sbjct:    1 MAEEGSGVPLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQAAPPPPPTAPVQFAQPPQPTGXXXXXXXXXLLSPAFVSLLM-----------------------------MRSCGQGNPDVRRATNGPQNGPPARQQATQAGQRQPAPSARPVPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLINGGGAGRGAAGGTSATSAPARTPGAMVGTGEALLNIRARGGPATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGHNR 405          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A7S2DIJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIJ2_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.590e-25
Identity = 156/432 (36.11%), Postives = 196/432 (45.37%), Query Frame = 0
Query:   20 PLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGS---------QATPPXXXTAPVQFAQXXXXXXXXXXXXXXXXXXXAFVSQXXXXXXXXXXXXXXXXXXXXXXXXXXRQPRALTSATSGSQRWATNGPQNGPPARQQATQAGQRQPAPSARPAPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLVNGGGAGRGAAGGTSAASAPARTPGAMVGTGEALLNIRARGGPATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKS-SFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRG 440
            PL+GSRISLISKK+IRY G LY+INTS+A++ALQ+VRSFGTE R     +PP+  ++ F+ FRG DI DLH+HD++  +G          +  PP    AP                        A       XXXXXXXXXXXXXXXXXXXXXXX       SA+ GS                            +A  AP+        A   +      +  G++   + RR P   R               GAP+G         Q  N                A     GAM GTG +LL  + +G    + + A S   +++FDF S  + FDK+KE  K    L+   S+ TA         DS KKYN S SFFDE+SCD LDR   R    TR  E   N +TFG  GLQ  RR RG RG
Sbjct:    9 PLIGSRISLISKKDIRYVGFLYDINTSEATVALQDVRSFGTEHRPVPQFVPPADTIYPFIKFRGSDINDLHIHDSQPTDGEGPLQQLMGGKPQPPQQEPAPALLTGLGGFPTAISPPGVLSTASLA-PGPLLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSASFGSF---------------------------AATVAPITSQTLTHTAKAENGGAAQLEVGGRSGTDSIRRPPNKGR--------------GGAPQGSSGRNAPRMQSSN-----------PKVPGASGSRSGAMPGTGASLLTRKPKGLD-KEHRNALSAEMSEDFDFSSAAEDFDKKKEAEK----LAARGSSITAEG-------DSSKKYNPSASFFDELSCDALDRGGKRFDSQTRLDEQKKNSETFGAVGLQDNRRSRGARG 375          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A7S2EU73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EU73_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.620e-23
Identity = 165/457 (36.11%), Postives = 207/457 (45.30%), Query Frame = 0
Query:   20 PLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVE----GHV--IPPSQVLHDFVCFRGQDIMDLHVHD-----------------------AEADEGSQATPPXXXTAPVQFAQXXXXXXXXXXXXXXXXXXXAFVSQXXXXXXXXXXXXXXXXXXXXXXXXXXRQPRALTSATSGSQRWATNGPQNGPPARQQATQAGQRQPAPSARPAPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLVNGGGAGRGAAGGTSAASAPARTPGAMVGTGEALLNIRARGGPATDGKGAASVPT-AQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDS---VKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGHNR 443
            PL+GSRISLISKKNIRYEG LY+IN +DA++AL+NVRS+GTEGR +    GHV  +PP + +H ++ FRG DI DLHVH+                       A +D     + P     P Q                      +    XXXXXXXXXXXXXXXXXXXXXXXXXX                        PP+ +   + G+ QP+  +    V +  QQ+ A   SSS            +NQ+R  +G               P G  R R+N                               P   VGTG +LLN +ARG    DG GA S PT   +FDF+S L +FDK    A    G S E   S  S GG      S      Y+K  FFD ISCD +D+  G   R+  AAE  +N+DTFG   L  +RR GGR + R
Sbjct:    5 PLLGSRISLISKKNIRYEGLLYSINEADATVALENVRSYGTEGREKLDPSGHVAFVPPQEGVHAYLLFRGCDIKDLHVHESAPSVPAPXXXXXXXDPAIVSTGAPSDVAPTTSSPGNINRPEQ-QSYSDNEQQQNQTKQVEQPSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSPKTVEEDGESQPSKVS----VKKNTQQQPARSGSSS------------RNQKRGGSG---------------PGGRSRPRKN------------------------------EPAHQVGTGASLLNRKARG--VVDG-GAGSAPTPTDDFDFESNLAEFDK----ATVTNGNSNETPESDFSGGGDAEIEISGSFSNAYSKDDFFDSISCDAIDKRDGIDNRLRGAAERSLNLDTFGAVSLGTSRR-GGRRNRR 391          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A7S0XMA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0XMA5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.560e-22
Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   20 PLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRV------EGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQA-TPPXXXTAPVQFA 115
            PL+G+RISLISKKNIRYEG LY+IN SDA++ALQ+V+SFGTEGR       + + +PP   +H ++ FRGQDI DLHVH+ +    + A T P    AP   A
Sbjct:    5 PLIGNRISLISKKNIRYEGVLYSINESDATVALQDVKSFGTEGRELLDTTGQTNFVPPQDTVHTYLLFRGQDIKDLHVHEKQGTPAAAADTTPAKEEAPXXXA 107          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: B7FYW7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYW7_PHATC)

HSP 1 Score: 104 bits (260), Expect = 1.950e-21
Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 0
Query:   20 PLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGH----VIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQATPPXXXTA 110
            PL+G  ISLISKKNIRYEG LY+IN  +A++ALQNVRSFGTEGR         + PS  +H F+ FRGQDI DLHVH+A A+  + A PP   T+
Sbjct:    5 PLIGKNISLISKKNIRYEGVLYSINEQNATVALQNVRSFGTEGREATEQWLAFVGPSDDVHPFLMFRGQDIKDLHVHEAGAEAVTPAPPPPEPTS 99          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A7S2JUH1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUH1_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.980e-21
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0
Query:   20 PLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVE-----GHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQATPP 105
            PL+GSRISLISKK+IRYEGTLY+IN +DA++ALQNVRSFGTEGR +     G  IPP   +H ++ FRG DI DLHVH+  +D   +   P
Sbjct:    5 PLLGSRISLISKKDIRYEGTLYSINETDATVALQNVRSFGTEGREKRDDAAGTFIPPQATVHPYLLFRGMDIKDLHVHEKASDAAKKEDVP 95          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A7S3L9Q7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9Q7_9STRA)

HSP 1 Score: 103 bits (258), Expect = 6.230e-21
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0
Query:   20 PLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQA 102
            PL+G +ISLISKKNIRY GTLY+IN  +A++ALQNV+SFGTEGR     + PS  +H F+ FRGQDI DLHVH+    EG  A
Sbjct:    5 PLIGKQISLISKKNIRYLGTLYSINEQNATVALQNVKSFGTEGRPAPQEVAPSNDMHPFLLFRGQDITDLHVHEEGTTEGGGA 87          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A7S1G7E6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7E6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.980e-20
Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    9 AADMAEEGSGVPLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQV-LHDFVCFRGQDIMDLHVHDAEADEGSQATP 104
            AA MA+ G+GVP +GS+ISLIS   IRYEGTL+NIN  ++++ALQNVRSFGTEGR +G    P+Q  +++++ FRG DI DL V   EA+  + A P
Sbjct:   36 AAAMADAGAGVPYLGSKISLISNSEIRYEGTLFNINPQESTVALQNVRSFGTEGRRQGGPQIPAQADVYEYIIFRGADIKDLRVL-TEAERVASAAP 131          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A662XUA1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.340e-19
Identity = 147/425 (34.59%), Postives = 185/425 (43.53%), Query Frame = 0
Query:   18 GVPLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQATPPXXXTA----PVQFAQXXXXXXXXXXXXXXXXXXXAFVSQXXXXXXXXXXXXXXXXXXXXXXXXXXRQPRALT-SATSGSQRWATNGPQNGPPARQQATQAGQRQPAPSARPAPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLVNGGGAGRGAAGGTSAASAPARTPGAMVGTGEALLNIRAR---GGPATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHAR 434
            G+P +GSRISLISK +IRYEG L+NI+T  + +ALQ+VRSFGTEGR   HV P  QVL  +  F+  +I DLHV +A       A PP    A    P  +AQ                      S         XXXXXXXXXXXXXXXX   +P  LT  + S +Q   T  P+   P                    PVA  +QQ    P   S            Q+Q       +  PR+  + +P+        RR G  +S Q  N G                 RT   + G G  LL  + R   GG A  G G      + EF+F   L  FDK++E +K    L  E    T  S            Y KSSFFD ISCD LDR  G++ R+T A E  +N +TFG  GL + R
Sbjct:   24 GIPYIGSRISLISKTDIRYEGFLFNIDTRQSMVALQSVRSFGTEGRRAEHVPPSPQVLQ-YATFKASEIQDLHVCEA-------APPPPQPAASQPQPQSYAQP---------------------SYPPPMPSGPXXXXXXXXXXXXXXXXAPSKPTLLTPGSVSSAQMHQTPSPRQAQP--------------------PVAMYSQQ----PMQPS----------YDQHQXXXXXXXQSAPRASYNSNPN--------RRQGGSQSGQAANNG----------------MRT---IPGMGGHLLKRKERRVPGGNAEVG-GVGPAAASGEFNFAEGLNDFDKQEEFSK----LDEEVKPETKGS------------YQKSSFFDTISCDALDRLEGQRSRITGAEERKLNTETFGAVGLNNRR 341          
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Match: A0A1Z5JPN3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPN3_FISSO)

HSP 1 Score: 99.4 bits (246), Expect = 2.540e-19
Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 0
Query:   20 PLVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRV---EGHV-IPPSQVLHDFVCFRGQDIMDLHVHDAEADEG-SQATPP 105
            PL+G RISL+SKKNIRYEG LY+IN  +A++ALQNV++FGTEGR    EG + + P+  +H ++ FRGQDI DLHVH+  A+E  +Q T P
Sbjct:    4 PLLGKRISLVSKKNIRYEGVLYSINEQNATVALQNVKTFGTEGRELAEEGCIFVAPADTVHPYLLFRGQDIKDLHVHEQPAEEQPTQTTEP 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRU5_ECTSI2.740e-22586.41Novel Sm-like protein with long N-and C-terminal d... [more]
A0A7S2DIJ2_9STRA3.590e-2536.11Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2EU73_9STRA4.620e-2336.11Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S0XMA5_9STRA5.560e-2253.40Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
B7FYW7_PHATC1.950e-2157.89Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2JUH1_9STRA1.980e-2159.34Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3L9Q7_9STRA6.230e-2161.45Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1G7E6_9STRA1.980e-2054.64Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A662XUA1_9STRA1.340e-1934.59Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1Z5JPN3_FISSO2.540e-1957.14Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019050FDF domainSMARTSM01199FDF_2coord: 336..429
e-value: 1.5E-16
score: 71.0
IPR025609Lsm14-like, N-terminalSMARTSM01271LSM14_2coord: 16..116
e-value: 1.4E-36
score: 137.6
IPR025609Lsm14-like, N-terminalPFAMPF12701LSM14coord: 21..93
e-value: 2.3E-27
score: 94.9
NoneNo IPR availableGENE3D2.30.30.100coord: 11..96
e-value: 1.7E-29
score: 103.4
NoneNo IPR availablePANTHERPTHR13586:SF0TRAILER HITCH, ISOFORM Hcoord: 20..480
NoneNo IPR availablePANTHERPTHR13586SCD6 PROTEIN-RELATEDcoord: 20..480
IPR025761FFD boxPROSITEPS51513FFDcoord: 386..401
score: 12.169
IPR025768TFG boxPROSITEPS51536TFGcoord: 409..429
score: 12.041
IPR025762DFDF domainPROSITEPS51512DFDFcoord: 330..366
score: 8.863
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 21..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:514103..519246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17687.1mRNA_Ecto-sp6_S_contig85.17687.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig85 514103..519246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig85.17687.1 ID=prot_Ecto-sp6_S_contig85.17687.1|Name=mRNA_Ecto-sp6_S_contig85.17687.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=559bp
SSVWHSFHAADMAEEGSGVPLVGSRISLISKKNIRYEGTLYNINTSDASL
ALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGS
QATPPPPPTAPVQFAQPPQPTGPPPPSGPPPLLSPAFVSQQQQPPPPPPQ
QHARAPQVNNAQQQQKRQPRALTSATSGSQRWATNGPQNGPPARQQATQA
GQRQPAPSARPAPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTG
QRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLVNGGGAGRGAAGGTSAA
SAPARTPGAMVGTGEALLNIRARGGPATDGKGAASVPTAQEFDFQSELQK
FDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKSSFFDEISCD
VLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGHNRNKPGGGG
AGGGGQGTRGGVGAGGTGAGVGAGTANGGRGGGGGGRRGAARGSGGGGRA
RGGGGGRGSTRGGYAGGGRGGAGQARPKPKGGRGRGGNAPQGQQPTPGPT
SAPQAQAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019050FDF_dom
IPR025609Lsm14-like_N
IPR025761FFD_box
IPR025768TFG_box
IPR025762DFDF
IPR010920LSM_dom_sf