prot_Ecto-sp6_S_contig83.17553.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig83.17553.1
Unique Nameprot_Ecto-sp6_S_contig83.17553.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17553.1 vs. uniprot
Match: D7G3D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D8_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.160e-62
Identity = 103/117 (88.03%), Postives = 103/117 (88.03%), Query Frame = 0 
Query:    1 MPGTAAPQACQRCRRASEPLERERTGANSQLQVHDNEPDRGPSAEIVCFEGCCPSQDVKPQETGVADVQKASGVQEGHDIPRRKRHPRRTGGRSRRGRKAGRGGGRPKQEATGSQKT 117
            MPGTAA QACQRCRRASEPLERERTGANSQLQVHDNEPDRGPSAEIVCFEGCCPSQDVKPQETGVADVQKASGVQEGHDIPRRKRHP             GRGGGRPKQEATGSQKT
Sbjct:    1 MPGTAASQACQRCRRASEPLERERTGANSQLQVHDNEPDRGPSAEIVCFEGCCPSQDVKPQETGVADVQKASGVQEGHDIPRRKRHPXXXXXXXXXXXXXGRGGGRPKQEATGSQKT 117
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BLAST of mRNA_Ecto-sp6_S_contig83.17553.1 vs. uniprot
Match: D7G4G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G3_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 2.780e-8
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:   87 PRRTGGRSRRGRKAGRGGGRPKQEATGSQKT 117
            PRR GGRSRRGRKAGRGGGRPKQEATGSQKT
Sbjct:    2 PRRRGGRSRRGRKAGRGGGRPKQEATGSQKT 32
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17553.1 vs. uniprot
Match: D7FKZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ8_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 3.660e-7
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0 
Query:   88 RRTGGRSRRGRKAGRGGGRPKQEATGSQKT 117
            RR GGRSRRGRKAGRGGGRPKQEATGSQKT
Sbjct:   12 RRRGGRSRRGRKAGRGGGRPKQEATGSQKT 41
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17553.1 vs. uniprot
Match: D7FU68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU68_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 2.730e-6
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 0 
Query:   89 RTGGRSRRGRKAGRGGGRPKQEATGSQKT 117
            R GGRSRRGRKAGRGGGRPKQEATGSQKT
Sbjct:   56 RRGGRSRRGRKAGRGGGRPKQEATGSQKT 84
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3D8_ECTSI1.160e-6288.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4G3_ECTSI2.780e-896.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FKZ8_ECTSI3.660e-796.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU68_ECTSI2.730e-696.55Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:711502..713468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17553.1mRNA_Ecto-sp6_S_contig83.17553.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig83 711502..713468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig83.17553.1 ID=prot_Ecto-sp6_S_contig83.17553.1|Name=mRNA_Ecto-sp6_S_contig83.17553.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=118bp
MPGTAAPQACQRCRRASEPLERERTGANSQLQVHDNEPDRGPSAEIVCFE
GCCPSQDVKPQETGVADVQKASGVQEGHDIPRRKRHPRRTGGRSRRGRKA
GRGGGRPKQEATGSQKT*
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