mRNA_Ecto-sp6_S_contig82.17455.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: D7FYI6_ECTSI (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI6_ECTSI) HSP 1 Score: 590 bits (1520), Expect = 3.510e-210 Identity = 307/311 (98.71%), Postives = 307/311 (98.71%), Query Frame = 2
Query: 35 MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPPS 967
MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME EDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSV PEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPPS
Sbjct: 1 MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME---EDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVGPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPPS 308
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A835YY13_9STRA (F-actin-capping protein subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY13_9STRA) HSP 1 Score: 283 bits (724), Expect = 1.650e-89 Identity = 167/314 (53.18%), Postives = 204/314 (64.97%), Query Frame = 2
Query: 47 TEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGA-----------TSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGG--DLMSALNAK 949
T+ +S+CLNLMRR+PPKDIE +L GL+ L P DELLQR+DQPLQEATDP TGR+YL CEYNRDA SYRSPWSN YDPP+ED + D+LRQ+E DAN LLDAYRE+Y+ GG SSVYLW+ E G+ FAG FLI K EG AWES HV+QV +ATYK+N+T+MLSV TSLSGN+ E+T F++ DHL N+G MIE MEN +R +DG+YVQKTRQI+ SVR + ASA + F +QL A+G HGA+R GG ++ALN K
Sbjct: 2 TDTVSACLNLMRRMPPKDIEVNLTGLVTLAPDCMDELLQRIDQPLQEATDPVTGRQYLLCEYNRDADSYRSPWSNAYDPPLEDAYELRDQLRQLEI---DANELLDAYRELYYQGGTSSVYLWDLEE--------GSGKGFAGAFLIKKSTA----EGT--AWESIHVIQVDPDVGGGKRATYKLNSTIMLSVQXXXXXXXXXXXXXXXXXXXTSLSGNMTSAAEQTLAFASQDDHLSNIGKMIEKMENDVRMSIDGVYVQKTRQILCSVRRSN-ASAPAQGAAFTSQLNQAIGAHGAKRDGGLAAQIAALNFK 297
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A6H5KTN9_9PHAE (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN9_9PHAE) HSP 1 Score: 275 bits (704), Expect = 1.130e-88 Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 2
Query: 353 MLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 784
MLLDAYREVYFSGGVSSVYLWEEEA+G ADNATGAAGSFAGCFLILKRVGGDGEEGP GAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDP+DEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG
Sbjct: 1 MLLDAYREVYFSGGVSSVYLWEEEAEGGADNATGAAGSFAGCFLILKRVGGDGEEGPAGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPKDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 144
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A6U4L9K2_9STRA (F-actin-capping protein subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L9K2_9STRA) HSP 1 Score: 259 bits (661), Expect = 2.290e-80 Identity = 141/286 (49.30%), Postives = 189/286 (66.08%), Query Frame = 2
Query: 56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARR 913
I++CL++MRR+PP IE +L GLLNLVP TDELLQRVDQPL+E T +G++YL C+YNRD SYRSPWSN+YDPP++DGF P ++LR ME AN L D+YRE+YF GG SSVYLW+ + G FAGCFL+ K + G G+W S HV++V + +A+YK+ TTV+LS D + G+T LSG+L R+K T + + HL N+G +IE ME +RS+M+ LYVQKTR+IV+S+RS A+ + ++ F L AV HG R
Sbjct: 10 ITACLSIMRRMPPNKIEQNLSGLLNLVPDSTDELLQRVDQPLEEGTCSASGKKYLMCDYNRDGDSYRSPWSNQYDPPLDDGFVPSEQLRNMEIQ---ANELFDSYRELYFEGGTSSVYLWDLDGAG-----------FAGCFLVKKSIESTGVV-KAGSWNSIHVIEVS-EQDGGKKASYKLTTTVLLSADVDKPECGSTDLSGSLTRQKARTCEINAEHTHLSNMGEIIEDMETEMRSNMNALYVQKTREIVNSIRSM--ATGPKQEADFVNSLNAAVMAHGDTR 277
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: F0YCA6_AURAN (F-actin-capping protein subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA6_AURAN) HSP 1 Score: 257 bits (657), Expect = 8.280e-80 Identity = 146/286 (51.05%), Postives = 186/286 (65.03%), Query Frame = 2
Query: 56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARR 913
IS L++MRR+PP IE++L GLLNLVP+ TDELLQRVDQPL+EAT E+GR+YL C+YNRD SYRSPWSN Y+PP++DGF P +LR +E +AN L DAYRE+YF GG SSVYLW+ + G FAGCFLI K V G E GAW+S HVV+V ++ +ATYK+ TTVMLS+D AVG ++LSG+L R E+ H+ N+G MIE ME +R+ +D LY+QKTR++VSS+R F L AV +HG R
Sbjct: 9 ISCALSIMRRMPPNKIEHNLSGLLNLVPEHTDELLQRVDQPLEEATCAESGRKYLLCDYNRDGDSYRSPWSNAYEPPLDDGFVPSAKLRALEV---EANALFDAYRELYFEGGTSSVYLWDLD------------GGFAGCFLIKKGVSGH-EFVSTGAWDSIHVVEV--AEAGDGRATYKLTTTVMLSMDVHKPAVGDSNLSGSLTRMAEKACAVDEAHPHVANIGSMIEDMETDIRTYLDSLYIQKTREVVSSIRKLHKGPT--QDKGFTMNLNSAVLKHGKNR 274
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A7S2F5N5_9STRA (F-actin-capping protein subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5N5_9STRA) HSP 1 Score: 254 bits (650), Expect = 9.290e-79 Identity = 151/297 (50.84%), Postives = 196/297 (65.99%), Query Frame = 2
Query: 38 AESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSP-----FAAQLQGAVGQHGARR 913
A + + I + L++MRR+PP IE +L GLLNL+P TDELLQRVDQPLQEAT +TGR +L C+YNRD SYRSPWSN+YDPPI+DGFTP + LRQME DAN L D+YR+ Y+ GG SSVYLW+ + DG FAGCFLI K V G G+W+S HVV+V ++K QATYK+ +T++LS+ AVG ++LSG + ++KE T + H N+G MIE ME LRS+MD LY+ KTR+IVSS+R+ R L++P F L AV HGA++
Sbjct: 4 AGAEDPIIASLSIMRRMPPNKIEQNLSGLLNLIPDQTDELLQRVDQPLQEATCGQTGRPFLLCDYNRDGDSYRSPWSNQYDPPIDDGFTPSEALRQMEI---DANSLYDSYRDQYYEGGTSSVYLWDLD-DG-----------FAGCFLIKKSVEGHAFVS-AGSWDSIHVVEV--TEKGGGQATYKLTSTLLLSMGVNKAAVGDSNLSGCMTKQKEMTCEVTAVRPHTTNMGTMIEDMEIELRSNMDSLYISKTREIVSSMRNMR------LRAPVQGANFTNSLNQAVLGHGAKK 276
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A7S2BI12_9STRA (F-actin-capping protein subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI12_9STRA) HSP 1 Score: 254 bits (648), Expect = 1.680e-78 Identity = 144/294 (48.98%), Postives = 192/294 (65.31%), Query Frame = 2
Query: 35 MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQ 916
MA + + I+S L++MRR+PP IE +L GLLNL+P TDELLQRVDQPL+EAT T ++YL C+YNRD SYRSPWSN Y+P ++DGF P D LR ME DAN L D+YRE Y+ GGVSSVYLW+ + FAGCFL+ K V G G W+S HVV+V ++K +ATYK+ +T+ML++ + +VG ++LSG + ++KE T + H+ N+G MIE ME +RS+MD LY+QKTR+IV+S+R GA + F A L AV HGA R+
Sbjct: 1 MASAPDPITSSLSIMRRMPPNKIEQNLSGLLNLIPDQTDELLQRVDQPLEEATCSVTKKKYLLCDYNRDGDSYRSPWSNAYEPALDDGFQPSDALRAMEV---DANTLYDSYREQYYEGGVSSVYLWDLDT------------GFAGCFLVKKTVQGHAFVSD-GGWDSIHVVEV--TEKGDGKATYKLTSTLMLTMGVQKASVGDSNLSGCMTKQKELTLPVTEVKPHIVNIGSMIEDMEIDMRSNMDNLYIQKTREIVNSMRRVTGAP--KQGQNFTANLNAAVAAHGASRK 274
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A7S4A8I8_9STRA (F-actin-capping protein subunit beta n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8I8_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.690e-76 Identity = 138/287 (48.08%), Postives = 187/287 (65.16%), Query Frame = 2
Query: 56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRS-----TRGASAARLQSPFAAQLQGAVGQH 901
I + L++MRR+PP I ++L + NL+P+ DELLQRVDQPL+EA +TGR YL C+YNRD S+RSPWSNKYDPPI+DGF P ++LR++E +AN L D YRE+YF GG SSVYLWE + D FAGCFLI K+V G E G W+S HVV+V L + N A YK+ TTV+L++D + E+VG T+LSG L R E+ + H+ N+G +IE E +R +MD LY+QKTR++V+++RS ++GA+ F A L AV +H
Sbjct: 71 IEAALSIMRRMPPNKIAHNLNAICNLIPEHADELLQRVDQPLEEAKCKDTGRAYLLCDYNRDGDSHRSPWSNKYDPPIDDGFVPSEKLRRLEV---EANTLFDCYRELYFEGGTSSVYLWELDGD-----------DFAGCFLIKKKVSGH-EFVTEGCWDSIHVVEVNL-EDNGKAANYKLTTTVILTMDVQKESVGDTNLSGTLTRTAEKRSVIDAEHTHMHNMGTLIEDTETDIRVNMDALYIQKTREVVNNIRSPQTGPSQGAA-------FTASLNEAVKRH 334
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A0H5R7P9_9EUKA (F-actin-capping protein subunit beta (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R7P9_9EUKA) HSP 1 Score: 239 bits (611), Expect = 1.330e-72 Identity = 134/288 (46.53%), Postives = 184/288 (63.89%), Query Frame = 2
Query: 44 STEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEG-PVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHG 904
S E + S LNLMRRLPP E SL GL+NLVP +TDELLQRVDQPL+ ATD TGR ++ C+YNRD SYRSPWSN Y P +EDGFTP D LR++E + N + D YR +YF GGVSSVYLW+ + SFAGCFLI K V + +G G W S HV++ + +Q Y++ +TV++S+ E++ VG+ LSGN+ + +T T D+ H+ N+G MIE +E +R+ ++G+Y+QKTR++ + +R G S R Q+ F L+ V +HG
Sbjct: 27 SDEQLKSALNLMRRLPPSKTETSLSGLINLVPDLTDELLQRVDQPLKLATDTITGRSFVVCDYNRDGDSYRSPWSNVYFPTLEDGFTPSDPLRELEM---ECNAIFDQYRHLYFEGGVSSVYLWDIDVS-----------SFAGCFLIQKDV--ENVKGLKTGTWNSIHVIET--RDRTNSQFEYRLTSTVIVSMIVENDDVGSVDLSGNMTMQDSKTMTLDADNTHISNMGKMIEEIELRVRNSIEGIYIQKTREVFNGIRI--GDSQPRQQASFTENLKEVVIKHG 294
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: D0NIM1_PHYIT (F-actin-capping protein subunit beta n=11 Tax=Phytophthora TaxID=4783 RepID=D0NIM1_PHYIT) HSP 1 Score: 232 bits (591), Expect = 8.140e-70 Identity = 127/293 (43.34%), Postives = 180/293 (61.43%), Query Frame = 2
Query: 56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDG--FTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVV----LSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQ 916
++SCLNLMRR+PP+++E + L LVP + DEL QRVDQPLQ A DP GR+YL C+YNRD SYRSPW+N+YDPP DG F P + LR++E AN + D+YRE+Y+ GG+SSVY+W+ E FA CFL+ K V D G W S HV++V + K +ATY++ T+V+LS+ +G +L G L R+ E T F H+ N+G M+E ME +RS +DGLY+ KTR++++ +R + A + +PF +L AV +HG ++Q
Sbjct: 12 MTSCLNLMRRMPPREVETDVYNLTRLVPSIADELYQRVDQPLQVAVDPANGRKYLLCDYNRDGDSYRSPWTNQYDPPASDGEGFFPSETLRELEVH---ANEIFDSYRELYYQGGISSVYMWDLEL------------GFAACFLVKKDVL-DQRFIEKGEWNSIHVIEVQEGSDVLDKGVKKATYRLTTSVLLSMKVNRPELGDLTLDGTLTRQAERTMEFEDQFAHVSNMGRMVEDMEIDMRSSLDGLYISKTREVINGMRKLQQGPA--MANPFVGELNSAVLKHGQKKQ 286 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig82.17455.1 >prot_Ecto-sp6_S_contig82.17455.1 ID=prot_Ecto-sp6_S_contig82.17455.1|Name=mRNA_Ecto-sp6_S_contig82.17455.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=312bp MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQback to top mRNA from alignment at Ecto-sp6_S_contig82:576816..581491- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig82.17455.1 ID=mRNA_Ecto-sp6_S_contig82.17455.1|Name=mRNA_Ecto-sp6_S_contig82.17455.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4676bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:576816..581491- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:576816..581491- >mRNA_Ecto-sp6_S_contig82.17455.1 ID=mRNA_Ecto-sp6_S_contig82.17455.1|Name=mRNA_Ecto-sp6_S_contig82.17455.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=936bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:576816..581491- (Ectocarpus species6 EcLAC_371)back to top |