mRNA_Ecto-sp6_S_contig82.17455.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig82.17455.1
Unique NamemRNA_Ecto-sp6_S_contig82.17455.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: D7FYI6_ECTSI (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI6_ECTSI)

HSP 1 Score: 590 bits (1520), Expect = 3.510e-210
Identity = 307/311 (98.71%), Postives = 307/311 (98.71%), Query Frame = 2
Query:   35 MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPPS 967
            MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME   EDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSV PEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPPS
Sbjct:    1 MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME---EDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVGPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMSALNAKLGVPPS 308          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A835YY13_9STRA (F-actin-capping protein subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY13_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.650e-89
Identity = 167/314 (53.18%), Postives = 204/314 (64.97%), Query Frame = 2
Query:   47 TEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGA-----------TSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGG--DLMSALNAK 949
            T+ +S+CLNLMRR+PPKDIE +L GL+ L P   DELLQR+DQPLQEATDP TGR+YL CEYNRDA SYRSPWSN YDPP+ED +   D+LRQ+E    DAN LLDAYRE+Y+ GG SSVYLW+ E         G+   FAG FLI K       EG   AWES HV+QV        +ATYK+N+T+MLSV                    TSLSGN+    E+T  F++  DHL N+G MIE MEN +R  +DG+YVQKTRQI+ SVR +  ASA    + F +QL  A+G HGA+R GG    ++ALN K
Sbjct:    2 TDTVSACLNLMRRMPPKDIEVNLTGLVTLAPDCMDELLQRIDQPLQEATDPVTGRQYLLCEYNRDADSYRSPWSNAYDPPLEDAYELRDQLRQLEI---DANELLDAYRELYYQGGTSSVYLWDLEE--------GSGKGFAGAFLIKKSTA----EGT--AWESIHVIQVDPDVGGGKRATYKLNSTIMLSVQXXXXXXXXXXXXXXXXXXXTSLSGNMTSAAEQTLAFASQDDHLSNIGKMIEKMENDVRMSIDGVYVQKTRQILCSVRRSN-ASAPAQGAAFTSQLNQAIGAHGAKRDGGLAAQIAALNFK 297          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A6H5KTN9_9PHAE (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN9_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 1.130e-88
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 2
Query:  353 MLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 784
            MLLDAYREVYFSGGVSSVYLWEEEA+G ADNATGAAGSFAGCFLILKRVGGDGEEGP GAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDP+DEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG
Sbjct:    1 MLLDAYREVYFSGGVSSVYLWEEEAEGGADNATGAAGSFAGCFLILKRVGGDGEEGPAGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPKDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 144          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A6U4L9K2_9STRA (F-actin-capping protein subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L9K2_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.290e-80
Identity = 141/286 (49.30%), Postives = 189/286 (66.08%), Query Frame = 2
Query:   56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARR 913
            I++CL++MRR+PP  IE +L GLLNLVP  TDELLQRVDQPL+E T   +G++YL C+YNRD  SYRSPWSN+YDPP++DGF P ++LR ME     AN L D+YRE+YF GG SSVYLW+ +  G           FAGCFL+ K +   G     G+W S HV++V   +    +A+YK+ TTV+LS D +    G+T LSG+L R+K  T   + +  HL N+G +IE ME  +RS+M+ LYVQKTR+IV+S+RS   A+  + ++ F   L  AV  HG  R
Sbjct:   10 ITACLSIMRRMPPNKIEQNLSGLLNLVPDSTDELLQRVDQPLEEGTCSASGKKYLMCDYNRDGDSYRSPWSNQYDPPLDDGFVPSEQLRNMEIQ---ANELFDSYRELYFEGGTSSVYLWDLDGAG-----------FAGCFLVKKSIESTGVV-KAGSWNSIHVIEVS-EQDGGKKASYKLTTTVLLSADVDKPECGSTDLSGSLTRQKARTCEINAEHTHLSNMGEIIEDMETEMRSNMNALYVQKTREIVNSIRSM--ATGPKQEADFVNSLNAAVMAHGDTR 277          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: F0YCA6_AURAN (F-actin-capping protein subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA6_AURAN)

HSP 1 Score: 257 bits (657), Expect = 8.280e-80
Identity = 146/286 (51.05%), Postives = 186/286 (65.03%), Query Frame = 2
Query:   56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARR 913
            IS  L++MRR+PP  IE++L GLLNLVP+ TDELLQRVDQPL+EAT  E+GR+YL C+YNRD  SYRSPWSN Y+PP++DGF P  +LR +E    +AN L DAYRE+YF GG SSVYLW+ +            G FAGCFLI K V G  E    GAW+S HVV+V  ++    +ATYK+ TTVMLS+D    AVG ++LSG+L R  E+         H+ N+G MIE ME  +R+ +D LY+QKTR++VSS+R             F   L  AV +HG  R
Sbjct:    9 ISCALSIMRRMPPNKIEHNLSGLLNLVPEHTDELLQRVDQPLEEATCAESGRKYLLCDYNRDGDSYRSPWSNAYEPPLDDGFVPSAKLRALEV---EANALFDAYRELYFEGGTSSVYLWDLD------------GGFAGCFLIKKGVSGH-EFVSTGAWDSIHVVEV--AEAGDGRATYKLTTTVMLSMDVHKPAVGDSNLSGSLTRMAEKACAVDEAHPHVANIGSMIEDMETDIRTYLDSLYIQKTREVVSSIRKLHKGPT--QDKGFTMNLNSAVLKHGKNR 274          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A7S2F5N5_9STRA (F-actin-capping protein subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5N5_9STRA)

HSP 1 Score: 254 bits (650), Expect = 9.290e-79
Identity = 151/297 (50.84%), Postives = 196/297 (65.99%), Query Frame = 2
Query:   38 AESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSP-----FAAQLQGAVGQHGARR 913
            A + + I + L++MRR+PP  IE +L GLLNL+P  TDELLQRVDQPLQEAT  +TGR +L C+YNRD  SYRSPWSN+YDPPI+DGFTP + LRQME    DAN L D+YR+ Y+ GG SSVYLW+ + DG           FAGCFLI K V G       G+W+S HVV+V  ++K   QATYK+ +T++LS+     AVG ++LSG + ++KE T   +    H  N+G MIE ME  LRS+MD LY+ KTR+IVSS+R+ R      L++P     F   L  AV  HGA++
Sbjct:    4 AGAEDPIIASLSIMRRMPPNKIEQNLSGLLNLIPDQTDELLQRVDQPLQEATCGQTGRPFLLCDYNRDGDSYRSPWSNQYDPPIDDGFTPSEALRQMEI---DANSLYDSYRDQYYEGGTSSVYLWDLD-DG-----------FAGCFLIKKSVEGHAFVS-AGSWDSIHVVEV--TEKGGGQATYKLTSTLLLSMGVNKAAVGDSNLSGCMTKQKEMTCEVTAVRPHTTNMGTMIEDMEIELRSNMDSLYISKTREIVSSMRNMR------LRAPVQGANFTNSLNQAVLGHGAKK 276          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A7S2BI12_9STRA (F-actin-capping protein subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI12_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.680e-78
Identity = 144/294 (48.98%), Postives = 192/294 (65.31%), Query Frame = 2
Query:   35 MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQ 916
            MA + + I+S L++MRR+PP  IE +L GLLNL+P  TDELLQRVDQPL+EAT   T ++YL C+YNRD  SYRSPWSN Y+P ++DGF P D LR ME    DAN L D+YRE Y+ GGVSSVYLW+ +              FAGCFL+ K V G       G W+S HVV+V  ++K   +ATYK+ +T+ML++  +  +VG ++LSG + ++KE T   +    H+ N+G MIE ME  +RS+MD LY+QKTR+IV+S+R   GA   +    F A L  AV  HGA R+
Sbjct:    1 MASAPDPITSSLSIMRRMPPNKIEQNLSGLLNLIPDQTDELLQRVDQPLEEATCSVTKKKYLLCDYNRDGDSYRSPWSNAYEPALDDGFQPSDALRAMEV---DANTLYDSYREQYYEGGVSSVYLWDLDT------------GFAGCFLVKKTVQGHAFVSD-GGWDSIHVVEV--TEKGDGKATYKLTSTLMLTMGVQKASVGDSNLSGCMTKQKELTLPVTEVKPHIVNIGSMIEDMEIDMRSNMDNLYIQKTREIVNSMRRVTGAP--KQGQNFTANLNAAVAAHGASRK 274          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A7S4A8I8_9STRA (F-actin-capping protein subunit beta n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8I8_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.690e-76
Identity = 138/287 (48.08%), Postives = 187/287 (65.16%), Query Frame = 2
Query:   56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRS-----TRGASAARLQSPFAAQLQGAVGQH 901
            I + L++MRR+PP  I ++L  + NL+P+  DELLQRVDQPL+EA   +TGR YL C+YNRD  S+RSPWSNKYDPPI+DGF P ++LR++E    +AN L D YRE+YF GG SSVYLWE + D            FAGCFLI K+V G  E    G W+S HVV+V L + N   A YK+ TTV+L++D + E+VG T+LSG L R  E+      +  H+ N+G +IE  E  +R +MD LY+QKTR++V+++RS     ++GA+       F A L  AV +H
Sbjct:   71 IEAALSIMRRMPPNKIAHNLNAICNLIPEHADELLQRVDQPLEEAKCKDTGRAYLLCDYNRDGDSHRSPWSNKYDPPIDDGFVPSEKLRRLEV---EANTLFDCYRELYFEGGTSSVYLWELDGD-----------DFAGCFLIKKKVSGH-EFVTEGCWDSIHVVEVNL-EDNGKAANYKLTTTVILTMDVQKESVGDTNLSGTLTRTAEKRSVIDAEHTHMHNMGTLIEDTETDIRVNMDALYIQKTREVVNNIRSPQTGPSQGAA-------FTASLNEAVKRH 334          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: A0A0H5R7P9_9EUKA (F-actin-capping protein subunit beta (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R7P9_9EUKA)

HSP 1 Score: 239 bits (611), Expect = 1.330e-72
Identity = 134/288 (46.53%), Postives = 184/288 (63.89%), Query Frame = 2
Query:   44 STEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEG-PVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHG 904
            S E + S LNLMRRLPP   E SL GL+NLVP +TDELLQRVDQPL+ ATD  TGR ++ C+YNRD  SYRSPWSN Y P +EDGFTP D LR++E    + N + D YR +YF GGVSSVYLW+ +             SFAGCFLI K V  +  +G   G W S HV++     +  +Q  Y++ +TV++S+  E++ VG+  LSGN+  +  +T T   D+ H+ N+G MIE +E  +R+ ++G+Y+QKTR++ + +R   G S  R Q+ F   L+  V +HG
Sbjct:   27 SDEQLKSALNLMRRLPPSKTETSLSGLINLVPDLTDELLQRVDQPLKLATDTITGRSFVVCDYNRDGDSYRSPWSNVYFPTLEDGFTPSDPLRELEM---ECNAIFDQYRHLYFEGGVSSVYLWDIDVS-----------SFAGCFLIQKDV--ENVKGLKTGTWNSIHVIET--RDRTNSQFEYRLTSTVIVSMIVENDDVGSVDLSGNMTMQDSKTMTLDADNTHISNMGKMIEEIELRVRNSIEGIYIQKTREVFNGIRI--GDSQPRQQASFTENLKEVVIKHG 294          
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Match: D0NIM1_PHYIT (F-actin-capping protein subunit beta n=11 Tax=Phytophthora TaxID=4783 RepID=D0NIM1_PHYIT)

HSP 1 Score: 232 bits (591), Expect = 8.140e-70
Identity = 127/293 (43.34%), Postives = 180/293 (61.43%), Query Frame = 2
Query:   56 ISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDG--FTPGDRLRQMEASGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVV----LSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDGLYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQ 916
            ++SCLNLMRR+PP+++E  +  L  LVP + DEL QRVDQPLQ A DP  GR+YL C+YNRD  SYRSPW+N+YDPP  DG  F P + LR++E     AN + D+YRE+Y+ GG+SSVY+W+ E              FA CFL+ K V  D      G W S HV++V     +  K   +ATY++ T+V+LS+      +G  +L G L R+ E T  F     H+ N+G M+E ME  +RS +DGLY+ KTR++++ +R  +   A  + +PF  +L  AV +HG ++Q
Sbjct:   12 MTSCLNLMRRMPPREVETDVYNLTRLVPSIADELYQRVDQPLQVAVDPANGRKYLLCDYNRDGDSYRSPWTNQYDPPASDGEGFFPSETLRELEVH---ANEIFDSYRELYYQGGISSVYMWDLEL------------GFAACFLVKKDVL-DQRFIEKGEWNSIHVIEVQEGSDVLDKGVKKATYRLTTSVLLSMKVNRPELGDLTLDGTLTRQAERTMEFEDQFAHVSNMGRMVEDMEIDMRSSLDGLYISKTREVINGMRKLQQGPA--MANPFVGELNSAVLKHGQKKQ 286          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI6_ECTSI3.510e-21098.71F-actin-capping protein subunit beta n=1 Tax=Ectoc... [more]
A0A835YY13_9STRA1.650e-8953.18F-actin-capping protein subunit beta n=1 Tax=Tribo... [more]
A0A6H5KTN9_9PHAE1.130e-8897.22F-actin-capping protein subunit beta n=1 Tax=Ectoc... [more]
A0A6U4L9K2_9STRA2.290e-8049.30F-actin-capping protein subunit beta n=1 Tax=Phaeo... [more]
F0YCA6_AURAN8.280e-8051.05F-actin-capping protein subunit beta n=1 Tax=Aureo... [more]
A0A7S2F5N5_9STRA9.290e-7950.84F-actin-capping protein subunit beta n=1 Tax=Dicty... [more]
A0A7S2BI12_9STRA1.680e-7848.98F-actin-capping protein subunit beta n=1 Tax=Flore... [more]
A0A7S4A8I8_9STRA1.690e-7648.08F-actin-capping protein subunit beta n=2 Tax=Pelag... [more]
A0A0H5R7P9_9EUKA1.330e-7246.53F-actin-capping protein subunit beta (Fragment) n=... [more]
D0NIM1_PHYIT8.140e-7043.34F-actin-capping protein subunit beta n=11 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:576816..581491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score596.7
Seed ortholog evalue6.4e-168
Seed eggNOG ortholog2880.D7FYI6
Model size1331
KEGG koko:K10365
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005884,GO:0006950,GO:0006996,GO:0007010,GO:0007015,GO:0008064,GO:0008092,GO:0008150,GO:0008290,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009987,GO:0010639,GO:0015629,GO:0016043,GO:0030029,GO:0030036,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030837,GO:0031333,GO:0032271,GO:0032272,GO:0032502,GO:0032535,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043244,GO:0043254,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051015,GO:0051016,GO:0051128,GO:0051129,GO:0051493,GO:0051494,GO:0051693,GO:0065007,GO:0065008,GO:0071840,GO:0090066,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0110053,GO:1901879,GO:1901880,GO:1902903,GO:1902904
Exons6
EggNOG free text desc.barbed-end actin filament capping
EggNOG OGsKOG3174@1,KOG3174@2759
Ec32 ortholog descriptionF-actin-capping protein subunit beta
Ec32 orthologEc-23_003050.1
Cds size936
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17455.1prot_Ecto-sp6_S_contig82.17455.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig82 577177..581457 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350458.186798-UTR-Ecto-sp6_S_contig82:576815..5771761682350458.186798-UTR-Ecto-sp6_S_contig82:576815..577176Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig82 576816..577176 -
1682350458.2557826-UTR-Ecto-sp6_S_contig82:581457..5814911682350458.2557826-UTR-Ecto-sp6_S_contig82:581457..581491Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig82 581458..581491 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350458.1975355-CDS-Ecto-sp6_S_contig82:577176..5773641682350458.1975355-CDS-Ecto-sp6_S_contig82:577176..577364Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 577177..577364 -
1682350458.2072113-CDS-Ecto-sp6_S_contig82:577742..5779141682350458.2072113-CDS-Ecto-sp6_S_contig82:577742..577914Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 577743..577914 -
1682350458.217302-CDS-Ecto-sp6_S_contig82:578950..5790041682350458.217302-CDS-Ecto-sp6_S_contig82:578950..579004Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 578951..579004 -
1682350458.227536-CDS-Ecto-sp6_S_contig82:579608..5798241682350458.227536-CDS-Ecto-sp6_S_contig82:579608..579824Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 579609..579824 -
1682350458.2372255-CDS-Ecto-sp6_S_contig82:580220..5803851682350458.2372255-CDS-Ecto-sp6_S_contig82:580220..580385Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 580221..580385 -
1682350458.2468646-CDS-Ecto-sp6_S_contig82:581316..5814571682350458.2468646-CDS-Ecto-sp6_S_contig82:581316..581457Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 581317..581457 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig82.17455.1

>prot_Ecto-sp6_S_contig82.17455.1 ID=prot_Ecto-sp6_S_contig82.17455.1|Name=mRNA_Ecto-sp6_S_contig82.17455.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=312bp
MAESTEVISSCLNLMRRLPPKDIENSLEGLLNLVPQVTDELLQRVDQPLQ
EATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEA
SGEDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFL
ILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPE
DEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG
LYVQKTRQIVSSVRSTRGASAARLQSPFAAQLQGAVGQHGARRQGGDLMS
ALNAKLGVPPS*
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mRNA from alignment at Ecto-sp6_S_contig82:576816..581491-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig82.17455.1 ID=mRNA_Ecto-sp6_S_contig82.17455.1|Name=mRNA_Ecto-sp6_S_contig82.17455.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4676bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:576816..581491- (Ectocarpus species6 EcLAC_371)
CAGAGCAGAGCACAGCAGCCCACCGGCTACAAGGATGGCGGAGTCTACGG AAGTGATCTCGTCCTGCCTGAACCTCATGCGGCGACTGCCGCCGAAGGAC ATCGAGAACAGCCTAGAGGGACTCCTGAACCTCGTCCCGCAAGTTACGGA TGAACTCCTGCAACGGGTCGATCAGGTACCGTAAGCCTAGACCAGGAGCG CAGCAGTGCCACGTTCAGCGCGCACAACAGTCGACGCATCGAGCATCAGG AAAGCATAGATATCGAGTGATTTGCTCGAAGTTCAACCGGTCGTTGTTGC ACCACACACACACCGTCGAAATGCCTACTGCTGCTGTACCTGGAAATGTT CTCAAAGTTGTTTGATCAAGTGAGGAAGAGGCAAAGACACGCCCTCTCAC CTCCCCAGCCCTGGAGCCGGCCGGGCATCGGGGTTGCACCGCCGCTTGAC ACTCGTGGATATTATGACAAAAGCTGTAGAGACGAAACCAGTGCCGATGG TCGAAGAAAGGCCCTTTGCTATCGATGGATGACTGCACTTTCTCAGTCTG AAGCCTCTCACACAGAGCAGTTACAGCACGAGCAGGCGGGCACCGCAGGC TTGAAACTGCTGCGGGGAGGGTGTGCATAGTACAACAAGCGTCACCGGTA TGAACCATTTCCAAATATGAACCACTTCCAAATGGCCCATTTCTCTATGA GGCAATCCACATATCGCTGTCCTGTGATGTACATTCCACCCCCACCCCCC CCTCCCCTTACGTTTGTGCGAAACAATATATATGAAACAGGTGTAGTCAA CGTCCGTCGTAACATTGGTGCTCACCCACGTATCGCTGAAAAATTGGCAG CAGTACTTAGGCAGAACACAGGAACAGGTCTCATTGAGGGATCTGCATGC TCCTTGTAAACCTCGTGTTATCACTGAGGCATCTGCTCATACTTCCATGG CACCACTCTCTCAACCCTTATCCTCGTTCTTGACAAGATCCCCTTCCCGC ACGCCCCGCTATCAACCGCTCCGAGACGCAACGGTTTTTTATTTGGAGCC GACAACAGCAACAACAAGACCAACGCAACGAACACCCCCCCCCGCCCCGC TGCCAGCCGCTTCAAGAAGCGACAGACCCAGAGACCGGTCGACGCTACCT GCGGTGCGAGTACAACCGTGACGCAAGCTCCTACCGCAGCCCGTGGAGCA ACAAGTACGACCCGCCCATCGAGGACGGTTTCACTCCCGGGGATCGCCTG AGACAGATGGAGGCGAGCGGCGTGTTTACGTGCAGGGGGGACTCGGGGCA GGGGTGGTGTGATGAATGCACAGATTTATGGAGAGTCCTTGGTGTTGCAG ATCATTCGTAGGAGAAATCTTGCCTGCGCATGAGGAGTGTGTGTATTCGT CGTCGTGCTTGGGGCATTGCTTGTCCGATGCGCTCTCGTGTTGGCGAACA GGTTTGTATGAGTCTTGCGGCGTTTGCCTGAGAACACCCGGCTGGGCTAT TTAGGCATCGGCCAAGACTAACCGTATGTTCATCACGGCCTCCCCCTCTC CCAAATCCGTCTCCATTGACATGGCTGTCCTTTTGAGCCTCCCTCCCTCC CTCCTCCACCCCTCTCCTCTCTCCCGTCCTGCCCCCCCGTTCTCACCCCT CTCCTCCTGCACTGCAGGAAGACGCCAACATGCTCCTGGACGCTTACCGC GAGGTGTACTTCTCCGGGGGGGTGAGCTCCGTGTACCTGTGGGAGGAGGA GGCGGACGGCGAGGCCGACAACGCCACGGGGGCTGCGGGGAGCTTCGCGG GGTGCTTCTTGATCCTGAAGCGCGTCGGCGGGGACGGGGAGGAGGGGCCG GTAGGGGCCTGGGAGAGCTCGCACGTTGTCCAGGTACGCCTAGGCAGTTC GTTACGGTGAAGAGGTCTGTTGCGCGCGCCCCTTCCCCGGCCCTTCTCGT CTTCGGTTTATTTCGGGTGAACACCTTGGCACAACCAAGTTGACTGACAC AAGTATGGGTAGGGAAACGTGTTCAAACGTGACTCCGACTTTTGAGGATG GCGACACGGTTTCGAGACGCTGTGGCCTATCGTTGGTTCCTCTGGCGGGA GGAAAGCACCCTCGTGTAGGCGTTTTTGGTTTTGGCTGCCTCAGGAGCGT GCTCTTCTGTTGCGTTAGACGGCGACCGGTTGCGTGCGATACACTTTAGC GCGCCCGCTGAAGAACCTCTATTATAGTTTTGGCAGAGGCTGTGGTTCTC ACTGTATTCCTAGGGTTATGCTACGAATGGCCGCTATATAGGTTTTTGTG TAGGGGGTTCTGAACTGAGCTCACGACTAGTGCTCAAGTTCTGAGGCTTT GAGTTTGACGACGACCAAATTCTTCGCTAATGCCAAGTTGTCGAGTGTGG GTTCAATGAGACTGTTACCCGCTACGTGTGCCCGAAAAATCACACTTGGG CACCACGGTGTCGATGAAACCCCTTGTTCTCACGCAGGTCGTGTTGAGCA AGAAGAATCCGACGCAAGCGACGTACAAGGTCAACACCACGGTGAGCTTT GCTGAGCTTCGGGGAAAGGTGCTCACCCACCGACCGCCGTGTAAAGCAAG TGCTTGGCGAAACAACATTAGTGCATTCCGTGTATCACACGGCGTTTTAA CCCCGCGGTGATACGAGGTATAGTTGCTACGAGAGAGGGTGATTCGCTCA CCTTTTGCTTGCCAAATCTTCTGCATGCCTCTCATGGTAGTGTTGAGCGA TCACACTAGTTTCGTGTGAGGCAGGAGGGCAAGTTCTCTCGCGCGTGACG CTGAACCGGTCGGCGCTACAACATTGCTGCTGCTGCTGTTGTCCGACGTC CTTTTTTTAGAAAGTAAACGAGTAGTATTTACACCCCCGCGTGATATTCC TGTTCGGCGTTGGTTCTGGCCCGATTTTTAGAAAGTAAACATAACCTCAC AGAAAGACTACCCGTTCGAGATATAACCTCAGTCGAAAGGGTTGTGGTGA AGTCTTCTCAGTAAGTGGATTGAAACCGACTGGAGACTGGGCTTATTTTG AGTTTGTGTAAGCCTATACACTGAGTTATATCAGTGATGCCAGTTGGTGC TAAGAGCAAAAGCATCTGTATAGGCGGATACATTCTTTAACACATCCCGT TCAGTTTTCTACTGGGTCGACGACAGAACTATCGGTGAGAAGCTCTCCGT TTTGTCGTGTGTTGTAGAATGTGGCCTTCACAGGGAACATGGCGCAGTGT CGTTTGACATGTGCCTTTTGTTCCAAACGACGCATAGTCGACTAACAGGC GTTACGTGACTTGACCCGAACCCTACAACCCATTCATTTTATTTTACGAA ATTTGCTTAGTAACAGCCTCCCAAACGACGACAAAATATGCGGGGAAGTG TTTGTTTGATGTGGACCGCCCAAATACGCCCGTACCACCTGCCTCAGGAT GAGCTAACCGCTCTCTTGAGCTTTCCCCTTCTCATCCCAAACCACCCGAT GTATGAAAAGCCACGACCTCTATCCATCACGTATCATCATCGTGCTGCTG CTGCTGCTGCTGCTGCTACGTGTGCAGGTGATGCTGTCGGTGGACCCGGA GGACGAGGCCGTCGGGGCGACCAGCCTCTCGGGCAACCTGGCTAGGGAAA AGGAGGAGACCAAGACCTTCTCGACGGACAGCGACCACCTCCAAAACCTG GGCGTGATGATCGAGGCGATGGAGAACACGCTCAGGAGCGACATGGACGG TAGGAGCCGAGTCAGTCTACCACCGCATCTCAGGACGAAGTGATTTCTTC AACCCACTTTTCAGAAAGAGTTTTGCACGTTACGGCAGGGGATTCTTGCC CTGCTTTTCGGGTATGTATGCATCGTATGCAACTACATCGCGTATTTCCG TCTAGGTATATTGCAGCCTGTCACTTTCTCAAGCAGACTCGTAATTCTTT TTGCCCGCCCGGAACGCACCCCCCCTCGAGCCACCTTTGGCAAACTAGAT GGGAAGGAACGATTGCCCATCAGTCATCAGTCCTGTGCGAACAATGCTCC ATCCTCTCGAGGACGCGTGGTCAATGGTCTAATTGCTAAGGCATGCAAAC ATAAGAGTACCCCCCCCCCGTCTGCAGGCCTGTACGTGCAGAAAACCAGA CAGATCGTCAGCAGCGTGAGAAGCACCCGAGGGGCTTCGGCTGCCCGCCT GCAGAGCCCGTTCGCCGCTCAGCTACAGGGGGCGGTCGGGCAGCACGGGG CGAGGCGTCAAGGTGGCGACCTGATGAGCGCCCTCAACGCCAAGCTTGGG GTACCGCCGTCGTGATGTGCGTCGTTTTTGCATGTGTACTGCAAGCGGTG CGGATAGCCGACGACGGACCGTGTGCAAGCTGGTGTTTGTTTTGGTTTTC GTGCCTTCTTGTTGGTTACTCATGTAGTCCCCTGGGCTCAGCTAGATCGA ATTTAGTGTTTGTTTGGTTTCCGTGACTTTCTCCCCTGCTCGTTGGTTTC CCTGGGTTGGGCAAGATCGTCTGCTGCTGGGTGTAGCCTGGGCGTGTAGT CTAGCCGTGTCATGGGCGCTCGAACCTTGTCTCCGAGGGCTGAGCAAGAC CGTGAGTGTAGCCAAGGGGTGTAAGCTGGTCGTATCGTGAATGCTCGGAC CGTGCTTAATCTCTTGGTTCCTTGAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:576816..581491-

>mRNA_Ecto-sp6_S_contig82.17455.1 ID=mRNA_Ecto-sp6_S_contig82.17455.1|Name=mRNA_Ecto-sp6_S_contig82.17455.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=936bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:576816..581491- (Ectocarpus species6 EcLAC_371)
ATGGCGGAGTCTACGGAAGTGATCTCGTCCTGCCTGAACCTCATGCGGCG
ACTGCCGCCGAAGGACATCGAGAACAGCCTAGAGGGACTCCTGAACCTCG
TCCCGCAAGTTACGGATGAACTCCTGCAACGGGTCGATCAGCCGCTTCAA
GAAGCGACAGACCCAGAGACCGGTCGACGCTACCTGCGGTGCGAGTACAA
CCGTGACGCAAGCTCCTACCGCAGCCCGTGGAGCAACAAGTACGACCCGC
CCATCGAGGACGGTTTCACTCCCGGGGATCGCCTGAGACAGATGGAGGCG
AGCGGCGAAGACGCCAACATGCTCCTGGACGCTTACCGCGAGGTGTACTT
CTCCGGGGGGGTGAGCTCCGTGTACCTGTGGGAGGAGGAGGCGGACGGCG
AGGCCGACAACGCCACGGGGGCTGCGGGGAGCTTCGCGGGGTGCTTCTTG
ATCCTGAAGCGCGTCGGCGGGGACGGGGAGGAGGGGCCGGTAGGGGCCTG
GGAGAGCTCGCACGTTGTCCAGGTCGTGTTGAGCAAGAAGAATCCGACGC
AAGCGACGTACAAGGTCAACACCACGGTGATGCTGTCGGTGGACCCGGAG
GACGAGGCCGTCGGGGCGACCAGCCTCTCGGGCAACCTGGCTAGGGAAAA
GGAGGAGACCAAGACCTTCTCGACGGACAGCGACCACCTCCAAAACCTGG
GCGTGATGATCGAGGCGATGGAGAACACGCTCAGGAGCGACATGGACGGC
CTGTACGTGCAGAAAACCAGACAGATCGTCAGCAGCGTGAGAAGCACCCG
AGGGGCTTCGGCTGCCCGCCTGCAGAGCCCGTTCGCCGCTCAGCTACAGG
GGGCGGTCGGGCAGCACGGGGCGAGGCGTCAAGGTGGCGACCTGATGAGC
GCCCTCAACGCCAAGCTTGGGGTACCGCCGTCGTGA
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