prot_Ecto-sp6_S_contig103.912.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig103.912.1
Unique Nameprot_Ecto-sp6_S_contig103.912.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length188
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: D7G0T3_ECTSI (Retinoblastoma binding protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T3_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 2.240e-127
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 0
Query:    1 RVCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLERESTTGRSVRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVEEGDPE 188
            RVCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLERESTTGRSVRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPF+AAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVEEGDPE
Sbjct:  206 RVCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLERESTTGRSVRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFLAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVEEGDPE 393          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: A0A6H5KX51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX51_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 2.680e-107
Identity = 166/188 (88.30%), Postives = 169/188 (89.89%), Query Frame = 0
Query:    1 RVCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLERESTTGRSVRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVEEGDPE 188
            RVCLGTCQGQVLSV                   KQ+DLSRDGKWMLVNGGERVIRMLERESTTGRSVRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPF+AAALT+GKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVEEGDPE
Sbjct:   97 RVCLGTCQGQVLSV-------------------KQIDLSRDGKWMLVNGGERVIRMLERESTTGRSVRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFLAAALTSGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVEEGDPE 265          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: A0A2K3P7C1_TRIPR (Retinoblastoma-binding protein 5-like n=3 Tax=Trifolium TaxID=3898 RepID=A0A2K3P7C1_TRIPR)

HSP 1 Score: 149 bits (377), Expect = 2.780e-39
Identity = 82/212 (38.68%), Postives = 120/212 (56.60%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLER---------------ESTTGRS---------------VRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVE 183
            V +G  +G++L + +KDG+V A + ++G + VK +  SR+G+++L N  +RVIR+ E                ES +  +                R+FQD + +  W+   F+GD E++ GGS ++G   IY+W   GHLV  LEGP   L+ L  HPVRP + +   NG V +W      NW+AFA DF+ELEEN EYVE+EDEFD+V E
Sbjct:  165 VYVGNSKGEILVIDSKDGEVRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEIRALNELNESLSNLNGVEKLTALGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVIGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLVPE 376          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: V7B623_PHAVU (Uncharacterized protein n=19 Tax=Phaseoleae TaxID=163735 RepID=V7B623_PHAVU)

HSP 1 Score: 147 bits (370), Expect = 3.570e-38
Identity = 81/212 (38.21%), Postives = 119/212 (56.13%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRM------LERESTTGRSV------------------------RDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVE 183
            V LG  +G++L +  K+G+V A + + G + VK +  SR+G+++L N  +RVIR+      L+ E+ T   +                        R+FQD + +  W+   F+GD E++ GGS ++G   IY+W   GHLV  LEGP   L+ L  HPV PF+ +   NG V +W      NW+AFA DF+ELEEN EYVE+EDEFD++ E
Sbjct:  188 VYLGNSKGEILVIDYKNGEVRAVVPITGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPLKEEARTLDDLNKNFGDLNNSEKLKAIGSKCLILFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVHPFVVSVSLNGFVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPE 399          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: A0A072TPD3_MEDTR (Retinoblastoma-binding-like protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072TPD3_MEDTR)

HSP 1 Score: 145 bits (365), Expect = 3.600e-38
Identity = 78/209 (37.32%), Postives = 117/209 (55.98%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRM--------------------------LERESTTGRSV----RDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDV 180
            V +G  +G++L + +KDG+V A + ++G + VK +  SR+G+++L N  +RVIR+                          +E+    G       R+FQD + +  W+   F+GD E++ GGS ++G   IY+W   GHLV  LEGP   L+ L  HPVRP + +    G V +W    I NW+AFA DF+E+EEN EYVE+EDEFD+
Sbjct:  188 VYVGNSKGEILVIDSKDGEVHAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEVRALAELNENLGDLNGVEKLKAAGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLCGIVYIWAKEYIENWSAFAPDFKEIEENEEYVEREDEFDL 396          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: A0A0B2R2G4_GLYSO (Retinoblastoma-binding protein 5 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A0B2R2G4_GLYSO)

HSP 1 Score: 144 bits (364), Expect = 6.160e-38
Identity = 78/212 (36.79%), Postives = 117/212 (55.19%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLER-----------ESTTGRS-------------------VRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVE 183
            V +G  +G++L +  K+GDV A + ++G + VK +  SR+G+++L N  +R+IR+ E            +  +G                      R+FQD + +  W+   F+GD E++ GGS ++G   IY+W   GHLV  LEGP   L+ L  HPV P + +   NG V +W      NW+AFA DF+ELEEN EYVE+EDEFD++ E
Sbjct:   85 VYVGNSKGEILVIDYKNGDVHAVVPISGGSVVKNIVFSRNGQYLLTNSNDRIIRIYENLLPLKDEVRALDDLSGNHNDLNNIENLKAVGSKCLTLFREFQDSITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVHPIVVSVSLNGLVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPE 296          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: A0A444Y233_ARAHY (Uncharacterized protein n=7 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444Y233_ARAHY)

HSP 1 Score: 147 bits (370), Expect = 6.900e-38
Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLERESTTGRSVR------------------------------DFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVE 183
            V +G  +G++L +  KDG+V A + ++G + VK +  SR+G+++L N  +RVIR+ E        VR                              +FQD + +  W+   F+GD E++ GGS ++G   IY+W   GHLV  LEGP   L+ L  HPVRP + +   NG V +W      NW+AFA DF+ELEEN EYVE+EDEFD++ E
Sbjct:  253 VYVGNSKGEILVIDHKDGEVRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPLKEEVRALDDLNKNFNDLDGVEKLKAVGTKCLTLFREFQDSITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRVGHLVKFLEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPE 464          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: Q1S5M0_MEDTR (Putative transcription factor WD40-like family n=3 Tax=Medicago truncatula TaxID=3880 RepID=Q1S5M0_MEDTR)

HSP 1 Score: 146 bits (368), Expect = 7.120e-38
Identity = 78/209 (37.32%), Postives = 117/209 (55.98%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRM--------------------------LERESTTGRSV----RDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDV 180
            V +G  +G++L +  KDG+V A + ++G + VK +  SR+G+++L N  +RVIR+                          +E+    G       R+FQD + +  W+   F+GD E++ GGS ++G   IY+W   GHLV  LEGP   L+ L  HPVRP + +   +G V +W    I NW+AFA DF+E+EEN EYVE+EDEFD+
Sbjct:  188 VYVGNSKGEILVIDNKDGEVRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEVRALAELNENLSDLNGVEKLKAAGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLSGIVYIWAKDYIENWSAFAPDFKEIEENEEYVEREDEFDL 396          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: A0A5K1GPX1_9MAGN (Uncharacterized protein (Fragment) n=4 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1GPX1_9MAGN)

HSP 1 Score: 141 bits (355), Expect = 2.960e-37
Identity = 76/212 (35.85%), Postives = 118/212 (55.66%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRMLE-----RESTTGRS-------------------------VRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVE 183
            + +G  +G++L +GT D +V A ++V G + +K +  SR+G+++L+N  +R IR+ E     RE++                              R+FQD + R +W+   F+GD E++ G S ++G   IY+W   GH V  LEGP   L  L  HP++P +A+   +G V +W      NW+AFA DF+ELEEN EYVE+EDEFD++ E
Sbjct:  148 IYVGNSKGEILVMGTNDRNVKAVVSVPGGSVIKNIVFSRNGQYLLINSNDRAIRVFENHLPQREASKALDEISESFEELQYGEKLKWLGTKCLTFFREFQDSITRIQWKVPCFSGDGEWVVGASASKGEHKIYIWARSGHFVKMLEGPKEALTDLAWHPLQPLVASVSMSGLVYIWAKDHTENWSAFAPDFKELEENEEYVEREDEFDLMPE 359          
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Match: A0A1J7H551_LUPAN (Uncharacterized protein n=2 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A1J7H551_LUPAN)

HSP 1 Score: 144 bits (363), Expect = 3.110e-37
Identity = 78/212 (36.79%), Postives = 120/212 (56.60%), Query Frame = 0
Query:    2 VCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGGERVIRM--------------------------LERESTTGRS----VRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGTCSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTTPIANWTAFAADFEELEENVEYVEKEDEFDVVVE 183
            V +G+ +G++L +  KDG+V A + ++G + VK +  SR+G+++L+N  +R IR+                          +E+    G      +R+ QD +NR +W+   F+GDSE++ GGS ++G   I++W   GHLV  LEGP   L+ L  HPV P + +   NG + +W      NW+AFA DF ELEEN EYVE+EDEFD++ E
Sbjct:  174 VYVGSSKGEILIIDYKDGEVRAMVPISGGSVVKSILFSRNGQYLLINSNDRTIRIYENILPLKDEVRALNELGENFNDLNGVEKFKAVGSKCLTLLREIQDTINRVQWKAPCFSGDSEWVVGGSASKGEHKIHIWDRAGHLVKILEGPKEALIDLAWHPVYPLVLSVSLNGIIYIWAKDYTENWSAFAPDFIELEENEEYVEREDEFDLIPE 385          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0T3_ECTSI2.240e-12799.47Retinoblastoma binding protein 5 n=1 Tax=Ectocarpu... [more]
A0A6H5KX51_9PHAE2.680e-10788.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2K3P7C1_TRIPR2.780e-3938.68Retinoblastoma-binding protein 5-like n=3 Tax=Trif... [more]
V7B623_PHAVU3.570e-3838.21Uncharacterized protein n=19 Tax=Phaseoleae TaxID=... [more]
A0A072TPD3_MEDTR3.600e-3837.32Retinoblastoma-binding-like protein n=1 Tax=Medica... [more]
A0A0B2R2G4_GLYSO6.160e-3836.79Retinoblastoma-binding protein 5 n=1 Tax=Glycine s... [more]
A0A444Y233_ARAHY6.900e-3837.74Uncharacterized protein n=7 Tax=Arachis hypogaea T... [more]
Q1S5M0_MEDTR7.120e-3837.32Putative transcription factor WD40-like family n=3... [more]
A0A5K1GPX1_9MAGN2.960e-3735.85Uncharacterized protein (Fragment) n=4 Tax=Nymphae... [more]
A0A1J7H551_LUPAN3.110e-3736.79Uncharacterized protein n=2 Tax=Lupinus angustifol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..149
e-value: 1.8E-10
score: 42.1
IPR037850Retinoblastoma-binding protein 5/Swd1PANTHERPTHR44040FAMILY NOT NAMEDcoord: 2..184
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig103contigEcto-sp6_S_contig103:306283..311102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig103.912.1mRNA_Ecto-sp6_S_contig103.912.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig103 306283..311102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig103.912.1 ID=prot_Ecto-sp6_S_contig103.912.1|Name=mRNA_Ecto-sp6_S_contig103.912.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=188bp
RVCLGTCQGQVLSVGTKDGDVSASMTVAGCAKVKQMDLSRDGKWMLVNGG
ERVIRMLERESTTGRSVRDFQDVVNRTRWQCCRFTGDSEYIAGGSRAEGT
CSIYLWTIEGHLVTRLEGPNLGLLSLTRHPVRPFMAAALTNGKVQLWGTT
PIANWTAFAADFEELEENVEYVEKEDEFDVVVEEGDPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037850RBBP5/Swd1
IPR036322WD40_repeat_dom_sf