mRNA_Ecto-sp6_S_contig103.891.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.891.1 vs. uniprot
Match: D7FXV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV5_ECTSI) HSP 1 Score: 341 bits (874), Expect = 6.950e-115 Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 3 Query: 42 MKTRHSALVMFIVASWAGLAQSWGGGRRAEDKTHTLAWEAFSADMGRGDCTMDSLSEQASVTLPIGQTVTKDEYRLACENSMEDTTVGETSLHDGKLVSIDRVSFSVEAMVTAKATSLKTGFQQDVSYPAAFFMTIDLRTNKLAEVRMYAQNIALLAARGYTMIPSSSYGPVIRPV 569
MKTRHSALV+FIVASW GLAQSWGGGRRAEDKTHTLAWEAFSADMGRGDCTMDSLSEQASVTLPIGQTVTKDEYRLACENSM DTTVGETSLHDGKLVSIDRV+FSVEAMVTAKATSLKTGFQQDVSYPAAFFMTIDLRTNKLAEVRMYAQNIALLAARGYTMIPSSSYGPVIRPV
Sbjct: 1 MKTRHSALVIFIVASWVGLAQSWGGGRRAEDKTHTLAWEAFSADMGRGDCTMDSLSEQASVTLPIGQTVTKDEYRLACENSMGDTTVGETSLHDGKLVSIDRVNFSVEAMVTAKATSLKTGFQQDVSYPAAFFMTIDLRTNKLAEVRMYAQNIALLAARGYTMIPSSSYGPVIRPV 176 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.891.1 >prot_Ecto-sp6_S_contig103.891.1 ID=prot_Ecto-sp6_S_contig103.891.1|Name=mRNA_Ecto-sp6_S_contig103.891.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=177bp MKTRHSALVMFIVASWAGLAQSWGGGRRAEDKTHTLAWEAFSADMGRGDCback to top mRNA from alignment at Ecto-sp6_S_contig103:124225..131529+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.891.1 ID=mRNA_Ecto-sp6_S_contig103.891.1|Name=mRNA_Ecto-sp6_S_contig103.891.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7305bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:124225..131529+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:124225..131529+ >mRNA_Ecto-sp6_S_contig103.891.1 ID=mRNA_Ecto-sp6_S_contig103.891.1|Name=mRNA_Ecto-sp6_S_contig103.891.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=531bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:124225..131529+ (Ectocarpus species6 EcLAC_371)back to top |