prot_Ecto-sp6_S_contig103.890.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig103.890.1
Unique Nameprot_Ecto-sp6_S_contig103.890.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length166
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 1.820e-116
Identity = 157/165 (95.15%), Postives = 161/165 (97.58%), Query Frame = 0
Query:    1 MGGAQSSESTGTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            MGGAQS+ES GTPFVP KILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGD AKIREA+K+NKEACLCLLNYKKDGSTFHNQFFLTPLFDE GTLAYFLGIQVQVKTASDGQEPENPGW+YTMGLHA
Sbjct:    1 MGGAQSAESAGTPFVPNKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDTAKIREAIKENKEACLCLLNYKKDGSTFHNQFFLTPLFDEGGTLAYFLGIQVQVKTASDGQEPENPGWVYTMGLHA 165          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 3.140e-108
Identity = 145/165 (87.88%), Postives = 155/165 (93.94%), Query Frame = 0
Query:    1 MGGAQSSESTGTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            MGGAQS+E +GTPF P K+LSVKDTILVDMMNGP+NSR+VSYCVTDPDLEDNPIIFCSDGFAEFTGYAK+EVEGRNCRFLQGAKTDPGDI KIREAVK+ KEACLCLLNYKKDGS FHNQFFLTPLFD  G LAY+LGIQVQVKT +DGQEPENPGW+YTMGLHA
Sbjct:    1 MGGAQSAEPSGTPFKPAKLLSVKDTILVDMMNGPNNSRIVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKDEVEGRNCRFLQGAKTDPGDITKIREAVKEKKEACLCLLNYKKDGSIFHNQFFLTPLFDAEGKLAYYLGIQVQVKTGADGQEPENPGWVYTMGLHA 165          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 1.170e-106
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 0
Query:    1 MGGAQSSEST---GTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            MGGAQS+E+T   GTPF P+K+LSVKDTILVDMMNGP+NS+VVSYCVTDPDLEDNPIIFCSDGFA+FTGYAKEEVEGRNCRFLQGAKTDPGD+ KIREAV + KEACLCLLNYKKDGSTFHNQFFLTP+FD  GTLAYFLGIQVQVKTA+ GQEP NPGWIYTMGLHA
Sbjct:    1 MGGAQSAETTPTSGTPFKPSKLLSVKDTILVDMMNGPENSKVVSYCVTDPDLEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQVQVKTAAPGQEPANPGWIYTMGLHA 168          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 9.530e-99
Identity = 136/166 (81.93%), Postives = 148/166 (89.16%), Query Frame = 0
Query:    3 GAQSSEST---GTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            GA+ S ST   GTPFVP K+LSVKDTILVDM++GPD+S+ +SYCVTDPDL DNPIIFCSDGFA FTGY KEEVEGRNCRFLQGAKTDPGD+AKIR AV + +EACLCLLNYKKDGSTF+NQFFLTPLFD  GTLAYFLGIQVQVKT   GQEPENPGW+YTMGLHA
Sbjct:    2 GAEQSASTEPLGTPFVPRKLLSVKDTILVDMLSGPDHSKNISYCVTDPDLHDNPIIFCSDGFASFTGYDKEEVEGRNCRFLQGAKTDPGDVAKIRSAVSEKREACLCLLNYKKDGSTFNNQFFLTPLFDAEGTLAYFLGIQVQVKTGDKGQEPENPGWVYTMGLHA 167          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS)

HSP 1 Score: 253 bits (646), Expect = 5.960e-84
Identity = 119/166 (71.69%), Postives = 140/166 (84.34%), Query Frame = 0
Query:    1 MGGAQSSEST--GTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEP-ENPGWIYTMGL 163
            MG  QSS S   GTPFVP K LSVKD I+VDM+NGPD+S+ + YCV+DPDL DNPIIFCSDGF+E  GY +EEVEGRNCRFLQGAKTDPGDIA+IR+A+K+NKEACLCL+NYKKDGS F+NQF+L PLFD  G LAYFLGIQV+V+T  D Q+P +N GW++TM L
Sbjct:    1 MGAEQSSSSDLLGTPFVPKKQLSVKDVIIVDMLNGPDHSKTLCYCVSDPDLGDNPIIFCSDGFSELVGYTREEVEGRNCRFLQGAKTDPGDIAEIRDAIKENKEACLCLINYKKDGSAFNNQFYLVPLFDAGGQLAYFLGIQVEVETLDDEQQPPKNLGWLHTMCL 166          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.740e-58
Identity = 88/165 (53.33%), Postives = 114/165 (69.09%), Query Frame = 0
Query:    1 MGGAQSSESTGTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            +GG+     +   FV  K LS +D  +VDM+N   +  V S+C+ DPD ED PI+F SDGF  FTGYA  E+EGRNCRFLQG  T+  D+ KIR A+K  KE  + LLNYKKDG++F+N+FFL+PL++E G LAY++G+Q  VK    GQ P NPGW+Y  GLHA
Sbjct:   53 IGGSDLPAPSQRQFVAKKELSERDATIVDMLNSAGHEDV-SFCLCDPDQEDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQCSVKKLGPGQAPANPGWVYAQGLHA 216          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.940e-56
Identity = 86/153 (56.21%), Postives = 110/153 (71.90%), Query Frame = 0
Query:   14 FVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEA-GTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            F P+K L  KD ILVDM+N  D   +  + VTDPDLEDNPI+F S+GF+ +TGYAK E+EGRNCRFLQG +T+P D+  IR A+    +A +CLLNY+KDG+ F NQFF+ PL D A G +AY+LG+Q  V+    GQ  +N GW+Y MGLHA
Sbjct:   26 FEPSKELKPKDMILVDMLNSRDEPDIC-WVVTDPDLEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQAAVRQKEGGQTQKNAGWVYQMGLHA 177          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A126WWA7_9STRA (Putative LOV domain-containing protein n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A126WWA7_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.140e-55
Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 0
Query:   14 FVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLH 164
            F+  K L  KD I+VDM+ G + ++ V Y VTDPDL+DNPI+F S+GF ++TGY K E+EGRNCRFLQGA TDP DI+ IR+A+++  +  +C+ NY K+G  F NQFF+ PL DE   LAYFLG+QV V   + GQ+ ENPGWIYTMG H
Sbjct:   50 FISQKKLCPKDQIVVDML-GMNENKNVCYLVTDPDLDDNPIVFTSEGFCKYTGYEKNEIEGRNCRFLQGAGTDPKDISLIRDAIRKEIDVNVCIQNYCKNGKPFMNQFFMCPLRDENKKLAYFLGVQVVVPKKAPGQQQENPGWIYTMGNH 199          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A7S4J4U8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4U8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.740e-55
Identity = 82/161 (50.93%), Postives = 112/161 (69.57%), Query Frame = 0
Query:    5 QSSESTGTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            Q  +S+   F P K L  +D  ++DM+N   +  V  +CV DPDL+D PIIF SDGF +FTGY+ EE+EG+NCRFLQG +T   D+ +IR+A+K+ KE C+ LLNY+KDGS+F N+FF++PL D+   LAYF+G+Q  V     GQ P N GW+Y+ G HA
Sbjct:   21 QEYQSSARQFEPEKRLCERDYTIIDMLNSKGHESVC-FCVCDPDLKDMPIIFSSDGFCDFTGYSHEEIEGKNCRFLQGTETSTEDVDRIRKAIKEQKEECVNLLNYRKDGSSFINEFFISPLLDDNEKLAYFIGVQCSVPKKGPGQMPSNAGWVYSQGNHA 180          
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Match: A0A1E7EP39_9STRA (PAS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP39_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.210e-52
Identity = 83/152 (54.61%), Postives = 104/152 (68.42%), Query Frame = 0
Query:   14 FVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQNKEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQEPENPGWIYTMGLHA 165
            F+P K LS +D  ++DM+N   +   VS+C+ DPD +D PIIF SDGF  FTGY  +E+EGRNCRFLQG  T   DI  IR+AVK+  EA + LLNY+KDG++F NQFFL PL     TL YF+G+Q  V+    GQ P N GWIY+ GLHA
Sbjct:   35 FIPEKPLSERDMTIMDMINSVGH-EAVSFCICDPDQKDCPIIFASDGFCNFTGYDCQEIEGRNCRFLQGPDTKKEDIDTIRQAVKEETEASVNLLNYRKDGTSFANQFFLAPLRGSDSTLLYFIGVQCSVEKLGPGQAPSNVGWIYSQGLHA 185          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L122_9PHAE1.820e-11695.15PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A126X2E3_9PHAE3.140e-10887.88Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A126WVC6_9PHAE1.170e-10686.90Putative LOV domain-containing protein n=2 Tax=Ect... [more]
A0A126WXS3_9PHAE9.530e-9981.93Putative LOV domain-containing protein n=1 Tax=Des... [more]
A0A126WZ19_SARFS5.960e-8471.69Putative LOV domain-containing protein n=6 Tax=Sar... [more]
A0A6U0JAP0_9STRA1.740e-5853.33Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A835ZDN1_9STRA1.940e-5656.21PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A126WWA7_9STRA1.140e-5556.95Putative LOV domain-containing protein n=1 Tax=Syn... [more]
A0A7S4J4U8_9STRA1.740e-5550.93Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1E7EP39_9STRA2.210e-5254.61PAS domain-containing protein n=1 Tax=Fragilariops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20coord: 41..155
e-value: 1.6E-40
score: 140.4
NoneNo IPR availablePANTHERPTHR47429FAMILY NOT NAMEDcoord: 41..147
NoneNo IPR availablePANTHERPTHR47429:SF2PROTEIN TWIN LOV 1coord: 41..147
IPR000014PAS domainPFAMPF13426PAS_9coord: 48..141
e-value: 8.5E-18
score: 64.5
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 51..139
e-value: 9.2E-9
score: 33.5
IPR000014PAS domainPROSITEPS50112PAScoord: 50..99
score: 8.719
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 43..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig103contigEcto-sp6_S_contig103:117858..123994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig103.890.1mRNA_Ecto-sp6_S_contig103.890.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig103 116746..124102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig103.890.1 ID=prot_Ecto-sp6_S_contig103.890.1|Name=mRNA_Ecto-sp6_S_contig103.890.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=166bp
MGGAQSSESTGTPFVPTKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLE
DNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDIAKIREAVKQN
KEACLCLLNYKKDGSTFHNQFFLTPLFDEAGTLAYFLGIQVQVKTASDGQ
EPENPGWIYTMGLHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf