prot_Ecto-sp6_S_contig102.873.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.873.1
Unique Nameprot_Ecto-sp6_S_contig102.873.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match: D7G976_ECTSI (Fibronectin type III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G976_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 9.700e-133
Identity = 198/207 (95.65%), Postives = 204/207 (98.55%), Query Frame = 0 
Query:    1 MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWSFMKAEGSAQNPDAQRVRASCVEYEEMEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN 207
            MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELW+FM+AEGSAQ+PDAQRVRASCVE+E  EIG+VELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATA+TFEAFCEDENIERVTRVASVLEAYPRNKR GRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN
Sbjct:    1 MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWTFMQAEGSAQSPDAQRVRASCVEHE--EIGVVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAMTFEAFCEDENIERVTRVASVLEAYPRNKRSGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN 205
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BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match: A0A6H5KTN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN7_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 2.460e-104
Identity = 155/170 (91.18%), Postives = 164/170 (96.47%), Query Frame = 0 
Query:   38 LRAEWDADDEPCQKKLSFELWSFMKAEGSAQNPDAQRVRASCVEYEEMEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN 207
            +RA+WDADDEPCQKKLSFELW+FMKAEGSA NPDAQRVRASCVE+E  EIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVA V+EAYP NK GG+TRRHLQS+TS+AGQAHQVAELIDGLKNLGCTRTTGED+KLCVLSDSFN
Sbjct:   15 IRADWDADDEPCQKKLSFELWTFMKAEGSAHNPDAQRVRASCVEHE--EIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVAPVVEAYPFNKHGGQTRRHLQSSTSQAGQAHQVAELIDGLKNLGCTRTTGEDKKLCVLSDSFN 182
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G976_ECTSI9.700e-13395.65Fibronectin type III domain-containing protein n=1... [more]
A0A6H5KTN7_9PHAE2.460e-10491.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.737

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:551155..553034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.873.1mRNA_Ecto-sp6_S_contig102.873.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 551155..554703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.873.1 ID=prot_Ecto-sp6_S_contig102.873.1|Name=mRNA_Ecto-sp6_S_contig102.873.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=208bp
MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQ
KKLSFELWSFMKAEGSAQNPDAQRVRASCVEYEEMEIGLVELITPKGYTM
SDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEA
YPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLC
VLSDSFN*
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