Homology
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match:
D7G976_ECTSI (Fibronectin type III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G976_ECTSI)
HSP 1 Score: 482 bits (1240), Expect = 3.480e-171
Identity = 252/266 (94.74%), Postives = 258/266 (96.99%), Query Frame = 1
Query: 1 MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWSFMKAEGSAQNPDAQRVRASCVEYEEMEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN*LGDAATLKDLGDLPEVEVVKEIPEGYEGTDEGSAMIELAYDIASGATFKFSTAKGGEQ 798
MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELW+FM+AEGSAQ+PDAQRVRASCVE+E EIG+VELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATA+TFEAFCEDENIERVTRVASVLEAYPRNKR GRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN GDAATLKD GDLPEVEVVKEIPEGYEG DEGSAMIELAYDIASGATFKFSTA GGEQ
Sbjct: 1 MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWTFMQAEGSAQSPDAQRVRASCVEHE--EIGVVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAMTFEAFCEDENIERVTRVASVLEAYPRNKRSGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDSGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGGEQ 264
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match:
A0A6H5KTN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN7_9PHAE)
HSP 1 Score: 337 bits (865), Expect = 4.450e-115
Identity = 172/191 (90.05%), Postives = 182/191 (95.29%), Query Frame = 1
Query: 112 LRAEWDADDEPCQKKLSFELWSFMKAEGSAQNPDAQRVRASCVEYEEMEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN*LGDAATLKDLGDLPEVEVVK 684
+RA+WDADDEPCQKKLSFELW+FMKAEGSA NPDAQRVRASCVE+E EIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVA V+EAYP NK GG+TRRHLQS+TS+AGQAHQVAELIDGLKNLGCTRTTGED+KLCVLSDSFN LG AATLKD GDLPEVEV+K
Sbjct: 15 IRADWDADDEPCQKKLSFELWTFMKAEGSAHNPDAQRVRASCVEHE--EIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVAPVVEAYPFNKHGGQTRRHLQSSTSQAGQAHQVAELIDGLKNLGCTRTTGEDKKLCVLSDSFNYLGKAATLKDSGDLPEVEVIK 203
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match:
UPI00196B5695 (Ig-like domain-containing protein n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI00196B5695)
HSP 1 Score: 64.3 bits (155), Expect = 6.230e-8
Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 577 TGEDQKLCVLSDSFN*LGDAATLKDLGDLPE-VEVVKEIPEGYEGTDEGSAMIELAYDIASGATFKFST 780
TG + V+SDSFN LG AT GDLP V +VKEIP G+ GTDEG M + Y IA GAT F++
Sbjct: 185 TGAGVSVGVMSDSFNYLGGYATDISTGDLPSGVNIVKEIPSGFTGTDEGRGMAQNVYKIAPGATLSFAS 253
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match:
UPI00168A40D6 (S8 family serine peptidase n=1 Tax=Spirosoma validum TaxID=2771355 RepID=UPI00168A40D6)
HSP 1 Score: 61.6 bits (148), Expect = 3.730e-7
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 484 RHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN*LGDAATLKDLGDLP-EVEVVKEIPEGYEGTDEGSAMIELAYDIASGATFKFST 780
+++ TTS+ +A Q +++ + N+ +G K+ V+SDS+N L AA GDLP V+VV++IP Y G+DEG AM E+ +D+A GA F+T
Sbjct: 152 KNVGKTTSQGDRA-QKSDVARQMYNV-----SGAGSKVGVISDSYNSLRGAADGVASGDLPPNVQVVRDIPARYTGSDEGRAMAEIVHDVAPGANIAFNT 245
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match:
A0A1I1N3X0_9BACT (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Spirosoma endophyticum TaxID=662367 RepID=A0A1I1N3X0_9BACT)
HSP 1 Score: 58.5 bits (140), Expect = 4.260e-6
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 577 TGEDQKLCVLSDSFN*LGDAATLKDLGDLP-EVEVVKEIPEGYEGTDEGSAMIELAYDIASGATFKFSTAKGGE 795
TG K+ VLSDS+N LG A GDLP V+V++EI + G+DEG AM E+ +D+A GA F++A G+
Sbjct: 177 TGAGNKVGVLSDSYNALGGAPDGVASGDLPPNVQVLEEIDDLTNGSDEGRAMAEIVHDVAPGADIAFNSAFNGQ 250
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match:
A0A845YP49_9CYAN (S8 family serine peptidase n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YP49_9CYAN)
HSP 1 Score: 57.4 bits (137), Expect = 9.920e-6
Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 577 TGEDQKLCVLSDSFN*LGDAATLKDLGDLPEVEVVKEIPEGYEGTDEGSAMIELAYDIASGATFKFSTAKGGE 795
TG + VLSDSF+ LG A + GDLP+V V+ ++P G G+DEG AM++L DIA GA F TA G+
Sbjct: 121 TGAGVTVGVLSDSFDNLGGATADRLSGDLPDVNVLLDLPGG--GSDEGRAMLQLIADIAPGADLAFHTAFLGQ 191
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Match:
A0A2T2S5Q7_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium QH_10_64_37 TaxID=1919091 RepID=A0A2T2S5Q7_9BACT)
HSP 1 Score: 57.0 bits (136), Expect = 1.410e-5
Identity = 48/119 (40.34%), Postives = 59/119 (49.58%), Query Frame = 1
Query: 496 STTSEAGQAH--QVAELIDGLKNLGCTRTTGEDQKLCVLSDSFN*LGDAATLKD---LGDLP----------EVEVVKEIPEGYEGTD-----EGSAMIELAYDIASGATFKFSTAKGG 792
S SEA AH A L G T+G QK+CVLSDS+N A + + GDLP V+V+ E Y+GTD EG AM++L +DIA GAT F TA GG
Sbjct: 191 SVESEADSAHAADTARLNTG--------TSGNGQKVCVLSDSYNTASVATSASEDVQSGDLPGNGNPAGRTTPVDVL----EDYDGTDPSPTDEGRAMLQLIHDIAPGATLGFHTAFGG 297
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.873.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 7
0 1 Expect = 3.48e-171 / Id = 94.74 Expect = 4.45e-115 / Id = 90.05 Expect = 6.23e-8 / Id = 52.17 Expect = 3.73e-7 / Id = 39.00 Expect = 4.26e-6 / Id = 45.95 Expect = 9.92e-6 / Id = 47.95 Expect = 1.41e-5 / Id = 40.34 Sequence D7G976_ECTSI A0A6H5KTN7_9PHAE UPI00196B5695 UPI00168A40D6 A0A1I1N3X0_9BACT A0A845YP49_9CYAN A0A2T2S5Q7_9BACT
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.873.1
>prot_Ecto-sp6_S_contig102.873.1 ID=prot_Ecto-sp6_S_contig102.873.1|Name=mRNA_Ecto-sp6_S_contig102.873.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=208bp
MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQ KKLSFELWSFMKAEGSAQNPDAQRVRASCVEYEEMEIGLVELITPKGYTM SDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEA YPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLC VLSDSFN* back to top mRNA from alignment at Ecto-sp6_S_contig102:551155..554703+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.873.1 ID=mRNA_Ecto-sp6_S_contig102.873.1|Name=mRNA_Ecto-sp6_S_contig102.873.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3549bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:551155..554703+ (Ectocarpus species6 EcLAC_371)ATGCCTCTCCTGGGGGCACTATTTTTGGCACTCACCAGCGGTGCAGTGAT
CGGACGCGCTTCCGGCGAAAGTGTGGAAAGCTCGGCGTGCGAGTTTTCAA
CGTTCCTTTCGCTCAG GTGCGGCGTTGCATGTTGCACGGCGTTGTCGTTA
TTTTTTGTTTTTTTCAACGAAGAGGACCGCTGTAGGATTCCGTCGGGATC
GTGTGCGGTTCGGAAATGTTTGCCTTTACTGCTGCAAACAAGCACCTAAT
GGCGGACTGTTATCGAGCAGGACCACTTCTAAAGAACCACAGCGTTCTAC
TCGCGTGGAGCAAGAACATTATTGCAAACACACGTGGAGCATGTGCGACT
CCTACCTATGATGAACCCTCCCTTCCGCTTTCATTGCGGCCGGAACATGT
TTCCGGTGTCTTTGCTTGTGGCTGCTGTGTCCATGGACGGTCGTCTCAGC
ACTTGGTCATTTGACGGCGTCGAACGAAATAAACAGCCCAATGAACTACG
GTGCATCCTCGACGCACCCCTGGAGTTCATGAGAAGTTAGCTTGCTTGGA
TCGACGTTCGAGAGTTCTAATGCACAGTGCAACAACACATGTCGCATGAT
ATCGTTCGTTCATCAGAGCGGAGTGGGATGCGGACGACGAGCCGTGCCAG
AAAAAACTATCCTTCGAGCTTTGGTCGTTCATGAAGGCCGAGGGATCAGC
CCAGAACCCTGACGCTCAGCGCGTTCGAGCCAGCTGCGTCGAGTATGAGG
AAATGGAAATTGGACTGGTAGAACTCATCACTCCCAAG GTGCACGATTGG
TTCTATGTGGTGATGTTAGACTTGACGTACCGACACAACCATTCCTCACG
CGGTGTTCGTCTAAGCCGAACGTAAAAGTTGTTGCTAGTTGTACACACAA
CGCTGGAAGCATCACAACGACGCTACCTTTTCCATCTTGCCGGGAATGAA
CGGTACATACTCTTCATCCAAGATGGGCAATTTTATTTATTGAAAACCTA
CCTTCTCTGCCTCTTCATCGCCTTTGAGTGCAGGGATACACCATGTCTGA
CAGCGTGAGCGCGGCCCCAGGAAGCGTGGTCAGCGAGACCGACCATGCCT
CTTCGTACCAAGGCGCCACCGCCATCACATTCGAAG GTGGCCATGAAACG
ATTACCTCCCGCTAGGTAGTCGTTGATAAATATATAAATCGTCAAGAACG
TTTTGGCGTTACGCATGCAATACTCCCTCCGTAGATCCTGCATTCGTAGC
TGCCAATCACCAATCAAAAGGCTGATGACGTGCACTGCTGCATCGATTGG
TACCGTCCGCACGAATTTTAACACGTAGCGTTCTGCGAGGACGAGAACAT
TGAGCGAGTTACTCGGGTTGCCTCTGTTCTGGAGGCGTACCCGCGCAACA
AGCGGGGTGGCCGAACGCGGCGCCACCTTCAAAGCACCACCAGCGAGGCA
GGACAAGCGCATCAA GTAAGGCGACCTCGACTATTGTTGCATTTGGTGGC
ATCGTGCAGATCAAAAGTTTGGGGCAAGACAACAATGTTTGCCCTTTGGA
TTGAACATGTGGCGACATGAACCTCGACATATTTAACGGATTCCTGACAG
TAAATCAACTACTTCTCTGCCTTGAAAACGGTTGGCAAAGCAAGTGGGAC
CCGTTTTAACCGACTCCTCAGAAAACCAAACACACCACGTTTAGAATTGG
ACCCGTCGCACCGCCAAATAAACGTTTGCCGAAAAATGCAGATGTTGAGT
TTCGTACGGGTGCAACCTGATGTGTCAACCACAGGTAGCCGAGCTCATCG
ACGGGCTGAAGAACCTCGGGTGTACGAGAACAACGGGGGAAGATCAAAAA
CTCTGCGTTTTGTCAGACAGCTTCAACTAA CTTGGCGATGCCGCAACCCT
GAAGGATTTGGGAGACCTGCCCGAGGTCGAGGTCGTCAAG GTACGACACA
GGTGGATGTCGACCCACAAGGACCCGGATCGTTTGATCCTATTGTCTATT
GAGCTACTGTAGTTTCTTTTGAACAGTGATGTCGCACATTACTCGTAGGG
TTTGCAGGTTATCTTCTCGTTCTCCGAAACACCGGACAAAGATGGTGACA
ACACGAACTACGGGCAACGACAGACACACAACCCAAGTCTCGTGTTGGCT
AACAATTTTCTGATGACCATACAGAGAGGCTGTTATCAGCAGGTATCATT
CCATATATTGTGTTTCATAAGCGATCGATATTGGGTTGCATAAGATACCG
AAGTTCCACGCAGGGAGAATCAGTAAATTGCATCTCACGCCAAGCATGTT
TGGGTAAACTGTTAGAGATGAAACATTCACAGATTTCTACGGAGACTCAC
AAATGGATGGCGAATGGTTGGACGCTTCAAATACCGGACAGTCTGACGTC
AGTACGGCACCAATATCCGTGGAAACAGGCAAACCGGAAATTCTATGTTC
TCCCGTTGGACACCACACGTCAAAAACACGAAATAGAGCCGTCGAACCGC
TCACTAGCCAGTGTTTGTGACGAGACACGAAGAAAAGACGCGAACCCTAT
TTTTTGGCAAGTCTGCCACAGTTCTTGGTGTTGATCCCCGCCCCCAAGGC
AAGCCACACGCAATTTTGCTCCGGGTGAAATCGCGATCTGTACCTATAAT
TTTACAAACGCGATCGACCAAGAGCCACGCGTAGCGCCGACACGCAAGCT
CGATATGCCCTTATAACCCATTCCCTTGATGTTCGCTGATGTTGGTGACT
AAAAAACAAATACGCGTATTCTGTCATTTTCCAGGAAATCCCCGAAGGTT
ATGAGGGCACTGACGAAG GTGTGTGCGGTCTCTCTCTTTGGTATGTTGAC
GCATGTATGCACGTGCGTTCTACCTCCCATCGATTCTTGATGCCATTCTG
TACGCTGTGTCCGATTTGGGAACGCCAACCCATTCGTCATTGAGGTACCC
ACTGTACCTGTACCACCATCCCGTTAACCTATCAGCAGCACCGTTCAGCT
CAGGTCCCACTTTCCAGCTGAATCTCCATGTGCGCGTGTTGTAACCCACG
AAAGAGCGAAACGATTGCTGCACCCGCGCCTCACGTACGAACCACAAACA
CAAAGGAGGAAAGGGTGAAAAATATAGTACGAGTAGATAGATATCTCGGT
AGACGTGTGCTTGTTTGTTTCATCGTACCTGCCGTTTCTGTTTCACGGTG
CCCAGGGTCACGGCCATGAAAATGCTTTGCCGTTTTTACCCAAGCTGAGA
CGACGTACTTCCGATGGCCAACTGGTGGTCGACGCTAAGAAAAACATAAC
GTGCGTACACCTGTGGTCTAGTGCAGTATTTTGGACTGAGAAACTCTTTT
TCCGTCCTCTGCACATGCTTCATCTTGTCTTCATGCACGCATGTTTCATT
TTTACACTCTGCACTAGCGTCAAGAGTTGGCGTTCTGATACGCATCCACC
GCACGTGTTTGGTATCTAGGATCTGCCATGATAGAGCTCGCGTACGATAT
CGCGTCTGGAGCAACGTTCAAGTTCAGCACGGCCAAGGGTGGCGAGCAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:551155..554703+
>mRNA_Ecto-sp6_S_contig102.873.1 ID=mRNA_Ecto-sp6_S_contig102.873.1|Name=mRNA_Ecto-sp6_S_contig102.873.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=624bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:551155..554703+ (Ectocarpus species6 EcLAC_371) ATGCCTCTCCTGGGGGCACTATTTTTGGCACTCACCAGCGGTGCAGTGAT CGGACGCGCTTCCGGCGAAAGTGTGGAAAGCTCGGCGTGCGAGTTTTCAA CGTTCCTTTCGCTCAGAGCGGAGTGGGATGCGGACGACGAGCCGTGCCAG AAAAAACTATCCTTCGAGCTTTGGTCGTTCATGAAGGCCGAGGGATCAGC CCAGAACCCTGACGCTCAGCGCGTTCGAGCCAGCTGCGTCGAGTATGAGG AAATGGAAATTGGACTGGTAGAACTCATCACTCCCAAGGGATACACCATG TCTGACAGCGTGAGCGCGGCCCCAGGAAGCGTGGTCAGCGAGACCGACCA TGCCTCTTCGTACCAAGGCGCCACCGCCATCACATTCGAAGCGTTCTGCG AGGACGAGAACATTGAGCGAGTTACTCGGGTTGCCTCTGTTCTGGAGGCG TACCCGCGCAACAAGCGGGGTGGCCGAACGCGGCGCCACCTTCAAAGCAC CACCAGCGAGGCAGGACAAGCGCATCAAGTAGCCGAGCTCATCGACGGGC TGAAGAACCTCGGGTGTACGAGAACAACGGGGGAAGATCAAAAACTCTGC GTTTTGTCAGACAGCTTCAACTAA back to top