prot_Ecto-sp6_S_contig102.865.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.865.1
Unique Nameprot_Ecto-sp6_S_contig102.865.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length164
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: D7G979_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G979_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.940e-81
Identity = 145/167 (86.83%), Postives = 145/167 (86.83%), Query Frame = 0
Query:    1 MMVQGFSSVFASAVCLLAASTSAFVVPSARVHALAPRAATTTTATSASALRTSARHSRRSALFMSEEAEEVAPEAP----VAEQDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 163
            MMVQGFSSVFASAVCLL ASTSAFVVPSARVHALAPRAA  TT      LRTSARHSRRSALFMSEE             VAEQDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM
Sbjct:    1 MMVQGFSSVFASAVCLLTASTSAFVVPSARVHALAPRAAAATTXXXXXXLRTSARHSRRSALFMSEEXXXXXXXXXXXXXVAEQDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 167          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: A0A836C6Z0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Z0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.390e-13
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   80 QDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVA-MSATIALLPSPDS 162
            +D A+        FF PN N+R G+SRDQDGKSNVWA+EPKM+VE    E     + L  G I+ A+  A + AT+A LPSPD+
Sbjct:   66 EDEAEAPQFGQSGFFQPNANMRYGASRDQDGKSNVWAIEPKMKVE----EGENKGASLATGAIILAVAAAAVVATLANLPSPDT 145          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: A0A835YKW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.400e-10
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   93 FFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 161
            FF PN N+R G+SRDQDGKSNVWA+EPKM V+  D     SN       ++ A +V ++  I+ LPS +
Sbjct:   86 FFQPNANMRYGASRDQDGKSNVWAIEPKMAVDTDDKSGALSNGF----AVLAASLVVVAGVISQLPSAE 150          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: A0A6V1QUM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QUM9_HETAK)

HSP 1 Score: 64.7 bits (156), Expect = 6.200e-10
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   94 FAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 163
            FA NE  R+G SRD+DGKSNVWAV PK  V  +  +   S SL     +V  L V ++ATI+ LPSPDS+
Sbjct:  111 FANNERSRVGVSRDEDGKSNVWAVFPKEEVVDSQAD---SGSLSTAAVLVAGLSVLVAATISFLPSPDSL 177          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: A0A7S2W9V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9V8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 9.550e-9
Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   93 FFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 161
            FF+     RLG+S DQDGKSNVWAVEPKM+VE    E       LV+GG   A V   +  + +LP PD
Sbjct:   44 FFSTPPAQRLGTSVDQDGKSNVWAVEPKMQVE-VGKEGQGVQQALVIGGGAAAAVALATLIVNVLPDPD 111          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: A0A7S2BRW2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRW2_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.070e-8
Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 0
Query:  101 RLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 161
            RLGSS DQDGKSNVWAVEPKM VE    E        ++GG   A  +A+   +A LP+PD
Sbjct:   83 RLGSSVDQDGKSNVWAVEPKMEVE-VSKEGDGFKKTAIIGGGAAAAAIAVFGIVANLPNPD 142          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: K0R0P9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0P9_THAOC)

HSP 1 Score: 57.8 bits (138), Expect = 7.590e-8
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 0
Query:  100 VRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 163
            +  G S DQDGKSNVWA+EPKM VE    E    + L  V G+ GA  V  +  ++ LP PD +
Sbjct:   45 IERGVSMDQDGKSNVWAIEPKMEVENKSSEEKTGSVLAAVAGL-GAFAVVAAGVLSNLPDPDQL 107          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: B8LD08_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD08_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 9.730e-8
Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 0
Query:   97 NENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 161
            N  V  G S DQDGKSNVWA+EPKM +E    E     +L+ VGG      VA +  ++ LP PD
Sbjct:   46 NNFVERGVSMDQDGKSNVWAIEPKMEIENKSTEEKTGGALIAVGGFAVFAAVA-AGVLSNLPDPD 109          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: A0A6U2FP18_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2FP18_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.360e-7
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   95 APNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 161
            +P   V  G S DQDGKSNVWA+EPKM V+    E   +++L+ VGG+     VA +  +  LP PD
Sbjct:   45 SPVNVVERGVSVDQDGKSNVWAIEPKMEVDTKSSEEKTTSTLVAVGGLAAFAAVA-AGILTNLPDPD 110          
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match: A0A7S0AI54_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AI54_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.050e-6
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0
Query:  103 GSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 161
            G S DQDGKSNVWA+EPKM V+    E   + +L+ VGG+     VA +  +  LP PD
Sbjct:   53 GVSVDQDGKSNVWAIEPKMEVDTKSAEEKTTGTLIAVGGLAAFAAVA-AGVLTNLPDPD 110          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7G979_ECTSI2.940e-8186.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C6Z0_9STRA1.390e-1348.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKW3_9STRA1.400e-1047.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1QUM9_HETAK6.200e-1051.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2W9V8_9STRA9.550e-949.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BRW2_9STRA5.070e-852.46Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K0R0P9_THAOC7.590e-845.31Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8LD08_THAPS9.730e-846.15Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A6U2FP18_9STRA5.360e-744.78Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0AI54_9STRA1.050e-647.46Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..135
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..163
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.733
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:476875..480408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.865.1mRNA_Ecto-sp6_S_contig102.865.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 475067..480536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.865.1 ID=prot_Ecto-sp6_S_contig102.865.1|Name=mRNA_Ecto-sp6_S_contig102.865.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=164bp
MMVQGFSSVFASAVCLLAASTSAFVVPSARVHALAPRAATTTTATSASAL
RTSARHSRRSALFMSEEAEEVAPEAPVAEQDPAQDATTSVKSFFAPNENV
RLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAM
SATIALLPSPDSM*
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