Homology
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
D7G979_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G979_ECTSI)
HSP 1 Score: 249 bits (635), Expect = 1.670e-74
Identity = 145/167 (86.83%), Postives = 145/167 (86.83%), Query Frame = 3
Query: 129 MMVQGFSSVFASAVCLLAASTSAFVVPSARVHALAPRAATTTTATSASALRTSARHSRRSALFMSEEAEEVAPEAP----VAEQDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 617
MMVQGFSSVFASAVCLL ASTSAFVVPSARVHALAPRAA TT LRTSARHSRRSALFMSEE VAEQDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM
Sbjct: 1 MMVQGFSSVFASAVCLLTASTSAFVVPSARVHALAPRAAAATTXXXXXXLRTSARHSRRSALFMSEEXXXXXXXXXXXXXVAEQDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 167
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
A0A836C6Z0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Z0_9STRA)
HSP 1 Score: 74.7 bits (182), Expect = 4.480e-12
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 3
Query: 366 QDPAQDATTSVKSFFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVA-MSATIALLPSPDS 614
+D A+ FF PN N+R G+SRDQDGKSNVWA+EPKM+VE E + L G I+ A+ A + AT+A LPSPD+
Sbjct: 66 EDEAEAPQFGQSGFFQPNANMRYGASRDQDGKSNVWAIEPKMKVE----EGENKGASLATGAIILAVAAAAVVATLANLPSPDT 145
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
A0A835YKW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW3_9STRA)
HSP 1 Score: 67.0 bits (162), Expect = 2.490e-9
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 3
Query: 405 FFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 611
FF PN N+R G+SRDQDGKSNVWA+EPKM V+ D SN ++ A +V ++ I+ LPS +
Sbjct: 86 FFQPNANMRYGASRDQDGKSNVWAIEPKMAVDTDDKSGALSNGF----AVLAASLVVVAGVISQLPSAE 150
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
A0A6V1QUM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QUM9_HETAK)
HSP 1 Score: 65.9 bits (159), Expect = 1.090e-8
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 3
Query: 408 FAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 617
FA NE R+G SRD+DGKSNVWAV PK V + + S SL +V L V ++ATI+ LPSPDS+
Sbjct: 111 FANNERSRVGVSRDEDGKSNVWAVFPKEEVVDSQAD---SGSLSTAAVLVAGLSVLVAATISFLPSPDSL 177
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
A0A7S2W9V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9V8_9STRA)
HSP 1 Score: 61.2 bits (147), Expect = 9.960e-8
Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 3
Query: 405 FFAPNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 611
FF+ RLG+S DQDGKSNVWAVEPKM+VE E LV+GG A V + + +LP PD
Sbjct: 44 FFSTPPAQRLGTSVDQDGKSNVWAVEPKMQVE-VGKEGQGVQQALVIGGGAAAAVALATLIVNVLPDPD 111
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
A0A7S2BRW2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRW2_9STRA)
HSP 1 Score: 60.1 bits (144), Expect = 5.350e-7
Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 3
Query: 429 RLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 611
RLGSS DQDGKSNVWAVEPKM VE E ++GG A +A+ +A LP+PD
Sbjct: 83 RLGSSVDQDGKSNVWAVEPKMEVE-VSKEGDGFKKTAIIGGGAAAAAIAVFGIVANLPNPD 142
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
K0R0P9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0P9_THAOC)
HSP 1 Score: 58.9 bits (141), Expect = 6.770e-7
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 3
Query: 426 VRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPDSM 617
+ G S DQDGKSNVWA+EPKM VE E + L V G+ GA V + ++ LP PD +
Sbjct: 45 IERGVSMDQDGKSNVWAIEPKMEVENKSSEEKTGSVLAAVAGL-GAFAVVAAGVLSNLPDPDQL 107
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
B8LD08_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD08_THAPS)
HSP 1 Score: 58.5 bits (140), Expect = 8.350e-7
Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 3
Query: 417 NENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 611
N V G S DQDGKSNVWA+EPKM +E E +L+ VGG VA + ++ LP PD
Sbjct: 46 NNFVERGVSMDQDGKSNVWAIEPKMEIENKSTEEKTGGALIAVGGFAVFAAVA-AGVLSNLPDPD 109
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
A0A6U2FP18_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2FP18_9STRA)
HSP 1 Score: 56.6 bits (135), Expect = 4.050e-6
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 3
Query: 411 APNENVRLGSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 611
+P V G S DQDGKSNVWA+EPKM V+ E +++L+ VGG+ VA + + LP PD
Sbjct: 45 SPVNVVERGVSVDQDGKSNVWAIEPKMEVDTKSSEEKTTSTLVAVGGLAAFAAVA-AGILTNLPDPD 110
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Match:
A0A7S0AI54_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AI54_9STRA)
HSP 1 Score: 55.8 bits (133), Expect = 7.540e-6
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 3
Query: 435 GSSRDQDGKSNVWAVEPKMRVEGTDVETPESNSLLVVGGIVGALVVAMSATIALLPSPD 611
G S DQDGKSNVWA+EPKM V+ E + +L+ VGG+ VA + + LP PD
Sbjct: 53 GVSVDQDGKSNVWAIEPKMEVDTKSAEEKTTGTLIAVGGLAAFAAVA-AGVLTNLPDPD 110
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.865.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 14
0 1 Expect = 1.67e-74 / Id = 86.83 Expect = 4.48e-12 / Id = 48.81 Expect = 2.49e-9 / Id = 47.83 Expect = 1.09e-8 / Id = 51.43 Expect = 9.96e-8 / Id = 49.28 Expect = 5.35e-7 / Id = 52.46 Expect = 6.77e-7 / Id = 45.31 Expect = 8.35e-7 / Id = 46.15 Expect = 4.05e-6 / Id = 44.78 Expect = 7.54e-6 / Id = 47.46 Sequence D7G979_ECTSI A0A836C6Z0_9STRA A0A835YKW3_9STRA A0A6V1QUM9_HETAK A0A7S2W9V8_9STRA A0A7S2BRW2_9STRA K0R0P9_THAOC B8LD08_THAPS A0A6U2FP18_9STRA A0A7S0AI54_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.865.1
>prot_Ecto-sp6_S_contig102.865.1 ID=prot_Ecto-sp6_S_contig102.865.1|Name=mRNA_Ecto-sp6_S_contig102.865.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=164bp
MMVQGFSSVFASAVCLLAASTSAFVVPSARVHALAPRAATTTTATSASAL back to top mRNA from alignment at Ecto-sp6_S_contig102:475067..480536-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.865.1 ID=mRNA_Ecto-sp6_S_contig102.865.1|Name=mRNA_Ecto-sp6_S_contig102.865.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5470bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:475067..480536- (Ectocarpus species6 EcLAC_371)ACACCCCCAACGTCCCACAAACGTTCGACCGAAGCCACCAACGCTCTAAT
CCCCAACAACACTCTCGGCAAGCGAAGTGCTCTATACCGCATCACAGAGT
TACCTAGATACCTCTTCACAACACGATC ATGATGGTACAAGGCTTTTCCA
GCGTCTTCGCATCGGCGGTGTGTCTCCTAGCAGCCTCGACGTCCGCGTTC
GTAGTGCCCTCCGCGCGCGTGCACGCGCTCGCACCCCGCGCCGCCACCAC
CACCACCGCCACCTCGGCATCCGCCCTCCGAACATCAGCAAG GTGAGAGA
GAAGGGTTCGGTGTGTGTGTGTTTGTGTGTTTGTGTGTCGCATCCGGTTT
TGATGTCAAAAGCTTTGTTCCTGTTGCGCGTTGTTGGCTAGCGAGATTCT
TCTTGTTTCGTCACCATCATCATCGTCGCACACCTCGGCTCGATTGTGAC
TTACCCCTTGGGGGTTGACTAGGCAGTGCATATCCCGCCCCCTCCCTATG
CGGGGTGTGGCAGTCACATGCAGGTCGGTCTCCTCTGAGCCCAGCAGCCC
CTTGGCAAGCACAGCTCTTGAGAGGCGGCAAGGCAAAATGATGTGGTTTT
TTCATGCTCCCGATGACGTTGACGTTGGATCAAACGAGGATTGGGCGCCC
CCAAAAAATTCGGCGACATACTTTCTGACTGGATGACGCAGTACACGTCA
CGCTTGTAGGTGATTGTGATCGATCTCGAGGAGTCACAGCAGCAGCAGCA
GCAGCAGCCGCAGCGAGGTCTAGATAGCAGCATCGTGTCGAGCCGCTGTG
TTGACGGACCGGTATCTTTGGCAACAGGTCGAGCAGTGCAACTCCAGCGT
AAGGTGTACACTGACTCTGCGTTTTGTGACACGGTCGGTCTAATACGTCA
GCTACTGCTGTTGTATCTACAGTACACAACACGCGGTACGTAATGGTGTG
TAGAAGTAGTCTAGCAGTACCAGGCGCGGAGAAATTAACGAGACCCTCCT
CGCCGCGCGAGGTCTTGCCGTACGATATATGACATGCATGCATGCATACG
ATGATGGGATCTCACGCGTGATGTTTTTTCAACGGGCTCTAGTTTCGCAA
GGGTTGGTGATCCCGGGCCCTGCTGTGCGTTGGTGGTGGTCACAGCGACA
TACACACAACAAGAGTTATTCCGTCGCATTGTCAAACAACTTCGTGCTTT
GTACCTAATAGTCTACAGCAGTGACAGCACGAGGACTGTTTGTGCCCCGC
TTACAGCAATGCAGACTTGCTTAAGCAGCAGTGCACCCTACGGATGACCT
CTGCTGCACCCAACAGCAGATCGAACCACTCGCGCGCCGCGGGGGGGTCT
AGAGCTAAAGTCGAGCTCCCATGCAACACCTATCCCGCTCACATACATAT
CCTGTTTGTTCCGGGGCGGTTGGTTCAGTGAGAACCTGGGGACACGCTTC
GGGGCTACAGACGAAAATGCAGCCAATCATGACGAAGTCTAGATGGAGGG
ACGGGCTGCTTGCATTGTATCTACTACTGCTGTCAATCATGGAAGTCTAG
CTGGAGGGACGGCCTGCTTGCATGGTAACTAAAGGCTGCAACGACGGCCA
ATCGTACAGGCTGTGCTCGTGTACGGTATCCCTACATAATGGTATCTTTA
CAGCCGCAACGATAGCCGGTCGGACTGCTCGCGTACATGTACGGCAGATC
AGTACGGTAACGGCGCCGCGCCCTCTCCGTTTGGTTCTCCGCGGCATCCT
TCCCACCCTTTTTTGCGGCAGGCACAGCCGGCGGTCGGCGCTGTTCATGT
CGGAGGAAGCGGAGGAGGTCGCGCCGGAGGCGCCCGTGGCAGAGCAAGAC
CCCGCCCAGGACGCAACAAC GTGAGTGTTCGTTGATTTCTGTAGCTGTTG
TTTTTGTGTGTGTGGGTGCGCCCCCCGCCTCCGCCCCCCCCTCCTCCACC
CTCGTGTCACTACAGCGTAAGTGCTGGTTGTTGTTGGTTACGTTTGTGGG
TACGGGGCCCCCCCCCCCCTCCTCTCCGCGTTGCCCCTCGTGGCGGAGAA
ACCCCCCGCCCAGGACGCAACTGCGCGCTGGTTGTTGTTGTTGTTTGTGT
GCATGTGTAAGGAACCGCCTACCTACCCCCCGCAAGAAAGCAACTCTCGA
GTCCATGTCCACAGCTTTTTCCCACCCCAGCCTCAAAATCAGCGGCGAGG
AGATGGGTATTGAACATGCAGAGGTAAAGTGTGTTTTTTGTACATGAAAA
CACGGAAAGAATGAGAATGACGTCGGGCGAATAATCGTTTCGCGTCGTCT
GCTGCGAACAGAGTGCGAAGAAACAATACCGGGGGGGGGGGTGTACTCAA
AGTCGTGCATGCCGTCGTCGTTAGACCATTGACCTCGCATCCCTACAAAG
CCGGGACGGAGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCGCCA
AGCGCGAAGCGCCGTGGGGGGGGGACTAAGAAAGTTTCAAAGGGACAGGA
TGGCACGGAGAATAACAACAGCAGTTGCCTGCGAGACAACTGAGTCTTGA
ACACTACCGGAGTAGATGTTGCCTCAGCACCACAGATGTATCGACGTGCA
AACTAGAGGGACGAAAACCCATTTCCAGACCACTTGTATTTGTGGCGAGC
TTACACTCATGGAAGCCCCACGGATCACTTCCTCCGTGCGTTGAACACGG
CTTGTACCATGAGTGTTCCAACTTGGTCTCGAGTGTAGGGTTCAAAATTG
AGCACCATTTCGTGCTACAAGTATCATCGTACCATGACACTAGACGTTCG
TGATGCCGCGTTGACTTTTTTTTGTGTGTTTTGTACGTGAATTTTTTTCT
CCGCGGAAAAAGATTCGTTGGCAAGAGAAACGTGTCTATCCTCGGTACAG
TAGAGCAGGACTTGGATGCCCCCTTTTGTTGACGATAGTTCATGGCTAGC
TCCGCCCCCTCCTCCCGCCTCGCGTCAAACCTTTGTGTCGTTTGTTCGCT
GACCGTGGCTTGTTCGTTATTTTTCTCTTGCTCCCTTTTGTTTTTTCTTG
CCTTTTTTTTTTTCACTCTTGTTTTCTCAGGAGTGTAAAGTCGTTCTTCG
CGCCCAACGAGAACGTCCGACTGGGATCCAGCCGCGACCAGGACGGAAAG
TCCAACGTGTGGGCTGTCGAGCCCAAGATGAGGGTGGAG GTGAGCATGAG
GATGGAAGCGATAGACAAAAACCAATGAGAGTGTGCTGGGACAGCGAGAC
CTATCAAACATCGGGGGCGTGTGAACAACAGGATGACACCGCCAACTTGT
CCCAGATGGTTCTTATGCATGGCATTCGACGCGAAAAATGTTTGTCCCTG
GCCCCTTAACAACACAAGACATTTCAAATTGCTACATCTTGTCTCGATCC
ACGAAGCTGCATCCAGATTATACCTTGCAATGAAATCGGGTCGAGTCGCC
CACTCTTGCTCTGAACCGCGCAACAACAAGGTCGCCGTTATTGCCAACCT
TCCCCCGCCGTCCCCCCTCTCCACTTGAATCGTTCTTTGCAGGGGACTGA
CGTGGAAACCCCCGAGTCTAACTCGCTGCTTGTCGTGGGGGGGATCGTCG
GGGCGCTGGTGGTGGCAATGTCGGCAACGATCGCCTTGCTGCCGTCTCCG
GACTCCATGTAA AACGCCAAAGTCTATTTTCAGCACGGTCGGGGGGGGGG
TTGGCCCGACGGGTGGGCGCGAGTGGCGGCGGTGCGGTGGTGTTGGTGTA
TGGGGCATCGCTTCACGGGAGCATGTATACAGAGCCGGGCATGATTGCCG
CACCGCCATTGCGAGCATCCCCGTGAAAAGGAGGATCAAGAAGACCCACA
GAACCGAAATCTTTGGGTGTTGGACGATATCGTCGGCGCCCTTCTTTGGG
AAGGAGAACGCCTCTTCGAGGGGGGGACTAGACAAAGAAGTGCGTCGCAG
AGAGGCGCTTTCCTTCTTCTGCTGTCTTTGTCTCAGTTCAGAAGAGTTCG
GGAACGGTTTAGTTCGAGCTGGTTGTTGTCGCGCGCTCGCCCGGTGCCAG
CAGATACAAGACTCGGTTCTAGGAGTTGAGAACCTAGTGATTGGGCCAAT
AGCACACTCTTGACTCGACCGCACTTGATTTTACCCCGTTGTTTTCTGTT
TTTCTGGAGTTGAATCGAAAGAGCAAACAAGGGATCATGCAAGACGAGAA
AATAGAAGATAGTTCAGGCAGGCGGCGGGGGCACGAATGCCGAGAGCCGG
GAGAACTAAGCTCTACATGGAAGCATGTGAGATAAAATAGCTGCTTGTGT
GCGTGTGTCTGTTTTTCCATCCGTGCTTTTACATGTGGGTGATGGCACTC
CTTCGTGAAAAAGGAACACCGAGTCGGGCGACCGATTCTGTAGGGTGCTA
CATACGAGCACGAGCGAGCTATGATAAAACTTGTGGTTGGGGCCATTGAC
GTTGTTGCTGGCGTTGCATCGTCCAAGTCGTGTGTGGAACCCATGAACGC
ACGCCGAGGGGAACGGGAGGAAAAATCCTTGTCAACCGAATGCAAAACCC
GGGTTTAGTCATGCGGGGGAGGGGGTGGTTTTTAGGTTTTTCTTGAAATT
GTAGCACGCCGGCTTGTACGAAACACGGGTCCGGGTAGAGATGTTGTGTG
TGTTTGTTTCTTGTGGGGACGGTATTCTGGGGCGCGGGGGAAGGAGTTTA
GAAGTTCAACGTGCCTCTGGCGAGCGGGTCTGTAGCTGGAGGGCAGGCTG
GTTAGGATGATTCGGCGCGCAAGGGCATCGTCTCACAAGACCGACATGGT
GGAAACGGGGCGTCTCTCGTGTCAAAGGCCGAATATATTACTACTGGTGC
GGTTTTTCGGCGGCGGTGGTGAATCGTTAACGATGCCGGATGCTGTGCCG
TCGGCGTGGTGGTGTTGCGCTTTTTTTGGCTGTGCCACGAAAGAGGAATG
TGTGTTGCTAGCGTTTGCGTCAGTTTGGGGAGGGCAGCGTCTCGGGTGTA
GTAGTGTACGCACCGCCCCTTTTTGGGTGTTTTCGTAGAATCGAGGTCTT
CCAACAATCAAATTATCATATTGCACCAACGTTTCTTTTTCGTGGCGCTA
ATTTACTTCGAGAATGATTCTTTTTCTTCTTTTTATTAAAGATGTTCGTC
ATCGGGCGAGAGAGATACATCGCCGTGAAGCGCAACGCGACGGCTTTGTC
AATGCACGCGTCCCAAGGGGTACTGCTGGAGACTTGAGGGAATGCGTATC
GTCCCCAGTCTTTCATGTGCGGCCTGGAAAATATTGCCGACTAGGCGAAG
GGCACCGAGAAGATGGATAACTCGGACTTGAGCCTCCCACCCGCGATGTG
TGAATCGCGACTGGCTGTCCACGTTGTTTCGCACAAAAAAGTTGAACGTT
TTGATGGCGAAGTCCAGCGAGCCCGACCATGCCCTTGCGAATGCTGAGTT
CATGCGATCAAGTTATCGAC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:475067..480536-
>mRNA_Ecto-sp6_S_contig102.865.1 ID=mRNA_Ecto-sp6_S_contig102.865.1|Name=mRNA_Ecto-sp6_S_contig102.865.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=492bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:475067..480536- (Ectocarpus species6 EcLAC_371) back to top