prot_Ecto-sp6_S_contig101.795.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig101.795.1
Unique Nameprot_Ecto-sp6_S_contig101.795.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp6_S_contig101.795.1 vs. uniprot
Match: D7FPM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM8_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.410e-88
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0 
Query:    1 MSSYEWKNMSAQAQKANKEFGELSREEIRKAGEEEVDKVEKALKAMEPFNDVFEVRREGLEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDKGSGRWIGEADKHDFQGMLTGDIIQSACGIPDF 132
            MSSYEWKNMSAQAQKANKEFGELSREEIRKAGEEEVDKVEKALKAMEPFNDVFEVRREGLEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDKGSGRWIGEADKHDFQGMLT DIIQSACGIPDF
Sbjct:  104 MSSYEWKNMSAQAQKANKEFGELSREEIRKAGEEEVDKVEKALKAMEPFNDVFEVRREGLEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDKGSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 235
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BLAST of mRNA_Ecto-sp6_S_contig101.795.1 vs. uniprot
Match: A0A835Z714_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z714_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.420e-21
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:   35 EVDKVEKALKAMEPFNDVFEVRREGLEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDKGSGRWIGEADKHDFQGMLTGDIIQSACGIPDF 132
            E+++V  A+  M+  N +FEV     +V  +LGP++GTY I+F   +  + L SPRSG   Y++D+ + +W+G  D HDF+GMLT D+IQ A G PDF
Sbjct:   13 EMERVVAAVDRMKEDNAIFEVIHADGKVSIDLGPKIGTYQIRFVHDLRVLQLSSPRSGGFMYVYDEKTRKWLGREDAHDFEGMLTRDLIQQANGYPDF 110
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPM8_ECTSI1.410e-8899.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z714_9STRA5.420e-2143.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002908Frataxin/CyaYPFAMPF01491Frataxin_Cyaycoord: 25..123
e-value: 1.3E-8
score: 34.9
IPR002908Frataxin/CyaYPROSITEPS50810FRATAXIN_2coord: 23..132
score: 10.765
IPR036524Frataxin/CyaY superfamilyGENE3D3.30.920.10coord: 14..128
e-value: 4.2E-8
score: 35.1
NoneNo IPR availableSUPERFAMILY55387Frataxin/Nqo15-likecoord: 51..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig101contigEcto-sp6_S_contig101:267506..268500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig101.795.1mRNA_Ecto-sp6_S_contig101.795.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig101 267215..269379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig101.795.1 ID=prot_Ecto-sp6_S_contig101.795.1|Name=mRNA_Ecto-sp6_S_contig101.795.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=133bp
MSSYEWKNMSAQAQKANKEFGELSREEIRKAGEEEVDKVEKALKAMEPFN
DVFEVRREGLEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDK
GSGRWIGEADKHDFQGMLTGDIIQSACGIPDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002908Frataxin/CyaY
IPR036524Frataxin/CyaY_sf