Homology
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
D7FPM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM0_ECTSI)
HSP 1 Score: 323 bits (829), Expect = 6.990e-108
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
Query: 19 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE
Sbjct: 1 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 165
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
A0A835YTI9_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI9_9STRA)
HSP 1 Score: 278 bits (711), Expect = 5.250e-90
Identity = 138/165 (83.64%), Postives = 155/165 (93.94%), Query Frame = 1
Query: 19 MGPPPP-TGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPD 510
MGPPPP + E +YV+LRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQK+T +WKGLPITVKLTI+NRQATVSVIP+ASSLILKALNEPERDRKKVK++KHDGNVTLDQ+I++ARVMR RSMARTLAGTVKE+LGT SVGCTVNG +PRD+Q I++GEIVIPD
Sbjct: 1 MGPPPPASAEEKYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKSTMDWKGLPITVKLTIVNRQATVSVIPSASSLILKALNEPERDRKKVKHVKHDGNVTLDQIIDVARVMRARSMARTLAGTVKEVLGTAFSVGCTVNGMAPRDVQKAITDGEIVIPD 165
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
A0A7S2UAZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAZ7_9STRA)
HSP 1 Score: 259 bits (663), Expect = 8.690e-83
Identity = 122/165 (73.94%), Postives = 152/165 (92.12%), Query Frame = 1
Query: 19 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
MGPPP + + Q VI+R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKG+ +TVKLT++NRQATV++IPAASSLI+KALNEP RDRKKVKN+ H+GN+TL+QVI+IA+VMRERSMAR L+GTVKE+LGTCNS+GCTVNG+SPRDIQ+GI +GE+VIPDE
Sbjct: 1 MGPPP-SNDVQIVIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGMNVTVKLTVVNRQATVTMIPAASSLIMKALNEPVRDRKKVKNVVHNGNITLEQVIDIAKVMRERSMARKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVVIPDE 164
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
A0A7S1E7R7_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7R7_9STRA)
HSP 1 Score: 252 bits (644), Expect = 1.060e-79
Identity = 118/165 (71.52%), Postives = 148/165 (89.70%), Query Frame = 1
Query: 16 TMGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPD 510
TMGPPP + + + VI+R +GGE+G+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKKVKN+KHDGN+ LDQ+IEIAR MRERSMA+ LAGTVKE+LGTCNS+GCTVNG+SPRD+Q I +GE+ IP+
Sbjct: 15 TMGPPP-SDDVKIVIMRTVGGEIGSASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVKHDGNIALDQIIEIARQMRERSMAKKLAGTVKEILGTCNSIGCTVNGESPRDLQQMIDDGEVEIPE 178
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
A0A7R9U1B9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B9_9STRA)
HSP 1 Score: 251 bits (641), Expect = 3.800e-79
Identity = 117/165 (70.91%), Postives = 146/165 (88.48%), Query Frame = 1
Query: 19 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
MGPPPP GE + VI+RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+ T +WKGL +TVKL ++NRQATVSVIP++SSL++KALNEP RDRKKVK++ HDGN+TLDQVI++AR+MRERSMART+ GTVKE+LGTC S+GCTVNG+ P+ +Q I++GE+ I DE
Sbjct: 22 MGPPPPAGEEKVVIMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKAATMDWKGLAVTVKLVVVNRQATVSVIPSSSSLVMKALNEPPRDRKKVKHVVHDGNITLDQVIDVARIMRERSMARTMGGTVKEILGTCVSIGCTVNGEHPKTLQQQITDGELEIADE 186
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
A0A7S3PV60_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV60_9STRA)
HSP 1 Score: 249 bits (636), Expect = 1.030e-78
Identity = 119/165 (72.12%), Postives = 146/165 (88.48%), Query Frame = 1
Query: 19 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
MGPPP + E + VI+R +GGEV ++LAPK+GPLGLSPKK+GEDIQK T++WKGL +TVKLT++NRQATV++IP++SSLI+KALNEP RDRKKVKN+ HDGN+TLDQVIEIAR MR+RS A+ L+GTVKEMLGTCNS+GCTVNG SPRD+Q+GI +GEI IP E
Sbjct: 1 MGPPP-SDEVKIVIMRTVGGEVAAASSLAPKIGPLGLSPKKVGEDIQKATKDWKGLSVTVKLTVVNRQATVTMIPSSSSLIMKALNEPVRDRKKVKNVTHDGNLTLDQVIEIARAMRDRSCAKELSGTVKEMLGTCNSIGCTVNGDSPRDVQAGIDDGEIEIPAE 164
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
B8BTS3_THAPS (RL12, ribosomal protein 11 60S large ribosomal subunit n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8BTS3_THAPS)
HSP 1 Score: 249 bits (635), Expect = 1.450e-78
Identity = 116/161 (72.05%), Postives = 146/161 (90.68%), Query Frame = 1
Query: 31 PPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
PP+ + + VI+R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKKVKN+ H+GN+TLDQVI+IAR MRERSMA+ LAGTVKE+LGT NS+GCTVNG+SPRDIQ+GI +GE+ IP+E
Sbjct: 4 PPSDDVKIVIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVVHNGNITLDQVIDIARQMRERSMAKKLAGTVKEILGTANSIGCTVNGESPRDIQAGIDDGEVEIPEE 164
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
A0A7S1BV82_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV82_9STRA)
HSP 1 Score: 245 bits (625), Expect = 4.660e-77
Identity = 117/165 (70.91%), Postives = 146/165 (88.48%), Query Frame = 1
Query: 19 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
MGPPP + + + VI+R +GGEVG ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKK KNI H+GN+TLDQVI+IAR MRERSMA+ L+GTVKE+LGT NS+GCTVNG++PRD+QS I +GE+ IPDE
Sbjct: 1 MGPPP-SDDVKIVIMRTVGGEVGAASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKEKNIVHNGNITLDQVIDIARQMRERSMAKELSGTVKEILGTANSIGCTVNGENPRDVQSAIDDGEVEIPDE 164
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
A0A7S1XKH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKH5_9STRA)
HSP 1 Score: 246 bits (627), Expect = 6.170e-77
Identity = 115/161 (71.43%), Postives = 145/161 (90.06%), Query Frame = 1
Query: 31 PPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
PP GE + V++RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+K T +WKGL +TVKL ++NRQATVSVIP+ASSL++KALNEP RDRKKVK++ HDGN+TLDQVI++ARVMRERSMAR L+GTVKE+LGTC S+GC+VNG++PR +Q I++GE+ IP+E
Sbjct: 33 PPAGEEKIVVMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKKATMDWKGLSVTVKLVVVNRQATVSVIPSASSLVMKALNEPVRDRKKVKHVVHDGNITLDQVIDVARVMRERSMARELSGTVKEILGTCVSIGCSVNGENPRTLQQQITDGELEIPEE 193
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Match:
K0TFA0_THAOC (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=K0TFA0_THAOC)
HSP 1 Score: 243 bits (621), Expect = 1.870e-76
Identity = 114/161 (70.81%), Postives = 145/161 (90.06%), Query Frame = 1
Query: 31 PPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 513
PP+ + + VI+R +GGEV +ALAPK+GPLGLSPKK+GEDI K T++WKGL +TVKLT++NRQA+VS+IP++SSLI+KALNEP RDRKKVKNI H+GN+TLDQVI+IA+ MRERSMA+ L+GTVKE+LGTCNS+GCTVNG+SPRDIQ+GI +GE+ IP+E
Sbjct: 4 PPSDDVKIVIMRTVGGEVAPASALAPKIGPLGLSPKKVGEDIMKATKDWKGLNVTVKLTVVNRQASVSMIPSSSSLIMKALNEPYRDRKKVKNIVHNGNLTLDQVIDIAKQMRERSMAKKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVEIPEE 164
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.786.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.99e-108 / Id = 100.00 Expect = 5.25e-90 / Id = 83.64 Expect = 8.69e-83 / Id = 73.94 Expect = 1.06e-79 / Id = 71.52 Expect = 3.80e-79 / Id = 70.91 Expect = 1.03e-78 / Id = 72.12 Expect = 1.45e-78 / Id = 72.05 Expect = 4.66e-77 / Id = 70.91 Expect = 6.17e-77 / Id = 71.43 Expect = 1.87e-76 / Id = 70.81 Sequence D7FPM0_ECTSI A0A835YTI9_9STRA A0A7S2UAZ7_9STRA A0A7S1E7R7_9STRA A0A7R9U1B9_9STRA A0A7S3PV60_9STRA B8BTS3_THAPS A0A7S1BV82_9STRA A0A7S1XKH5_9STRA K0TFA0_THAOC
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Stop 1
Start 1
Seed ortholog score 324.3
Seed ortholog evalue 3.3e-86
Seed eggNOG ortholog 2880.D7FPM0
Preferred name rpl12
Model size 1239
KEGG ko ko:K02870
KEGG Pathway ko03010,map03010
KEGG Module M00177
Hectar predicted targeting category other localisation
GOs GO:0000027,GO:0000381,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0015934,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031323,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048024,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904
Exons 5
EggNOG free text desc. ribosomal large subunit assembly
EggNOG OGs COG0080@1,KOG0886@2759
Ec32 ortholog description 60S ribosomal protein L12
Ec32 ortholog Ec-16_001460.1
Cds size 498
COG Functional cat. J
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE br01610,ko00000,ko00001,ko00002,ko03011
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348730.9451876-UTR-Ecto-sp6_S_contig101:195417..195435 1682348730.9451876-UTR-Ecto-sp6_S_contig101:195417..195435 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig101 195418..195435 +
1682348731.0064845-UTR-Ecto-sp6_S_contig101:199232..199955 1682348731.0064845-UTR-Ecto-sp6_S_contig101:199232..199955 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig101 199233..199955 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348730.9570262-CDS-Ecto-sp6_S_contig101:195435..195457 1682348730.9570262-CDS-Ecto-sp6_S_contig101:195435..195457 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 195436..195457 +
1682348730.9663785-CDS-Ecto-sp6_S_contig101:196522..196704 1682348730.9663785-CDS-Ecto-sp6_S_contig101:196522..196704 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 196523..196704 +
1682348730.9756372-CDS-Ecto-sp6_S_contig101:197697..197775 1682348730.9756372-CDS-Ecto-sp6_S_contig101:197697..197775 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 197698..197775 +
1682348730.9851723-CDS-Ecto-sp6_S_contig101:198526..198700 1682348730.9851723-CDS-Ecto-sp6_S_contig101:198526..198700 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 198527..198700 +
1682348730.9947064-CDS-Ecto-sp6_S_contig101:199190..199232 1682348730.9947064-CDS-Ecto-sp6_S_contig101:199190..199232 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 199191..199232 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.786.1
>prot_Ecto-sp6_S_contig101.786.1 ID=prot_Ecto-sp6_S_contig101.786.1|Name=mRNA_Ecto-sp6_S_contig101.786.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=166bp
MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNT QEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKH DGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRD IQSGISEGEIVIPDE* back to top mRNA from alignment at Ecto-sp6_S_contig101:195418..199955+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.786.1 ID=mRNA_Ecto-sp6_S_contig101.786.1|Name=mRNA_Ecto-sp6_S_contig101.786.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4538bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:195418..199955+ (Ectocarpus species6 EcLAC_371)ATCCATCCTCTATAAACA ATGGGCCCCCCTCCGCCGACTG GTGAGTGAGA
GAAACGAGTCGGTCGGGCTGTGTGTAAGTTTGTGAAAGCAAGGTGGAGAA
CGGCGAGCAACCATGCGTTGCTGTTGTGTGGGGTAGGAGAGACGGAGAGG
CAGGGAACACGCTTCACGGGAGTAACCTTGTGACGGGCTGGAGGTTGCAA
GCTCACGGGAACGCGTTTGTGCGTGGTCTTACACCTCTGCCCCTACCCCT
CTTGCTATCCCATCACTGTTTCTTGTTGACAACACCGCACCCAATGATTA
CCCCATGCTGTGGGGGGTGGAGCTTGTGTGCCTCATCATGGTTTGTTTGC
CAACACACACCCTTGGCGCGGCCACGACCGGCCGGTCCGATTTTGCGGGT
GCACCTTTGCCTTTCCCGTTGTGGTTTGTTCACGGAGCTCGATTGTGGAC
GTCGAATTGCTTGGAATGATGCTCCCCCACACAGATATCAACATGCTCCC
TAGGTATATCAAAATCAGCATGATAGCAGGGTTCCCAAGGTCCACAAAGA
ACAAATACACCGCAAGTAGCCCATTGCAAGGGGAGGCCCATACGCTCGCA
CCACTTGGCTCGGGAAGACTTATTTGGCGGTATCGTATGTATTTGCAGCT
GAGGTGCTGCTGTGAAATCTGCTGAGCACGCCTCTCTTTTTTGTGCTGTT
TCTCCCTGGGCTGGAAAGTCCACGTTGGTGCCATTCCGCAAACCATTGCT
CAACTGAAGCAGAGATCGGGGCTCGAGACCCCCGAAACGTCGCTGAGCCA
TCTATGGCAGGGTCGTGAAGTACTTATGAATACGGCGTAGGATTGGAATG
ATTCCGTTGAGCATGAGCAACACAACCAATATAAATAACGAGGGGTTTAA
ATGAAACCATCAAGCTGTGCACAAGAAAACACGGTACCTCAAGAGTGCAG
AGTAAAGCAGTCAAGTGACAAAAGCCGGGAGTGCAGGCGAGCTTGATCCA
ACCAACAGCCTGTTTGTTGAACCAAGCATGACGCTTCCACAATATATGAT
TCCTGTTACAGTAATACCAATGTTTCTTTCCATCCGTTCTTTCTCTTTTG
TTAAGGTGAGGCACAGTATGTGATCCTTAGGGCGATCGGGGGTGAGGTAG
GAAACACGGCCGCCCTGGCCCCCAAGCTGGGTCCTCTGGGTCTCTCGCCC
AAGAAGATCGGCGAGGACATCCAGAAGAACACCCAGGAGTGGAAGGGGCT
CCCGATCACGGTCAAGCTCACCATCATCAACCGTCAG GTCGGTGTCCGCT
GCTGCTTGTGTATTGCTTGTTGTCTTCGTCCGGTGCTGCGATAGGTTTCG
TGTTGTTTGCCGCTTGACCTTCTGTTCTTGGTGGCGGTCATGGTTGCTGT
CCGTATTCACTTCCTATGGTTGTTTCTAGCTTCGAACCGAGAGCATACCA
ATCATGCAAAGCAACCAGCAATCCGCTTGGTGTTGAGAGTACAAAAGTAG
CCGCGTTGTTACGGTTGGACGGAACCACATTTTTCGAATAGCCCGCAAGC
GACGCCCGCCGCGCCTTGATTTCTCTCGCGCGTGTGGGGTCGCTGCAATT
CTGATTGCGCGAGGCGAGAAGCAATCCGGGGGGGAACCTAACATTCGTTC
GTCTGGCTCCCCCGGCCGGGCTTGGCCACACCGGACTGGTTATTACAACC
TTGTGTCTGAATGTGGAATGTACCTGGCCTACATACATGAGCTTTACGTA
GCTCAGTTGGACCACACTTGATTTTGTGCGGCGTGCTCAACAGCAGTTTG
CACTGCTTTGCGAGTTTCTTTCTCGCGCACCGGGTTGTAGACATGAGGTT
TTGTATGTTGGAACTGGCTGTCATTTTCTCTTCTTTTTCTGCTGTAACGG
GCGGGCTAAACTCGTAGATCACGCGGAGGCTGCGCACTCTCTGCTGTCTT
GCGTTTGTgGGACACGTCTGAGAGACCACGGTCGATCTACTCGCTGTGCG
AGTGACACGCGACTGTCCCAACTCTTGTCGCCTTGGCTTTTGTCGCGCTC
ACCGGTGGCTCTTGCCACTGTTTTCCGCGCTTCAACGCCTTTCGCGGCGT
TTTTGGTGGATGGCGAAAATGCGCGCGTGCGTGTGACCAACATCGTCGAA
ATCTAACGTTCCTCTATTTCTGTGTTCGCCGATTCGTCTTTCGTCTGTTG
TTGTCTGGCAATGCTGCCGTCACCACCGCTGCTGCTGTTGGCACTGTTGT
CTGTTTTCTCCCACCCACGTACTTCTCCAGGCGACCGTGTCTGTGATCCC
CGCCGCTTCGTCGCTGATCCTCAAGGCTCTCAACGAGCCCGAACGCGACC
GCAAGAAG GTGCGTCATGCGCCTGTCCGCTTCCGCCGTCGTGTTGTGTCG
ATGAGAGCTTCGTTTGTAGATGGGGAGCCATTTTGTGGTTATCCAACCGT
CCGAGATGAACATGTTTGGGCACTTTGCAACCAAAAATGAGCAGCGCCAA
TACGAGTTTTGATGACGGCGGTTCGTGGTCATCCAACAACCGGATGGGCA
CTTGTTACGTATTAGTGGATGGTACCATAATTGCCTCAAGAAGGCATCGT
GGAAGATTTAGTTCCTCGGATGTAGAGCGGACCTAGGAACGTTCCTGACT
TGGGCTGACGAACGGTTGAATGTTTGACGTACTCAGACCTTCAATGTTGT
TTCACGACAAGCGTACAAGAAGGCAATGGAGAGAACGCCCGCAAGCGATG
CCCGCCGCGCCTTGATTTCTCTCGCGCGTGTGGGGGTCGCTGCAATTCTG
ATTGCGCGAGGCGAGAAGCAATCCGGGGGGGAACCTAACATTCGTTCGTC
TGGCTCCCCCGGCCGGGCTTGGCCACACCGGACTGGTTTTAACAACCCTG
TGTCTGAATGTGGAATGTACCTGGCCTACATATCCTGCAGCGTTGTTCAC
CAGATTGTACTTTGTTTGGTTGTTTTTTGCCACCCTTGTCCCCGTCGCGT
CATGCCCATTTCGCTGTCGCTCATCTTGTGGCGACCCTAGCAGATGGCCC
CTCCCTCCGCCTAACGCGTGTGGGGTGCTTGCGTGGTTCATGTTGTATTG
ATTTGACAGGTGAAGAACATCAAGCACGATGGCAACGTCACCCTCGACCA
GGTGATCGAGATCGCCCGCGTCATGCGCGAGAGGTCCATGGCGCGCACGC
TCGCCGGAACCGTCAAGGAAATGCTCGGCACCTGCAACTCCGTCGGCTGC
ACCGTCAACGGACAGTCTCCCCGCGACATCCAG GTATTTTTTTTTTCGTC
GGTCGTGGTGACATTTGTACGACACCTTACCGAACGAAAACACGGTCATG
AAAGGCCTTGTTGTGCGTCGTCGTGCCTTCTTTTCTGATAGTTGTTTCAA
GCCATCCCATTCATCACTCCGTAAGGTGAGTACACAATTCAATCGTCACC
CCATTTCATGTTCGTCAACATGCGGCGTTACTTTTGTTGACGCGAGCGGT
GATACCAGAGTGTGTCCGGTCGACGCTCGACCCACGAAGGGGTGTCGCCT
GTCATCAACTGACCAAACCCCCCTCATCTCTCCCTCTGTCGTTCCCGCGC
CGTGTGTGTTCGCTGTCGCCGGCCATCCTCACCTCTTCATTATTTTTGGG
ATGTGCGTGGCCCACCTGCTGCTCCCTGGATGCTCGTTGAATTTGGGGCG
CGTACGTCTGTTGTTGACCCGCTCCGGCGGGACTGTCAAAATCTAAATCG
GATTCGGGCGTTTGGAAACACAGAGCGGCATCAGCGAGGGAGAGATTGTC
ATCCCCGACGAGTAG ACTGGGTTTCGCTTTTTCTGTGTTTCGACATGGTT
TGATTTCGGAGAGAGGGGTGTCTTGTCTCGCTTGAAACCTTCACCTTTTC
GCGTGGGAATAAAAAGAGTATAAAAAACATGTTCTGGCTTGTGGCCGGAT
GGTTTGCTGCGCTCAGGCTTTTTTGTCGACGCAAGAAGTGACGCATCTGG
TGCGGGGGTTGCCATCTGGACCATCGTTCGTCCGCCCGTTTGCTATCACA
TTATTTTGGCCAAACGGTTGGGTTGCTTGACGATGGGCAGCACATGTTGC
GCTGCGTGTGCACTTTGAATGCCCAGCGTTGCGGACGGGTCAATGTGCAA
GTCACAGATGGCATGCACTGCTGGTTCTTTCAGCTAGGCGGCCGCTTGAC
CGTACCTACCTCGACAGCTACAAGAGCAACAGCAGCAGTACCACACTGTC
CCCCACTCAATCAATATTCATGCTGCTGTTGCGGAGTCTATCTCGCCCCG
CGTAGGAAATGACAGCCTGAAACATGTCCAACCGTGTCGCGAGACCTGGA
CGTCCAAGTTAGCCCTCCCTGTGCAATGAGTTTGCGAGGCCCCGAGTTGG
CCGAGTGCGGCGAGCACCCCCCGTGAGTCTCAAAAGGAAACCCGATAATC
GGGCATGCGCGTTACACACAGACGGACGTTCATCTCGCGCCGCCGAGCCC
AACGGAGCATCCGTCTGCATTTTTGTGGCCTTCGAAGA back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:195418..199955+
>mRNA_Ecto-sp6_S_contig101.786.1 ID=mRNA_Ecto-sp6_S_contig101.786.1|Name=mRNA_Ecto-sp6_S_contig101.786.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=498bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:195418..199955+ (Ectocarpus species6 EcLAC_371) ATGGGCCCCCCTCCGCCGACTGGTGAGGCACAGTATGTGATCCTTAGGGC GATCGGGGGTGAGGTAGGAAACACGGCCGCCCTGGCCCCCAAGCTGGGTC CTCTGGGTCTCTCGCCCAAGAAGATCGGCGAGGACATCCAGAAGAACACC CAGGAGTGGAAGGGGCTCCCGATCACGGTCAAGCTCACCATCATCAACCG TCAGGCGACCGTGTCTGTGATCCCCGCCGCTTCGTCGCTGATCCTCAAGG CTCTCAACGAGCCCGAACGCGACCGCAAGAAGGTGAAGAACATCAAGCAC GATGGCAACGTCACCCTCGACCAGGTGATCGAGATCGCCCGCGTCATGCG CGAGAGGTCCATGGCGCGCACGCTCGCCGGAACCGTCAAGGAAATGCTCG GCACCTGCAACTCCGTCGGCTGCACCGTCAACGGACAGTCTCCCCGCGAC ATCCAGAGCGGCATCAGCGAGGGAGAGATTGTCATCCCCGACGAGTAG back to top