prot_Ecto-sp6_S_contig101.770.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig101.770.1
Unique Nameprot_Ecto-sp6_S_contig101.770.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length200
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match: A0A6H5K1Z7_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Z7_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 7.590e-67
Identity = 146/163 (89.57%), Postives = 147/163 (90.18%), Query Frame = 0
Query:   24 RPAGAGAATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMARQAAAQXXXXXXXXXXXXXDAPMTSPAVKGKGKAPAHEGSGGGRPGARRNPSCGGQPQLVV 186
            RPAGAGAATAT EKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRM LLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMAR AAAQXXXXXXXXXXXXX APMT P VKGKGKAPAHEGSGGGR G R      G P +VV
Sbjct:  296 RPAGAGAATATSEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMILLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMAR-AAAQXXXXXXXXXXXXX-APMTLPVVKGKGKAPAHEGSGGGRSGGRA-----GIPPVVV 451          
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match: D7FHV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV8_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 6.810e-38
Identity = 106/186 (56.99%), Postives = 107/186 (57.53%), Query Frame = 0
Query:    1 MEVDSPPXXXXXXXXXXXXXXXGRPAGAGAATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMARQAAAQXXXXXXXXXXXXXDAPMTSPAVKGKGKAPAHEGSGGGRPGARRNPSCGGQPQLVV 186
            MEVDSP XXXXXXXXXXXXXXX RPAGAGAATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQ                                                       QAAAQ             DAPMTSPAVKGKGKAPAHEGSGGGRPG R      G P +VV
Sbjct:   60 MEVDSPXXXXXXXXXXXXXXXXXRPAGAGAATATWEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQ-------------------------------------------------------QAAAQAKQDEGEEAAEEEDAPMTSPAVKGKGKAPAHEGSGGGRPGGRA-----GIPPVVV 185          
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match: A0A7S1Z2K3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2K3_TRICV)

HSP 1 Score: 80.5 bits (197), Expect = 2.410e-14
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0
Query:   39 EWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVA 119
            E+V VP P+V   RLRLLCS+LRLE+C D SF +V T+   L +V  NR  +L+EL SVA+ LGA +  DL+SL  +L  A
Sbjct:  242 EYVDVPRPLVSPHRLRLLCSLLRLESCRDTSFVKVNTIARRLCRVEANRTCILRELASVAQGLGADAIRDLRSLSIRLSDA 322          
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match: A0A7S1VJ82_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJ82_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.540e-13
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 0
Query:   39 EWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLD 117
            E++ VP  V+  +RLRLLCSVL+LE+C D++F +V T+V  LS+V  NR  +L EL +VA +LGA +  +L++L+ ++D
Sbjct: 2193 EYIGVPRVVISQDRLRLLCSVLKLESCKDSAFTKVNTIVKRLSRVDANRGFILSELGTVAHALGADAIRELRALKIRMD 2271          
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match: A0A7S2QUU6_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUU6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.160e-12
Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   39 EWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSL 112
            ++VK P  VV   RLRLLC+VLR E C D+SF +V +++S LSKV  NR+TL++EL SVA++L + +T DL +L
Sbjct:  660 KYVKTPRTVVAARRLRLLCAVLREEVCKDDSFSKVLSIMSALSKVKANRITLVEELGSVAQNLSSDATTDLATL 733          
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Match: B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC)

HSP 1 Score: 72.4 bits (176), Expect = 2.770e-11
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   40 WVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLEQQLDVA 119
            WV+ P   +  ERL+ LCS+LR+E   DN+F +V T+V  L +V  NR  +L EL  VA SL + S HDL++L  ++D A
Sbjct: 3600 WVQAPGIEISPERLKRLCSILRMETFRDNAFSKVNTIVRRLCRVESNRGLVLAELAGVAHSLASDSIHDLRALRIRIDEA 3679          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K1Z7_9PHAE7.590e-6789.57HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHV8_ECTSI6.810e-3856.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1Z2K3_TRICV2.410e-1451.85Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S1VJ82_9STRA9.540e-1346.84Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2QUU6_9STRA4.160e-1252.70Hypothetical protein n=2 Tax=Triparma pacifica Tax... [more]
B7G082_PHATC2.770e-1145.00HECT-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig101contigEcto-sp6_S_contig101:1378..3678 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig101.770.1mRNA_Ecto-sp6_S_contig101.770.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig101 677..3708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig101.770.1 ID=prot_Ecto-sp6_S_contig101.770.1|Name=mRNA_Ecto-sp6_S_contig101.770.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=200bp
MEVDSPPPPAAAATAAATAAAAGRPAGAGAATATWEKYEWVKVPAPVVQH
ERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMTLLKELVSVAKS
LGAVSTHDLQSLEQQLDVAKRDAMARQAAAQAKQEEGEEEAEEEDAPMTS
PAVKGKGKAPAHEGSGGGRPGARRNPSCGGQPQLVVERAEAPAGVADPG*
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